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Klein L, Gerdes U, Blome S, Campe A, Grosse Beilage E. Biosecurity measures for the prevention of African swine fever on German pig farms: comparison of farmers' own appraisals and external veterinary experts' evaluations. Porcine Health Manag 2024; 10:14. [PMID: 38468332 PMCID: PMC10926670 DOI: 10.1186/s40813-024-00365-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Accepted: 03/03/2024] [Indexed: 03/13/2024] Open
Abstract
BACKGROUND Since its first introduction into the German wild boar population in 2020, African swine fever (ASF) has been spreading slowly from the eastern border westwards and has been introduced into eight domestic pig farms thus far. The European Food Safety Authority has named deficits in farm biosecurity and increased human activity as major risk factors for the introduction of the ASF virus into pig farms. Studies have shown that pig farms in Germany generally have a high level of biosecurity. However, veterinary practitioners and policy-makers have expressed concerns that not all pig farmers are appropriately prepared to deal with the threat of ASF. This study aimed to evaluate the level of biosecurity on pig farms in Lower Saxony and explore the reasons for deficits in the implementation of biosecurity measures. For this purpose, pig farmers were interviewed in open structured face-to-face interviews about their perception of ASF and biosecurity, and the implemented measures on their farms were assessed with a checklist. In the data analysis, the farmers' answers and the results of the biosecurity check were compared to gain further insights into the factors influencing the implementation of biosecurity measures on the farms. RESULTS The biosecurity check showed that on most farms, a high level of biosecurity had been implemented. Nevertheless, deficits were found concerning the fences and the delimitation of clean and dirty areas on farm grounds and in the anteroom. Overall, the farmers were well informed about ASF and had a realistic perception of their own biosecurity. They considered the farm layout, financial means and practicality of hygiene measures to be the main barriers to implementing biosecurity measures against ASF. However, the results also suggested that farmers' attitudes and legal regulations were major influencing factors. CONCLUSION The results indicated a high level of biosecurity against ASF on most pig farms and a realistic perception of their own biosecurity by the farmers. Current knowledge transfer and information should focus on building upon the farmers' own motivation and expertise and supporting them to put existing knowledge into practice.
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Affiliation(s)
- Leonie Klein
- Department of Biometry, Epidemiology and Information Processing, WHO Collaborating Centre for Research and Training for Health in the Human-Animal-Environment Interface, University for Veterinary Medicine, Hannover, Buenteweg 2, 30559, Hannover, Germany.
| | - Ursula Gerdes
- Niedersaechsische Tierseuchenkasse (Animal Disease Fund), Bruehlstrasse 9, 30169, Hannover, Germany
| | - Sandra Blome
- Department of Virology, Friedrich-Loeffler-Institute, Federal Research Institute for Animal Health, Suedufer 10, 17493, Greifswald - Insel Riems, Germany
| | - Amely Campe
- Department of Biometry, Epidemiology and Information Processing, WHO Collaborating Centre for Research and Training for Health in the Human-Animal-Environment Interface, University for Veterinary Medicine, Hannover, Buenteweg 2, 30559, Hannover, Germany
| | - Elisabeth Grosse Beilage
- Field Station for Epidemiology, University for Veterinary Medicine, Hannover, Buescheler Strasse 9, 49456, Bakum, Germany
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Wang J, Shi Z, Hu X. Status, evaluation, and influencing factors of biosecurity levels in pig farms in China. BMC Vet Res 2023; 19:272. [PMID: 38087269 PMCID: PMC10717797 DOI: 10.1186/s12917-023-03827-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 11/27/2023] [Indexed: 12/18/2023] Open
Abstract
BACKGROUND Animal diseases have always been a serious threat to livestock breeding, and the establishment of a biosecurity barrier is important for disease prevention and control. Based on the investigations conducted in seven provinces located farms, this study aimed to explore the current biosecurity levels of farms in China, construct a biosecurity evaluation system, calculate the biosecurity levels of farms using the rank sum ratio comprehensive evaluation method, and develop an empirical analysis of the factors influencing biosecurity levels. RESULTS The results show that the greater the cost of biosecurity invested, the greater the level of biosecurity. Male farmers, educational attainment and participation in technical training had a significant positive effect on biosecurity levels. In addition, biosecurity levels first decreased and then increased as the scale of farming increased. The study also found that the more people in the household engaged in farming, the higher the biosecurity level of the farm. And farms that joined cooperatives had higher levels of biosecurity. CONCLUSION The rank sum ratio method can evaluate the index system, so as to obtain a comprehensive index RSR value that can be compared, and the operation steps are simple and effective. By taking measures such as improving the comprehensive quality of farmers and increasing the investment in human, material and financial resources for biosecurity, the biosecurity level of farms can be effectively improved and animal diseases can be effectively prevented and controlled.
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Affiliation(s)
- Jiamei Wang
- Institute of Agricultural Economics and Development, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Zizhong Shi
- Institute of Agricultural Economics and Development, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Xiangdong Hu
- Institute of Agricultural Economics and Development, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
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Suwannarong K, Kanthawee P, Thammasutti K, Ponlap T, Klinnoi A, Lantican C, Amonsin A. A qualitative study on knowledge, attitude, and practice (KAP) toward swine influenza, information on pig farms and zoonosis reporting systems in Thailand. Prev Vet Med 2023; 219:106020. [PMID: 37696206 DOI: 10.1016/j.prevetmed.2023.106020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 08/17/2023] [Accepted: 08/29/2023] [Indexed: 09/13/2023]
Abstract
This qualitative study aimed to determine knowledge, attitudes, and practices (KAP) on swine influenza (SIV) among pig farm owners, pig farm workers, community leaders, public health personnel, and villagers who lived nearby pig farms in the northeastern (Nakhon Ratchasima), northern (Chiang Mai), and central (Nakhon Pathom) provinces of Thailand during May to December 2022. The qualitative information was collected from 91 respondents, including 33 individuals who participated in key informant interviews (KIIs) and 58 individuals who joined ten focus group discussions (FGDs) (5-7 persons per FGD). Our results showed that pig farmers, farm workers, and villagers lacked SIV-related knowledge and did not employ preventive measures. Some respondents had limited access to information about causes, clinical symptoms, treatment, and appropriate practices resulting in inadequate knowledge, attitudes, and practices regarding zoonotic diseases, especially SIV. Some pig farmers and farm workers reported seeking information about SIV infection from various sources; however, relevant authorities lacked dissemination of information regarding SIV to community members. The study suggested that healthcare personnel and relevant agencies should adopt a community-based approach to prevent swine influenza. This can be achieved by organizing health education and community communication interventions and involving those who have had contact with pigs or reside near pig farms. This will help increase community awareness and knowledge of swine influenza.
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Affiliation(s)
- Kanokwan Suwannarong
- Center of Excellence for Emerging and Re-emerging Infectious Diseases in Animals, Chulalongkorn University, Bangkok, Thailand
| | | | | | | | - Achara Klinnoi
- Nakhon Ratchasima Provincial Health Office, Muang, Nakhon Ratchasima, Thailand
| | | | - Alongkorn Amonsin
- Center of Excellence for Emerging and Re-emerging Infectious Diseases in Animals, Chulalongkorn University, Bangkok, Thailand.
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Lee GY, Lee HH, Yang SJ. Antimicrobial resistance profiles and clonal diversity of Staphylococcus epidermidis isolates from pig farms, slaughterhouses, and retail pork. Vet Microbiol 2023; 282:109753. [PMID: 37116422 DOI: 10.1016/j.vetmic.2023.109753] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 04/17/2023] [Accepted: 04/22/2023] [Indexed: 04/30/2023]
Abstract
Livestock-associated coagulase-negative staphylococci (CoNS), such as Staphylococcus (S.) epidermidis, have emerged as a significant reservoir of antimicrobial resistance (AMR). In the current study, the AMR profiles and genetic diversity of S. epidermidis isolates obtained from pig farms, slaughterhouses, and retail pork were analyzed. A total of 89 S. epidermidis isolates, comprising 22 methicillin-resistant (MRSE) and 67 methicillin-susceptible S. epidermidis (MSSE) isolates, were assessed to determine (i) the clonal lineages of the isolates [multilocus sequence (MLST), agr, and staphylococcal cassette chromosome mec (SCCmec) types], (ii) the profiles of AMR phenotypes, and (iii) the carriage of genetic factors associated with major AMR phenotypes and zinc chloride resistance. Two dominant clonal lineages of S. epidermidis, ST100 and ST570, were observed on pig farms, especially in healthy pigs. In addition, potential transmission of pig-associated ST100 MRSE-SCCmec V and ST100 MSSE to farm workers was identified. The high prevalence of ST100 and ST570 isolates in pig farms was associated with high levels of AMR and zinc chloride resistance. In relation to resistance phenotypes, higher carriage rates of resistance genes, such as β-lactams (mecA), phenicols (fexA), and tetracyclines [tet(K), tet(L), tet(S), tet(M), and tet(O)], were identified in pig farm-associated isolates. Furthermore, cfr-mediated linezolid resistance was detected in 14 MSSE isolates from pig farms. This study is the first to provide important insights into the clonal structures and AMR profiles of S. epidermidis isolates collected from healthy pigs, carcass/pork samples, and human workers in Korea.
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Affiliation(s)
- Gi Yong Lee
- Department of Veterinary Microbiology, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Republic of Korea
| | - Haeng Ho Lee
- Department of Animal Science and Technology, Chung-Ang University, Anseong 17546, Republic of Korea
| | - Soo-Jin Yang
- Department of Veterinary Microbiology, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Republic of Korea.
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Grudlewska-Buda K, Skowron K, Bauza-Kaszewska J, Budzyńska A, Wiktorczyk-Kapischke N, Wilk M, Wujak M, Paluszak Z. Assessment of antibiotic resistance and biofilm formation of Enterococcus species isolated from different pig farm environments in Poland. BMC Microbiol 2023; 23:89. [PMID: 36997857 PMCID: PMC10061711 DOI: 10.1186/s12866-023-02834-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 03/22/2023] [Indexed: 04/01/2023] Open
Abstract
BACKGROUND Enteroccocus spp. are human opportunistic pathogens causing a variety of serious and life-threating infections in humans, including urinary tract infection, endocarditis, skin infection and bacteraemia. Farm animals and direct contact with them are important sources of Enterococcus faecalis (EFA) and Enterococcus faecium (EFM) infections among farmers, veterinarians and individuals working in breeding farms and abattoirs. The spread of antibiotic-resistant strains is one of the most serious public health concerns, as clinicians will be left without therapeutic options for the management of enterococcal infections. The aim of the study was to evaluate the occurrence and antimicrobial susceptibility of EFA and EFM strains isolated from a pig farm environment and to determine the biofilm formation ability of identified Enterococcus spp. strains. RESULTS A total numer of 160 enterococcal isolates were obtained from 475 samples collected in total (33.7%). Among them, 110 of genetically different strains were identified and classified into EFA (82; 74.5%) and EFM (28; 25.5%). Genetic similarity analysis revealed the presence of 7 and 1 clusters among the EFA and EFM strains, respectively. The highest percentage of EFA strains (16; 19.5%) was resistant to high concentrations of gentamicin. Among the EFM strains, the most frequent strains were resistant to ampicillin and high concentrations of gentamicin (5 each; 17.9%). Six (7.3%) EFA and 4 (14.3%) EFM strains showed vancomycin resistance (VRE - Vancomycin-Resistant Enterococcus). Linezolid resistance was found in 2 strains of each species. The multiplex PCR analysis was performed to identify the vancomycin resistant enterococci. vanB, vanA and vanD genotypes were detected in 4, 1 and 1 EFA strains, respectively. Four EFA VRE-strains in total, 2 with the vanA and 2 with the vanB genotypes, were identified. The biofilm analysis revealed that all vancomycin-resistant E. faecalis and E. faecium strains demonstrated a higher biofilm-forming capacity, as compared to the susceptible strains. The lowest cell count (5.31 log CFU / cm2) was reisolated from the biofilm produced by the vancomycin-sensitive strain EFM 2. The highest level of re-isolated cells was observed for VRE EFA 25 and VRE EFM 7 strains, for which the number was 7 log CFU / cm2 and 6.75 log CFU / cm2, respectively. CONCLUSIONS The irrational use of antibiotics in agriculture and veterinary practice is considered to be one of the key reasons for the rapid spread of antibiotic resistance among microorganisms. Owing to the fact that piggery environment can be a reservoir of antimicrobial resistance and transmission route of antimicrobial resistance genes from commensal zoonotic bacteria to clinical strains, it is of a great importance to public health to monitor trends in this biological phenomenon.
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Affiliation(s)
- Katarzyna Grudlewska-Buda
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Krzysztof Skowron
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Toruń, Poland.
| | - Justyna Bauza-Kaszewska
- Department of Microbiology and Food Technology, Bydgoszcz University of Science and Technology, Bydgoszcz, Poland
| | - Anna Budzyńska
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Natalia Wiktorczyk-Kapischke
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Monika Wilk
- Department of Microbiology, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Magdalena Wujak
- Department of Medicinal Chemistry, Ludwik Rydygier Collegium Medicum in Bydgoszcz, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Zbigniew Paluszak
- Department of Microbiology and Food Technology, Bydgoszcz University of Science and Technology, Bydgoszcz, Poland
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Ekhlas D, Sanjuán JMO, Manzanilla EG, Leonard FC, Argüello H, Burgess CM. Comparison of antimicrobial resistant Escherichia coli isolated from Irish commercial pig farms with and without zinc oxide and antimicrobial usage. Gut Pathog 2023; 15:8. [PMID: 36829209 PMCID: PMC9951511 DOI: 10.1186/s13099-023-00534-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 02/09/2023] [Indexed: 02/26/2023] Open
Abstract
BACKGROUND The prophylactic use of antimicrobials and zinc oxide (ZnO) in pig production was prohibited by the European Union in 2022 due to potential associations between antimicrobial and heavy metal usage with antimicrobial resistance (AMR) and concerns regarding environmental pollution. However, the effects of their usage on the bacterial AMR profiles on commercial pig farms are still not fully understood and previous studies examining the effect of ZnO have reported contrasting findings. The objective of this study was to examine the effects of antimicrobial and ZnO usage on AMR on commercial pig farms. Faecal and environmental samples were taken on 10 Irish commercial farms, of which 5 farms regularly used ZnO and antimicrobials (amoxicillin or sulphadiazine-trimethoprim) for the prevention of disease. The other 5 farms did not use ZnO or any other form of prophylaxis. Escherichia coli numbers were quantified from all samples using non-supplemented and supplemented Tryptone Bile X-glucuronide agar. RESULTS In total 351 isolates were phenotypically analysed, and the genomes of 44 AmpC/ESBL-producing E. coli isolates from 4 farms were characterised using whole-genome sequencing. Phenotypic analysis suggested higher numbers of multi-drug resistant (MDR) E. coli isolates on farms using prophylaxis. Furthermore, farms using prophylaxis were associated with higher numbers of isolates resistant to apramycin, trimethoprim, tetracycline, streptomycin, and chloramphenicol, while resistance to ciprofloxacin was more associated with farms not using any prophylaxis. Thirty-four of the 44 AmpC/ESBL-producing E. coli strains harboured the blaCTX-M-1 resistance gene and were multi drug resistant (MDR). Moreover, network analysis of plasmids and analysis of integrons showed that antimicrobial and biocide resistance genes were frequently co-located on mobile genetic elements, indicating the possibility for co-selection during antimicrobial or biocide usage as a contributor to AMR occurrence and persistence on farms. CONCLUSIONS The results of this study showed evidence that antimicrobial and ZnO treatment of pigs post-weaning can favour the selection and development of AMR and MDR E. coli. Co-location of resistance genes on mobile genetic elements was observed. This study demonstrated the usefulness of phenotypic and genotypic detection of antimicrobial resistance by combining sequencing and microbiological methods.
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Affiliation(s)
- Daniel Ekhlas
- grid.6435.40000 0001 1512 9569Food Safety Department, Teagasc Food Research Centre, Ashtown, Dublin, Ireland ,grid.7886.10000 0001 0768 2743School of Veterinary Medicine, University College Dublin, Dublin, Ireland ,grid.6435.40000 0001 1512 9569Pig Development Department, Teagasc Moorepark, Fermoy, Co. Cork Ireland
| | - Juan M. Ortiz Sanjuán
- grid.6435.40000 0001 1512 9569Pig Development Department, Teagasc Moorepark, Fermoy, Co. Cork Ireland ,grid.411901.c0000 0001 2183 9102Grupo de Genómica Y Mejora Animal, Departamento de Genética, Facultad de Veterinaria, Universidad de Córdoba, Córdoba, Spain
| | - Edgar G. Manzanilla
- grid.7886.10000 0001 0768 2743School of Veterinary Medicine, University College Dublin, Dublin, Ireland ,grid.6435.40000 0001 1512 9569Pig Development Department, Teagasc Moorepark, Fermoy, Co. Cork Ireland
| | - Finola C. Leonard
- grid.7886.10000 0001 0768 2743School of Veterinary Medicine, University College Dublin, Dublin, Ireland
| | - Héctor Argüello
- grid.4807.b0000 0001 2187 3167Animal Health Department, Veterinary Faculty, Universidad de León, León, Spain
| | - Catherine M. Burgess
- grid.6435.40000 0001 1512 9569Food Safety Department, Teagasc Food Research Centre, Ashtown, Dublin, Ireland
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Di Cesare A, Frangipani E, Citterio B, Sabatino R, Corno G, Fontaneto D, Mangiaterra G, Bencardino D, Zoppi S, Di Blasio A, Desiato R, Ru G, Marchis D. Class 1 integron and Enterococcus spp. abundances in swine farms from the " Suckling piglets" to the "Fatteners" production category. Vet Microbiol 2022; 274:109576. [PMID: 36155350 DOI: 10.1016/j.vetmic.2022.109576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 09/05/2022] [Accepted: 09/16/2022] [Indexed: 10/31/2022]
Abstract
Swine farms are considered a hotspot of antimicrobial resistance and may contribute to the spread of antibiotic-resistant and/or pathogenic bacteria into the environment as well as to farm workers. In this study, swine fecal samples have been collected over the primary production, selecting three categories, i.e., "Suckling piglets", "Weaning pigs" and "Fatteners", in six intensive swine farms, for two years. Feces were analysed for the detection and abundance of class 1 integrons (used as proxy of antibiotic resistance and of anthropogenic pollution), and of enterococci [fecal indicator bacteria (FIB) and potentially pathogenic for humans] by quantitative Real Time PCR. Furthermore, Enterococcus faecalis and Enterococcus faecium were isolated, analysed for the presence of the intI1 gene by Real Time PCR and genetically typed by Pulsed-Field Gel Electrophoresis. Both enterococci and class 1 integrons were significantly more abundant in the Suckling piglets (p = 0.0316 and 0.0242, respectively). About 8% of the isolated enterococci were positive for the intI1 gene by Real Time PCR. E. faecalis and E. faecium were found genetically heterogeneous and no specific pattern could be identified as the driver for their presence along the pig primary production. These findings suggest that the "Suckling piglets" category of production represents the key point where to mitigate the risk of transmission of enterococci and class 1 integrons with associated antibiotic resistance genes to humans and spread into the environment.
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Affiliation(s)
- Andrea Di Cesare
- Water Research Institute (IRSA) - MEG Molecular Ecology Group, CNR - National Research Council of Italy, Largo Tonolli 50, 28922, Verbania, Italy.
| | - Emanuela Frangipani
- Department of Biomolecular Sciences, University of Urbino Carlo Bo, Urbino, Italy
| | - Barbara Citterio
- Department of Biomolecular Sciences, University of Urbino Carlo Bo, Urbino, Italy
| | - Raffaella Sabatino
- Water Research Institute (IRSA) - MEG Molecular Ecology Group, CNR - National Research Council of Italy, Largo Tonolli 50, 28922, Verbania, Italy
| | - Gianluca Corno
- Water Research Institute (IRSA) - MEG Molecular Ecology Group, CNR - National Research Council of Italy, Largo Tonolli 50, 28922, Verbania, Italy
| | - Diego Fontaneto
- Water Research Institute (IRSA) - MEG Molecular Ecology Group, CNR - National Research Council of Italy, Largo Tonolli 50, 28922, Verbania, Italy
| | | | - Daniela Bencardino
- Department of Biomolecular Sciences, University of Urbino Carlo Bo, Urbino, Italy
| | - Simona Zoppi
- Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta, Torino, Italy
| | - Alessia Di Blasio
- S.C. Sanità Animale, Servizio Veterinario ASL TO3, Pinerolo, Torino, Italy
| | - Rosanna Desiato
- Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta, Torino, Italy
| | - Giuseppe Ru
- Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta, Torino, Italy
| | - Daniela Marchis
- Istituto Zooprofilattico Sperimentale del Piemonte, Liguria e Valle d'Aosta, Torino, Italy
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Zhang RM, Liao MN, Wu JE, Lu XQ, Tan HZ, Sun J, Liao XP, Liu YH. Metagenomic insights into the influence of mobile genetic elements on ARGs along typical wastewater treatment system on pig farms in China. Sci Total Environ 2022; 839:156313. [PMID: 35654190 DOI: 10.1016/j.scitotenv.2022.156313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 05/25/2022] [Accepted: 05/25/2022] [Indexed: 06/15/2023]
Abstract
The wastewater treatment processes (WTP) on pig farms are heavily contaminated by antibiotic resistance genes (ARGs) and mobile genetic elements (MGEs) play an important role in shaping ARG profiles. Here we first employed metagenomic sequencing to follow the diversities and shifts of ARG associated mobile genetic elements (AAMGEs) including insertion sequences (ISs) and plasmids along the WTP for three pig farms in southeast China. The IS average relative abundance rose from the initial pig feces source to the wastewater storage lagoon (WSL) but decreased in the influent and rose in the effluent of the anaerobic digestor (AD). In contrast, plasmids were eliminated rapidly along this process. These results indicated that the AD reduced plasmid copies while IS abundance increased. We found a great diversity ISs, including IS91, ISNCY, IS630 and IS701, were large contributors to the transfer of multi-drug resistance. In addition, the tetracycline resistance genes co-occurred with a greater diversity of ISs than other ARG classes and this likely contributed to the high abundance of tetracycline resistance genes we found. The transfer of ARGs mediated by MGEs along the WTP of pig farms was a key contributor for the ARGs persistence in the environment of pig farms. Collectively, our findings demonstrated different fates for ISs and plasmids along the WTP for pig farms and suggested that AAMGE monitoring served as an important role in controlling ARGs in pig waste.
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Affiliation(s)
- Rong-Min Zhang
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China; Laboratory of Veterinary Pharmacology, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, Guangdong, China
| | - Mei-Na Liao
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China
| | - Jia-En Wu
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China
| | - Xiao-Qing Lu
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China
| | - Hui-Zhen Tan
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China
| | - Jian Sun
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China; Laboratory of Veterinary Pharmacology, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, Guangdong, China
| | - Xiao-Ping Liao
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China; Laboratory of Veterinary Pharmacology, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, Guangdong, China.
| | - Ya-Hong Liu
- National Risk Assessment Laboratory for Antimicrobial Resistance of Animal Original Bacteria, South China Agricultural University, Guangzhou 510642, China; Laboratory of Veterinary Pharmacology, College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China; Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou, Guangdong, China.
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Vechi NT, Jensen NS, Scheutz C. Methane emissions from five Danish pig farms: Mitigation strategies and inventory estimated emissions. J Environ Manage 2022; 317:115319. [PMID: 35642810 DOI: 10.1016/j.jenvman.2022.115319] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 05/12/2022] [Accepted: 05/13/2022] [Indexed: 06/15/2023]
Abstract
This study investigated whole-farm methane emissions from five Danish pig farms with different manure management practices and compared measured emission rates to international and national greenhouse gas inventory emission models. Methane emissions were quantified by using the tracer gas dispersion method. Farms were measured between five and eight times throughout a whole year. One of the farms housed sows and weaners (P1) and the others focused on fattening pigs (P2-P5). The farms had different manure treatment practices including biogasification (P3), acidification (P4-P5) and no manure treatment (liquid slurry) (P1-P2). Quantified methane emissions ranged from 0.2 to 20 kg/h and the highest rates were seen at the farms with fattening pigs and with no manure treatment (P2), while the lowest emissions were detected at farms with manure acidification (P4 and P5). Average methane emission factors (EFs), normalised based on livestock units, were 14 ± 6, 18 ± 9, 8 ± 7, 2 ± 1 and 1 ± 1 g/LU/h, for P1, P2, P3, P4 and P5, respectively. Emissions from fattening pig farms with biogasification (P3) and acidification (P4-P5) facilities were 55% and 91-93% lower, respectively, than from farm with no manure treatment (P2). Inventory models underestimated farm-measured methane emissions on average by 51%, across all models and farms, with the Danish model performing the worst (underestimation of 64%). A revision of model parameters related to manure emissions, such as the estimation of volatile solids excreted and methane conversion factor parameters, could improve model output, although more data needs to be collected to strengthen the conclusions. As one of the first studies assessing whole-pig farm emissions, the results showed the potential of the applied measuring method to identify mitigation strategy efficiencies and highlighted the necessity to investigate inventory model accuracy.
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Affiliation(s)
- Nathalia T Vechi
- Department of Environmental Engineering, Technical University of Denmark, Denmark.
| | - Nina S Jensen
- Department of Environmental Engineering, Technical University of Denmark, Denmark
| | - Charlotte Scheutz
- Department of Environmental Engineering, Technical University of Denmark, Denmark
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10
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Dong Y, Zhang F, Wang Y, Liu P, Liu S, Fan X, Li Y, Lan Z, Li Y, Zhang H, Cui J, Ni B, Li X, Wei R, Huang B, Wang Z. Cross-sectional study on risk factors associated with porcine epidemic diarrhea virus infection in pig farms in Junan county, China. Prev Vet Med 2021; 198:105547. [PMID: 34826730 DOI: 10.1016/j.prevetmed.2021.105547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 10/15/2021] [Accepted: 11/16/2021] [Indexed: 11/22/2022]
Abstract
Porcine epidemic diarrhea (PED) is a highly contagious, intestinal infectious disease in pigs, characterized by severe diarrhea, vomiting and dehydration. PED is widely epidemic in China as well as in many eastern Asian and America countries, causing tremendous losses in pig industry. However, little was known about the disease frequency and the associated risk factors of PED in pig farms. A cross-sectional study was conducted to estimate the herd prevalence and to identify the potential risk factors of porcine epidemic diarrhea virus (PEDV) infection of pig farms (≥100 pigs) in Junan county, China. A two-stage random sampling strategy was adopted, and a total of 751 fecal samples from suckling piglets of 82 farms were collected and tested by RT-PCR and sequencing for PEDV. Meanwhile, information on the putative risk factors of PEDV infection of those farms were collected in forms of questionnaires, followed by a descriptive analysis, univariable and multivariable logistic regression analysis. The results showed that the herd-level true prevalence of PEDV infection of pig farms in Junan was 35.16 % (95 %CI: 22.91-53.89); there were two variables significantly associated with PEDV infection, which were 'having more than 1000 slaughter pigs per annum' (OR = 5.42, 95 %CI: 1.19-24.72), and 'Weaning at 21-25 days' old' (OR = 4.50, 95 %CI:1.25-16.20). The research suggested that PED was highly endemic in pig farms in Junan county; larger herd size and weaning at an earlier age were potential risk factors associated with PEDV infection in pig farms in Junan. This study set an example in the research on herd-level prevalence of PEDV infection and risk factors associated with PEDV infection, and the results were of practical significance for the future planning of prevention and control of PED in Junan or other areas of China.
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11
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Karlsen OM, Sandbu KD, Grøntvedt CA. Findings and measures to eradicate methicillin resistant Staphylococcus aureus clonal complex 7 spa-type t091 in two Norwegian pig farms: a case report. Porcine Health Manag 2021; 7:40. [PMID: 34134786 PMCID: PMC8207631 DOI: 10.1186/s40813-021-00218-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 05/07/2021] [Indexed: 11/10/2022] Open
Abstract
Background The Norwegian LA-MRSA surveillance and control strategy in pig farms has been largely successful in preventing the establishment of MRSA in the pig population by identifying positive pig herds and eradicating MRSA from these. It can, however, be challenging to determine whether a particular type of MRSA is livestock-associated, particularly in cases where there is little evidence available to aid in classification. Case presentation In two Norwegian pig farms linked by trade of live pigs, MRSA CC7 t091 was found in samples from pigs and their environment. Longitudinal sampling, with a time interval of 25 days, in one farm demonstrated an increase in samples positive for MRSA CC7 t091, supporting a classification of the finding as livestock associated. Measures to eradicate MRSA from both farms were imposed by the National Food Safety Authority. Different measures of MRSA sanitation were applied in the two farms, and MRSA was successfully eradicated from both farms. Conclusions A high-cost, labor intensive and a lower-cost, less labor intensive MRSA eradication protocol, both including total depopulation and repopulation were successful in eradicating MRSA CC7 t091 from two case farms.
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Affiliation(s)
| | - K D Sandbu
- Norwegian Food Safety Authority, Felles postmottak, Postboks 383, 2381, Brumunddal, Norway
| | - C A Grøntvedt
- Norwegian Veterinary Institute, P.O. Box 64, 1431, Ås, Norway
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12
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Qin W, Gao Z, Wu S, Bao W. Preliminary analysis of whether mosquitoes can carry and transmit African swine fever. BMC Vet Res 2021; 17:152. [PMID: 33836768 PMCID: PMC8034110 DOI: 10.1186/s12917-021-02865-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Accepted: 03/26/2021] [Indexed: 11/24/2022] Open
Abstract
Background Mosquitoes are important insect vectors, but whether they can carry and transmit African swine fever virus (ASFV) in large-scale pig farms in China is unknown. Results In this study, probe-based qPCR analysis was performed on mosquitoes from five pig farms with ASF virus (ASFV). Analysis of ASFV in 463 mosquitoes yielded negative cycle threshold (CT) value), and detection remained negative after mixing samples from all five pig farms. Conclusions Therefore, mosquitoes appear unlikely to transmit ASFV, and pose little threat to large-scale pig farms. Thus, farms should continue to follow normal mosquito control procedures when formulating strategies for the prevention and control of ASF.
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Affiliation(s)
- Weiyun Qin
- College of Animal Science and Technology, Yangzhou University, 225009, Yangzhou, China
| | - Zhongcheng Gao
- College of Animal Science and Technology, Yangzhou University, 225009, Yangzhou, China
| | - Shenglong Wu
- College of Animal Science and Technology, Yangzhou University, 225009, Yangzhou, China.,Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, 225009, Yangzhou, China
| | - Wenbin Bao
- College of Animal Science and Technology, Yangzhou University, 225009, Yangzhou, China. .,Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, 225009, Yangzhou, China.
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13
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Yan Z, Wang C, Liu T. An analysis of the environmental efficiency of pig farms and its determinants-a field study from China. Environ Sci Pollut Res Int 2020; 27:38084-38093. [PMID: 32621189 DOI: 10.1007/s11356-020-09922-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Accepted: 06/29/2020] [Indexed: 06/11/2023]
Abstract
Environmental efficiency (EE) was the efficiency that simultaneously targets economic benefits and environmental protection, requiring producers to provide higher levels of value under the premise of lower material and energy input and lower emissions. Waste treatment systems play an important place in the reduction of pathogen loading and then influence the environmental efficiency of farms. Based on a field study, take chemical oxygen demand (COD) and total nitrogen (TN) excretion as undesirable outputs, the paper aims to measure the EE considering the difference of waste treatment methods of sample pig farms. Technical efficiency (TE) and the contributing factors of environmental efficiency were also estimated. Results show that the environmental efficiency is significantly lower than technical efficiency. Years in the profession, manure treatment income, and receiving manure treatment subsidies had significant positive effects on environmental efficiency.
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Affiliation(s)
- Zhenyu Yan
- College of Economics and Management, Northwest A&F University, Yangling, China.
| | - Chao Wang
- Hebei Provincial Animal Husbandry Station, Shijiazhuang, China
| | - Tianjun Liu
- College of Economics and Management, Northwest A&F University, Yangling, China
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14
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Ha Z, Li JF, Xie CZ, Li CH, Zhou HN, Zhang Y, Hao PF, Nan FL, Zhang JY, Han JC, Zhang H, Zhuang XY, Guo YC, Lu HJ, Jin NY. First detection and genomic characterization of porcine circovirus 3 in mosquitoes from pig farms in China. Vet Microbiol 2019; 240:108522. [PMID: 31902486 DOI: 10.1016/j.vetmic.2019.108522] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Revised: 11/21/2019] [Accepted: 11/21/2019] [Indexed: 12/31/2022]
Abstract
The porcine circovirus type 3 (PCV3) becomes an important causative agent of swine disease since its discovery in 2016. PCV3 infection exhibits a wide range of clinical syndromes causing substantial economic losses in swine industry. Previous studies have reported the detection of numerous known viruses including circovirus in mosquitoes. However, the transmission of PCV3 in field-caught mosquitoes remains largely unknown. This study aims to detect PCV3 infection in mosquitoes and analyze its genomic characteristics. Here, we performed a PCR to detect the PCV3 in 269 mosquito samples collected from pig farms located in Heilongjiang, Jilin, and Yunnan provinces. The proportion of PCV3-positive mosquitoes was 32.0 % (86/269), ranging from 21.4%-42.5% at farm level, which may imply that mosquito serves as a route of transmission for PCV3. To determine the possible origin of PCV3 in mosquitoes, 80 pig serum samples were collected from the pig farms where mosquito sampling was also performed. The proportion of PCV3-positive farms ranged from 15.0%-30.0 % in which infection of positive pigs positively correlated with mosquitoes carrying the virus. Additionally, we sequenced the entire genome of 6 strains of PCV3 in mosquitoes and 2 strains of PCV3 in pigs. Sequence analysis indicated a 100 % nucleotide similarity between mosquito and pig viral isolates that were all collected from similar farms. Phylogenetic analysis showed that PCV3 could be divided into two clades, PCV3a and PCV3b, and the PCV3 strains isolated in mosquitoes were distributed on the two clades. Our results demonstrate that mosquitoes may serve as a potential transmission vector in the life-cycle of PCV3, revealing possible transmission routes of PCV3.
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Affiliation(s)
- Zhuo Ha
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; College of Veterinary Medicine, Northeast Agricultural University, Harbin, 150030, China
| | - Jin-Feng Li
- College of Veterinary Medicine, Jilin University, Changchun, 130012, China
| | - Chang-Zhan Xie
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; College of Animal Science and Technology, Jilin Agricultural University, Changchun, 130118, China
| | - Cheng-Hui Li
- Medical College, Yanbian University, Yanji, 133002, China
| | | | - Ying Zhang
- College of Veterinary Medicine, Jilin University, Changchun, 130012, China
| | - Peng-Fei Hao
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; College of Veterinary Medicine, Jilin University, Changchun, 130012, China
| | - Fu-Long Nan
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; College of Veterinary Medicine, Jilin University, Changchun, 130012, China
| | - Jin-Yong Zhang
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; College of Animal Science and Technology, Jilin Agricultural University, Changchun, 130118, China
| | - Ji-Cheng Han
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; Medical College, Yanbian University, Yanji, 133002, China
| | - He Zhang
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China
| | - Xin-Yu Zhuang
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China
| | - Ying-Cheng Guo
- Jilin Fengman Area Animal Prevention and Control Center, Jilin, 132013, China
| | - Hui-Jun Lu
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; Jiangsu Co-Innovation Center for the Prevention and Control of Important Animal Infectious Disease and Zoonoses, Yangzhou University, Yangzhou, 225009, China.
| | - Ning-Yi Jin
- Institute of Military Veterinary Medicine, Academy of Military Medical Sciences, Changchun, 130122, China; College of Veterinary Medicine, Northeast Agricultural University, Harbin, 150030, China; Jiangsu Co-Innovation Center for the Prevention and Control of Important Animal Infectious Disease and Zoonoses, Yangzhou University, Yangzhou, 225009, China.
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15
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Huyen LTT, Duteurtre G, Cournut S, Messad S, Hostiou N. Diversity and sustainability of pig farm types in the northern mountains of Vietnam. Trop Anim Health Prod 2019; 51:2583-2593. [PMID: 31230252 DOI: 10.1007/s11250-019-01973-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2018] [Accepted: 06/07/2019] [Indexed: 11/29/2022]
Abstract
Pig farming systems in Vietnam are very diverse but little is known about this diversity. In particular, the different livestock farming systems currently in operation do not have the same capacity to be sustainable. The study aims to categorize farming systems involving pig production and investigate their sustainability. Data were collected from 160 family pig farms and 2 large-scale farms in Mai Son district of Son La province (northwest of Vietnam) using stratified random sampling. The multiple factor analysis method was used to identify different farms and to characterize each type with economic, social, and environmental indicators. The results highlighted four different farm types. Type 1 contained smallholder farms with diversified farm activities. They were mainly farmed by ethnic minorities located in the intermediate highland. They had low labor productivity and relied mainly on crop farming. Pig production was characterized by a low level of economic and social sustainability. Type 2 farms had comparatively less land and crops than other types. They were more specialized in livestock production, had medium-size pig herds, and were engaged in off-farm jobs. They were less dependent on credit or location and performed better with regard to environmental issues than larger farm types. Type 3 was specialized farms with large pig herds. They seemed more sustainable in economic and social components than the other types, but their environmental sustainability was questionable. Type 4 contained large mixed crop-livestock farms. They obtained high income but were more dependent on credit than the other types. In the future, in addition to focusing on large-scale specialized farms, policies should also consider small-scale and diversified farms because of their role in the sustainable development of national pig production.
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Affiliation(s)
- Le Thi Thanh Huyen
- National Institute of Animal Sciences, Thuy Phuong, North Tu Liem, Hanoi, Vietnam.
| | | | - S Cournut
- Université Clermont Auvergne, AgroParisTech, INRA, Irstea, VetAgro Sup, UMR1273 Territoires, 63000, Clermont-Ferrand, France
| | - S Messad
- UMR Selmet, CIRAD, Montpellier, France
| | - N Hostiou
- Université Clermont Auvergne, AgroParisTech, INRA, Irstea, VetAgro Sup, UMR1273 Territoires, 63000, Clermont-Ferrand, France
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16
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Dumont É. Impact of the treatment of NH 3 emissions from pig farms on greenhouse gas emissions. Quantitative assessment from the literature data. N Biotechnol 2018; 46:31-37. [PMID: 29909071 DOI: 10.1016/j.nbt.2018.06.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2017] [Revised: 06/08/2018] [Accepted: 06/08/2018] [Indexed: 10/28/2022]
Abstract
In order to limit ammonia (NH3) emissions from pig farms, various air cleaning solutions are widely applied. However, the literature data report that these systems (chemical scrubbers, bioscrubbers and biofilters) can be both inefficient and promote nitrous oxide (N2O) production. As air cleaning technologies should not contribute to secondary trace gases that may have a stronger environmental impact than the raw gas compounds themselves, the objective of this study was to quantify the effect of NH3 treatment in pig farms on greenhouse gas (GHG) emissions. GHGs (carbon dioxide, methane and nitrous oxide) emitted at the outlet of three different cleaning systems ("chemical scrubber", "bioscrubber" and "bioscrubber + denitrification step") were assessed and compared with the emissions generated by the exhaust air with "no treatment". The calculations show that the chemical scrubber has no effect whereas biological treatments can increase GHG emissions. The use of bioscrubbers alone for NH3 removal can remain acceptable provided that less than 3% of the NH3 entering the apparatus is converted into N2O. In such cases, a maximum increase of 1.9% in GHG emissions could be obtained. Conversely, the addition of a denitrification step to a bioscrubber must be avoided. Increases in overall GHG emissions of up to 25.8% were calculated but more significant increases could occur. With regard to GHG emissions, it is concluded that the use of a chemical scrubber is more suitable than a bioscrubber to treat exhaust air from pig farms.
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Affiliation(s)
- Éric Dumont
- UMR CNRS 6144 GEPEA, IMT Atlantique, Campus de Nantes, La Chantrerie, 4 rue Alfred Kastler, CS 20722, 44307, Nantes Cedex 3, France.
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17
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Beshiru A, Igbinosa IH, Omeje FI, Ogofure AG, Eyong MM, Igbinosa EO. Multi-antibiotic resistant and putative virulence gene signatures in Enterococcus species isolated from pig farms environment. Microb Pathog 2017; 104:90-6. [PMID: 28087492 DOI: 10.1016/j.micpath.2017.01.020] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2016] [Revised: 01/08/2017] [Accepted: 01/10/2017] [Indexed: 11/21/2022]
Abstract
The continuous misuse of antimicrobials in food animals both orally and subcutaneously as therapeutic and prophylactic agents to bacterial infections could be detrimental and contribute to the dissemination of resistant clones in livestock production. The present study was carried out to determine the antibiogram and virulence gene characteristics of Enterococcus species from pig farms. A total of 300 faecal samples were obtained from two pig farms in Benin City between February and July 2016. Standard culture-based and polymerase chain reaction (PCR) assay were adopted in the detection and characterization of the Enterococcus species. Antimicrobial susceptibility profile was determined using disc diffusion method. A total of 268 enterococci isolates were recovered from both farms investigated. In Farm A, 94/95 (99%) of E. faecalis isolates were resistant to clindamycin; while 23/25 (92%) of E. faecium isolates were resistant to clindamycin. In farm B, all E. faecalis isolates 119/119 (100%) were resistant to clindamycin; while 26/29 (90%) of E. faecium isolates were resistant to clindamycin. Virulence gene detected in the enterococci isolates includes aggregation (asa1) [Farm A (E. faecalis 66%, E. faecium 76%), Farm B (E. faecalis 71%, E. faecium 13%)] and others. Multidrug resistant profile of the isolates revealed that 17/95 (18%) of E. faecalis and 3/25 (12%) of E. faecium isolates from Farm A as well as, 16/119 (14%) of E. faecalis and 5/29 (17%) of E. faecium isolates from Farm B were resistant to CLIR, PENR, ERYR, GENR, TETR, MEMR, KANR, and PTZR. The high level of resistance observed in the study and their virulence gene signatures, calls for effective environmental monitoring to circumvent the environmental dissemination of resistant pathogenic clones. Thus environmental hygiene should be provided to food animals to prevent the proliferation and spread of resistant bacteria.
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18
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Mutters NT, Bieber CP, Hauck C, Reiner G, Malek V, Frank U. Comparison of livestock-associated and health care-associated MRSA-genes, virulence, and resistance. Diagn Microbiol Infect Dis 2016; 86:417-421. [PMID: 27640079 DOI: 10.1016/j.diagmicrobio.2016.08.016] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2016] [Revised: 08/17/2016] [Accepted: 08/22/2016] [Indexed: 12/17/2022]
Abstract
Livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA) may colonize and infect humans with close contact to pigs. We compared phenotypic and genotypic differences in resistance and virulence of LA-MRSA isolates from farms and farmers with hospital-acquired methicillin-resistant S. aureus (HA-MRSA) and assessed carriage rates. Samples from pigs (n=330), occupationally exposed personnel (n=63), the farm environment (n=134), and hospital patients (n=220) were obtained. Approximately 50% (166/330) of pigs were MRSA positive. All LA-MRSA were resistant to tetracycline, compared to only 8% of HA-MRSA (P<0.001). In contrast, HA-MRSA isolates showed significantly higher resistance rates to quinolones (81% versus 7%; P<0.001). All strains isolated from occupationally exposed personnel (61.9%; 39/63) belonged to CC398. HA-MRSA isolates were diversely distributed, with predominance of CC5 (62.7%). Human strains carried significantly more virulence genes than porcine strains, especially exotoxins (P<0.001) and immune-evasion cluster genes (P<0.001). There were significant differences in resistance patterns and recognized genotypic virulence loci between LA-MRSA and HA-MRSA.
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Affiliation(s)
- Nico T Mutters
- Department of Infectious Diseases, Heidelberg University Hospital, Im Neuenheimer Feld 324, 69120 Heidelberg, Germany.
| | - Christian P Bieber
- Department of Infectious Diseases, Heidelberg University Hospital, Im Neuenheimer Feld 324, 69120 Heidelberg, Germany; Department for Veterinary Clinical Sciences, Justus-Liebig-University Gießen, Frankfurter Straße 112 D-35392 Gießen, Germany
| | - Catherine Hauck
- Department of Infectious Diseases, Heidelberg University Hospital, Im Neuenheimer Feld 324, 69120 Heidelberg, Germany; Department for Veterinary Clinical Sciences, Justus-Liebig-University Gießen, Frankfurter Straße 112 D-35392 Gießen, Germany
| | - Gerald Reiner
- Department for Veterinary Clinical Sciences, Justus-Liebig-University Gießen, Frankfurter Straße 112 D-35392 Gießen, Germany
| | - Veronika Malek
- Department of Infectious Diseases, Heidelberg University Hospital, Im Neuenheimer Feld 324, 69120 Heidelberg, Germany
| | - Uwe Frank
- Department of Infectious Diseases, Heidelberg University Hospital, Im Neuenheimer Feld 324, 69120 Heidelberg, Germany
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Chiari M, Ferrari N, Bertoletti M, Avisani D, Cerioli M, Zanoni M, Alborali LG, Lanfranchi P, Lelli D, Martin AM, Antonio L. Long-Term Surveillance of Aujeszky's Disease in the Alpine Wild Boar (Sus scrofa). Ecohealth 2015; 12:563-570. [PMID: 26391375 DOI: 10.1007/s10393-015-1064-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Revised: 09/08/2015] [Accepted: 09/09/2015] [Indexed: 06/05/2023]
Abstract
Although wild boar can act as a persistent Aujeszky's disease (AD) reservoir, limited data are available on long-term epidemiology in free-ranging wild boar living in areas where industrial swine herds are limited. Hence, this study provides crucial information, which fills this knowledge gap, on the natural dynamics of AD infection. From 3260 sera sampled during eight hunting seasons, 162 (4.97%) were tested positive. Factors, including the animal's age class, and the sampling year, had significant effects on the probability of the wild boar being seropositive, while wild boar mean abundance per area, yearly abundance and the total number of pig farms, as well as interactions among age, year and sex, were not significant. In particular, a positive trend of seroprevalence was observed over the years, with values ranging from 2.1 to 10.8%. This long-term surveillance showed an increase in seroprevalence with a higher probability of being seropositive in older individuals and the independence of wild boar seropositivity from the likelihood of contact with pigs in the area.
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Affiliation(s)
- Mario Chiari
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy.
| | - Nicola Ferrari
- Department of Veterinary Science and Public Health, Università degli Studi di Milano, Milan, Italy
| | - Marco Bertoletti
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
| | - Dominga Avisani
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
| | - Monica Cerioli
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
| | - Mariagrazia Zanoni
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
| | - Loris G Alborali
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
| | - Paolo Lanfranchi
- Department of Veterinary Science and Public Health, Università degli Studi di Milano, Milan, Italy
| | - Davide Lelli
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
| | - Ana Moreno Martin
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
- National Reference Laboratory for Aujeszky disease, Via Bianchi 7/9, 25124, Brescia, Italy
| | - Lavazza Antonio
- Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna (IZSLER) "Bruno Ubertini", Via Bianchi 7/9, 25124, Brescia, Italy
- National Reference Laboratory for Aujeszky disease, Via Bianchi 7/9, 25124, Brescia, Italy
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20
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Dussadee N, Reansuwan K, Ramaraj R. Potential development of compressed bio-methane gas production from pig farms and elephant grass silage for transportation in Thailand. Bioresour Technol 2014; 155:438-41. [PMID: 24472747 DOI: 10.1016/j.biortech.2013.12.126] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2013] [Revised: 12/27/2013] [Accepted: 12/31/2013] [Indexed: 05/06/2023]
Abstract
This research project evaluated biogas production using anaerobic co-digestion of pig manure and elephant grass silage in large scale to delivered transportation directly for cars. Anaerobic co-digestion was estimated in three full-scale continuously stirred tank reactors (CSTRs) at 40°C. In the form of compressed bio-methane gas (CBG) production was 14,400m(3)/day (CH4 60-70%) amount of CBG was 9600m(3)/day. The procedure was enhanced by using molecular sieve, activated carbon for removal of moisture and CO2 membrane H2S and CO2 respectively. The results were demonstrated the amount of CO2, H2S gas was reduced along with CH4 was improved up to 90% by volume and compressed to 250bar tank pressure gauge to the fuel for cars. The CBG production, methane gas improvement and performance were evaluated before entering the delivered systems according to the energy standards. The production of CBG is advantageous to strengthen the Thailand biogas market.
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Affiliation(s)
- Natthawud Dussadee
- School of Renewable Energy, Maejo University, Sansai, Chiang Mai 50290, Thailand.
| | - Kamoldara Reansuwan
- School of Renewable Energy, Maejo University, Sansai, Chiang Mai 50290, Thailand
| | - Rameshprabu Ramaraj
- School of Renewable Energy, Maejo University, Sansai, Chiang Mai 50290, Thailand
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