FT-IR and HPLC analysis of silver fir (Abies alba Mill.) bark compounds from different geographical provenances

Fourier Transform Infrared Spectroscopy (FT-IR) and High-Performance Liquid Chromatography (HPLC) could be applied to study the provenance of wood, specifically the differentiation of wood resources, as well as the identification of chemical compounds that are connected to the changes that occur in wood as a result of drying treatments. To test this hypothesis, the bark of silver fir (Abies alba Mill.) from trees belonging to seven different geographical provenances was studied, using samples dried at three different temperatures (60, 80, and 100 °C). FT-IR spectroscopy revealed different band assignments in the mid-infrared region depending on fir provenances, whereas the vibrational bands of the biomass functional groups tended to shift to lower wavenumbers. Significant differences were identified between the chemical compounds in the bark depending on the provenances. The largest proportion of the total phenolics was represented by the epicatechin gallate, epicatechin, catechin, and procyanidin dimer B1. Exploratory data analysis was performed using principal component analysis (PCA), hierarchical clustering, and Pearson correlations. This allowed a comparative evaluation of the samples and interpret the findings according to the geographical provenances, respectively ecological conditions in the areas of origin, but also the influence of the drying temperatures of the samples on chemical compounds. The precipitation in the areas of origin decreased total phenolics in silver fir bark samples, and total phenolics differed not only due to the geographic provenance, but also due to drying temperature.

Tree barks for retrospective measurement and source appointment of airborne perfluoroalkyl and polyfluoroalkyl substances

Tree bark is a useful bioindicator of atmospheric pollution. It is specially suitable for airborne perfluoroalkyl and polyfluoroalkyl substances (PFASs) investigation due to persistence of ionic PFASs. The present work firstly systematically studied tree barks as a bioindicator of airborne PFASs. Comparison with the regular active and passive samplers found barks could produce long-term measurement of airborne PFASs, and could record the historical emission of PFASs with retrospective time frame as long as decades. Factors, e.g. tree type, trunk diameter, and sampling depth, can affect PFAS accumulation in barks, and these factors should be kept consistent during sampling. In a study area spatial distribution of airborne PFASs can be obtained by interpolation of bark results, and the concerned region can be located. Properties of the emission sources can be characterized, and the potential sources can be tracked based on the bark results. Their contributions can be further estimated by the source appointment strategies. In the economically and industrially developed study area of the present study, eight cities of southern Jiangsu Province of China, total ionic PFAS concentration of camphor bark samples collected in 34 sites was 0.44-359 ng/g dw (dry weight), dominated by perfluoroalkyl carboxylic acids (PFCAs). Two types of possible sources were characterized as with long-chained PFCAs and PFOA (perfluorooctanoic acid) as the main components respectively. The sources were appointed as fluoropolymer manufacturing and textile industries, the important PFAS application fields, and their relative contribution was estimated as 32.5% and 67.5% respectively. The present study can provide useful advice to the method framework of using barks for long-term occurrence investigation, concerned region location, and emission source appointment of airborne PFASs in a study area. Based on the bark results, effective strategies can be further made for PFAS pollution elimination and risk control.

Dynamic changes of endophytic bacteria in the bark and leaves of medicinal plant Eucommia ulmoides in different seasons

The bark and leaves of the Eucommia ulmoides Oliv. (E. ulmoides) have good medicinal value. Studies show endophytes play important roles in host medicinal plant secondary metabolite synthesis, with season being a key influencing factor. Therefore, we used 16 S rRNA to detect endophytic bacteria (EB) in E. ulmoides bark and leaves collected in winter, spring, summer, and autumn, and analyzed the contents of major active components respectively. The results showed that the species diversity and richness of EB of the E. ulmoides bark were higher than those of leaves in all seasons except fall. Among them, the higher species diversity and richness were found in the E. ulmoides bark in winter and spring. EB community structure differed significantly between medicinal tissues and seasons. Concurrently, the bark and leaves of E. ulmoides showed abundant characteristic EB across seasons. For active components, geniposidic acid showed a significant positive correlation with EB diversity and richness, while the opposite was true for aucubin. Additionally, some dominant EB exhibited close correlations with the accumulation of active components. Delftia, enriched in autumn, correlated significantly positively with aucubin. Notably, the impact of the same EB genera on active components differed across medicinal tissues. For example, Sphingomonas, enriched in summer, correlated significantly positively with pinoresinol diglucoside (PDG) in the bark, but with aucubin in the leaves. In summary, EB of E. ulmoides was demonstrated high seasonal dynamics and tissue specificity, with seasonal characteristic EB like Delftia and Sphingomonas correlating with the accumulation of active components in medicinal tissues.

Inhibition of pro-inflammatory cytokines by selected southern African medicinal plants in LPS-stimulated RAW 264.7 macrophages

ETHNOPHARMACOLOGICAL RELEVANCE

Bark is frequently used in southern African traditional medicine to treat inflammation, yet it remains to be rigorously examined for its immunological and anti-inflammatory activity.

AIM OF THE STUDY

Barks obtained from ten important and popular southern Africa plants were evaluated for their anti-inflammatory and immunomodulatory properties against the secretion of some pro-inflammatory cytokines (interleukin (IL)-1β, IL-6, tumour necrosis factor-α (TNF-α), and interferon-gamma (IFN-γ) as well as chemokines (monocyte chemoattractant protein 1 (MCP-1) and macrophage inflammatory protein (MIP)-2) in murine RAW 264.7 macrophages.

MATERIALS AND METHODS

The inhibitory effects of aqueous and ethanol extracts were determined using cytokine multiplex-bead assays in lipopolysaccharide (LPS)-stimulated and unstimulated RAW 264.7 cells.

RESULTS

Overall, the ethanol extracts were more potent cytokine inhibitors compared to the aqueous extracts. The LPS-stimulated cells treated with the ethanol extracts of Erythrina lysistemon Hutch., Pterocelastrus rostratus Walp. Syzygium cordatum Hochst. ex Krauss and Warburgia salutaris (G. Bertol.) Chiov., demonstrated significant (p < 0.005) inhibition up to 85% of IL-1β, IL-6, and TNF-α secretion compared to the LPS control. Additionally, P. rostratus and S. cordatum aqueous bark extracts substantially decreased the secretion of all the tested cytokines and chemokines. Chemical investigation of the S. cordatum extract resulted in the identification of four ellagic acid derivatives: ellagic acid 4-O-α-rhamnopyranoside (1), ellagic acid 4-O-α-4″-acetylrhamnopyranoside (2), 3-O-methylellagic acid 4'-O-α-3″-O-acetylrhamnopyranoside (3) and 3-O-methylellagic acid 4'-O-α-4″-O-acetylrhamnopyranoside (4), along with mixtures of ellagic acid 4-O-α-2″-acetylrhamnopyranoside (5), ellagic acid 4-O-α-3″-acetylrhamnopyranoside (6) and ellagic acid (7). Their structures were confirmed by mass spectrometry, NMR spectroscopy, and comparison with data from literature.

CONCLUSION

The cytokine inhibition properties of most of the medicinal plants screened herein are reported for the first time. Our results provide insights into the mechanism of action by which the selected southern African medicinal plants regulate inflammation.

Comparison of trace elements in tissue of beaver (Castor canadensis) and local vegetation from a rural region of southern Ontario, Canada

Beavers have been analyzed in several studies examining trace elements (TEs) in wildlife; however, most of these studies were undertaken in areas with known environmental pollutants. To understand and quantify natural enrichments of TEs in beaver tissue, samples of kidney, liver, muscle from 28 animals were compared with bark from 40 species of trees and shrubs, from the same, uncontaminated watershed. Pearson correlation and factor analysis show that conservative, lithophile elements such as Al, Ga, Th, and Y, all surrogates for mineral dust particles, explain 61% of the variation in the bark data. In contrast, Cd, Co, Cu, Mn, Mo, Ni, Rb, Se, Sr, and Tl in bark are independent of Al, and therefore most likely occur in non-mineral forms. Comparing tissue concentrations of beaver and bark, the organs are enriched in micronutrients such as Cu, Fe, Mo, Se, and Zn, but also non-essential, benign elements such as Cs and Rb, and potentially toxic elements such as Cd and Tl. Thus, the elements most enriched in beaver organs are those that apparently occur in biological form in the plant tissue. The elements enriched in these animals, relative to bark, appear to offer the most promise for monitoring environmental contamination by TEs using beavers. The majority of TEs of environmental relevance are most abundant in beaver kidney. However, monitoring studies must consider the variation in TE concentrations in beaver tissue, including those due to sex and age. Also, due consideration must be given to background concentrations of TEs in the vegetation composing the diet of the animals. The natural enrichment in the case of elements such as Cd, in beaver tissue relative to bark, is profound. These data establish critical baseline values for TEs in beavers in an unpolluted environment, thereby allowing for their use as model organisms in tracking how heavy metal pollutants may affect wildlife.

Nitrogen and phosphorus allocation in bark across diverse tree species

Understanding of nitrogen (N) and phosphorus (P) allocation patterns among various plant organs and tissues is crucial for gaining insights into plant growth and life-history strategies, as well as ecosystem nutrient cycles. However, there is limited information available regarding allocation strategies for N and P in bark (i.e., all tissues external to the vascular cambium), which is an indispensable and specialized secondary tissue system. This study presents analyses of a newly compiled and comprehensive data set comprising 1246 pairwise N-P observations across 335 tree species spanning 557 independent sampling sites worldwide. The aim is to explore the interspecific N and P stoichiometry of bark. The global geometric means for bark N and P concentrations, as well as N:P ratios, were 3.88 mg/g, 0.2 mg/g, and 19.38, respectively. However, these values varied significantly among different functional plant-groups and biomes. Across all 335 species, the N vs. P scaling exponent was 0.69 for bark, which is similar to the 2/3-power scaling relationship observed in leaves and twigs. However, the bark N vs. P scaling exponent differed among functional plant-groups, biomes, and local sites, indicating the absence of a "canonical" scaling exponent. The interactions of soil total N and P collectively accounted for the most significant variation in the bark scaling exponent among local sites. The results indicate that there is no "canonical" bark N vs. P scaling exponent, and that soil nutrient content is the most important factor influencing N and P allocation strategies in bark. These findings may hold significant implications for predicting plant nutrient allocation strategies in response to environmental changes.

Impacts of leaks and gas accumulation on closed chamber methods for measuring methane and carbon dioxide fluxes from tree stems

Accurate measurements of methane (CH4) and carbon dioxide (CO2) fluxes from tree stems are important for understanding greenhouse gas emissions. Closed chamber methods are commonly employed for this purpose; however, leaks between the chamber and the atmosphere as well as gas accumulation, known as the concentration buildup effect, can impact flux measurements significantly. In this study, we investigated the impacts of concentration buildup and leaks on semi-rigid closed chamber methods. Field measurements were conducted on six tree species, including three species from a Mexican mangrove ecosystem and three species from a Magellanic sub-Antarctic forest. Systematic observations revealed significant leak flow rates, ranging from 0.00 to 465 L h-1, with a median value of 1.25 ± 75.67 L h-1. We tested the efficacy of using cement to reduce leaks, achieving a leak flow rate reduction of 46-98 % without complete elimination. Our study also demonstrates a clear and substantial impact of concentration buildup on CH4 flux measurements, while CO2 flux measurements were relatively less affected across all tree species studied. Our results show that the combined effects of leaks and concentration buildup can lead to an underestimation of CH4 emissions by an average of 40 ± 20 % and CO2 emissions by 22 ± 22 %, depending on the bark roughness. Based on these findings, we recall a straightforward yet effective method to minimize experimental errors associated with these phenomena, previously established, and reiterated in the current context, for calculating emissions that considers effects of leaks and concentration buildup, while eliminating the need for separate determinations of these phenomena. Overall, the results, combined with a literature review, suggest that our current estimates of GHG flux from tree stems are currently underestimated.

The removal of micropollutants from treated effluent by batch-operated pilot-scale constructed wetlands

Micropollutants (MPs), such as pharmaceuticals and antibiotics, are present in the environment at low concentrations (ng/L-μg/L). A constructed wetland (CW) is a nature-based wastewater treatment technology, which can be used to remove MPs from wastewater treatment plant effluent. This study aimed to improve MP removal of CWs by optimizing the design of batch-operated CW. Three pilot-scale CWs were built to study the effect of two design-features: the use of a support matrix (a mixture of bark and biochar) and continuous aeration. The use of bark-biochar as support matrix increased the removal of 11 of 12 studied MPs compared to the CW filled with conventional material sand. The highest improved removal by the addition of bark-biochar was more than 40% (median) for irbesartan, carbamazepine, hydrochlorothiazide and benzotriazole. Aerating the bed of the bark-biochar CW did not change MP removal. Besides, the presence of bark-biochar also enhanced the removal of total nitrogen during 10 months of operation, but no improvement was observed on the total organic carbon and total phosphorus removal. Considering the application in a batch-operated CW, MP removal can be greatly enhanced by replacing sand with bark-biochar that will act as MP adsorbing matrix.

Comparing anatomy, chemical composition, and water permeability of suberized organs in five plant species: wax makes the difference

The efficiency of suberized plant/environment interfaces as transpiration barriers is not established by the suberin polymer but by the wax molecules sorbed to the suberin polymer. Suberized cell walls formed as barriers at the plant/soil or plant/atmosphere interface in various plant organs (soil-grown roots, aerial roots, tubers, and bark) were enzymatically isolated from five different plant species (Clivia miniata, Monstera deliciosa, Solanum tuberosum, Manihot esculenta, and Malus domestica). Anatomy, chemical composition and efficiency as transpiration barriers (water loss in m s^-1) of the different suberized cell wall samples were quantified. Results clearly indicated that there was no correlation between barrier properties of the suberized interfaces and the number of suberized cell layers, the amount of soluble wax and the amounts of suberin. Suberized interfaces of C. miniata roots, M. esculenta roots, and M. domestica bark periderms formed poor or hardly any transpiration barrier. Permeances varying between 1.1 and 5.1 × 10^-8 m s^-1 were very close to the permeance of water (7.4 × 10^-8 m s^-1) evaporating from a water/atmosphere interface. Suberized interfaces of aerial roots of M. deliciosa and tubers of S. tuberosum formed reasonable transpiration barriers with permeances varying between 7.4 × 10^-10 and 4.2 × 10^-9 m s^-1, which were similar to the upper range of permeances measured with isolated cuticles (about 10^-9 m s^-1). Upon wax extraction, permeances of M. deliciosa and S. tuberosum increased nearly tenfold, which proves the importance of wax establishing a transpiration barrier. Finally, highly opposite results obtained with M. esculenta and S. tuberosum periderms are discussed in relation to their agronomical importance for postharvest losses and tuber storage.

Analysis of the transcriptome of the needles and bark of Pinus radiata induced by bark stripping and methyl jasmonate

BACKGROUND

Plants are attacked by diverse insect and mammalian herbivores and respond with different physical and chemical defences. Transcriptional changes underlie these phenotypic changes. Simulated herbivory has been used to study the transcriptional and other early regulation events of these plant responses. In this study, constitutive and induced transcriptional responses to artificial bark stripping are compared in the needles and the bark of Pinus radiata to the responses from application of the plant stressor, methyl jasmonate. The time progression of the responses was assessed over a 4-week period.

RESULTS

Of the 6312 unique transcripts studied, 86.6% were differentially expressed between the needles and the bark prior to treatment. The most abundant constitutive transcripts were related to defence and photosynthesis and their expression did not differ between the needles and the bark. While no differential expression of transcripts were detected in the needles following bark stripping, in the bark this treatment caused an up-regulation and down-regulation of genes associated with primary and secondary metabolism. Methyl jasmonate treatment caused differential expression of transcripts in both the bark and the needles, with individual genes related to primary metabolism more responsive than those associated with secondary metabolism. The up-regulation of genes related to sugar break-down and the repression of genes related with photosynthesis, following both treatments was consistent with the strong down-regulation of sugars that has been observed in the same population. Relative to the control, the treatments caused a differential expression of genes involved in signalling, photosynthesis, carbohydrate and lipid metabolism as well as defence and water stress. However, non-overlapping transcripts were detected between the needles and the bark, between treatments and at different times of assessment. Methyl jasmonate induced more transcriptional responses in the bark than bark stripping, although the peak of expression following both treatments was detected 7 days post treatment application. The effects of bark stripping were localised, and no systemic changes were detected in the needles.

CONCLUSION

There are constitutive and induced differences in the needle and bark transcriptome of Pinus radiata. Some expression responses to bark stripping may differ from other biotic and abiotic stresses, which contributes to the understanding of plant molecular responses to diverse stresses. Whether the gene expression changes are heritable and how they differ between resistant and susceptible families identified in earlier studies needs further investigation.

Multistage fractionation of pine bark by liquid and supercritical carbon dioxide

Multistage fractionation of pine bark was performed using subcritical and supercritical CO₂ at increasing pressures and temperatures. In total, seven fractions were collected, which demonstrated different enrichments of families of compounds. In particular, subcritical CO₂ yielded 41% of the total extract in which unsaturated fatty acids represented the most abundant family. The subsequent five supercritical steps increased the recovery of sterol esters, wax esters and resin acids at higher temperatures and pressures, reaching 80% of the total extractable mass. In the last step, using ethanol as a co-solvent, an additional 20% of extract was recovered, which was enriched with phenolics and glycerol. A full characterisation of the extracts was accomplished by high-temperature GC-MS/FID using four internal standards, which were representative of the main classes of compounds contained in the pine bark extract.

Barks from avocado trees of different geographic locations have consistent microbial communities

Bark is a permanent surface for microbial colonization at the interface of trees and the surrounding air, but little is known about its microbial communities. We used shotgun metagenomic sequencing to analyze the bark microbiomes of avocado trees from two orchards, and compared one of them to rhizospheric soil. It was shown that the microbial communities of avocado bark have a well-defined taxonomic structure, with consistent patterns of abundance of bacteria, fungi, and archaea, even in trees from two different locations. Bark microbial communities were distinct from rhizospheric soil, although they showed overlap in some taxa. Thus, avocado bark is a well-defined environment, providing niches for specific taxonomic groups, many of which are also found in other aerial plant tissues. The present in-depth characterization of bark microbial communities can form a basis for their future manipulation for agronomical purposes.

Roll-to-roll layer-by-layer assembly bark-shaped carbon nanotube/Ti3C2Tx MXene textiles for wearable electronics

Smart wearable electronics have drawn increasing attention for their potential applications in personal thermal management, human health monitoring, portable energy conversion/storage, electronic skin and so on. However, it is still a critical challenge to fabricate the multifunctional textiles with tunable morphology and performance while performing well in flexibility, air permeability, wearing comfortability. Herein, we develop a novel roll-to-roll layer-by-layer assembly strategy to construct bark-shaped carbon nanotube (CNT)/Ti₃C₂T_x MXene composite film on the fiber surface. The fabricated bark-shaped CNT/MXene decorated fabrics (CMFs) exhibit good flexibility, air permeability and electrical conductivity (sheet resistance, 6.6 Ω/□). In addition, the CMFs demonstrate good electrothermal performance (70.9 °C, 5 V), electromagnetic interference (EMI) shielding performance (EMI shielding effectiveness, 30.0 dB under X-Brand), and high sensitivity as the flexible piezoresistive sensors for monitoring the human motions. Importantly, our CMFs show distinctive EMI shielding mechanism, where a great proportion of incident electromagnetic microwaves are reflected by the bark-shaped CNT/MXene films owing to the multi-interface scattering effects. This work may provide a new strategy for the fabrication of multifunctional textile-based electronics and pave the way for smart wearable electronics.

Assessment and comparison of phytochemicals and antioxidant properties from various parts of the Australian maroon bush (Scaevola spinescens)

Scaevola spinescens is endemic to Australia and traditionally used as a medicinal plant. While its bioactive compounds have been studied, their concentrations in different parts of the plant have not been reported. This study compared total phenolic content (TPC), flavonoids, saponins and antioxidant properties, as well as major individual phytochemical compounds in the whole root, root bark, root wood, whole stem, stem bark, stem wood, and leaf of S. spinescens. The results showed the leaf had significantly highest concentrations of TPC followed by the root bark and stem bark (47.34, 12.24 and 10.20 mg GAE/g, respectively). Flavonoids concentrations were also significantly higher in the leaf compared to the root bark and stem bark (20.95, 6.22 and 4.19 mg CE/g, respectively). For saponins, the root bark contained significantly highest concentrations (112.58 mg EE/g). Luteolin 7-glucoside was isolated and identified in the leaf of S. spinescens. Eight major compounds were identified with the leaf displaying the highest diversity of major compounds, and in higher concentrations, compared to the other plant constituents. As the leaf and root bark contained the highest concentrations of phytochemicals, these plant parts are recommended as starting material for future studies, to further isolate and identify the major compounds from S. spinescens and investigate their biological properties for use in pharmaceutical and food applications.

Atmospheric particulate represents a source of C8-C12 perfluoroalkyl carboxylates and 10:2 fluorotelomer alcohol in tree bark

In this study, we analyzed 30 legacy and emerging poly- and perfluoroalkyl substances (PFASs) in paired atmospheric particulate and bark samples collected around a Chinese fluorochemical manufacturing park (FMP), with the aim to explore the sources of PFASs in tree bark. The results showed that PFASs in atmospheric particulate and tree bark samples were consistently dominated by perfluorooctanoate (mean 73 ng/g; 44 pg/m3), perfluorohexanoate (47 ng/g; 36 pg/m3), perfluorononanoate (9.1 ng/g; 8.8 pg/m3), and 10:2 fluorotelomer alcohol (10:2 FTOH; 5.6 ng/g; 12 pg/m3). Spatially, concentrations of C8-C12 perfluoroalkyl carboxylates (PFCAs) and 10:2 FTOH all showed a similar and exponentially decreased trend in both bark and atmospheric particulate samples with the increasing distance from the FMP. For the first time, we observed strongly significant (Spearman's correlation coefficient = 0.53-0.79, p < 0.01) correlations between bark and atmospheric particulate concentrations for C8-C12 PFCAs and 10:2 FTOH over 1-2 orders of magnitude, suggesting that the continues trapping of atmospheric particulates resulted in the accumulation of these compounds in bark. Overall, this study provides the first evidence that atmospheric particulate is an obvious source of C8-C12 PFCAs and 10:2 FTOH in tree bark. This result may further contribute to the application of tree bark as an indicator of certain PFASs in atmospheric particulate.

Using tree cores to evaluate historic atmospheric concentrations and trends of polycyclic aromatic compounds in the Oil Sands region of Alberta, Canada

Tree cores and bark were sampled from jack pine trees at 18 sites in the Athabasca Oil Sands Region (AOSR) of Alberta, Canada, to investigate spatial and temporal trends of polycyclic aromatic compounds (PACs). Spatial trends were investigated in the bark samples, where ΣPAC concentrations ranged from 75 to 3615 ng/g. Highest concentrations were observed from trees within 40 km of the nearest mining or upgrading facility perimeter fence, in line with previous deposition studies in the AOSR. The sampled tree cores were separated into segments representing 5 years of growth/atmospheric collection by counting tree rings. A significant increase in PAC concentrations over the lifetime of the tree was observed at sites with the highest PAC concentrations, and the average % increase in concentration from 1970 to 2015 was in line with average % growth in bitumen extraction in the AOSR. Finally, the concentrations in the tree core segments representing collection from 2010 to 2015 were converted into an atmospheric PAC concentration using previously published wood-air partition coefficients. The calculated atmospheric concentrations were within the same range as concentrations reported from the passive atmospheric sampling network in this region. The importance of site location is highlighted, with forest edge sites providing an improved comparison for atmospheric exposure and deposition. This is the first study to use tree cores to calculate an atmospheric concentration of PACs, demonstrating the applicability of this methodology for providing historic atmospheric data.

Alternative sorption filter materials effectively remove non-particulate organic pollutants from stormwater

Urban runoff contains a mixture of both particulate and non-particulate organic pollutants (OPs). Hydrophobic OPs such as higher petroleum hydrocarbons, phthalates, and polycyclic organic hydrocarbons (PAHs) are not exclusively bound to particles, but also present in runoff in colloidal and truly dissolved forms. These hydrophobic compounds can also form nano- and microsized emulsions that may carry pollutants in stormwater. Hence, it is of great importance to develop treatment technologies such as sorption filters that can remove non-particulate OPs from contaminated stormwater. A pilot plant using column bed-filters of sand as a pre-filter, in combination with granulated activated carbon, Sphagnum peat or Pinus sylvestris bark, was used to investigate the removal of non-particulate OPs from urban stormwater. Samples from the filter effluents were collected weekly; during or after rain events; and during stress tests when incoming water was spiked with contaminated sediment and petrol or diesel. All sorption filters showed efficient reduction of aliphatic diesel hydrocarbons C₁₆-C₃₅, benzene, and the PAHs phenanthrene, fluoranthene, and pyrene during most of the operation time, which was 18 months. During the stress test events, all sorption filters showed 100% reduction of PAH-16, petrol and diesel aliphatics C₅-C₃₅. All sorption filters released DOC and nanoparticles, which may explain some of the transportation of OPs through the filter beds. The recommendation is to use a combination of sand pre-filtration and all the studied sorption materials in stormwater filters in series, to achieve effective removal of different types of OPs. It is also important to improve the hydraulic conditions to obtain sufficient water flows through the filters.

Antiviral, antifungal, and insecticidal activities of Eucalyptus bark extract: HPLC analysis of polyphenolic compounds

In this study, the antiviral, antifungal, and insecticidal and HPLC analysis of polyphenolic compounds of Eucaluptus camaldulensis Dehnh. bark extract (ECBE) were evaluated. Three fungi, namely Fusarium culmorum MN398395, Rhizoctonia solani MN398397, and Botrytis cinerea MN398399 were used to colonize wood blocks of chinaberry that was previously treated with different concentrations of ECBE at 1%, 2%, and 3%. Antiviral evaluations (protective, curative, and inactivating activities) of the extract at 100 μg/mL were assayed against Tobacco mosaic virus (TMV) MG264131 using the half-leaf method to determine the inhibitory percentage towards the number of local lesions. The protective treatment of Nicotiana glutinosa leaves exhibited excellent activity (72.22%) with a 91.1-fold reduction in TMV-CP accumulation in infected tissues. Furthermore, Real-time quantitative PCR revealed that the expression level of PAL and PR-1 (salicylic acid marker) genes were significantly up regulated at four days-post inoculation (dpi) for all treatments compared to untreated leaves. The insecticidal effect was screened by the contact and fumigant methods against Tribolium castaneum (Herbst) and Sitophilus oryzae L. in vitro. In contact assay, all concentrations 1, 5, 10, 20 and 30 ppm caused 100% toxicity to the two tested pests within 24 h, whereas the fumigant assay, gave the highest mortality against T. castaneum and S. oryzae by 20 ppm (61.66%) and 30 ppm (57.77%), respectively after 24 h. The HPLC analysis of ECBE revealed that benzoic acid, quinol, salicylic acid, myricetin, and rutin were the most abundant polyphenolic compounds found in the extract. In conclusion, when the extract concentration increases, the growth of fungal mycelia was decreased compared with the control, especially against F. culmorum. According to the hypotheses of the results, the ECBE recommended to prevent the wood from discoloration, fungal molds by acting as bio-preservative, also trigger the resistance of plants against viral infection and high toxicity against stored-product insects.

Effect of different tissue biochar amendments on As and Pb stabilization and phytoavailability in a contaminated mine technosol

Phytomanagement of metal(loid) contaminated soils is an important study of research nowadays. However, such process often requires the application of amendments, i.e. biochar, to improve soil condition and thus permit plant establishment and growth. However, biochar properties and effects on the soil and plants depend on several parameters, for example: feedstock type, particle size, pyrolysis conditions, and application rate. The aim of this study was to assess which tissue from the oak trunk (bark, sapwood, heartwood) was responsible for the positive effects observed in previous studies on biochars derived from wood. A mesocosm experiment was thus set up using a former mine soil, amended or not, using 2% biochars produced from three oak tissues (bark, sapwood, heartwood) and with three particle sizes (0.2-0.4 mm, 0.5-1 mm, 1-2.5 mm). Phaseolus vulgaris plants were used as indicators of toxicity, and were grown for 14 days. Results of soil pore water (SPW) physico-chemical parameters, and plant growth and metal(loid) (As and Pb) accumulation showed a highly significant feedstock effect but no particle size effect. Among the three feedstocks, bark biochars induced greater improvements in the different SPW parameters whereas it was the only tissue increasing plant growth. Therefore, bark seems to be the best trunk part to produce a biochar that will immobilize mainly Pb compared to As.

Effect of thinning and burning fuel reduction treatments on forest carbon and bushfire fuel hazard in Eucalyptus sieberi forests of South-Eastern Australia

More frequent hot and windy weather in fire prone forested landscapes requires that a full suite of fuel reduction measures be investigated for effectiveness in fuel hazard reduction, environmental impact and carbon (C) outcomes. Although prescribed fire and thinning are routinely applied in forests of North America to reduce fuel loads, there are few detailed studies from Australia. We report the impacts of fuel reduction treatments including burning, mechanical thinning and the combination of both on forest C and fuel hazard in open forests dominated by Eucalyptus sieberi in south-eastern Australia. Carbon losses to the atmosphere and redistribution within the forest were calculated from stocks within each fuel category before and after treatment. Mechanical thinning + burning was the most effective treatment for reducing aboveground C and fuel hazard, with major reductions in dead trees, stumps and understorey, as well as stems removed for sale as pulpwood. However forest floor fuel loads increased in thinned treatments relative to control forests. The overall fuel hazard rating in the burn only treatment was significantly reduced from extreme to low immediately following burning. In thinned only stands, the overall fuel hazard rating did not change from the pre-treatment rating of extreme, due to high surface and forest floor fuel loads and loose and flammable bark on the retained overstorey trees. This result suggests the current fuel hazard guide in use in Australia should be revised to enable it to better describe the benefits of thinning for fuel reduction - in this case the removal of about 50% of aboveground C mostly as overstorey trees, and a significant reduction in understorey, dead trees and stumps.

Assessment of the possibility of using deciduous tree bark as a biomonitor of heavy metal pollution of atmospheric aerosol

The aim of the research was to assess the possibility to use deciduous tree bark in the biomonitoring of urban areas. The tree bark taken from various deciduous tree species growing in the Opole Province (south-western Poland) was used for the research. The bark was collected from tree trunks in the period of June 2-26, 2017. Concentrations of the heavy metals were determined in the barks by flame atomic absorption spectrometry (FAAS). On the basis of the research, it was determined that type of tree, distance from pollution source, elevation off the ground and the side of trunk from which bark was sampled all influence the research results. A comparison of the values of coefficient of variation CV demonstrated that the bark Quercus robur and Betula pendula is more heterogeneous, e.g. for Fe CV_{Quercus robur} is 48.0 % and CV_{Betula pendula} = 42.3 %, compared to Fagus sylvatica (CV_Fe = 22.6%). In order to limit the influence of environmental factors (e.g. air movement caused by vehicles and pedestrians) on the samples pollution level with analytes, it seems that the optimum level for collecting the samples is 1.5-2.0 m. It was demonstrated that deciduous tree bark can be used as bioindicator in assessing the pollution of atmospheric aerosol by heavy metals, due to its occurrence in urban areas. However, it is important to validate all stages of the analysis procedure that uses deciduous tree bark.

Cascade processing of softwood bark with hot water extraction, pyrolysis and anaerobic digestion

A process model based on hot water extraction (HWE), slow pyrolysis and anaerobic digestion (AD) were used for pine and spruce bark utilisation. First tannins (32 mg/g and 11.8 mg/g, respectively) and polyphenols were recovered via HWE. Then, the residue was pyrolysed to produce biochar (marketable quality), gas (energy source) and liquid fractions. The liquid fraction was further separated into aqueous acidic fraction and to tar fraction. Bark, extracted bark residue and acidic liquid fraction from pyrolysis were treated in AD to produce biomethane and digestate. The methane yields from pine and spruce bark and extracted bark residue were low (from 42 to 96 mLCH4/gVSadded) and showed only small differences. In conclusion, cascade processing can improve the performance of subsequent single processes and utilise biomass sources with higher efficiency. The best processing chain may vary in different cases and the overall energy balance of processing needs further research.

Chemical profiles of birch and alder bark by ambient mass spectrometry

Desorption atmospheric pressure photoionization (DAPPI) is an ambient mass spectrometry (MS) technique that allows the analysis of both polar and nonpolar compounds directly from the surfaces of various sample types. Here, DAPPI was used to study the chemical profiles in different parts of birch and alder tree barks. Four distinct fractions of Betula pendula (silver birch) bark were collected from three different developmental stages of the stem, after which the chemical profiles of the different tissue types were measured. Of special interest were triterpenoids, a class of important defensive substances, which are found in the bark of the silver birch. Additionally, the chemical profiles of lenticels and the surrounding surfaces in the phellem of B. pendula (silver birch), Alnus glutinosa (black alder), and Alnus incana (gray alder) were screened with DAPPI. Another ambient MS technique, laser ablation atmospheric pressure photoionization (LAAPPI), was further used for the mass spectrometry imaging of lenticels on the B. pendula phellem. All the studied birch bark fractions showed individual chemical profiles in DAPPI. The mass spectra from the young apical stem and the transition zone resembled each other more than the mature stem. Instead, the phellem was found to contain a high amount of triterpenoids in all the developmental stages of the stem. The most intense peaks in the DAPPI mass spectra of the birch bark fractions were those of betulin and lupeol. Betulinic and betulonic acid peaks were intense as well, and these compounds were detected especially in the lenticels of the tree samples.

Decreasing litterfall mercury deposition in central European coniferous forests and effects of bark beetle infestation

We evaluated a 14-year trend (2003-2017) in mercury (Hg) concentrations and fluxes in six litterfall categories (needles, bark, twigs, cones, lichen, and a mixture of unidentified fragments) at six research plots situated in two central European unmanaged mountain forest stands, dominated by mature Norway spruce. One of the stands (catchment of Plešné Lake, PL) was infested by bark beetle and all mature spruces died at three of four research plots during the study. One PL plot and two plots in the second stand (catchment of Čertovo Lake, CT) were intact and used as a control. At the intact plots, the litterfall Hg deposition averaged 45 and 32 μg/m²/year in the PL and CT catchments, respectively, while bulk precipitation Hg deposition was an order of magnitude lower (2.6 μg/m²/year). In the individual litter categories, Hg concentrations averaged 223, 195, 126, 81, 79 and 30 μg/kg in lichen, unidentified fragments, bark, twigs, needles and cones, respectively. As a result of decreasing European Hg emissions, Hg concentrations in most litter categories decreased from 2003 to 2017. Consequently, the litter-associated Hg flux to the forest floor decreased from 66 to 23 μg/m²/year during 2003-2017. The litterfall mass fluxes exhibited no trends at the intact plots. In contrast, the litter-associated Hg flux increased 5-fold after tree dieback due to elevated litterfall, averaging 218 μg/m²/year Hg at the PL infested plots during 2004-2009. The relative contribution of individual litter categories to the total Hg flux shifted from needle to bark and twig dominance. Starting in 2010, Hg flux decreased to pre-disturbance levels for the following decade. The tree mortality in the PL catchment provided a unique opportunity to evaluate changes in litter-associated Hg fluxes to the forest floor during and after natural tree dieback.

Application of natural mixed bacteria immobilized carriers to different kinds of organic wastewater treatment and microbial community comparison

Although many literatures have reported that biomass materials had been used for water treatment, most of the biomass materials were directly used for adsorbing toxic or organic substances. In this research, modified pine bark and corn straw were used to prepare the high-efficiency and low-cost activated sludge immobilized materials. By treating phenol wastewater and ordinary organic wastewater, various factors influencing the treatment effect were investigated. The results showed that the immobilized biological carriers had good effects on the treatment of two kinds of wastewater. The removal efficiency of the phenol wastewater reached 100% in 24 h, and the removal efficiency of ordinary organic wastewater reached 95.5% in 96 h. The results of microbial community analysis showed that the abundance of the immobilized carrier and that of the original sludge was similar. But when treating different wastewater, the number and proportion of microorganisms were significantly different.

Comparison of Chemical Composition and Antioxidant Capacity of Fruit, Flower and Bark of Viburnum opulus

In this work, the profiles of phenolics, fiber, pectins, sugars, organic acids and carotenoids, vitamin C, ash, protein and fat contents, as well as antioxidant capacity were compared in fruits, flowers, and bark of Viburnum opulus (VO). Antioxidant capacity was evaluated against ABTS, hydroxyl, peroxyl and superoxide free radicals, and as a reducing power by using in vitro test. The results showed great quantitative differences in the composition of the VO morphological parts tested. Fruits contained the highest concentrations of fat, organic acids, sugars, soluble dietary fiber (10.57 ± 0.54; 7.34 ± 0.06; 32.27 ± 1.25; 6.82 ± 0.38 g/100 g DW, respectively) and carotenoids (2.70 ± 0.07 mg/100 g DW). Whereas, the bark exceeded the remaining parts of the VO in terms of antioxidant capacity, ash (9.32 ± 0.17 g/100 g DW), total (59.34 ± 0.75 g/100 g DW) and insoluble dietary fiber (58.20 ± 0.73 g/100 g DW) contents as well as phenolic compounds (3.98 ± 0.04 g/100 g DW). Among the phenolic compounds quantified in this study, chlorogenic acid and (+)-catechin had the highest concentrations (> 1 g/100 g DW) in the flowers and bark, respectively.

Bioaccumulation of heavy metals air pollutants by urban trees

Leaf and bark of trees are tools for assessing the effects of the heavy metals pollution and monitoring the environmental air quality. In this study, the possibility of using leaves and bark of two urban trees, namely, Ficus nitida and Eucalyptus globulus as a bioindicator of atmospheric pollution was evaluated by determining the composition of heavy elements in the tree leaves, bark, soil, and the atmospheric dust. Two common tree species, namely, F. nitida and E. globulus were selected in the heavily industrial zone of surrounding Minya governorate, Upper Egypt. Two urban areas with heavy traffic load (sites 1 and 2), three industrial zones (sites 3, 4, and 5) and an uncontaminated area as a control were selected (site 6). Sampling from leaf, bark, soil, deposited dust of trees was carried out in winter and summer seasons (from November 2016 to March 2017). The concentrations of heavy metals in dust, soil, leaves, and bark possess the same trend: Pb>Cu>Cd. The highest concentration of cadmium, lead, and copper was found in the leaf of F. nitida and E. globulus higher than bark samples of the studied species, supporting the idea suggesting that tree leaves can be used as a good indicator of heavy metals accumulation. A high and statistically significant correlation (p < .05) was found between Pb concentrations in the atmospheric dust and those in the leaves of both species throughout the two growing seasons, confirming that the main source of incorporated Pb is the atmospheric dust. Otherwise, the obtained results showed that F. nitida tree does not seem to be a good accumulator of Cu. According to the obtained results, F. nitida and E. globulus trees are more likely to capture cadmium and lead from air, so planting these trees in industrial areas with such atmospheric pollutants would be beneficial.

bark, leaves and seeds

Careya arborea Roxb. (Family: Lecythidaceae) is commonly called as Slow match tree and is an important medicinal plant. Its different parts viz. bark, leaves and seeds have been reported to show many pharmacological activities. High-performance thin-layer chromatography (HPTLC) is a simple, fast and precise technique for the detection of phytochemicals present in the plant. Therefore, the objective of the present study was to characterize the phytochemical profile for various secondary metabolites using HPTLC for C. arborea bark, leaves and seeds extracts, which revealed the confirmation of these phytochemicals. The present study suggested that the bark contains all the classes of compounds tested namely alkaloids, anthracene derivatives, arbutin derivatives, bitter compounds, cardiac glycosides, coumarin derivatives, essential oils, flavonoids, lignans, pungent-tasting principles, saponins, triterpenes and valepotriates. Whereas, alkaloids are not detected in leaves, and alkaloids and arbutin derivatives are not detected in seeds.

Fire intensity effects on post-fire fuel recovery in Eucalyptus open forests of south-eastern Australia

This is a study of the re-accumulation of bushfire fuels following both prescribed fire of low fireline intensity (<700 kW m^-1) and wildfire of high intensity (>10,000 kW m^-1) in Australian Eucalyptus open forests of differing annual rainfall. Repeated measurements over 5 to 7 years of litter, elevated fuels, coarse woody debris, and bark revealed more rapid fuel recovery in higher rainfall forests compared with lower rainfall forests, following prescribed fire. In prescribed-burnt forests with mean annual rainfall 900-950 mm all fuel categories recovered to very high within seven years, with elevated fuels exceeding pre-fire loads by up to 200%. No fuels in prescribed-burnt forests with mean annual rainfall 600-650 mm recovered to pre-fire loads after six years suggesting that rainfall is an important driver of the rate of fuels recovery. High intensity wildfire in lower rainfall forests (600-650 mm) stimulated the rapid recovery of elevated fuels to over 600% of pre-fire loads - effectively transforming open forest formations into shrublands over the 6 years after fire. The recovery of elevated fuels following both prescribed fire in high rainfall forests and wildfire in low rainfall forests did not follow a gradual negative exponential increase often approximated by an Olson curve, but peaked early after fires. This suggests that the Olson recovery function, the default for predicting loads for these fuels in the operational fire behaviour models in use in south-eastern Australia, may not be appropriate in all cases. Fire simulations were run for forests burnt in wildfires using default (forest) and observed (shrubland) vegetation types. Under weather conditions similar to the previous wildfire, predictions for fireline intensities and the rate of spread would be at least 50% greater in transitional shrubland than forest, emphasizing the importance of accounting for vegetation dynamics for safe response management.

Enhanced radiocesium uptake by rice with fermented bark and ammonium salt amendments

There are ongoing problems with radioactive cesium (Cs) contaminated agricultural soil after the Fukushima Daiichi Nuclear Power Plant accident. In this study, the behavior of Cs uptake by rice plants grown in soil sprayed with fermented bark amendment (FBA) was investigated. In rice cultivation by pot, the application of FBA resulted in the acceleration of Cs uptake by rice plants. This might be related to the reduction of oxidation reduction potential in the soil caused by spraying FBA. Also, when 0.1 wt% ammonium sulfate was used as a fertilizer in Cs-contaminated soil, the bioconcentration factor (BCF) of Cs taken up into rice straw was 1.4-times higher than that in soil sprayed with FBA. The Cs uptake effect was further enhanced by the combination of 1 wt% FBA with 0.1 wt% ammonium sulfate to soil where the BCF was enhanced to 1.8-times higher than that in soil sprayed with FBA alone. The enhanced uptake into rice was likely because of accelerated uptake of leachable forms of Cs based on the cation-exchange to NH₄⁺ in soil; this was confirmed by the Cs fractionation by sequential extraction procedures. The phytoremediation capability of rice is considered to be lower than that of commonly used phytoremediation plants, but supplementation with FBA and ammonium salt could enhance Cs accumulation even for low-efficiency phytoremediation plants.

Surveying the efficiency of Platanus orientalis bark as biosorbent for Ni and Cr(VI) removal from plating wastewater as a real sample

Heavy metals make up one of the most important pollutants in industrial wastewater. For wastewater, adsorbent materials developed from suitable biomass can be effective in removing the heavy metal ions. In this study, the powder of the bark of Platanus orientalis was used as a biosorbent to remove Cr(VI) and Ni from a nickel-chromium plating wastewater as a real sample for the first time. Two different adsorbents were used in analyzing the data: modified and non-modified bark. The extent of adsorption was dependent on the pH (in the range of 1.5, 3, 5, 7, and 9), the time of contact (in the range of 30, 60, 90, 120 min), and the adsorbent dosage (different doses of 0.5, 1, 1.5, 2 g L^-1). The concentration of unabsorbed metals was measured by inductively coupled plasma-optical emission spectroscopy (ICP-OES, Model Thermo iCAP 6000). The maximum removal of Cr(VI) was obtained 89.6% for non-modified bark and 90.7% for modified bark both at pH of 5 in 2 g L^-1 of adsorbent dosage in 300 min. While, the maximum Ni removal was obtained 74.5 and 56.5% for non-modified and modified bark, respectively, at pH 3 in 2 g L^-1 adsorbent dosage in 90 min. Based on the results, Freundlich isotherm appears better fitted in adsorption with a better correlation coefficient (R² = 0.998) than that of Langmuir model with a correlation coefficient of R² = 0.996. The q_max for Ni₁ and Ni₂ were 126.58 and 285.714 mg g^-1 and the q_max for Cr₁ and Cr₂ were 13.423 and 19.920 mg g^-1, respectively. The FTIR studies indicated that S-O stretching group from sulfonate, surface O=H stretching, and also aliphatic C-H stretching are responsible for the adsorption. The SEM results obviously show the difference between the biomass surface before and after loading of ions. Ultimately, the present study concluded that P. orientalis could be a cheap and efficient biosorbent to adsorb and remove Cr(VI) and Ni from the plating wastewater; however, it seems more efficient for Cr(VI) with an average removal power of 90.15% than Ni with an average removal power of 65.75%.

Simultaneous suppression of magnetic nanoscale powder and fermented bark amendment for arsenic and cadmium uptake by radish sprouts grown in agar medium

In this study, we effectively suppressed arsenic and cadmium uptake into a plant using magnetic nanoparticle powder (MNP) and fermented bark amendment (FBA) in agar medium. The MNP (which consists of FeO·Fe₂O₃) quantitatively adsorbed arsenite (As(III)) and the FBA (which mainly consists of bark waste) adsorbed cadmium, regardless of the pH. The properties of MNP and FBA in agar medium were compared based on the amounts of arsenic and cadmium in cultivated radish sprouts. While adding FBA selectively suppressed cadmium uptake by radishes, adding MNP suppressed the uptake of both arsenic and cadmium. Considering that the uptake of analytes was slightly reduced even in agar without any additives, the agar itself might also have contributed to the suppression of analyte uptake into plants. In addition, even when radish sprouts were cultivated in agar containing arsenic and cadmium (100 μg/L each) mixed with 25 g MNP and 1.25 g FBA per 25 mL agar, arsenic and cadmium absorption decreased by 90% and 82%, respectively, versus agar without additives. Furthermore, adding the mixed amendment to agar accelerated the growth of radishes, whereas MNP significantly inhibited radish growth even though it reduced analyte uptake. Our results indicated that mixing inorganic and organic adsorbents could simultaneously inhibit cadmium and arsenic uptake by plants and accelerate plant growth in the cadmium and arsenic-contaminated agar medium.

Optimal Preparation of Tissue Sections for Light-Microscopic Analysis of Phloem Anatomy

In order to successfully analyze and describe any plant tissue, the first challenge is preparation of good anatomical slides. The challenge is even greater when the target tissue has heterogeneous characteristics, such as the phloem where soft and stiff tissues occur side by side. The goal of this chapter is to present a detailed protocol containing various techniques for optimal preparation of phloem tissue samples for light microscopic analysis. The process typically involves the steps of fixation, softening, embedding, sectioning, staining, and mounting. The protocol can be applied to make samples of phloem and surrounding tissues of stems and roots, from woody to herbaceous plants.

Potential of trees leaf/ bark to control atmospheric metals in a gas and petrochemical zone

Leaf and bark of trees are tools for assessing the effects of the heavy metals pollution and monitoring the environmental air quality. The aim of this study was to evaluate the presence of Ni, Pb, V, and Co metals in four tree/shrub species (Conocarpus erectus, Nerium oleander, Bougainvillea spectabilis willd, and Hibiscus rosa-sinensis) in the heavily industrial zone of Asaloyeh, Iran. Two industrial zones (sites 1 and 2), two urban areas (sites 3 and 4), and two rural areas (sites 5 and 6) in the Asaloyeh industrial zone and an uncontaminated area as a control were selected. Sampling from leaf and bark of trees was carried out in spring 2016. The metals content in the washed and unwashed leaf and bark was investigated. The results showed that four studied metals in N. oleander, C. erectus, and B. spectabilis willd in all case sites were significantly higher than that of in the control site (p < 0.05). The highest concentration of metals was found in sites 3, 4, and 6; this was due to dispersion of the pollutants from industrial environments by dominant winds. The highest comprehensive bio-concentration index (CBCI) was found in leaf (0.37) and bark (0.12) of N. oleander. The maximum metal accumulation index (MAI) in the samples was found in leaf of N. oleander (1.58) and in bark of H. rosa-sinensis (1.95). The maximum bio-concentration factor (BCF) was seen for cobalt metal in the N. oleander leaf (0.89). The nickel concentration in washed-leaf samples of C. erectus was measured to be 49.64% of unwashed one. In general, the N. oleander and C. erectus species were found to have the highest absorption rate from the atmosphere and soil than other studied species, and are very suitable tools for managing air pollution in highly industrialized areas.

Variability in the composition of phenolic compounds in winter-dormant Salix pyrolifolia in relation to plant part and age

The phenolic phytochemicals of winter-dormant Salix pyrolifolia were determined from the vegetative buds, and the bark and wood of different-aged twigs by HPLC-DAD and UHPLC-QTOF-MS analyses. All the plant parts were composed of salicylate glucosides and the other Salix-specific, simple phenolic glucosides as well as of phenolic acids, flavonoids and the high molecular-weight condensed tannins. The flavonoid composition was most diverse in buds and they also contained a large amount of chlorogenic acid (5-caffeoylquinic acid IUPAC), while salicylate glucosides and simple phenolic glucosides predominated in bark. The wooden interior part of the twigs contained fewer components and the lowest concentrations of compounds. Salicortin was the main compound in winter-dormant S. pyrolifolia (over 10% of bark biomass), but the concentrations of picein, salireposide, isosalipurposide, catechin and condensed tannins were also high. The flavonoid composition was highly naringenin- and quercetin-biassed. The composition of phytochemicals was organ-specific and remained relatively similar between different-aged trees. However, there were compound-specific fluctuations in the concentrations of phytochemicals with the age of the trees and within plant parts. Generally, the one-year-old plants differed from the older trees in their high concentration of condensed tannins in all the plant parts studied and in the highest concentration of isosalipurposide in bark, while the total amounts of salicylate glucosides in plant parts, and of naringenin glucosides in buds, tended to be highest in 20 year-old-trees.

stem bark ethanol extract and its fractions in experimental models

ETHNOPHARMACOLOGICAL RELEVANCE

The stem bark of Theobroma cacao L. have been used for the treatment of inflammation, toothache, measles and malaria in ethnomedicine. However, the anti-inflammatory activity of Theobroma cacao stem bark has not been fully elucidated.

AIM

The anti-inflammatory activity of Theobroma cacao stem bark ethanol extract and its fractions was investigated in this study.

MATERIALS AND METHODS

The anti-inflammatory effect of ethanol extract of Theobroma cacao stem bark (EETc) and its dichloromethane (DCMF), ethylacetate (EAF) and aqueous (AQF) fractions was investigated in erythrocytes membrane stabilizing assay and carrageenan-induced paw oedema. The anti-inflammatory activity of the EAF and EETc was investigated in carrageenan induced-granuloma air pouch models.

RESULTS

The extract and fractions showed significant membrane stabilizing action on rat erythrocytes cell membrane. The oral administration of DCMF, EAF and AQF (250 mg/kg) significantly inhibited paw oedema induced by carrageenan (41.3%, 55.0% and 45.0%, respectively) compared to control group. The EAF (62.5, 125 and 250 mg/kg) and EETc (250 mg/kg) significantly inhibited exudates formation in carrageenan air pouch by (63.8, 71.5, 74.5, 64.3%) at 24 h and by (69.4%, 75.7%, 77.1% and 68.4%) at 72 h respectively. The EETc and EAF significantly reduced neutrophil counts, protein, nitrite, Tumor necrosis factor (TNF-α) and malondialdehyde (MDA) but increased reduced glutathione (GSH) levels compared to control in pouch exudates. The HPLC fingerprint of EAF revealed presence of caffeic acid, rutin, ferulic acid and morin.

CONCLUSION

Ethanol extract of Theobroma cacao and its ethylacetate fraction demonstrated anti-inflammatory activity partly by reducing neutrophil migration and inflammatory mediator production.

Monitoring atmospheric nitrogen pollution in Guiyang (SW China) by contrasting use of Cinnamomum Camphora leaves, branch bark and bark as biomonitors

Moss (as a reference material) and camphor (Cinnamomum Camphora) leaf, branch bark and bark samples were systematically collected across an urban-rural gradient in Guiyang (SW China) to determine the efficacy of using these bio-indicators to evaluate nitrogen (N) pollution. The tissue N concentrations (0.13%-2.70%) and δ¹⁵N values (-7.5‰ to +9.3‰) of all of these bio-indicators exhibited large spatial variations, as they recorded higher values in urban areas that quickly decreased with distance from the city center; moreover, both soil N concentrations and soil δ¹⁵N values were found no significant differences within each 6 km from the urban to the rural area. This not only suggests that the different N uptake strategies and variety of N responses of these bio-indicators can be reflected by their different susceptibilities to variations in N deposition but also reveals that they are able to indicate that urban N deposition is mostly from traffic and industry (NO_x-N), whereas rural N deposition is mainly from agriculture (NH_x-N). Compared to previously collected urban moss and camphor leaf samples, the significantly increased δ¹⁵N values in current urban moss and camphor leaf samples further indicate a greater contribution of NO_x-N than NH_x-N to urban N deposition. The feasibility of using the N concentrations and δ¹⁵N values of branch bark and bark as biomarkers of N deposition thus was further confirmed through the comparative use of these bio-indicators. It can be concluded that vascular plant leaves, branch bark and bark can be used as useful biomonitoring tools for evaluating atmospheric N pollution. For further study, quantitative criteria for the practical use of these bio-indicators in response to N deposition should be developed and the differences in the δ¹⁵N values of different plant parts should also be considered, particularly in urban environments that are severely disrupted by atmospheric pollution.

Dataset on analysis of dyeing property of natural dye from Thespesia populnea bark on different fabrics

The natural dyes separated from plants are of gaining interest as substitutes for synthetic dyes in food and cosmetics. Thespesia populnea (T. populnea) is widely grown plant and used in the treatment of various diseases. This study was aimed to separate natural dye from T. populnea bark and analysis of its dyeing property on different fabrics. In this investigation pharmacognostic study was carried out. The pharmacognostic study includes morphological study, microscopical examination, proximate analysis along with the phytochemical study. The dyeing of different fabric was done with a natural dye extracted from T. populnea bark. The fabrics like cotton, butter crep, polymer, chiken, lone, ulene and tarakasa were dye with plant extract. The various evaluation parameters were studied. It includes effect of washing with water, effect of soap, effect of sunlight, effect of alum, effect of Cupric sulphate, microscopical study of fabrics and visual analysis of dyeing by common people were studied. In results, natural dye isolated from T. populnea bark could be used for dyeing fabrics with good fastness properties. The studies reveals that, the dyeing property of fabrics after washing with water and soap, exposed to sunlight does not get affected. It was observed that cotton and tarakasa stains better as compared with other fabrics. It was concluded that the ethanolic extract having good dyeing property.

Photocatalytic degradation of synthetic food dye, sunset yellow FCF (FD&C yellow no. 6) by Ailanthus excelsa Roxb. possessing antioxidant and cytotoxic activity

The purpose of our work is to identify the bioactive compounds of bark and leaves extract from Ailanthus excelsa Roxb. and to explore its effectiveness against synthetic food dye. The presence of primary and secondary metabolites was confirmed by carrying out phytochemicals analysis. With the prior knowledge accessible on the indispensable secondary metabolites holding antioxidant and cytotoxicity activity, the quantitative screening of total phenolic and flavonoid content in methanolic and aqueous extract of bark and leaves from Ailanthus excelsa were done. Comparatively, a higher value of flavonoid (161±0.3μg/mg) and phenolic acid content (152.4±0.14μg/mg) was found in bark extract. By FTIR analysis, the characteristic peak was obtained at 1581.63 and 1598.99cm^-1 confirmed the presence of functional groups associated to flavonoids and other phenolic groups respectively. In bark extract, 81% of DPPH inhibition was observed when compared to ascorbic acid (standard) 92% of free radical scavenging activity. Bark extract from Ailanthus excelsa exhibited 71% cytotoxicity against HeLa cell line (cervical cancer). In examining the toxicity level of crude extracts with red blood cells (RBC), the bark extract was showed a very less (2.8%) haemolytic activity. They also showed maximum zone of inhibition in antibacterial activity i.e. 13±0.5mm against Escherichia coli culture. At a concentration of 10mg/mL of crude extract from A. excelsa, 55% degradation of sunset yellow dye was observed. It concludes that, the compounds present in the A. excelsa, especially the bark extract showed better photocatalytic, haemolytic, antioxidant, cytotoxicity and antibacterial activity when compared to leaves extract.

Triterpenoid saponins and other glycosides from the stems and bark of Jaffrea xerocarpa and their biological activity

Six previously undescribed triterpenoid saponins and two previously undescribed norlupane triterpenes were isolated with five known saponins, three known lupane derivatives, 17,20-didehydro-20-deoxyjujubogenin, rutin, (±) 3α-O-β-d-glucopyranosyl-lyoniresinol, (±) 4-O-β-d-glucopyranosyl-maesopsin, three phenol glycosides, and uridine from the stems and bark of Jaffrea xerocarpa (Baill.) H. C. Hopkins & Pillon (= Basionym Alphitonia xerocarpus Baill.) (Rhamnaceae), an endemic tree of New Caledonia. The chemical structures of the purified compounds were identified by nuclear magnetic resonance and mass spectrometry. The isolated compounds were tested for their antioxidant, antityrosinase, antibacterial and cytotoxic activities. The aqueous methanol extract showed antioxidant activity (DPPH assay) due to the presence of rutin and other phenolic compounds. Three lupane triterpenes showed good cytotoxic activities against KB cells line (IC₅₀ from 7.7 to 8.5 μM). The previously undescribed 2α-formyl-A(1)norlup-20(29)-en-28-oic acid showed antibacterial activity against Staphylococcus aureus and Enterococcus faecalis with both MIC values of 4 μg/mL.

Removal of Water-Soluble Extractives Improves the Enzymatic Digestibility of Steam-Pretreated Softwood Barks

Softwood bark contains a large amounts of extractives—i.e., soluble lipophilic (such as resin acids) and hydrophilic components (phenolic compounds, stilbenes). The effects of the partial removal of water-soluble extractives before acid-catalyzed steam pretreatment on enzymatic digestibility were assessed for two softwood barks—Norway spruce and Scots pine. A simple hot water extraction step removed more than half of the water-soluble extractives from the barks, which improved the enzymatic digestibility of both steam-pretreated materials. This effect was more pronounced for the spruce than the pine bark, as evidenced by the 30 and 11% glucose yield improvement, respectively, in the enzymatic digestibility. Furthermore, analysis of the chemical composition showed that the acid-insoluble lignin content of the pretreated materials decreased when water-soluble extractives were removed prior to steam pretreatment. This can be explained by a decreased formation of water-insoluble “pseudo-lignin” from water-soluble bark phenolics during the acid-catalyzed pretreatment, which otherwise results in distorted lignin analysis and may also contribute to the impaired enzymatic digestibility of the barks. Thus, this study advocates the removal of extractives as the first step in the processing of bark or bark-rich materials in a sugar platform biorefinery.

Determinants of seasonal changes in availability of food patches for elephants (Loxodonta africana) in a semi-arid African savanna

Loss of biodiversity caused by impact of elephants (Loxodonta africana) on African woodlands may require a management response, but any action should be based on an understanding of why elephants choose to utilise trees destructively. Comprehension of elephant feeding behaviour requires consideration of the relative value of the plant groups they may potentially consume. Profitability of available food is partly determined by the time to locate a food patch and, therefore, as a foundation for understanding the influence of food availability on diet selection, key controls on the density of grass, forb, and browse patches were investigated across space and time in a semi-arid African savanna. Density of food patches changed seasonally because plant life-forms required different volumes of soil water to produce green forage; and woody plants and forbs responded to long-term changes in soil moisture, while grasses responded to short-term moisture pulses. Soil texture, structure of woody vegetation and fire added further complexity by altering the soil water thresholds required for production of green forage. Interpolating between regularly-timed, ground-based measurements of food density by using modelled soil water as the predictor in regression equations may be a feasible method of quantifying food available to elephants in complex savanna environments.

The history of mercury pollution near the Spolana chlor-alkali plant (Neratovice, Czech Republic) as recorded by Scots pine tree rings and other bioindicators

We assessed >100years of mercury (Hg) pollution recorded in the tree rings of Scots Pine near a Czech chlor-alkali plant operating since 1941. Hg concentrations in tree rings increased with the launching of plant operations and decreased when Hg emissions decreased in 1975 due to an upgrade in production technology. Similar to traditional bioindicators of pollution such as pine needles, bark and forest floor humus, Hg concentrations in Scots Pine boles decreased with distance from the plant. Mean Hg in pine bole in the 1940s ranged from 32.5μg/kg Hg at a distance of 0.5km from the plant to 5.4μg/kg at a distance of >4.7km, where tree ring Hg was the same as at a reference site, and other bioindicators also suggest that the effect of the plant was no longer discernible. Tree ring Hg concentrations decreased by 8-29μg/kg since the 1940s at all study sites including the reference site. The lack of exact correspondence between changes at the plant and tree ring Hg indicated some smearing of the signal due to lateral translocation of Hg from sapwood to heartwood. Bole Hg concentrations reflected local and regional atmospheric Hg concentrations, and not Hg wet deposition.

Chemical element accumulation in tree bark grown in volcanic soils of Cape Verde-a first biomonitoring of Fogo Island

Barks from Prosopis juliflora (acacia) were collected in 12 sites of different geological contexts over the volcanic Fogo Island (Cape Verde). Elemental contents of Ba, Br, Co, Cr, Fe, K, Na, Zn and some rare earth elements (REE)-La, Ce, Sm, Eu, Tb, Yb, and Lu, were obtained for biological samples and topsoils by using k ₀-standardized and comparative method of instrumental neutron activation analysis (INAA), aiming the evaluation of chemical elements uptake by acacia bark. This first biomonitoring study of Fogo Island showed that, in general, significant accumulations of trace elements present in high amounts in these soils occur. This can be partially explained by the semi-arid climate with a consequent bioavailability of chemical elements when rain drops fall in this non-polluted environment. REE enrichment factors (EFs) increase with the decrease of ionic radius. Heavy REE (HREE) are significantly enriched in bark, which agrees with their release after the primary minerals breakdown and the formation of more soluble compounds than the other REE, and uptake by plants. Among the potential harmful chemical elements, Cr appears to be partially retained in nanoparticles of iron oxides. The high EFs found in tree barks of Fogo Island are certainly of geogenic origin rather than anthropogenic input since industry and the use of fertilizers is scarce.

Current content of selected pollutants in moss, humus, soil and bark and long-term radial growth of pine trees in the Mezaparks forest in Riga

The aim of this study was to evaluate the use of various indicators in the assessment of environmental pollution and to determine the response of pine to changes of pollution levels. Mezaparks is a part of Riga that has been subject to various long-term effects of atmospheric pollution and, in particular, historically from a large superphosphate factory. To determine the spatial distribution of pollution, moss, pine bark and soil O and B horizons were used as sorbents in this study, as well as the additional annual increment of pine trees. The current spatial distribution of pollution is best shown by heavy metal accumulation in mosses and the long-term accumulation of P₂O₅ pollution by the soil O horizon. The methodological problems of using these sorbents were explored in the study. Environmental pollution and its changes could be associated with the tree growth ring annual additional increment of Mezaparks pine forest stands. The additional increment increased after the closing of the Riga superphosphate factory.

Chemical Characteristics, Antimicrobial, and Cytotoxic Activities of the Essential Oil of Egyptian Cinnamomum glanduliferum Bark

The essential oil isolated from the bark of Cinnamomum glanduliferum (Wall) Meissn grown in Egypt was screened for its composition as well as its biological activity for the first time. The chemical composition was analyzed by GC and GC/MS. The antimicrobial activity of the oil was assessed using agar-well diffusion method toward representatives for each of Gram-positive bacteria, Gram-negative bacteria, and fungi. The cytotoxic activity was checked using three human cancer cell lines. Twenty seven compounds were identified, representing 99.07% of the total detected components. The major constituents were eucalyptol (65.87%), terpinen-4-ol (7.57%), α-terpineol (7.39%). The essential oil possessed strong antimicrobial activities against Escherichia coli, with an activity index of one and minimum inhibitory concentration (MIC) equaling to 0.49 μg/ml. The essential oil possessed good antimicrobial activities against methicillin-resistant Staphylococcus aureus, Geotrichum candidum, Pseudomonas aeruginosa, Bacillus subtilis, Helicobacter pylori, Aspergillus fumigatus (MIC: 7.81, 1.95, 7.81, 0.98, 31.25, and 32.5 μg/ml, respectively). A considerable activity was reported against S. aureus and Mycobacterium tuberculosis (MIC; 32.5 and 31.25 μg/ml, respectively). The extracted oil was cytotoxic to colon (HCT-116), liver (HepG2), and breast (MCF-7) carcinoma cell lines with IC₅₀ of 9.1, 42.4, and 57.3 μg/ml, respectively. These results revealed that Egyptian Cinnamomum glanduliferum bark oil exerts antimicrobial and cytotoxic activities mainly due to eucalyptol and other major compounds.

Hydroxyl radical production by a heterogeneous Fenton reaction supported in insoluble tannin from bark of Pinus radiata

Fenton reactions driven by dihydroxybenzenes (DHBs) have been used for pollutant removal via advanced oxidation processes (AOPs), but such systems have the disadvantage of DHB release into the aqueous phase. In this work, insoluble tannins from bark can be used to drive Fenton reactions and as a heterogeneous support. This avoids the release of DHBs into the aqueous phase and can be used for AOPs. The production of ·OH was investigated using a spin-trapping electron paramagnetic resonance technique (5-dimethyl-1-pyrroline-N-oxide/·OH) in the first minute of the reaction and a high-performance liquid chromatography-fluorescence technique (coumarin/7-hydroxycoumarin) for 20 min. The ·OH yield achieved using insoluble tannins from Pinus radiata bark was higher than that achieved using catechin to drive the Fenton reaction. The Fenton-like system driven by insoluble tannins achieved 92.6 ± 0.3 % degradation of atrazine in 30 min. The degradation kinetics of atrazine was linearly correlated with ·OH production. The increased reactivity in ·OH production and insolubility of the ligand are promising for the development of a new technique for degradation of pollutants in wastewater using heterogeneous Fenton systems.

Overexpression of PaNAC03, a stress induced NAC gene family transcription factor in Norway spruce leads to reduced flavonol biosynthesis and aberrant embryo development

BACKGROUND

The NAC family of transcription factors is one of the largest gene families of transcription factors in plants and the conifer NAC gene family is at least as large, or possibly larger, as in Arabidopsis. These transcription factors control both developmental and stress induced processes in plants. Yet, conifer NACs controlling stress induced processes has received relatively little attention. This study investigates NAC family transcription factors involved in the responses to the pathogen Heterobasidion annosum (Fr.) Bref. sensu lato.

RESULTS

The phylogeny and domain structure in the NAC proteins can be used to organize functional specificities, several well characterized stress-related NAC proteins are found in III-3 in Arabidopsis (Jensen et al. Biochem J 426:183-196, 2010). The Norway spruce genome contain seven genes with similarity to subgroup III-3 NACs. Based on the expression pattern PaNAC03 was selected for detailed analyses. Norway spruce lines overexpressing PaNAC03 exhibited aberrant embryo development in response to maturation initiation and 482 misregulated genes were identified in proliferating cultures. Three key genes in the flavonoid biosynthesis pathway: a CHS, a F3'H and PaLAR3 were consistently down regulated in the overexpression lines. In accordance, the overexpression lines showed reduced levels of specific flavonoids, suggesting that PaNAC03 act as a repressor of this pathway, possibly by directly interacting with the promoter of the repressed genes. However, transactivation studies of PaNAC03 and PaLAR3 in Nicotiana benthamiana showed that PaNAC03 activated PaLAR3A, suggesting that PaNAC03 does not act as an independent negative regulator of flavan-3-ol production through direct interaction with the target flavonoid biosynthetic genes.

CONCLUSIONS

PaNAC03 and its orthologs form a sister group to well characterized stress-related angiosperm NAC genes and at least PaNAC03 is responsive to biotic stress and appear to act in the control of defence associated secondary metabolite production.

Fine-grained recognition of plants from images

BACKGROUND

Fine-grained recognition of plants from images is a challenging computer vision task, due to the diverse appearance and complex structure of plants, high intra-class variability and small inter-class differences. We review the state-of-the-art and discuss plant recognition tasks, from identification of plants from specific plant organs to general plant recognition "in the wild".

RESULTS

We propose texture analysis and deep learning methods for different plant recognition tasks. The methods are evaluated and compared them to the state-of-the-art. Texture analysis is only applied to images with unambiguous segmentation (bark and leaf recognition), whereas CNNs are only applied when sufficiently large datasets are available. The results provide an insight in the complexity of different plant recognition tasks. The proposed methods outperform the state-of-the-art in leaf and bark classification and achieve very competitive results in plant recognition "in the wild".

CONCLUSIONS

The results suggest that recognition of segmented leaves is practically a solved problem, when high volumes of training data are available. The generality and higher capacity of state-of-the-art CNNs makes them suitable for plant recognition "in the wild" where the views on plant organs or plants vary significantly and the difficulty is increased by occlusions and background clutter.

Levels of selected trace elements in Scots pine (Pinus sylvestris L.), silver birch (Betula pendula L.), and Norway maple (Acer platanoides L.) in an urbanized environment

The aim of the study was to determine the concentrations of selected trace elements in needles and bark of Scots pine (Pinus sylvestris L.), leaves and bark of silver birch (Betula pendula L.), and Norway maple (Acer platanoides L.), as well as in the soil in which the trees grew, depending on their localization and hence the distribution of local pollution sources. The content of trace elements in needles of Scots pine, leaves of silver birch, and Norway maple and in bark of these trees depended on the location, tree species, and analyzed organ. The content of Fe, Mn, and Zn in needles, leaves, and bark of the examined tree species was significantly higher than that of the other elements. The highest average content of Fe and Mn was detected in leaves of Norway maple whereas the highest average content of Zn was found in silver birch leaves. The impact of such locations as the center of Olsztyn or roadside along Road 51 on the content of individual elements tended to be more pronounced than the influence of the other locations. The influence of the sampling sites on the content of trace elements in tree bark was less regular than the analogous effect in needles and leaves. Moreover, the relevant dependences were slightly different for Scots pine than for the other two tree species. The concentrations of heavy metals determined in the soil samples did not exceed the threshold values set in the Regulation of the Minister for the Environment, although the soil along Road 51 and in the center of Olsztyn typically had the highest content of these elements. There were also significant correlations between the content of some trace elements in soil and their accumulation in needles, leaves, and bark of trees.