Growth of Pacific staghorn sculpin (Leptocottus armatus) is reduced at contaminated sites in the Lower Duwamish River, Washington

The Lower Duwamish River is a highly industrialized waterway flowing into the densely urbanized Puget Sound waterfront of Seattle, Washington, USA. The river has been profoundly altered from its natural state following more than a century of channelization, recurrent dredging, shoreline armoring, and pollution discharges. As part of a Natural Resource Damage Assessment addressing historical pollution at three designated Superfund sites (i.e., the assessment area), juvenile Pacific staghorn sculpin (Leptocottus armatus) were sampled throughout the lower river in order to evaluate injury from exposure to polycyclic aromatic hydrocarbons (PAHs), polychlorinated biphenyls (PCBs), dichlorodiphenyltrichloroethane (DDTs), and butyltins (BTs). Sculpin live in close association with the river sediments within and upriver of the assessment area. Fish were collected for analysis of contaminant concentrations in composited whole bodies and stomach contents, as well as individual fish health metrics including daily somatic growth rates measured from otoliths. Sediment contaminant concentrations were also measured at sites near to fishing locations. Fish growth rates varied from 0.65 to 1.05 mm/day, and were significantly lower at unremediated downriver sites compared to upriver and remediated locations. Sculpin growth rates were negatively correlated with concentrations of PCBs in fish bodies, PAHs in stomach contents, as well as PCBs, DDTs and PAHs in sediment. Mixed effects models for whole-body and stomach content contaminants showed positive correlations between growth rate and water temperature. Temperature was not a significant confounding variable for the relationship between growth rate and sediment contaminants. Overall, these results show that juvenile sculpin are harmed by contaminant exposure in the Lower Duwamish River. Furthermore, this study demonstrates the utility of using paired biological and chemical indicators of pollutant-induced injury in a resident fish to inform a complex Natural Resource Damage Assessment and associated restoration efforts.

Daily thermal variability does not modify long-term gene expression relative to stable thermal environments: A case study of a tropical fish

Global warming is leading to an increase in the frequency and intensity of extreme weather events, magnifying the breadth of temperatures faced by ectotherms across days and seasons. Despite the importance and ecological relevance of diurnal thermal variability, the vast majority of knowledge on gene expression patterns and physiology stems from animals acclimated to constant temperatures or in the early stages of exposure to a new temperature regime. If heterothermal environments modulate responses differently from constant thermal environments, our existing capacity to forecast impacts of climate warming may be compromised. To address this knowledge gap, we acclimated barramundi (Lates calcarifer) to 23 °C, 29 °C (optimal), 35 °C and to thermal cycling conditions (23-35 °C daily with a mean of 29 °C) and sampled liver and white muscle tissue before acclimation and after 2 and 17 weeks of acclimation. NanoString nCounter technologies were used to measure expression of 20 genes related to metabolism, growth and maintenance of cellular homeostasis. Acclimation to cool and warm conditions caused predictable changes in whole-animal performance (metabolism and growth) and the underlying gene expression patterns. Acclimation to a cycling temperature regime did not change the molecular regulation of metabolism or growth compared with barramundi acclimated to constant 29 °C, nor did it cause any discernible effects on whole-animal performance. However, the heat shock response was higher in the former group, suggesting that barramundi under a daily temperature cycle have an increased need for cellular chaperoning to minimise detrimental effects of temperature on proteins. We conclude that the genetic regulation of metabolism and growth may be more dependent on the mean daily temperature than on the daily temperature range.

Divergent Temporal Trends of Mercury in Arctic Char from Paired Lakes Influenced by Climate-Related Drivers

Climate-driven changes including rising air temperatures, enhanced permafrost degradation, and altered precipitation patterns can have profound effects on contaminants, such as mercury (Hg), in High Arctic lakes. Two physically similar lakes, East Lake and West Lake at the Cape Bounty Arctic Watershed Observatory on Melville Island, Nunavut, Canada are being affected by climate change differently. Both lakes have experienced permafrost degradation in their catchments; however, West Lake has also undergone multiple underwater Mass Movement Events (MMEs; beginning in fall 2008), leading to a sustained 50-fold increase in turbidity. This provided the unique opportunity to understand the potential impacts of permafrost degradation and other climate-related effects on Hg concentrations and body condition of landlocked Arctic char (Salvelinus alpinus), an important sentinel species across the Circum-Arctic. Our objectives were to assess temporal trends in char Hg concentrations and to determine potential mechanisms driving the trends. There was a significant decrease in Hg concentrations in East Lake char, averaging 6.5%/year and 3.8%/year for length-adjusted and age-adjusted means, respectively, from 2008 to 2019. Conversely, in West Lake there was a significant increase, averaging 7.9%/year and 8.0%/year for length-adjusted and age-adjusted mean Hg concentrations, respectively, for 2009 to 2017 (the last year with sufficient sample size). The best predictors of length-adjusted Hg concentrations in West Lake were carbon and nitrogen stable isotope ratios, indicating a shift in diet including possible dietary starvation brought on by the profound increase in lake turbidity. Our study provides an example of how increasing lake turbidity, a likely consequence of climate warming in Arctic lakes, may influence fish condition and Hg concentrations. Environ Toxicol Chem 2023;42:2712-2725. © 2023 His Majesty the King in Right of Canada and The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC. Reproduced with the permission of the Minister of Environment and Climate Change Canada.

Waterborne copper exposure decreases fish growth and survival by promoting gills and liver impairments in largemouth bass (Micropterus salmoides)

The study aimed to investigate the effect of Cu exposure (0, 51.3, 164, 513, 1,640, and 5,130 μg/L) on fish growth performance, histology, oxidative stress, inflammation, and apoptosis in largemouth bass (Micropterus salmoides) juveniles. 270 fish (2.69 ± 0.02 g) were randomly divided into 6 groups of tanks for 4 weeks with each group comprising three replicate tanks. The results showed that fish exposed to 1,640 and 5,130 μg/L Cu exhibited a significant reduction in fish growth and survival rate (P < 0.05). Compared to the control, the fish at and above 513 μg/L Cu demonstrated histopathological damages in the gills and liver, such as shorter primary and secondary lamellae, smaller hepatocyte nuclei, and an increase in the number of necrotic cells in the liver. Compared to the control, fish at and above 1,640 μg/L Cu had a significantly higher malondialdehyde content and lower activity levels of total superoxide dismutase, glutathione peroxidase, and catalase in the gills and liver (P < 0.05). Furthermore, high concentrations of Cu (1,640 and 5,130 μg/L) significantly increased hepatic inflammation by upregulating interleukin-1β and tumor necrosis factor α expression and hepatic apoptosis by increasing cysteinyl aspartate specific protease 3 (caspase-3) and caspase-9 expression (P < 0.05). Pearson correlation analysis showed that fish growth and survival positively correlated with histological and antioxidant defense parameters, and negatively correlated with oxidative stress parameters, hepatic inflammation, and hepatic apoptosis. Taken together, these results suggest that high levels of waterborne Cu can induce growth retardation and mortality by damaging the liver and gill health.

Valorization of chick feather wastes by Geobacillus thermodenitrificans PS41 to enhance the growth of Vigna unguiculata plant and Cyprinus carpio fish

Chicken feather meal has had a significant biofertilizer approach in recent years. The current study aims to assess feather biodegradation to promote plant and fish growth. The Geobacillus thermodenitrificans PS41 strain was more efficient in feather degradation. Feather residues were separated after degradation and evaluated under a scanning electron microscope (SEM) to detect bacterial colonization on feather degradation. It was observed that the rachi and barbules were entirely degraded. The complete degradation by PS41 suggests a relatively more efficient feather degradation strain. According to Fourier-transform infrared spectroscopy (FT-IR) studies, PS41 biodegraded feathers contain the functional groups of aromatic, amine, and nitro compounds. The present study suggested that biologically degraded feather meal improved plant growth. The feather meal combined with nitrogen-fixing bacterial strain showed the highest efficiency. The biologically degraded feather meal and Rhizobium combination induced physical and chemical changes in the soil. It is directly involved in soil amelioration, plant growth substance, and soil fertility, enhancing a healthy crop environment. The feather meal 4 and 5% was used as a feed diet of common carp (Cyprinus carpio) to increase growth performances and feed utilization parameters. In hematological and histological studies of formulated diets, significantly no toxic effects occurred in fish blood, gut, or fimbriae.

Effect of feed restriction and refeeding on body condition, digestive functionality and intestinal microbiota in rainbow trout (Oncorhynchus mykiss)

The aim of the present work was to investigate the influence of fasting and refeeding on body condition, gut physiology and microbiota in reared O. mykiss. Ninety-six fish were randomly allotted among three groups subjected to different feeding plan: C (control, fed for 5 weeks); R (restricted ration over 3 weeks followed by 2 weeks feeding); F (fasted over 3 weeks followed by 2 weeks feeding) in a well's fresh water flow-through rearing plan. Sampling occurred at 0, 1, 2, 4, 7, 14 days during the refeeding period. At day 0 and throughout the feeding period until day 14, the weight of the fish was significantly affected by the feeding restriction. Feed deprivation reduced significantly the viscerosomatic and hepatosomatic indexes. Brush border membrane enzymes' specific activity was modulated by feeding regimes until day 7, to level in all experimental groups at day 14. At the end of the restricted/fasted period, the microbiota of the C group was made up of 70% of Actinobacteria, 24% of Proteobacteria, 4.2% of Firmicutes and < 1% of Bacteroides, while the restricted and fasted group were characterized by a strong reduction of Actinobacteria, and a significant increase in Bacteroidetes and Firmicutes. The feed deprivation determined a dysbiosis, allowing the development of different commensal or pathogenic bacteria. In conclusion, the effects of 2 weeks of feed deprivation, excluding those related to body weight, are gradually mitigated by refeeding, which allows the restoration of digestive functions and a healthy intestinal microbiota.

Thresholds for Reduction in Fish Growth and Consumption Due to Hypoxia: Implications for Water Quality Guidelines to Protect Aquatic Life

Control of hypoxia is a key element of water quality management, and guidelines are usually based on qualitative reviews of hypoxia impacts. In this study we use segmented regression to identify both thresholds for growth reduction and rate of decline of fish growth and food consumption under hypoxia; and then evaluate whether current freshwater guidelines for dissolved oxygen based on qualitative reviews are consistent with the quantitative analysis of hypoxia thresholds. Segmented regressions were fit to data from published growth-hypoxia studies for freshwater (N = 17) and marine fishes (N = 13). To understand potential drivers of hypoxia tolerance, we also modelled thresholds as simple functions of environmental and ecological covariates for each species including trophic level, marine vs. freshwater environment, maximum fish length, fish weight, and maximum temperature tolerance. The average threshold for growth reduction (G_crit; 5.1 mg·l^-1 DO) and decreased food consumption (C_crit = 5.6 mg·l^-1 DO) were not significantly different, and did not differ between marine and freshwater taxa. However, salmonids showed a significantly steeper decline in growth with increasing hypoxia relative to other taxa. Growth declined by 22% for every mg·l^-1 reduction in DO below average G_crit, and significant regressions indicate that warmwater (R² = 0.25) and smaller-bodied (R² = 0.44) species are more likely to be hypoxia tolerant. Observed mean G_crit and C_crit in the range of 5-6 mg·l^-1 broadly match minimum water quality guidelines for the protection of aquatic life in freshwater in representative industrialized countries. However, this is much higher than the definition of hypoxia typically used in marine systems (2-2.5 mg·l^-1), indicating a need to reconcile definition of hypoxia in the marine environment with empirical data. The principal challenge in freshwater hypoxia management is now translating discretionary guidelines into effective regulatory frameworks to reduce the incidence and severity of hypoxia.

Monthly variations in growth pattern and condition factor of Periophthalmodon septemradiatus (Gobiiformes: Periophthalminae) living along the Bassac River in Viet Nam

Periophthalmodon septemradiatus (Hamilton, 1822) is a unique mudskipper living in the mudbanks from estuarine to riverine regions in the Vietnamese Mekong Delta (VMD), but there is no data on its growth patterns and condition factors that are helpful for fish resource assessment and adaptation understanding. This study was conducted at five sites, from the lower (Soc Trang province) to middle (Can Tho city) and upper (An Giang province) reaches of Bassac River in VMD, to provide knowledge on growth patterns and condition factors to this mudskippers. Fish samples were caught using traps and hands for 24 months, from July 2017 to June 2019, at these five sites. The total length and weight of 3,417 individuals (1,340 females and 2,077 males) varied by sex, season and site (p < 0.001 for all cases). This species exhibited a positive allometric type as the slope (b = 3.06 ± 0.01) of the length-weight relationship (LWR) was >3 (p < 0.001) for both sexes. The growth pattern changed with sex as mudskipper showed isometry in females but positive allometry in males. Maturity also affected fish growth type since it shifted from negative allometry in immature groups to positive allometry in mature groups. The growth pattern of fish changed from isometry in the dry season to positive allometry in the wet season. The mudskipper showed isometry at the lower reaches in Soc Trang but positive allometry at the middle and upper reaches in Can Tho and An Giang. The condition factor (CF) did not change according to sex, size and season, but with month and site variables. The present environmental condition in these studied sites tended to be not good enough for this fish as CF (0.95 ± 0.01) was less than 1 (p < 0.001). The findings provided basic information on the growth and adaptation of P. septemradiatus being helpful in fish adaptation understanding and resource conservation in VMD.

Application of alginate-immobilized microalgae beads as biosorbent for removal of total ammonia and phosphorus from water of African cichlid (Labidochromis lividus) recirculating aquaculture system

Immobilized microalgae are a promising approach to incorporate microalgae in recirculating aquaculture system (RAS) for water purification. In the present study, two types of biosorbents including sodium alginate-immobilized Scenedesmus spp. and Chlorella spp. beads (algal beads) and sodium alginate beads without microalgae (alginate beads) were prepared. In the first experiment (static test), the potential of two biosorbents to remove different concentrations of total ammonia nitrogen (TAN) and total phosphorus (TP) from water was investigated. In the second experiment, two prepared biosorbents were used as biofilter in a RAS for rearing African cichlid (Labidochromis lividus) for 30 days. The survival rate and growth indices of fingerling fish and removal efficiency of two biosorbents for TAN, NO₃^-N, and TP were determined. The results of static test showed that the removal efficiency and uptake capacity of the two biosorbents for TAN and TP increased during 30 days of the experiment, and these values for the algal beads were higher than the alginate beads. The TAN removal efficiency of the two biosorbents increased with increasing TAN concentration from 0.5 to 5 mg L^-1. The application of algal beads in the RAS improved the survival rate, final weight, final length, weight gain, and daily growth index (DGI%) indices of fish compared to those cultured in the RAS containing the alginate beads and the control (P<0.05). The algal and alginate beads decreased the TAN concentration by 42.85% and 28.57% compared to the control after 30 days of cultivation period, respectively. The uptake of nitrate was not observed by the two biosorbents during cultivation period. The TP removal efficiency of algal beads reached 44.90% after 30 days. The findings of this study indicated that the sodium alginate-immobilized microalgae could be considered as a suitable biofilter to be incorporated into a RAS to improve water quality and consequently enhance the growth and health of fish.

Impact evaluation of marking Salmo trutta with Alizarin Red S produced by different manufacturers

Fish otolith marking with the alizarin dye is a commonly used tool in sustainable fishery management. However, the reported effects of this dye on fish health are rather controversial and are possibly linked to differences in the composition of different brands of Alizarin red S (ARS). Laboratory experiments designed to elucidate effects of different concentrations of theoretically the same ARS as indicated by the CAS (Chemical Abstracts Service) number on fish at different development stages were carried out. The acute toxicity of ARS to Salmo trutta was found to be concentration- and fish developmental stage-dependant. Our study results showed that S. trutta sensitivity to ARS varies depending on its developmental stages as follows: fry (50-days after hatching) > alevins (30-days after hatching) > alevins (1-day after hatching). One of the tested ARS brands (purchased from VWR International LLC (Matsonford Road, USA)) was found to be several times more toxic to fish than another (purchased from Sigma-Aldrich (St. Louis, USA)), although according to the certificates of analysis, the tested substances were identical. Survival and growth of the S. trutta fry, which was marked with different ARS brands and stocked in the same natural stream, was investigated for two consecutive years. The results obtained indicate remarkable differences (p < 0.05) in the effects produced by the tested ARS brands, thus confirming our laboratory findings. The performed elemental analysis of the tested ARS dyes revealed significant differences in chemical impurities that these dyes contain. This study has, for the first time, expressed concern about the probable long-term impact of some ARS brands on the marked fish and their potential to bias the results of the studies dealing with ARS-marked fish.

Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals

BACKGROUND

Infectious diseases cause significant production losses in aquaculture every year. Since the gut microbiota plays an essential role in regulating the host immune system, health and physiology, altered gut microbiota compositions are often associated with a diseased status. However, few studies have examined the association between disease severity and degree of gut dysbiosis, especially when the gut is not the site of the primary infection. Moreover, there is a lack of knowledge on whether bath treatment with formalin, a disinfectant commonly used in aquaculture to treat external infections, might affect the gut microbiome as a consequence of formalin ingestion. Here we investigate, through 16S rRNA gene metabarcoding, changes in the distal gut microbiota composition of a captive-reared cohort of 80 Atlantic salmon (Salmo salar L.), in consequence of an external bacterial skin infection due to a natural outbreak and subsequent formalin treatment.

RESULTS

We identified Tenacibaculum dicentrarchi as the causative disease pathogen and we show that the distal gut of diseased salmon presented a different composition from that of healthy individuals. A new, yet undescribed, Mycoplasma genus characterized the gut of healthy salmon, while in the sick fish we observed an increase in terms of relative abundance of Aliivibrio sp., a strain regarded as opportunistic. We also noticed a positive correlation between fish weight and Mycoplasma sp. relative abundance, potentially indicating a beneficial effect for its host. Moreover, we observed that the gut microbiota of fish treated with formalin was more similar to those of sick fish than healthy ones.

CONCLUSIONS

We conclude that external Tenacibaculum infections have the potential of indirectly affecting the host gut microbiota. As such, treatment optimization procedures should account for that. Formalin treatment is not an optimal solution from a holistic perspective, since we observe an altered gut microbiota in the treated fish. We suggest its coupling with a probiotic treatment aimed at re-establishing a healthy community. Lastly, we have observed a positive correlation of Mycoplasma sp. with salmon health and weight, therefore we encourage further investigations towards its potential utilization as a biomarker for monitoring health in salmon and potentially other farmed fish species.

Associations between Biotic Integrity and Sport Fish Populations in Upper Midwest, USA Rivers, with Emphasis on Smallmouth Bass

Indices of biotic integrity (IBIs) are used to assess ecosystem health of streams and rivers. Streams and rivers with high IBI scores should support abundant and healthy populations of recreationally important sport fishes. However, the fundamental assumption that IBI scores and sport fish populations are associated needs to be examined. To verify this assumption, we tested associations between IBI scores and relative abundance of all sport fishes targeted by anglers, with emphasis on relative abundance of four size groups of smallmouth bass Micropterus dolomieu at 54 stream and river reaches in 2012 and 2013. We also tested for associations with smallmouth bass body condition and growth. A total of 13,708 fishes representing 85 species were captured including 11 sport fish species that included 571 smallmouth bass. We found that the maximum potential relative abundance of sport fishes and smallmouth bass size classes, as well as body condition of bass between 180 and 279 mm, could be predicted by IBI scores. We did not observe significant relationships with body condition of other bass size classes or with growth. Whereas abundance patterns were variable at reaches with higher IBI scores, abundance of larger, quality-sized sport fishes were more limited at reaches with IBI scores <30 that were classified as having poor biotic integrity. Maximum potential body condition was predicted to exceed 95, a condition value indicative of healthy fish, at IBI scores exceeding 50, reflective of reaches being classified as either fair, good, or excellent. These results confirm that management activities that enhance or maintain biotic integrity also support high-quality habitat for sport fish. While our findings support using IBIs as an indicator of the fishable goal specified in the United States Clean Water Act, managers should recognize that other factors not necessarily represented by the index can also limit sport fish populations.

Model-based exploration of the variability in lake trout (Salvelinus namaycush) bioaccumulation factors: The influence of physiology and trophic relationships

Because dietary consumption of fish is often a major vector of human exposure to persistent organic pollutants (POPs), much effort is directed toward a quantitative understanding of fish bioaccumulation using mechanistic models. However, many such models fail to explicitly consider how uptake and loss rate constants relate to fish physiology. We calculated the bioaccumulation factors (BAFs) of hypothetical POPs, with octanol-water partition coefficients ranging from 10^4.5 to 10^8.5 , in lake trout (Salvelinus namaycush) with a food-web bioaccumulation model that uses bioenergetics to ensure that physiological parameters applied to a species are internally consistent. We modeled fish in 6 Canadian lakes (Great Slave Lake, Lake Ontario, Source Lake, Happy Isle Lake, Lake Opeongo, and Lake Memphremagog) to identify the factors that cause the BAFs of differently sized lake trout to vary between and within lakes. When comparing differently sized lake trout within a lake, larger fish tend to have the highest BAF because they allocate less energy toward growth than smaller fish and have higher activity levels. When comparing fish from different lakes, the model finds that diet composition and prey energy density become important in determining the BAF, in addition to activity and the amount of total energy allocated to growth. Environ Toxicol Chem 2019;38:831-840. © 2019 SETAC.

The influence of sample distribution on growth model output for a highly-exploited marine fish, the Gulf Corvina (Cynoscion othonopterus)

Estimating the growth of fishes is critical to understanding their life history and conducting fisheries assessments. It is imperative to sufficiently sample each size and age class of fishes to construct models that accurately reflect biological growth patterns, but this may be a challenging endeavor for highly-exploited species in which older fish are rare. Here, we use the Gulf Corvina (Cynoscion othonopterus), a vulnerable marine fish that has been persistently overfished for two decades, as a model species to compare the performance of several growth models. We fit the von Bertalanffy, Gompertz, logistic, Schnute, and Schnute–Richards growth models to length-at-age data by nonlinear least squares regression and used simple indicators to reveal biased data and ensure our results were biologically feasible. We then explored the consequences of selecting a biased growth model with a per-recruit model that estimated female spawning-stock-biomass-per-recruit and yield-per-recruit. Based on statistics alone, we found that the Schnute–Richards model described our data best. However, it was evident that our data were biased by a bimodal distribution of samples and underrepresentation of large, old individuals, and we found the Schnute–Richards model output to be biologically implausible. By simulating an equal distribution of samples across all age classes, we found that sample distribution distinctly influenced model output for all growth models tested. Consequently, we determined that the growth pattern of the Gulf Corvina was best described by the von Bertalanffy growth model, which was the most robust to biased data, comparable across studies, and statistically comparable to the Schnute–Richards model. Growth model selection had important consequences for assessment, as the per-recruit model employing the Schnute–Richards model fit to raw data predicted the stock to be in a much healthier state than per-recruit models employing other growth models. Our results serve as a reminder of the importance of complete sampling of all size and age classes when possible and transparent identification of biased data when complete sampling is not possible.

Proteomic comparison of selective breeding and growth hormone transgenesis in fish: Unique pathways to enhanced growth

In fish used for food production and scientific research, fast growth can be achieved via selective breeding or induced instantaneously via growth hormone (GH) transgenesis (GHT). The proteomic basis for these distinct routes towards a similar higher phenotype remains uncharacterized, as are associated implications for health parameters. We addressed this knowledge gap using skeletal muscle proteomics in coho salmon (Oncorhynchus kisutch), hypothesising that i) selective breeding and GHT are underpinned by both parallel and unique changes in growth systems, and ii) rapidly-growing fish strains have lowered scope to allocate resources towards immune function. Quantitative profiling of GHT and growth-selected strains was done in comparison to wild-type after injection with PBS (control) or Poly I:C (to mimic infection). We identified remodelling of the muscle proteome in each growth-enhanced strain that was strikingly non-overlapping. GHT was characterized by focal upregulation of systems driving protein synthesis, while the growth-selected fish presented a larger and more diverse set of changes, consistent with complex alterations to many metabolic and cellular pathways. Poly I:C had little detectable effect on the muscle proteome. This study demonstrates that distinct proteome profiles can explain outwardly similar enhanced growth phenotypes, improving our understanding of growth mechanisms in anthropogenic animal strains.

Significance

This work provides the first proteomic insights into mechanisms underpinning different anthropogenic routes to rapid growth in salmon. High-throughput proteomic profiling was used to reveal changes supporting enhanced growth, comparing skeletal muscle of growth hormone transgenic (GHT) and selectively-bred salmon strains with their wild-type counterparts. Contrasting past mRNA-level comparisons of the same fish strains, our data reveals a surprisingly substantial proteomic divergence between the GHT and selectively bred strains. The findings demonstrate that many unique molecular mechanisms underlie growth-enhanced phenotypes in different types of fish strain used for food production and scientific research.

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Mechanistic basis for rapid growth poorly understood in fish.

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Comparative proteomic profiling done in fish strains showing highly enhanced growth.

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Distinct basis for enhanced growth comparing transgenic and domesticated fish strains.

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Highly distinct proteome profiles may explain outwardly similar growth phenotypes.

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Study enhances understanding of how rapid growth is achieved in anthropogenic animal strains.

Historical legacies of river pollution reconstructed from fish scales

Many rivers have been impacted by heavy metal pollution in the past but the long-term legacies on biodiversity are difficult to estimate. The River Ulla (NW Spain) was impacted by tailings from a copper mine during the 1970-1980s but absence of baseline values and lack of subsequent monitoring have prevented a full impact assessment. We used archived fish scales of Atlantic salmon to reconstruct levels of historical copper pollution and its effects on salmon fitness. Copper bioaccumulation significantly increased over baseline values during the operation of the mine, reaching sublethal levels for salmon survival. Juvenile growth and relative population abundance decreased during mining, but no such effects were observed in a neighbouring river unaffected by mining. Our results indicate that historical copper exposure has probably compromised the fitness of this Atlantic salmon population to the present day, and that fish scales are suitable biomarkers of past river pollution.

Application of food waste based diets in polyculture of low trophic level fish: effects on fish growth, water quality and plankton density

Food waste was collected from local hotels and fish feed pellets were produced for a 6 months long field feeding trial. Three types of fish feed pellets (control diet: Jinfeng® 613 formulated feed, contains mainly fish meal, plant product and fish oil; Diet A: food waste based diet without meat and 53% cereal; Diet B: food waste based diet with 25% meat and 28% cereal) were used in polyculture fish ponds to investigate the growth of fish (grass carp, bighead and mud carp), changes in water quality and plankton density. No significant differences in the levels of nitrogen and phosphorous compounds of water body were observed between 3 fish ponds after the half-year feeding trial, while pond receiving Diet A had the highest density of plankton. The food waste combination of Diet B seems to be a better formulation in terms of the overall performance on fish growth.

A new model for simulating growth in fish

A real dynamic population model calculates change in population sizes independent of time. The Beverton & Holt (B&H) model commonly used in fish assessment includes the von Bertalanffy growth function which has age or accumulated time as an independent variable. As a result the B&H model has to assume constant fish growth. However, growth in fish is highly variable depending on food availability and environmental conditions. We propose a new growth model where the length increment of fish living under constant conditions and unlimited food supply, decreases linearly with increasing fish length until it reaches zero at a maximal fish length. The model is independent of time and includes a term which accounts for the environmental variation. In the present study, the model was validated in zebrafish held at constant conditions. There was a good fit of the model to data on observed growth in Norwegian spring spawning herring, capelin from the Barents Sea, North Sea herring and in farmed coastal cod. Growth data from Walleye Pollock from the Eastern Bering Sea and blue whiting from the Norwegian Sea also fitted reasonably well to the model, whereas data from cod from the North Sea showed a good fit to the model only above a length of 70 cm. Cod from the Barents Sea did not grow according to the model. The last results can be explained by environmental factors and variable food availability in the time under study. The model implicates that the efficiency of energy conversion from food decreases as the individual animal approaches its maximal length and is postulated to represent a natural law of fish growth.