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Karimi A, Aga M, Khan T, D'costa SD, Thaware O, White E, Kelley MJ, Gong H, Acott TS. Comparative analysis of traction forces in normal and glaucomatous trabecular meshwork cells within a 3D, active fluid-structure interaction culture environment. Acta Biomater 2024; 180:206-229. [PMID: 38641184 DOI: 10.1016/j.actbio.2024.04.021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 03/26/2024] [Accepted: 04/11/2024] [Indexed: 04/21/2024]
Abstract
This study presents a 3D in vitro cell culture model, meticulously 3D printed to replicate the conventional aqueous outflow pathway anatomical structure, facilitating the study of trabecular meshwork (TM) cellular responses under glaucomatous conditions. Glaucoma affects TM cell functionality, leading to extracellular matrix (ECM) stiffening, enhanced cell-ECM adhesion, and obstructed aqueous humor outflow. Our model, reconstructed from polyacrylamide gel with elastic moduli of 1.5 and 21.7 kPa, is based on serial block-face scanning electron microscopy images of the outflow pathway. It allows for quantifying 3D, depth-dependent, dynamic traction forces exerted by both normal and glaucomatous TM cells within an active fluid-structure interaction (FSI) environment. In our experimental design, we designed two scenarios: a control group with TM cells observed over 20 hours without flow (static setting), focusing on intrinsic cellular contractile forces, and a second scenario incorporating active FSI to evaluate its impact on traction forces (dynamic setting). Our observations revealed that active FSI results in higher traction forces (normal: 1.83-fold and glaucoma: 2.24-fold) and shear strains (normal: 1.81-fold and glaucoma: 2.41-fold), with stiffer substrates amplifying this effect. Glaucomatous cells consistently exhibited larger forces than normal cells. Increasing gel stiffness led to enhanced stress fiber formation in TM cells, particularly in glaucomatous cells. Exposure to active FSI dramatically altered actin organization in both normal and glaucomatous TM cells, particularly affecting cortical actin stress fiber arrangement. This model while preliminary offers a new method in understanding TM cell biomechanics and ECM stiffening in glaucoma, highlighting the importance of FSI in these processes. STATEMENT OF SIGNIFICANCE: This pioneering project presents an advanced 3D in vitro model, meticulously replicating the human trabecular meshwork's anatomy for glaucoma research. It enables precise quantification of cellular forces in a dynamic fluid-structure interaction, a leap forward from existing 2D models. This advancement promises significant insights into trabecular meshwork cell biomechanics and the stiffening of the extracellular matrix in glaucoma, offering potential pathways for innovative treatments. This research is positioned at the forefront of ocular disease study, with implications that extend to broader biomedical applications.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, United States.
| | - Mini Aga
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Taaha Khan
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Siddharth Daniel D'costa
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Omkar Thaware
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, United States
| | - Elizabeth White
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Mary J Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department Integrative Biosciences, School of Dentistry, Oregon Health & Science University, Portland, OR, United States
| | - Haiyan Gong
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA, United States; Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, MA, United States
| | - Ted S Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department Chemical Physiology & Biochemistry, School of Medicine, Oregon Health & Science University, Portland, OR, United States
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De Raeymaeker X, Van Cauwenbergh S, Houben B, Karimi A, Sergeant G, Appeltans B. Magnets and children: a dangerous combination. Acta Chir Belg 2024; 124:156-159. [PMID: 37259806 DOI: 10.1080/00015458.2023.2219086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 05/23/2023] [Indexed: 06/06/2023]
Abstract
BACKGROUND Accidental ingestion of foreign bodies is a common problem in children. Fortunately, the gastrointestinal tract is quite resilient to foreign bodies. On the other hand, the ingestion of magnets can result in enormous morbidity. Because of their natural tendency to firmly adhere they can cause intestinal obstruction, pressure necrosis, fistula formation or perforation. With this case report, we aim to raise awareness of the risks that these magnets pose to children. METHODS We describe a case of intestinal perforation caused by the separate ingestion of multiple magnets from a children's toy (buckyballs, Neodymium spheres) by a two-year-old boy. A search in the Pubmed database showed some publications and varied management guidelines. RESULTS The boy was treated with an exploratory laparoscopy converted to a mini-laparotomy. We removed the four magnets through separate enterotomies. Postoperative recovery was uneventful. The boy was discharged on a postoperative day five and had no complications at three months follow-ups. CONCLUSION Accidental ingestion of multiple magnets is rare but can create a life-threatening situation in children. If the magnets are still in the stomach, endoscopic retrieval is needed. If they are beyond the stomach, in asymptomatic cases close clinical and radiographic vigilance is mandatory. When symptomatic we advise urgent removal. If treated on time, the surgical outcome is good and fast recovery is expected.
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Affiliation(s)
- X De Raeymaeker
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | | | - B Houben
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | - A Karimi
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | - G Sergeant
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | - B Appeltans
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
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Karimi A, Aga M, Khan T, D'costa SD, Cardenas-Riumallo S, Zelenitz M, Kelley MJ, Acott TS. Dynamic traction force in trabecular meshwork cells: A 2D culture model for normal and glaucomatous states. Acta Biomater 2024; 175:138-156. [PMID: 38151067 PMCID: PMC10843681 DOI: 10.1016/j.actbio.2023.12.033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 12/10/2023] [Accepted: 12/20/2023] [Indexed: 12/29/2023]
Abstract
Glaucoma, which is associated with intraocular pressure (IOP) elevation, results in trabecular meshwork (TM) cellular dysfunction, leading to increased rigidity of the extracellular matrix (ECM), larger adhesion forces between the TM cells and ECM, and higher resistance to aqueous humor drainage. TM cells sense the mechanical forces due to IOP dynamic and apply multidimensional forces on the ECM. Recognizing the importance of cellular forces in modulating various cellular activities and development, this study is aimed to develop a 2D in vitro cell culture model to calculate the 3D, depth-dependent, dynamic traction forces, tensile/compressive/shear strain of the normal and glaucomatous human TM cells within a deformable polyacrylamide (PAM) gel substrate. Normal and glaucomatous human TM cells were isolated, cultured, and seeded on top of the PAM gel substrate with embedded FluoSpheres, spanning elastic moduli of 1.5 to 80 kPa. Sixteen-hour post-seeding live confocal microscopy in an incubator was conducted to Z-stack image the 3D displacement map of the FluoSpheres within the PAM gels. Combined with the known PAM gel stiffness, we ascertained the 3D traction forces in the gel. Our results revealed meaningfully larger traction forces in the glaucomatous TM cells compared to the normal TM cells, reaching depths greater than 10-µm in the PAM gel substrate. Stress fibers in TM cells increased with gel rigidity, but diminished when stiffness rose from 20 to 80 kPa. The developed 2D cell culture model aids in understanding how altered mechanical properties in glaucoma impact TM cell behavior and aqueous humor outflow resistance. STATEMENT OF SIGNIFICANCE: Glaucoma, a leading cause of irreversible blindness, is intricately linked to elevated intraocular pressures and their subsequent cellular effects. The trabecular meshwork plays a pivotal role in this mechanism, particularly its interaction with the extracellular matrix. This research unveils an advanced 2D in vitro cell culture model that intricately maps the complex 3D forces exerted by trabecular meshwork cells on the extracellular matrix, offering unparalleled insights into the cellular biomechanics at play in both healthy and glaucomatous eyes. By discerning the changes in these forces across varying substrate stiffness levels, we bridge the gap in understanding between cellular mechanobiology and the onset of glaucoma. The findings stand as a beacon for potential therapeutic avenues, emphasizing the gravity of cellular/extracellular matrix interactions in glaucoma's pathogenesis and setting the stage for targeted interventions in its early stages.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA.
| | - Mini Aga
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Taaha Khan
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Siddharth Daniel D'costa
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | | | - Meadow Zelenitz
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Mary J Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department Integrative Biosciences, School of Dentistry, Oregon Health & Science University, Portland, OR, USA
| | - Ted S Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department Chemical Physiology & Biochemistry, School of Medicine, Oregon Health & Science University, Portland, OR, USA
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Karimi A, Khan S, Razaghi R, Aga M, Rahmati SM, White E, Kelley MJ, Jian Y, Acott TS. Segmental biomechanics of the normal and glaucomatous human aqueous outflow pathway. Acta Biomater 2024; 173:148-166. [PMID: 37944773 PMCID: PMC10841915 DOI: 10.1016/j.actbio.2023.11.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Revised: 10/18/2023] [Accepted: 11/02/2023] [Indexed: 11/12/2023]
Abstract
The conventional aqueous outflow pathway, encompassing the trabecular meshwork (TM), juxtacanalicular connective tissue (JCT), and inner wall endothelium of Schlemm's canal (SC), governs intraocular pressure (IOP) regulation. This study targets the biomechanics of low-flow (LF) and high-flow (HF) regions within the aqueous humor outflow pathway in normal and glaucomatous human donor eyes, using a combined experimental and computational approach. LF and HF TM/JCT/SC complex tissues from normal and glaucomatous eyes underwent uniaxial tensile testing. Dynamic motion of the TM/JCT/SC complex was recorded using customized green-light optical coherence tomography during SC pressurization in cannulated anterior segment wedges. A hyperviscoelastic model quantified TM/JCT/SC complex properties. A fluid-structure interaction model simulated tissue-aqueous humor interaction. FluoSpheres were introduced into the pathway via negative pressure in the SC, with their motion tracked using two-photon excitation microscopy. Tensile test results revealed that the elastic moduli of the LF and HF regions in glaucomatous eyes are 3.5- and 1.5-fold stiffer than the normal eyes, respectively. The FE results also showed significantly larger shear moduli in the TM, JCT, and SC of the glaucomatous eyes compared to the normal subjects. The LF regions in normal eyes demonstrated larger elastic moduli compared to the HF regions in glaucomatous eyes. The resultant strain in the outflow tissues and velocity of the aqueous humor in the FSI models were in good agreement with the digital volume correlation and 3D particle image velocimetry data, respectively. This study uncovers stiffer biomechanical responses in glaucomatous eyes, with LF regions stiffer than HF regions in both normal and glaucomatous eyes. STATEMENT OF SIGNIFICANCE: This study delves into the biomechanics of the conventional aqueous outflow pathway, a crucial regulator of intraocular pressure and ocular health. By analyzing mechanical differences in low-flow and high-flow regions of normal and glaucomatous eyes, this research unveils the stiffer response in glaucomatous eyes. The distinction between regions' properties offers insights into aqueous humor outflow regulation, while the integration of experimental and computational methods enhances credibility. These findings have potential implications for disease management and present a vital step toward innovative ophthalmic interventions. This study advances our understanding of glaucoma's biomechanical basis and its broader impact on ocular health.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA.
| | - Shanjida Khan
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA
| | - Reza Razaghi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Mini Aga
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | | | - Elizabeth White
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Mary J Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department Integrative Biosciences, School of Dentistry, Oregon Health & Science University, Portland, OR, USA
| | - Yifan Jian
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, USA
| | - Ted S Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA; Department Chemical Physiology & Biochemistry, School of Medicine, Oregon Health & Science University, Portland, OR, USA
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Karimi A, Razaghi R, D'costa SD, Torbati S, Ebrahimi S, Rahmati SM, Kelley MJ, Acott TS, Gong H. Implementing new computational methods for the study of JCT and SC inner wall basement membrane biomechanics and hydrodynamics. Comput Methods Programs Biomed 2024; 243:107909. [PMID: 37976613 PMCID: PMC10840991 DOI: 10.1016/j.cmpb.2023.107909] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Revised: 10/28/2023] [Accepted: 10/30/2023] [Indexed: 11/19/2023]
Abstract
PURPOSE The conventional aqueous outflow pathway, which includes the trabecular meshwork (TM), juxtacanalicular tissue (JCT), and the inner wall endothelium of Schlemm's canal (SC), regulates intraocular pressure (IOP) by controlling the aqueous humor outflow resistance. Despite its importance, our understanding of the biomechanics and hydrodynamics within this region remains limited. Fluid-structure interaction (FSI) offers a way to estimate the biomechanical properties of the JCT and SC under various loading and boundary conditions, providing valuable insights that are beyond the reach of current imaging techniques. METHODS In this study, a normal human eye was fixed at a pressure of 7 mm Hg, and two radial wedges of the TM tissues, which included the SC inner wall basement membrane and JCT, were dissected, processed, and imaged using 3D serial block-face scanning electron microscopy (SBF-SEM). Four different sets of images were used to create 3D finite element (FE) models of the JCT and inner wall endothelial cells of SC with their basement membrane. The outer JCT portion was carefully removed as the outflow resistance is not in that region, leaving only the SCE inner wall and a few µm of the tissue, which does contain the resistance. An inverse iterative FE algorithm was then utilized to calculate the unloaded geometry of the JCT/SC complex at an aqueous humor pressure of 0 mm Hg. Then in the model, the intertrabecular spaces, pores, and giant vacuole contents were replaced by aqueous humor, and FSI was employed to pressurize the JCT/SC complex from 0 to 15 mm Hg. RESULTS In the JCT/SC complex, the shear stress of the aqueous humor is not evenly distributed. Areas proximal to the inner wall of SC experience larger stresses, reaching up to 10 Pa, while those closer to the JCT undergo lower stresses, approximately 4 Pa. Within this complex, giant vacuoles with or without I-pore behave differently. Those without I-pores experience a more significant strain, around 14%, compared to those with I-pores, where the strain is roughly 9%. CONCLUSIONS The distribution of aqueous humor wall shear stress is not uniform within the JCT/SC complex, which may contribute to our understanding of the underlying selective mechanisms in the pathway.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR, United States.
| | - Reza Razaghi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Siddharth Daniel D'costa
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Saeed Torbati
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States
| | - Sina Ebrahimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States.
| | | | - Mary J Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department Integrative Biosciences, School of Dentistry, Oregon Health & Science University, Portland, OR, United States.
| | - Ted S Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, United States; Department Chemical Physiology & Biochemistry, School of Medicine, Oregon Health & Science University, Portland, OR, United States.
| | - Haiyan Gong
- Department of Ophthalmology, Boston University School of Medicine, Boston, Massachusetts, United States; Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, Massachusetts, United States.
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Karimi A, Razaghi R, Kelley MJ, Acott TS, Gong H. Biomechanics of the JCT and SC Inner Wall Endothelial Cells with Their Basement Membrane Using 3D Serial Block-Face Scanning Electron Microscopy. Bioengineering (Basel) 2023; 10:1038. [PMID: 37760140 PMCID: PMC10525990 DOI: 10.3390/bioengineering10091038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2023] [Revised: 08/01/2023] [Accepted: 08/30/2023] [Indexed: 09/29/2023] Open
Abstract
BACKGROUND More than ~70% of the aqueous humor exits the eye through the conventional aqueous outflow pathway that is comprised of the trabecular meshwork (TM), juxtacanalicular tissue (JCT), the inner wall endothelium of Schlemm's canal (SC). The flow resistance in the JCT and SC inner wall basement membrane is thought to play an important role in the regulation of the intraocular pressure (IOP) in the eye, but current imaging techniques do not provide enough information about the mechanics of these tissues or the aqueous humor in this area. METHODS A normal human eye was perfusion-fixed and a radial wedge of the TM tissue from a high-flow region was dissected. The tissues were then sliced and imaged using serial block-face scanning electron microscopy. Slices from these images were selected and segmented to create a 3D finite element model of the JCT and SC cells with an inner wall basement membrane. The aqueous humor was used to replace the intertrabecular spaces, pores, and giant vacuoles, and fluid-structure interaction was employed to couple the motion of the tissues with the aqueous humor. RESULTS Higher tensile stresses (0.8-kPa) and strains (25%) were observed in the basement membrane beneath giant vacuoles with open pores. The volumetric average wall shear stress was higher in SC than in JCT/SC. As the aqueous humor approached the inner wall basement membrane of SC, the velocity of the flow decreased, resulting in the formation of small eddies immediately after the flow left the inner wall. CONCLUSIONS Improved modeling of SC and JCT can enhance our understanding of outflow resistance and funneling. Serial block-face scanning electron microscopy with fluid-structure interaction can achieve this, and the observed micro-segmental flow patterns in ex vivo perfused human eyes suggest a hypothetical mechanism.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97208, USA; (R.R.); (M.J.K.); (T.S.A.)
- Department of Biomedical Engineering, Oregon Health & Science University, Portland, OR 97208, USA
| | - Reza Razaghi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97208, USA; (R.R.); (M.J.K.); (T.S.A.)
| | - Mary J. Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97208, USA; (R.R.); (M.J.K.); (T.S.A.)
- Department Integrative Biosciences, School of Dentistry, Oregon Health & Science University, Portland, OR 97208, USA
| | - Ted S. Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97208, USA; (R.R.); (M.J.K.); (T.S.A.)
- Department Chemical Physiology & Biochemistry, School of Medicine, Oregon Health & Science University, Portland, OR 97208, USA
| | - Haiyan Gong
- Department of Ophthalmology, Boston University School of Medicine, Boston, MA 02118, USA;
- Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, MA 02118, USA
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Karimi A, Crouch DJ, Razaghi R, Crawford Downs J, Acott TS, Kelley MJ, Behnsen JG, Bosworth LA, Sheridan CM. Morphological and biomechanical analyses of the human healthy and glaucomatous aqueous outflow pathway: Imaging-to-modeling. Comput Methods Programs Biomed 2023; 236:107485. [PMID: 37149973 DOI: 10.1016/j.cmpb.2023.107485] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/09/2023] [Accepted: 03/13/2023] [Indexed: 05/09/2023]
Abstract
BACKGROUND AND OBJECTIVE Intraocular pressure (IOP) is maintained via a dynamic balance between the production of aqueous humor and its drainage through the trabecular meshwork (TM), juxtacanalicular connective tissue (JCT), and Schlemm's canal (SC) endothelium of the conventional outflow pathway. Primary open angle glaucoma (POAG) is often associated with IOP elevation that occurs due to an abnormally high outflow resistance across the outflow pathway. Outflow tissues are viscoelastic and actively interact with aqueous humor dynamics through a two-way fluid-structure interaction coupling. While glaucoma affects the morphology and stiffness of the outflow tissues, their biomechanics and hydrodynamics in glaucoma eyes remain largely unknown. This research aims to develop an image-to-model method allowing the biomechanics and hydrodynamics of the conventional aqueous outflow pathway to be studied. METHODS We used a combination of X-ray computed tomography and scanning electron microscopy to reconstruct high-fidelity, eye-specific, 3D microstructural finite element models of the healthy and glaucoma outflow tissues in cellularized and decellularized conditions. The viscoelastic TM/JCT/SC complex finite element models with embedded viscoelastic beam elements were subjected to a physiological IOP load boundary; the stresses/strains and the flow state were calculated using fluid-structure interaction and computational fluid dynamics. RESULTS Based on the resultant hydrodynamics parameters across the outflow pathway, the primary site of outflow resistance in healthy eyes was in the JCT and immediate vicinity of the SC inner wall, while the majority of the outflow resistance in the glaucoma eyes occurred in the TM. The TM and JCT in the glaucoma eyes showed 1.32-fold and 1.13-fold larger beam thickness and smaller trabecular space size (2.24-fold and 1.50-fold) compared to the healthy eyes. CONCLUSIONS Characterizing the accurate morphology of the outflow tissues may significantly contribute to constructing more accurate, robust, and reliable models, that can eventually help to better understand the dynamic IOP regulation, hydrodynamics of the aqueous humor, and outflow resistance dynamic in the human eyes. This model demonstrates proof of concept for determining changes to outflow resistance in healthy and glaucomatous tissues and thus may be utilized in larger cohorts of donor tissues where disease specificity, race, age, and gender of the eye donors may be accounted for.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, United States
| | - Devon J Crouch
- Department of Eye and Vision Science, Institute of Life Course and Medical Sciences, Faculty of Health and Life Sciences, University of Liverpool, Liverpool L7 8TX, United Kingdom
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States
| | - J Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States
| | - Ted S Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, United States; Department of Biochemistry and Molecular Biology, Oregon Health & Science University, Portland, Oregon, United States
| | - Mary J Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, United States; Department of Integrative Biosciences, Oregon Health & Science University, Portland, Oregon, United States
| | - Julia G Behnsen
- Department of Mechanical, Materials, and Aerospace Engineering, University of Liverpool, Liverpool, L69 6GB, United Kingdom
| | - Lucy A Bosworth
- Department of Eye and Vision Science, Institute of Life Course and Medical Sciences, Faculty of Health and Life Sciences, University of Liverpool, Liverpool L7 8TX, United Kingdom
| | - Carl M Sheridan
- Department of Eye and Vision Science, Institute of Life Course and Medical Sciences, Faculty of Health and Life Sciences, University of Liverpool, Liverpool L7 8TX, United Kingdom.
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Moradpour S, Entezari M, Ayoubi S, Karimi A, Naimi S. Digital exploration of selected heavy metals using Random Forest and a set of environmental covariates at the watershed scale. J Hazard Mater 2023; 455:131609. [PMID: 37207480 DOI: 10.1016/j.jhazmat.2023.131609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 04/18/2023] [Accepted: 05/08/2023] [Indexed: 05/21/2023]
Abstract
The current study was established for predicting some selected heavy metals (HMs) including Zn, Mn, Fe, Co, Cr, Ni, and Cu, by applying random forest (RF) and a set of environmental covariates at watershed scale. The objectives were to find out the most effective combination of variables and controlling factors on the variability of HMs in a semiarid watershed in central Iran. One hundred locations were selected in the given watershed in the hypercube manner and soil samples from a surface 0-20 cm depth and concentration of HMs and some soil properties were measured in the laboratory. Three scenarios of input variables were defined for HMs prediction. The results revealed that the first scenario (remote sensing + topographic attributes) explained about 27-34% of the variability in HMs. Inclusion of a thematic map to the scenario I, improved the prediction accuracy for all HMs. Scenario III (remote sensing data+ topographic attributes + soil properties) was the most efficient scenario for prediction of HMs with R2 values ranging from 0.32 for Cu to 0.42 for Fe. Similarly, the lowest nRMSE was found for all HMs in scenario III, ranging from 0.271 for Fe to 0.351 for Cu. Among the soil properties, clay content and magnetic susceptibility were the most important variables, and also some remote sensing data (Carbonate index, Soil adjusted vegetation index, Band2, and Band7) and topographic attributes (mainly control soil redistribution along the landscape) were the most efficient variables for estimating HMs. We concluded that the RF model with a combination of remote sensing data, topographic attributes, and assisting of thematic maps such as land use in the studied watershed could reliably predict HMs content.
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Affiliation(s)
- Shohreh Moradpour
- Department of Physical Geography, Faculty of Geographical Sciences and Planning, University of Isfahan, Iran
| | - Mojgan Entezari
- Department of Physical Geography, Faculty of Geographical Sciences and Planning, University of Isfahan, Iran.
| | - Shamsollah Ayoubi
- Department of Soil Science, College of Agriculture, Isfahan University of Technology, 8415683111 Isfahan, Iran
| | - Alireza Karimi
- Department of Soil Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Salman Naimi
- Department of Soil Science, College of Agriculture, Isfahan University of Technology, 8415683111 Isfahan, Iran
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Abdolkarimzadeh F, Ashory MR, Ghasemi-Ghalebahman A, Karimi A. A position- and time-dependent pressure profile to model viscoelastic mechanical behavior of the brain tissue due to tumor growth. Comput Methods Biomech Biomed Engin 2023; 26:660-672. [PMID: 35638726 PMCID: PMC9708950 DOI: 10.1080/10255842.2022.2082245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2022] [Revised: 04/06/2022] [Accepted: 05/23/2022] [Indexed: 11/03/2022]
Abstract
This study proposed a computational framework to calculate the resultant position- and time-dependent pressure profile on the brain tissue due to tumor growth. A finite element (FE) patch of the brain tissue was constructed and an inverse dynamic FE-optimization algorithm was used to calculate its viscoelastic mechanical properties under compressive uniaxial loading. Two patient-specific post-tumor resection FE models were input to the FE-optimization algorithm to calculate the optimized 3rd-order position-dependent and normal distribution time-dependent pressure profile parameters. The optimized viscoelastic material properties, the most suitable simulation time, and the optimized 3rd-order position- and -time-dependent pressure profiles were calculated.
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Affiliation(s)
| | | | | | - Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States
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10
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Karimi A, Khan S, Razaghi R, Rahmati SM, Gathara M, Tudisco E, Aga M, Kelley MJ, Jian Y, Acott TS. Developing an Experimental-Computational Workflow to Study the Biomechanics of the Human Conventional Aqueous Outflow Pathway. Acta Biomater 2023; 164:346-362. [PMID: 37072067 DOI: 10.1016/j.actbio.2023.04.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 03/29/2023] [Accepted: 04/06/2023] [Indexed: 04/20/2023]
Abstract
The aqueous humor actively interacts with the trabecular meshwork (TM), juxtacanalicular tissue (JCT), and Schlemm's canal (SC) through a dynamic fluid-structure interaction (FSI) coupling. Despite the fact that intraocular pressure (IOP) undergoes significant fluctuations, our understanding of the hyperviscoelastic biomechanical properties of the aqueous outflow tissues is limited. In this study, a quadrant of the anterior segment from a normal human donor eye was dynamically pressurized in the SC lumen, and imaged using a customized optical coherence tomography (OCT). The TM/JCT/SC complex finite element (FE) with embedded collagen fibrils was reconstructed based on the segmented boundary nodes in the OCT images. The hyperviscoelastic mechanical properties of the outflow tissues' extracellular matrix with embedded viscoelastic collagen fibrils were calculated using an inverse FE-optimization method. Thereafter, the 3D microstructural FE model of the TM, with adjacent JCT and SC inner wall, from the same donor eye was constructed using optical coherence microscopy and subjected to a flow load-boundary from the SC lumen. The resultant deformation/strain in the outflow tissues was calculated using the FSI method, and compared to the digital volume correlation (DVC) data. TM showed larger shear modulus (0.92 MPa) compared to the JCT (0.47 MPa) and SC inner wall (0.85 MPa). Shear modulus (viscoelastic) was larger in the SC inner wall (97.65 MPa) compared to the TM (84.38 MPa) and JCT (56.30 MPa). The conventional aqueous outflow pathway is subjected to a rate-dependent IOP load-boundary with large fluctuations. This necessitates addressing the biomechanics of the outflow tissues using hyperviscoelastic material-model. STATEMENT OF SIGNIFICANCE: While the human conventional aqueous outflow pathway is subjected to a large-deformation and time-dependent IOP load-boundary, we are not aware of any studies that have calculated the hyperviscoelastic mechanical properties of the outflow tissues with embedded viscoelastic collagen fibrils. A quadrant of the anterior segment of a normal humor donor eye was dynamically pressurized from the SC lumen with relatively large fluctuations. The TM/JCT/SC complex were OCT imaged and the mechanical properties of the tissues with embedded collagen fibrils were calculated using the inverse FE-optimization algorithm. The resultant displacement/strain in the FSI outflow model was validated versus the DVC data. The proposed experimental-computational workflow may significantly contribute to understanding of the effects of different drugs on the biomechanics of the conventional aqueous outflow pathway.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, USA
| | - Shanjida Khan
- Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon, USA
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA
| | | | - Michael Gathara
- Department of Computer Science, University of Alabama at Birmingham, Birmingham, Alabama, USA
| | - Erika Tudisco
- Division of Geotechnical Engineering, Lund University, Lund, Sweden
| | - Mini Aga
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, USA
| | - Mary J Kelley
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, USA; Department Integrative Biosciences, School of Dentistry, Oregon Health & Science University, Portland, Oregon, USA
| | - Yifan Jian
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, USA; Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon, USA
| | - Ted S Acott
- Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, USA; Department Chemical Physiology & Biochemistry, School of Medicine, Oregon Health & Science University, Portland, Oregon, USA.
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Ashrafi F, Heidari A, Farzam M, Karimi A, Amini M. The interactions of Cr (VI) concentrations and amendments (biochar and manure) on growth and metal accumulation of two species of Salicornia in contaminated soil. Environ Sci Pollut Res Int 2023; 30:201-218. [PMID: 35896883 DOI: 10.1007/s11356-022-22138-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Accepted: 07/15/2022] [Indexed: 06/15/2023]
Abstract
Heavy metals are among the most dangerous contaminants in the environment. Organic components and plant species that can accumulate and stabilize heavy metals in their organs are a good option for soil remediation of these elements. Therefore, this study aimed to investigate the effects of manure and biochar on the accumulation of heavy metals by Salicornia species. Salicornia persica Akhani and Salicornia perspolitana Akhani were cultivated outdoor in experimental pots. The effects of experimental treatments, including Cr (VI) concentrations, manure, and biochar on the two studied species, were investigated. The results indicated a significant effect (p < 0.05) of biochar on the accumulation of heavy metals by two species, S. persica and S. perspolitana, so that Cr concentrations in the roots and shoots were 258 and 5.41 mg/kg, respectively. In addition, Cr accumulations under manure treatments in the roots and shoots were 334.34 and 9.79 mg/kg, respectively. The content of photosynthetic pigments in both S. persica and S. perspolitana species under biochar treatment was higher than in control and manure treatments. In general, one can conclude that the accumulation of Cr in S. perspolitana was higher than in S. persica. Applying biochar and manure amendments could stabilize Cr in soil and reduce Cr accumulation in both S. persica and S. perspolitana species.
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Affiliation(s)
- Fahime Ashrafi
- Department of Environmental Science, Faculty of Natural Resources and Environment, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Ava Heidari
- Department of Environmental Science, Faculty of Natural Resources and Environment, Ferdowsi University of Mashhad, Mashhad, Iran.
| | - Mohammad Farzam
- Department of Range and Watershed Management, Faculty of Natural Resources and Environment, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Alireza Karimi
- Department of Soil Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Malihe Amini
- Department of Environmental Science and Engineering, Faculty of Natural Resources, University of Jiroft, P.O. Box: 8767161167, Jiroft, Kerman, Iran.
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Najafi F, Ahmadi H, Maghsoumi A, Huma K, Amini A, Azimi L, Karimi A, Bayat M, Naseri N. Size-dependent molecular interaction of nontraditional 2D antibiotics with Staphylococcus aureus. Biomed Mater 2022; 18. [PMID: 36541547 DOI: 10.1088/1748-605x/aca500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Accepted: 11/22/2022] [Indexed: 11/23/2022]
Abstract
The application of nanomaterials for their antibacterial properties is the subject of many studies due to antibiotic resistance of pathogen bacteria and the necessity of omitting them from food and water resources. Graphene oxide (GO) is one of the most popular candidates for antibacterial application. However, the optimum condition for such an effect is not yet clear for practical purposes. To shed light on how GO and bacteria interaction depends on size, a wide range of GO flake sizes from hundreds of µm2going down to nano-scale as low as 10 N m2was produced. In anin-vitrosystematic study to inhibitStaphylococcus aureusgrowth, the correlation between GO flake size, thickness, functional group density, and antibacterial activity was investigated. The GO suspension with the average size of 0.05 µm2, in the order of the size of the bacteria itself, had the best bacteriostatic effect onS. aureuswith the minimum inhibitory concentration value of 8 μg ml-1, well within the acceptable range for practical use. The bacteriostatic effect was measured to be a 76.2% reduction of the colony count over 2 h of incubation and the mechanism of action was the wrapping and isolation of cells from the growth environment. Furthermore,in-vivoanimal studies revealed that 16 μg ml-1of the optimum GO has efficient antibacterial performance against the methicillin-resistant strains of the bacteria with an enhanced wound healing rate and tensiometrial parameters which is important for realized targets.
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Affiliation(s)
- F Najafi
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| | - H Ahmadi
- Department of Biology and Anatomical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A Maghsoumi
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| | - K Huma
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| | - A Amini
- Department of Biology and Anatomical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - L Azimi
- Pediatric Infections Research Centre, Research Institute for Children's Health, Shahid Beheshti University of Medical Science, Tehran, Iran
| | - A Karimi
- Pediatric Infections Research Centre, Research Institute for Children's Health, Shahid Beheshti University of Medical Science, Tehran, Iran
| | - M Bayat
- Department of Biology and Anatomical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.,Price Institute of Surgical Research, University of Louisville, and Noveratech LLC, Louisville, KY, United States of America
| | - N Naseri
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
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Karimi A, Halabian M, Razaghi R, Downs JC, Kelley MJ, Acott TS. Modeling the Endothelial Glycocalyx Layer in the Human Conventional Aqueous Outflow Pathway. Cells 2022; 11:cells11233925. [PMID: 36497183 PMCID: PMC9740116 DOI: 10.3390/cells11233925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 11/30/2022] [Accepted: 12/03/2022] [Indexed: 12/07/2022] Open
Abstract
A layer of proteoglycans and glycoproteins known as glycocalyx covers the surface of the trabecular meshwork (TM), juxtacanalicular tissue (JCT), and Schlemm's canal (SC) inner wall of the conventional aqueous outflow pathway in the eye. This has been shown to play a role in the mechanotransduction of fluid shear stress and in the regulation of the outflow resistance. The outflow resistance in the conventional outflow pathway is the main determinant of the intraocular pressure (IOP) through an active, two-way, fluid-structure interaction coupling between the outflow tissues and aqueous humor. A 3D microstructural finite element (FE) model of a healthy human eye TM/JCT/SC complex with interspersed aqueous humor was constructed. A very thin charged double layer that represents the endothelial glycocalyx layer covered the surface of the elastic outflow tissues. The aqueous humor was modeled as electroosmotic flow that is charged when it is in contact with the outflow tissues. The electrical-fluid-structure interaction (EFSI) method was used to couple the charged double layer (glycocalyx), fluid (aqueous humor), and solid (outflow tissues). When the IOP was elevated to 15 mmHg, the maximum aqueous humor velocity in the EFSI model was decreased by 2.35 mm/s (9%) compared to the fluid-structure interaction (FSI) model. The charge or electricity in the living human conventional outflow pathway generated by the charged endothelial glycocalyx layer plays a minor biomechanical role in the resultant stresses and strains as well as the hydrodynamics of the aqueous humor.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
- Correspondence:
| | - Mahdi Halabian
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - J. Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - Mary J. Kelley
- Departments of Ophthalmology and Integrative Biosciences, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97239, USA
| | - Ted S. Acott
- Departments of Ophthalmology and Biochemistry and Molecular Biology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97239, USA
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Karimi A, Razaghi R, Rahmati SM, Downs JC, Acott TS, Kelley MJ, Wang RK, Johnstone M. The Effect of Intraocular Pressure Load Boundary on the Biomechanics of the Human Conventional Aqueous Outflow Pathway. Bioengineering (Basel) 2022; 9:672. [PMID: 36354583 PMCID: PMC9687513 DOI: 10.3390/bioengineering9110672] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Revised: 10/28/2022] [Accepted: 11/08/2022] [Indexed: 09/29/2023] Open
Abstract
BACKGROUND Aqueous humor outflow resistance in the trabecular meshwork (TM), juxtacanalicular connective tissue (JCT), and Schlemm's canal (SC) endothelium of the conventional outflow pathway actively contribute to intraocular pressure (IOP) regulation. Outflow resistance is actively affected by the dynamic outflow pressure gradient across the TM, JCT, and SC inner wall tissues. The resistance effect implies the presence of a fluid-structure interaction (FSI) coupling between the outflow tissues and the aqueous humor. However, the biomechanical interactions between viscoelastic outflow tissues and aqueous humor dynamics are largely unknown. METHODS A 3D microstructural finite element (FE) model of a healthy human eye TM/JCT/SC complex was constructed with elastic and viscoelastic material properties for the bulk extracellular matrix and embedded elastic cable elements. The FE models were subjected to both idealized and a physiologic IOP load boundary using the FSI method. RESULTS The elastic material model for both the idealized and physiologic IOP load boundary at equal IOPs showed similar stresses and strains in the outflow tissues as well as pressure in the aqueous humor. However, outflow tissues with viscoelastic material properties were sensitive to the IOP load rate, resulting in different mechanical and hydrodynamic responses in the tissues and aqueous humor. CONCLUSIONS Transient IOP fluctuations may cause a relatively large IOP difference of ~20 mmHg in a very short time frame of ~0.1 s, resulting in a rate stiffening in the outflow tissues. Rate stiffening reduces strains and causes a rate-dependent pressure gradient across the outflow tissues. Thus, the results suggest it is necessary to use a viscoelastic material model in outflow tissues that includes the important role of IOP load rate.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | | | - J. Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - Ted S. Acott
- Departments of Ophthalmology and Biochemistry and Molecular Biology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97239, USA
| | - Mary J. Kelley
- Departments of Ophthalmology and Integrative Biosciences, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97239, USA
| | - Ruikang K. Wang
- Department of Ophthalmology, University of Washington, Seattle, WA 98195, USA
- Department of Bioengineering, University of Washington, Seattle, WA 98195, USA
| | - Murray Johnstone
- Department of Ophthalmology, University of Washington, Seattle, WA 98195, USA
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Karimi A, Razaghi R, Padilla S, Rahmati SM, Downs JC, Acott TS, Kelley MJ, Wang RK, Johnstone M. Viscoelastic Biomechanical Properties of the Conventional Aqueous Outflow Pathway Tissues in Healthy and Glaucoma Human Eyes. J Clin Med 2022; 11:jcm11206049. [PMID: 36294371 PMCID: PMC9605362 DOI: 10.3390/jcm11206049] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 10/11/2022] [Accepted: 10/12/2022] [Indexed: 11/16/2022] Open
Abstract
Background: Although the tissues comprising the ocular conventional outflow pathway have shown strong viscoelastic mechanical response to aqueous humor pressure dynamics, the viscoelastic mechanical properties of the trabecular meshwork (TM), juxtacanalicular connective tissue (JCT), and Schlemm’s canal (SC) inner wall are largely unknown. Methods: A quadrant of the anterior segment from two human donor eyes at low- and high-flow (LF and HF) outflow regions was pressurized and imaged using optical coherence tomography (OCT). A finite element (FE) model of the TM, the adjacent JCT, and the SC inner wall was constructed and viscoelastic beam elements were distributed in the extracellular matrix (ECM) of the TM and JCT to represent anisotropic collagen. An inverse FE-optimization algorithm was used to calculate the viscoelastic properties of the ECM/beam elements such that the TM/JCT/SC model and OCT imaging data best matched over time. Results: The ECM of the glaucoma tissues showed significantly larger time-dependent shear moduli compared to the heathy tissues. Significantly larger shear moduli were also observed in the LF regions of both the healthy and glaucoma eyes compared to the HF regions. Conclusions: The outflow tissues in both glaucoma eyes and HF regions are stiffer and less able to respond to dynamic IOP.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
- Correspondence:
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - Steven Padilla
- Department of Ophthalmology, University of Washington, Seattle, WA 98109, USA
| | | | - J. Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL 35233, USA
| | - Ted S. Acott
- Departments of Ophthalmology and Biochemistry and Molecular Biology, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97239, USA
| | - Mary J. Kelley
- Departments of Ophthalmology and Integrative Biosciences, Casey Eye Institute, Oregon Health & Science University, Portland, OR 97239, USA
| | - Ruikang K. Wang
- Department of Ophthalmology, University of Washington, Seattle, WA 98109, USA
- Department of Bioengineering, University of Washington, Seattle, WA 98105, USA
| | - Murray Johnstone
- Department of Ophthalmology, University of Washington, Seattle, WA 98109, USA
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Karimi A, Razaghi R, Rahmati SM, Girkin CA, Downs JC. Relative Contributions of Intraocular and Cerebrospinal Fluid Pressures to the Biomechanics of the Lamina Cribrosa and Laminar Neural Tissues. Invest Ophthalmol Vis Sci 2022; 63:14. [PMID: 36255364 PMCID: PMC9587471 DOI: 10.1167/iovs.63.11.14] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 09/27/2022] [Indexed: 12/02/2022] Open
Abstract
Purpose The laminar region of the optic nerve head (ONH), thought to be the site of damage to the retinal ganglion cell axons in glaucoma, is continuously loaded on its anterior and posterior surfaces by dynamic intraocular pressure (IOP) and orbital cerebrospinal fluid pressure (CSFP), respectively. Thus, translaminar pressure (TLP; TLP = IOP-CSFP) has been proposed as a glaucoma risk factor. Methods Three eye-specific finite element models of the posterior human eye were constructed, including full 3D microstructures of the load-bearing lamina cribrosa (LC) with interspersed laminar neural tissues (NTs), and heterogeneous, anisotropic, hyperelastic material formulations for the surrounding peripapillary sclera and adjacent pia. ONH biomechanical responses were simulated using three combinations of IOP and CSFP loadings consistent with posture change from sitting to supine. Results Results show that tensile, compressive, and shear stresses and strains in the ONH were higher in the supine position compared to the sitting position (P < 0.05). In addition, LC beams bear three to five times more TLP-driven stress than interspersed laminar NT, whereas laminar NT exhibit three to five times greater strain than supporting LC (P < 0.05). Compared with CSFP, IOP drove approximately four times greater stress and strain in the LC, NT, and peripapillary sclera, normalized per mm Hg pressure change. In addition, IOP drove approximately three-fold greater scleral canal expansion and anterior-posterior laminar deformation than CSFP per mm Hg (P < 0.05). Conclusions Whereas TLP has been hypothesized to play a prominent role in ONH biomechanics, the IOP and CSFP effects are not equivalent, as IOP-driven stress, strain, and deformation play a more dominant role than CSFP effects.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, Alabama, United States
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, Alabama, United States
| | | | - Christopher A. Girkin
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, Alabama, United States
| | - J. Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, Alabama, United States
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Karimi A, Mohammad P. Effect of outdoor thermal comfort condition on visit of tourists in historical urban plazas of Sevilla and Madrid. Environ Sci Pollut Res Int 2022; 29:60641-60661. [PMID: 35426552 PMCID: PMC9010243 DOI: 10.1007/s11356-022-20058-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 03/29/2022] [Indexed: 05/11/2023]
Abstract
The tourism plays a significant role in economics and development of any country through revenue generation from multiple sources. Spain has been tourist place and host million foreign tourist. The tourism is highly depended on climate and thermal comfortness of the visiting place. This present research aimed to analyze the outdoor thermal comfort conditions in microclimates of the urban ancient plazas of the two important cities of Spain, namely Sevilla and Madrid on a hot humid stress day of the year. The microclimatic measurement, questionnaire survey, and simulation results were examined to evaluate the thermal comfort condition of six different urban plazas in Sevilla and Madrid to distinguish the supreme time to visit each ancient site. The results have suggested that the outdoor thermal comfort range for the tourist in the historical plazas of Sevilla and Madrid varies from 28.42 to 30.87 °C and 24.5 to 29.82 °C in the hot summer. Despite the high heat stress condition, the result of questionnaires survey shows that about 38.11% and 28.09% of tourists in Sevilla and Madrid, respectively, were satisfied with the thermal conditions. As witnessed from the result of the Envi-met simulation, Plaza de Santa Ana of Madrid and Plaza Nueva of Sevilla is the best place for visitors in the early morning hours. Additionally, during the peak hours, the thermal comfort of Alameda de Hercules of Sevilla and Plaza de Santa Ana of Madrid is the most suitable historical places for visitors, whereas in the evening hours, Plaza Nueva of Sevilla and Plaza de Mayor of Madrid with wider semi-open spaces and relatively suitable vegetation bring more favorable conditions for visitors. The comparison of the simulation result with the questionnaire reveals that the urban plazas with relatively high thermal stresses have a higher rate of thermal dissatisfaction.
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Affiliation(s)
- Alireza Karimi
- Instituto Universitario de Arquitectura Y Ciencias de La Construcción, Escuela Técnica Superior de Arquitectura, Universidad de Sevilla, 41012 Sevilla, Spain
| | - Pir Mohammad
- Department of Earth Sciences, Indian Institute of Technology, Roorkee, Uttarakhand 247667 India
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Narimani N, Karimi A, Brown RD. Effects of street orientation and tree species thermal comfort within urban canyons in a hot, dry climate. ECOL INFORM 2022. [DOI: 10.1016/j.ecoinf.2022.101671] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Karimi A, Rahmati SM, Razaghi R, Crawford Downs J, Acott TS, Wang RK, Johnstone M. Biomechanics of human trabecular meshwork in healthy and glaucoma eyes via dynamic Schlemm's canal pressurization. Comput Methods Programs Biomed 2022; 221:106921. [PMID: 35660943 PMCID: PMC10424782 DOI: 10.1016/j.cmpb.2022.106921] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 05/17/2022] [Accepted: 05/26/2022] [Indexed: 05/27/2023]
Abstract
BACKGROUND AND OBJECTIVE The trabecular meshwork (TM) consists of extracellular matrix (ECM) with embedded collagen and elastin fibers providing its mechanical support. TM stiffness is considerably higher in glaucoma eyes. Emerging data indicates that the TM moves dynamically with transient intraocular pressure (IOP) fluctuations, implying the viscoelastic mechanical behavior of the TM. However, little is known about TM viscoelastic behavior. We calculated the viscoelastic mechanical properties of the TM in n = 2 healthy and n = 2 glaucoma eyes. METHODS A quadrant of the anterior segment was submerged in a saline bath, and a cannula connected to an adjustable saline reservoir was inserted into Schlemm's canal (SC). A spectral domain-OCT (SD-OCT) provided continuous cross-sectional B-scans of the TM/JCT/SC complex during pressure oscillation from 0 to 30 mmHg at two locations. The TM/JCT/SC complex boundaries were delineated to construct a 20-µm-thick volume finite element (FE) mesh. Pre-tensioned collagen and elastin fibrils were embedded in the model using a mesh-free penalty-based cable-in-solid algorithm. SC pressure was represented by a position- and time-dependent pressure boundary; floating boundary conditions were applied to the other cut edges of the model. An FE-optimization algorithm was used to adjust the ECM/fiber mechanical properties such that the TM/JCT/SC model and SD-OCT imaging data best matched over time. RESULTS Significantly larger short- and long-time ECM shear moduli (p = 0.0032), and collagen (1.82x) and elastin (2.72x) fibril elastic moduli (p = 0.0001), were found in the TM of glaucoma eyes compared to healthy controls. CONCLUSIONS These findings provide additional clarity on the mechanical property differences in healthy and glaucomatous outflow pathway under dynamic loading. Understanding the viscoelastic properties of the TM may serve as a new biomarker in early diagnosis of glaucoma.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA.
| | | | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA
| | - J Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA.
| | - Ted S Acott
- Ophthalmology and Biochemistry and Molecular Biology, Casey Eye Institute, Oregon Health & Science University, Portland, Oregon, USA.
| | - Ruikang K Wang
- Department of Ophthalmology, University of Washington, Seattle, WA, USA; Department of Bioengineering, University of Washington, Seattle, WA, USA.
| | - Murray Johnstone
- Department of Ophthalmology, University of Washington, Seattle, WA, USA.
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Karimi A, Razaghi R, Rahmati SM, Downs JC, Acott TS, Wang RK, Johnstone M. Modeling the biomechanics of the conventional aqueous outflow pathway microstructure in the human eye. Comput Methods Programs Biomed 2022; 221:106922. [PMID: 35660940 PMCID: PMC10424784 DOI: 10.1016/j.cmpb.2022.106922] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 05/16/2022] [Accepted: 05/26/2022] [Indexed: 05/27/2023]
Abstract
BACKGROUND AND OBJECTIVE Intraocular pressure (IOP) is determined by aqueous humor outflow resistance, which is a function of the combined resistance of Schlemm's canal (SC) endothelium and the trabecular meshwork (TM) and their interactions in the juxtacanalicular connective tissue (JCT) region. Aqueous outflow in the conventional outflow pathway results in pressure gradient across the TM, JCT, and SC inner wall, and induces mechanical stresses and strains that influence the geometry and homeostasis of the outflow system. The outflow resistance is affected by alteration in tissues' geometry, so there is potential for active, two-way, fluid-structure interaction (FSI) coupling between the aqueous humor (fluid) and the TM, JCT, and SC inner wall (structure). However, our understanding of the biomechanical interactions of the aqueous humor with the outflow connective tissues and its contribution to the outflow resistance regulation is incomplete. METHODS In this study, a microstructural finite element (FE) model of a human eye TM, JCT, and SC inner wall was constructed from a segmented, high-resolution histologic 3D reconstruction of the human outflow system. Three different elastic moduli (0.004, 0.128, and 51.5 MPa based on prior reports) were assigned to the TM/JCT complex while the elastic modulus of the SC inner wall was kept constant at 0.00748 MPa. The hydraulic conductivity was programmed separately for the TM, JCT, and SC inner wall using a custom subroutine. Cable elements were embedded into the TM and JCT extracellular matrix to represent the directional stiffness imparted by anisotropic collagen fibril orientation. The resultant stresses and strains in the outflow system were calculated using fluid-structure interaction method. RESULTS The higher TM/JCT stiffness resulted in larger stresses, but smaller strains in the outflow connective tissues, and resulted in a 4- and 5-fold larger pressure drop across the SC inner wall, respectively, compared to the most compliant model. Funneling through µm-sized SC endothelial pores was evident in the models at lower tissue stiffness, but aqueous flow was more turbulent in models with higher TM/JCT stiffness. CONCLUSIONS The mechanical properties of the outflow tissues play a crucial role in the hydrodynamics of the aqueous humor in the conventional outflow system.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, 1670 University Boulevard, VH 372B, Birmingham, AL 35294, USA.
| | - Reza Razaghi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, 1670 University Boulevard, VH 372B, Birmingham, AL 35294, USA
| | | | - J Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, 1670 University Boulevard, VH 372B, Birmingham, AL 35294, USA
| | - Ted S Acott
- Ophthalmology and Biochemistry and Molecular Biology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA
| | - Ruikang K Wang
- Department of Ophthalmology, University of Washington, Seattle, WA, USA; Department of Bioengineering, University of Washington, Seattle, WA, USA
| | - Murray Johnstone
- Department of Ophthalmology, University of Washington, Seattle, WA, USA
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Mehdipour A, Khosroshahian S, Pourhossein H, Mohammadbeigi A, Karimi A. Prevalence and association of temporomandibular disorders with malocclusion and anxiety in children and adolescents: a cross-sectional observational study. Gen Dent 2022; 70:65-71. [PMID: 35467547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
The aims of this study were to evaluate the prevalence of temporomandibular disorders (TMDs) in children between 6 and 12 years of age in the city of Qom, Iran, and explore the associations between TMDs and both malocclusion and anxiety. This study was conducted in 193 children who were assessed via interview, clinical examination, and the parent version of the Spence Children's Anxiety Scale. Clinical examinations consisted of assessment of asymmetry, joint sounds, jaw movements (functional shift, temporomandibular joint pain on opening, limitations on mouth opening, and mandibular deviation from midline on mouth opening), and masticatory muscles (sensitivity of masseter and temporalis muscles on palpation and dysfunction of pterygoid muscles). The presence of malocclusion and parafunctional habits were also evaluated. The data were analyzed using chi-square and independent t tests. The associations between anxiety and the quantitative variables of the study were analyzed with the Pearson correlation coefficient. The total prevalence of TMDs in this sample was 17.1%. Most children with TMDs had a moderate anxiety level, and the anxiety score had a significant correlation with the presence of TMDs (P = 0.000). There was a significant relationship between Class II malocclusion and TMDs as well as between Class III malocclusion and TMDs. The most common oral habit was placing a pencil or other objects between the teeth. No significant relationships were observed between the prevalence of TMDs and the sex and age groups. This study showed significant relationships between TMDs and anxiety, malocclusion, and parafunctional habits.
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22
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Karimi A, Rahmati SM, Razaghi R, Girkin CA, Crawford Downs J. Finite element modeling of the complex anisotropic mechanical behavior of the human sclera and pia mater. Comput Methods Programs Biomed 2022; 215:106618. [PMID: 35026624 PMCID: PMC8847341 DOI: 10.1016/j.cmpb.2022.106618] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 12/31/2021] [Accepted: 01/01/2022] [Indexed: 06/14/2023]
Abstract
BACKGROUND AND OBJECTIVE Accurate finite element (FE) simulation of the optic nerve head (ONH) depends on accurate mechanical properties of the load-bearing tissues. The peripapillary sclera in the ONH exhibits a depth-dependent, anisotropic, heterogeneous collagen fiber distribution. This study proposes a novel cable-in-solid modeling approach that mimics heterogeneous anisotropic collagen fiber distribution, validates the approach against published experimental biaxial tensile tests of scleral patches, and demonstrates its effectiveness in a complex model of the posterior human eye and ONH. METHODS A computational pipeline was developed that defines control points in the sclera and pia mater, distributes the depth-dependent circumferential, radial, and isotropic cable elements in the sclera and pia in a pattern that mimics collagen fiber orientation, and couples the cable elements and solid matrix using a mesh-free penalty-based cable-in-solid algorithm. A parameter study was performed on a model of a human scleral patch subjected to biaxial deformation, and computational results were matched to published experimental data. The new approach was incorporated into a previously published eye-specific model to test the method; results were then interpreted in relation to the collagen fibers' (cable elements) role in the resultant ONH deformations, stresses, and strains. RESULTS Results show that the cable-in-solid approach can mimic the full range of scleral mechanical behavior measured experimentally. Disregarding the collagen fibers/cable elements in the posterior eye model resulted in ∼20-60% greater tensile and shear stresses and strains, and ∼30% larger posterior deformations in the lamina cribrosa and peripapillary sclera. CONCLUSIONS The cable-in-solid approach can easily be implemented into commercial FE packages to simulate the heterogeneous and anisotropic mechanical properties of collagenous biological tissues.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA.
| | | | - Reza Razaghi
- Research Department, Heel of Scene Ltd., Tokyo, Japan
| | - Christopher A Girkin
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA.
| | - J Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA.
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23
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Kamrani N, Karimi A, Nazari M, Masoudi R. Modulation of Negative Effects of Physiological Stress on Frozen-Thawed Semen with Nutrition of Organic Selenium in Ross 308 Rooster. Arch Razi Inst 2021; 76:1787-1795. [PMID: 35546988 PMCID: PMC9083867 DOI: 10.22092/ari.2021.355960.1765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 10/02/2021] [Indexed: 06/15/2023]
Abstract
Current experiment was carried out in factorial 2×2 arrangement to study the effects of stress (with or without dexamethasone administration) and addition of dietary selenium (with or without selenium supplementation in the diet) in male broiler breeder on the quality of frozen-thawed sperm under oxidative stress induced by dexamethasone. A total of 24 broiler breeder roosters with the age of 28 weeks were used based on a completely randomized design with four therapeutic approaches (factorial 2×2) and six birds in each approach. The experimental treatments were: 1) basal diet without selenium supplementation and injection of saline (CON), 2) basal diet with dexamethasone injection (4 mg/kg BW, three times every other day for one week), (DEX), 3) without dexamethasone injection and supplementation with 0.3 mg/kg selenium (Sel-Plex), and 4) dexamethasone injection and basal diet supplemented with 0.3 mg/kg of diet selenium (Sel-Plex+Dex). Sperm samples were collected from roosters. Motility, progressive motility, plasma membrane integrity, viability, malondialdehyde concentration and antioxidant parameters were evaluated in fresh and frozen-thawed semen. In spite of non-significant interaction effects, factorial analysis indicated the significant effect of every factor on different experimental parameters in fresh and frozen-thawed semen (P<0.05); The results revealed that total and progressive motility, plasma membrane integrity and viability were lower in DEX group when compared with other treatments (P<0.05). On the other hand, malondialdehyde concentration was higher in DEX group in comparison with Con, Sel-Plex and Sel-Plex+DEX groups (P<0.05). Moreover, total antioxidant capacity, level of glutathione peroxidase and superoxide dismutase were lower in DEX group as compared with other treatments (P<0.05). Our findings indicated that administration of selenium in dexamethasone-receiving roosters (Sel-Plex+DEX) improved the parameters of fresh and frozen-thawed sperm; but the best results were observed in Sel-Plex treatment. Therefore, selenium supplementation in the diet of roosters without dexamethasone injection improved total motility, progressive motility, membrane integrity, viability, malondialdehyde, total antioxidant capacity, glutathione peroxidase and superoxide dismutase pre- and post-freezing. It can be concluded, selenium in organic forms in stressed and non-stressed rooster's diet might improve all motility and antioxidant parameters in fresh and frozen-thawed sperm.
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Affiliation(s)
- N Kamrani
- Department of Animal Science, Faculty of Ahar Agriculture & Natural Resources, University of Tabriz, Tabriz, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Ahar Agriculture & Natural Resources, University of Tabriz, Tabriz, Iran
| | - M Nazari
- Department of Animal Science, Faculty of Agriculture, University of Tabriz, Tabriz, Iran
| | - R Masoudi
- Animal Science Research Institute of Iran (ASRI), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
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Abdolkarimzadeh F, Ashory MR, Ghasemi-Ghalebahman A, Karimi A. Inverse dynamic finite element-optimization modeling of the brain tumor mass-effect using a variable pressure boundary. Comput Methods Programs Biomed 2021; 212:106476. [PMID: 34715517 DOI: 10.1016/j.cmpb.2021.106476] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Accepted: 10/12/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND AND OBJECTIVE Statistical atlases of brain structure can potentially contribute in the surgical and radiotherapeutic treatment planning for the brain tumor patients. However, the current brain image-registration methods lack of accuracy when it comes to the mass-effect caused by tumor growth. Numerical simulations, such as finite element method (FEM), allow us to calculate the resultant pressure and deformation in the brain tissue due to tumor growth, and to predict the mass-effect. To date, however, the pressure boundary in the brain tissue due to tumor growth has been simply presented as a constant profile throughout the entire tumor outer surface that resulted in discrepancy between the patient imaging data and brain atlases. METHODS In this study, we employed a fully-coupled inverse dynamic FE-optimization method to estimate the resultant variable pressure boundary due to tumor resection surgery. To do that, magnetic resonance imaging data of two patients' pre- and post-tumor resection surgery were registered, segmented, volume-meshed, and prepared for fully-coupled inverse dynamic FE-optimization simulations. Two different pressure boundaries were defined on the brain cavity after tumor resection including: a) a constant pressure boundary and b) a variable pressure boundary. The inverse FE-optimization algorithm was used to find the optimum constant and variable pressure boundaries that result in the least distance between the surface-nodes of the post-surgery brain cavity and pre-surgery tumor. RESULTS The results revealed that a variable pressure boundary causes a considerably lower mean percentage error compared to a constant pressure one; hence, it can more effectively address the realistic boundary in tumor resection surgery and predict the mass-effect. CONCLUSIONS The proposed variable pressure boundary can be a robust tool that allows batch processing to register the brains with tumors to statistical atlases of normal brains and construction of brain tumor atlases. This approach is also computationally inexpensive and can be coupled to any FE software to run. The findings of this study have implications for not only predicting the accurate pressure boundary and mass-effect before tumor resection surgery, but also for predicting some clinical symptoms of brain cancers and presenting useful tools for APPLICATIONs in image-guided neurosurgery.
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Affiliation(s)
| | | | | | - Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States.
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25
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Karimi A, Razaghi R, Girkin CA, Downs JC. Ocular biomechanics due to ground blast reinforcement. Comput Methods Programs Biomed 2021; 211:106425. [PMID: 34598082 PMCID: PMC8577623 DOI: 10.1016/j.cmpb.2021.106425] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Accepted: 09/14/2021] [Indexed: 05/24/2023]
Abstract
BACKGROUND AND OBJECTIVE Bomb blast injuries exerts a shearing force on the air-tissue interfaces, causing devastating ocular injury from the blast wave. Improvised explosive devices (IEDs) are usually placed at different heights from the ground to induce more severe injury through ground blast reinforcement (GBR). However, there is still a lack of knowledge of the role of GBR and IED height from the ground on ocular biomechanics, and how they can affect the intraocular pressure (IOP) in the eye. This study aimed to estimate the IOP due to frontal IED explosion at different heights from the ground using a fluid-structure interaction model with and without GBR effects. METHODS A 2 kg IED was placed within 5 m of the victim at 5 different heights from the ground, including 0, 0.42, 0.85, 1.27, and 1.70 m. Two different blast formulations were used to simulate the IED explosion: (a) spherical airburst, with no amplification of the initial shock wave due to interaction with the ground-surface, and (b) hemispherical surface-burst, where the initial blast wave is immediately reflected and reinforced by the ground (GBR). RESULTS Results revealed that the blast wave due to GBR reaches to the skull prior to the IED blast itself. The GBR also reached to the skull ∼ 0.6 ms earlier when the IED was on the ground compared to the height of 1.70 m. The highest and lowest IOPs of ∼ 17,000 and ∼ 15,000 mmHg were observed at the IED heights of 1.70 and 0 m from the ground considering GBR. However, when the role of the GBR is ignored, IOP of ∼ 9,000 mmHg was observed regardless of the IED height from the ground. The deformation in the apex of the cornea was higher when considering the GBR (∼ 0.75 cm) versus no GBR (∼ 0.65 cm). Considering GBR led to higher stresses and strains in the sclera. CONCLUSIONS When the role of GBR was ignored, the results showed similar patterns and magnitudes of stresses and deformations in the skull and eye regardless of the height of the IED from the ground, which was not the case when GBR was considered. The findings of this study suggest the critical role of GBR in ocular blast simulations.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, 1670 University Boulevard, VH 390A, Birmingham, AL 35294, United States.
| | - Reza Razaghi
- Research Department, Heel of Scene Ltd., 2 Chome-12-3 Honmachi, Shibuya City, Tokyo, Japan.
| | - Christopher A Girkin
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, 1670 University Boulevard, VH 390A, Birmingham, AL 35294, United States.
| | - J Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, 1670 University Boulevard, VH 390A, Birmingham, AL 35294, United States.
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26
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Karimi A, Rahmati SM, Grytz RG, Girkin CA, Downs JC. Modeling the biomechanics of the lamina cribrosa microstructure in the human eye. Acta Biomater 2021; 134:357-378. [PMID: 34245889 DOI: 10.1016/j.actbio.2021.07.010] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 06/25/2021] [Accepted: 07/02/2021] [Indexed: 12/13/2022]
Abstract
Glaucoma is among the leading causes of blindness worldwide that is characterized by irreversible damage to the retinal ganglion cell axons in the lamina cribrosa (LC) region of the optic nerve head (ONH), most often associated with elevated intraocular pressure (IOP). The LC is a porous, connective tissue structure that provides mechanical support to the axons as they exit the eye and the biomechanics of the LC microstructure likely play a crucial role in protecting the axons passing through it. There is a limited knowledge of the IOP-driven biomechanics of the LC microstructure, primarily due to its small size and the difficulty with imaging the LC both in vitro and in vivo. We present finite element (FE) models of three human eye posterior poles that include the LC microstructure and interspersed neural tissues (NT) composed of retinal axons that are constructed directly from segmented, binary images of the LC. These models were used to estimate the stresses and strains in the LC and NT for an acute IOP elevation from 0 to 45 mmHg and compared with identical models except that the LC was represented as a homogenized continuum material with either homogeneous isotropic neo-Hookean properties or heterogeneous properties derived from local connective tissue volume fraction (CTVF) and predominant LC beam orientation. Stresses and strains in the LC and NT microstructure were investigated, and results were compared against those from the models wherein the LC was represented as a homogenized continuum. The regionalized volumetric average stresses and strains showed that the microstructural model yielded similar patterns to our prior approach using an LC continuum representation with mapped LC CTVF/anisotropy, but the microstructural modeling approach allows analysis of the stresses and strains in the LC and NT separately. As expected, the LC beams carried most of the IOP load in the microstructural models but exhibited less strain, while the encapsulated NT exhibited lower stresses and much higher strains. Results also revealed that the continuum models underestimate the maximum strains in the LC beams and NT by a factor of 2-3. Microstructural modeling should provide greater insight into the biomechanical factors driving damage to the axons (NT) and LC connective tissue remodeling that occur in glaucoma. The methods presented are ideal for modeling any structure with a complex microstructure composed of different materials, such as trabecular bone, lung, and tissue engineering scaffolds such as decellularized LC. Matlab code for mesh generation from a segmented image stack of the microstructure is included as Supplemental Material. STATEMENT OF SIGNIFICANCE: Glaucoma is among the leading causes of blindness worldwide that is characterized by axon damage in the lamina cribrosa (LC) region of the eye. We present a new approach for finite element modeling the entire eye-specific 3D LC microstructure and the interspersed neural tissues, incorporated into an eye-specific posterior eye model that provides appropriate boundary and loading conditions. Results are presented for three human donor eyes, showing that prior modeling approaches underestimate the stresses and strains in the laminar microstructure. We constructed models from image stacks of the segmented microstructure (Matlab code included) using an approach that is ideal for modeling any structure with a complex microstructure composed of different materials, such as trabecular bone, lung, and tissue engineering scaffolds.
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Salari MH, Karimi A. Prevalence of Ureaplasma urealyticum and Mycoplasma genitalium in men with non-gonococcal urethritis. East Mediterr Health J 2021. [DOI: 10.26719/2003.9.3.291] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The study in Teheran, Islamic Republic of Iran, investigated the prevalence of Ureaplasma urealyticum and Mycoplasma species in men with non-gonococcal urethritis. Urethral swab samples were collected from 125 cases and 125 healthy men as a control group. The samples were then investigated by culture methods. The rates of detected bacteria in case and control groups were 19.2% and 7.2% for U. urealyticum, 7.2% and 0.8% for M. genitalium, and 2.4% and 1.6% for M. hominis respectively. Statistical analysis showed a significant difference between case and control groups in the prevalence of U. urealyticum and M. genitalium but not M. hominis. It is concluded that in men, U. urealyticum and M. genitalium may have an etiologic role in non-gonococcal urethritis
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28
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Tabatabaei-Panah PS, Moravvej H, Alirajab M, Arghand F, Babaei H, Didehvar E, Hajmanouchehri S, Hosseine F, Karimi A, Mahdian M, Parvizi Moridani S, Sakhaie F, Ludwig RJ, Akbarzadeh R. COL17A1 gene polymorphisms are frequent in bullous pemphigoid. J Eur Acad Dermatol Venereol 2021; 35:e535-e538. [PMID: 33871111 DOI: 10.1111/jdv.17285] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
| | - H Moravvej
- Skin Research Centre, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - M Alirajab
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - F Arghand
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - H Babaei
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - E Didehvar
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - S Hajmanouchehri
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - F Hosseine
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - A Karimi
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - M Mahdian
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - S Parvizi Moridani
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - F Sakhaie
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - R J Ludwig
- Lübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, Germany
| | - R Akbarzadeh
- Skin Research Centre, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- Lübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, Germany
- Institute of Anatomy, University of Lübeck, Lübeck, Germany
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Biglari Quchan Atigh Z, Heidari A, Karimi A, Pezhman MA, Asgari Lajayer B, Lima EC. Purification and economic analysis of nanoclay from bentonite. Environ Sci Pollut Res Int 2021; 28:13690-13696. [PMID: 33190207 DOI: 10.1007/s11356-020-11595-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2020] [Accepted: 11/09/2020] [Indexed: 06/11/2023]
Abstract
Nowadays, due to the most application of montmorillonite, its purification from raw bentonite has great importance. More than 76% of bentonite is composed of montmorillonite, and its industrial applications are related to its montmorillonite content. In this study, the nanoclay was extracted from bentonite by the use of centrifugal force. The results of the field-emission scanning electron microscopy (FE-SEM) analysis show that the nanosized of purified montmorillonite has a sheet structure with a spacing of 22.41 nm and 45.0 nm. The sharp peaks in X-ray diffraction analysis (XRD) illustrated that the montmorillonite purified successfully, and the results of Fourier-transform infrared spectrophotometry (FT-IR) revealed the successful incorporation of the metabolic extraction within the montmorillonite. By comparison of Brunauer-Emmett-Teller (BET) results with IUPAC, it can be realized that the synthesized montmorillonite nanoclay has a microporous structure (< 2 nm) with a surface area of 11.325 m2 g-1. According to IUPAC classification, the BET isotherms of montmorillonite and bentonite indicate a hysteresis loop belonging to the type H3. Finally, the economic analysis results revealed to this method could be the best option for achieving high purity montmorillonite for future applications.
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Affiliation(s)
- Zahra Biglari Quchan Atigh
- Department of Environmental Science, Faculty of Natural Resource and Environment, Ferdowsi University of Mashhad, Mashhad, Iran.
| | - Ava Heidari
- Department of Environmental Science, Faculty of Natural Resource and Environment, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Alireza Karimi
- Department of Soil Science, Faculty of Agriculture, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Mohammad Ali Pezhman
- Department of Chemical Engineering, Faculty of Engineering, Ferdowsi University of Mashhad, Mashhad, Iran
| | - Behnam Asgari Lajayer
- Health and Environment Research Center, Tabriz University of Medical Sciences, Tabriz, Iran.
| | - Eder Claudio Lima
- Institute of Chemistry, Federal University of Rio Grande do Sul, Porto Alegre, RS, Brazil
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Karimi A, Alijoo YA, Kazemi-Bonchenari M, Mirzaei M, Sadri H. Effects of supplemental fat sources and forage feeding levels on growth performance, nutrient digestibility, ruminal fermentation, and nitrogen utilization in dairy calves. Animal 2021; 15:100179. [PMID: 33589349 DOI: 10.1016/j.animal.2021.100179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 01/10/2021] [Accepted: 01/11/2021] [Indexed: 11/16/2022] Open
Abstract
Knowledge regarding the potential interactions between supplemental fat source and fiber level in starter diet of dairy calves is lacking. The aim of the present study was to investigate the effects of supplemental saturated fat [palm fat (PLF) containing 86% palmitic acid (C16:0)] vs. unsaturated fat [soybean oil (SBO) containing 51% linoleic acid (C18:2)] and forage level on feed intake, growth performance, ruminal fermentation, nutrient digestibility, and metabolic traits in dairy calves. Forty newborn Holstein female calves (BW = 39.7 ± 1.8 kg) were assigned to 1 of 4 treatment groups (each consisting of 10 animals) in a 2 × 2 factorial arrangement of fat source [soybean oil vs. palm fat; 3% of starter based on DM basis] and alfalfa hay level (0 vs. 15%, on DM basis): SBO or PLF with (AH) or without (NAH) alfalfa hay. Calves had ad libitum access to water and starters throughout the study and a constant amount of milk was offered among experimental calves during the pre-weaning period. All calves were weaned on day 63 of age and remained in the study until day 73 of age. The results showed that the lowest and the highest starter intake and average daily gain during pre-weaning period was observed when calves received SBO-AH and PLF-AH, respectively. Accordingly, the lowest wither and hip heights at weaning time (day 63) and final wither height (day 73) were observed in SBO-AH group across treatments. Calves received PLF-AH had the highest weaning and final BW compared to other groups. Feed efficiency tended to be higher in PLF groups compared with SBO calves. Calves fed SBO-AH had the lowest digestibility of organic matter and neutral detergent fiber and also total short chain fatty acid concentrations in rumen compared with other groups. The SBO calves had lower urinary allantoin, urinary purine derivatives, and microbial protein synthesis than PLF calves; however, urinary nitrogen increased with SBO supplementation. In summary, the supplementation of SBO rich in C18:2 and AH during the pre-weaning period resulted in negative responses on growth performance, digestibility, and ruminal fermentation profile. Therefore, the inclusion SBO rich in C18:2 along with forage in the starter is not recommendable for young dairy calves.
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Affiliation(s)
- A Karimi
- Department of Animal Science, Faculty of Agriculture, Urmia University, 5756151818 Urmia, Iran
| | - Y A Alijoo
- Department of Animal Science, Faculty of Agriculture, Urmia University, 5756151818 Urmia, Iran.
| | - M Kazemi-Bonchenari
- Department of Animal Science, Faculty of Agriculture and Natural Resources, Arak University, 38156-8-8349 Arak, Iran
| | - M Mirzaei
- Department of Animal Science, Faculty of Agriculture and Natural Resources, Arak University, 38156-8-8349 Arak, Iran
| | - H Sadri
- Department of Clinical Science, Faculty of Veterinary Medicine, University of Tabriz, 516616471 Tabriz, Iran; Institute of Animal Science, Physiology and Hygiene Unit, University of Bonn, 53115 Bonn, Germany
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Mosavari N, Karimi A, Tadayon K, Shahhosseini G, Zavaran Hosseini A, Babaie M. Evaluation of Heating and Irradiation Methods for Production of Purified Protein Derivative (PPD) of Mycobacterium Tuberculosis. Arch Razi Inst 2021; 75:439-449. [PMID: 33403839 DOI: 10.22092/ari.2019.123082.1238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Accepted: 12/10/2019] [Indexed: 09/30/2022]
Abstract
Tuberculin skin test, also known as the tuberculin or purified protein derivative (PPD) test, is an extensively applied diagnostic test for the detection of primary infection with Mycobacterium tuberculosis (Mtb). The production of PPD is accompanied by some difficulties that require a series of modifications in the production and purification processes. The present study aimed to determine the facilitation level of the manufacturing process by modifying evaluation methods for the production of PPD tuberculin. Mtb strains were cultured in Lowenstein-Jensen media, and the cultured strains were inoculated into the Dorset-Henley liquid medium by the biphasic medium of potato-Dorset-Henley. After incubation, flasks containing cultured strain were selected for bacterial inactivation, and the optimal gamma radiation dose(s) was determined. Tuberculoproteins were precipitated by ammonium sulfate (AS) and Trichloroacetic acid (TCA). Protein concentration was determined using the Bradford and Kjeldahl protein assay methods. Finally, the lymphocyte transformation test and potency test were performed. Based on the results, the Dorset-Henley liquid medium is suitable for the massive growth of the bacterium. The transferal of Mtb from solid to liquid medium was directly carried out without intermediate culture. It was found that during tuberculoprotein production, heating at 100&deg;C for 3 h would be safe for killing mycobacterium. Furthermore, the simultaneous use of heating and gamma irradiation (8 kGgy) killed all of the mycobacteria, while doses of 1, 1.5, and 7 kGy decreased a significant number of bacterial cells. The results also indicated that the concentration of tuberculoprotein extracted by TCA precipitation method was higher than that obtained by AS precipitation. The tuberculoproteins which were produced by these two methods in the lymphocyte transformation test were not significantly different in terms of potency (P&gt;0.05). Moreover, due to the high volume of produced protein, the protein measurement was more efficiently carried out by the Kjeldahl method, compared to the Bradford method. Finally, the results of the present study demonstrated that in addition to the novel approach of gamma irradiation, optimum methods are efficient and applicable in the production of PPD tuberculin.
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Affiliation(s)
- N Mosavari
- . Reference Laboratory of Bovine Tuberculosis, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - A Karimi
- Department of Molecular Medicine, Faculty of Advanced Medical Sciences, Tabriz University of Medical Sciences, Tabriz, Iran
| | - K Tadayon
- . Reference Laboratory of Bovine Tuberculosis, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Gh Shahhosseini
- Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute, Karaj, Iran.,Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute, Karaj, Iran
| | | | - M Babaie
- . Reference Laboratory of Bovine Tuberculosis, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
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Beirami S, Nikkhoo M, Hassani K, Karimi A. A comparative finite element simulation of locking compression plate materials for tibial fracture treatment. Comput Methods Biomech Biomed Engin 2021; 24:1064-1072. [PMID: 33393809 DOI: 10.1080/10255842.2020.1867114] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
The locking compression plate (LCP) system has several advantages in fracture fixation combining angular stability with the use of locking screws with traditional fixation techniques. However, the system is complex and requiring careful attention to biomechanical principles and good surgical technique. Due to the set of complicate stresses and strains in the LCP system after implantation, the material, which is being used here, is deemed important. However, so far the materials have been limited to the stainless steel (SS) or titanium (Ti). This study was therefore aimed at investigate the biomechanical performance of the internal tibial locked plates at different material properties, including SS, Ti, carbon/polyether ether ketone (PEEK) composite, in treating medial tibial fracture using patient-specific finite element (FE) model of the human tibia. The carbon/PEEK composite materials were used at three different fiber plies configurations. Simulated loading was applied at 60:40 ratios on the medial:lateral aspect. The model was fixed distally in all degrees of freedom. The results revealed the highest stress (307.10 MPa) and the lowest strain (0.14%) at Ti LCP system. The carbon/PEEK LCP system at configuration I and III showed low stress (∼60 MPa) and high strain (0.70%), which are suitable points for designing of an internal LCP system. On the other hand, the highest value of stress in callus region was 4.78 MPa (Carbon PEEK/Configuration I) and the strain variations of callus region were between 1.46% and 3.82% among all materials. These results implied the advantage of carbon/PEEK composite materials in LCP system as they can tolerate higher strains at lower stresses.
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Affiliation(s)
- Sami Beirami
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Mohammad Nikkhoo
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Kamran Hassani
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, USA
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Safari M, Shojaei S, Tehrani P, Karimi A. A patient-specific finite element analysis of the anterior cruciate ligament under different flexion angles. J Back Musculoskelet Rehabil 2021; 33:811-815. [PMID: 31815688 DOI: 10.3233/bmr-191505] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
BACKGROUND The main responsibility of the anterior cruciate ligament (ACL) is to restore normal knee kinematics and kinetics. Although so far different research has been carried out to measure or quantify the stresses and strains in the ACL experimentally or numerically, there is still a paucity of knowledge in this regard under different flexion angles of the tibiofemoral knee joint. OBJECTIVE Understanding the stresses and strains within the ACL under various loading and boundary conditions may have a key asset for the development of an optimal surgical treatment of ACL injury that can better restore normal knee function. This study aimed to calculate the stresses and strains within the ACL under different flexion angles using a patient-specific finite element (FE) model of the human tibiofemoral knee joint. METHODS A patient-specific FE model of the human tibiofemoral knee joint was established using computed tomography/magnetic resonance imaging data to calculate the stresses and strains in the ACL under different flexion angles of 0, 10, 20, 30, and 45∘. RESULTS Although the role of the flexion angle in the induced stresses and strains of the ACL was insignificant, the highest stress and strain were observed at the flexion angle of 0∘. The concentration of the stresses and strains regardless of the flexion angles were also located at the proximal end of the ACL, where the clinical reports indicated that most ACL tearing occurs there at the femoral insertion site. CONCLUSIONS The results have implications not only for understanding the stresses and strains within the ACL under different flexion angles, but also for providing preliminary data for the biomechanical and medical experts in regard of the injuries which may occur to the ACL at relatively higher flexion angles.
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Affiliation(s)
- Maedeh Safari
- Department of Biomedical Engineering, Islamic Azad University, Central Tehran Branch, Tehran, Iran
| | - Shahrokh Shojaei
- Department of Biomedical Engineering, Islamic Azad University, Central Tehran Branch, Tehran, Iran
| | - Pedram Tehrani
- Department of Mechanical Engineering, Islamic Azad University, Central Tehran Branch, Tehran, Iran
| | - Alireza Karimi
- Department of Mechanical Engineering, Kyushu University, Nishi-ku, Fukuoka, Japan
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Karimi A, Grytz R, Rahmati SM, Girkin CA, Downs JC. Analysis of the effects of finite element type within a 3D biomechanical model of a human optic nerve head and posterior pole. Comput Methods Programs Biomed 2021; 198:105794. [PMID: 33099262 PMCID: PMC7722137 DOI: 10.1016/j.cmpb.2020.105794] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 10/05/2020] [Indexed: 05/24/2023]
Abstract
BACKGROUND AND OBJECTIVE Biomechanical stresses and strains can be simulated in the optic nerve head (ONH) using the finite element (FE) method, and various element types have been used. This study aims to investigate the effects of element type on the resulting ONH stresses and strains. METHODS A single eye-specific model was constructed using 3D delineations of anatomic surfaces in a high-resolution, fluorescent, 3D reconstruction of a human posterior eye, then meshed using our simple meshing algorithm at various densities using 4- and 10-noded tetrahedral elements, as well as 8- and 20-noded hexahedral elements. A mesh-free approach was used to assign heterogeneous, anisotropic, hyperelastic material properties to the lamina cribrosa, sclera and pia. The models were subjected to elevated IOP of 45 mmHg after pre-stressing from 0 to 10 mmHg, and solved in the open-source FE package Calculix; results were then interpreted in relation to computational time and simulation accuracy, using the quadratic hexahedral model as the reference standard. RESULTS The 10-noded tetrahedral and 20R-noded hexahedral elements exhibited similar scleral canal and laminar deformations, as well as laminar and scleral stress and strain distributions; the quadratic tetrahedral models ran significantly faster than the quadratic hexahedral models. The linear tetrahedral and hexahedral elements were stiffer compared to the quadratic element types, yielding much lower stresses and strains in the lamina cribrosa. CONCLUSIONS Prior studies have shown that 20-noded hexahedral elements yield the most accurate results in complex models. Results show that 10-noded tetrahedral elements yield very similar results to 20-noded hexahedral elements and so they can be used interchangeably, with significantly lower computational time. Linear element types did not yield acceptable results.
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Affiliation(s)
- Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States
| | - Rafael Grytz
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States
| | | | - Christopher A Girkin
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States
| | - J Crawford Downs
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States.
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Abdollahi A, Karimi A, Sadeghi AA, Bedford MR, Ashengroph M. The effects of the fiber source and xylanase supplementation on production, egg quality, digestibility, and intestinal morphology in the aged laying hen. Poult Sci 2020; 100:100936. [PMID: 33518298 PMCID: PMC7936207 DOI: 10.1016/j.psj.2020.12.033] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Revised: 12/04/2020] [Accepted: 12/15/2020] [Indexed: 12/23/2022] Open
Abstract
This study was conducted to evaluate the effects of the fiber source (wheat bran [WB] or sugar beet pulp [SBP]) and xylanase supplementation on production, egg quality, ileal digestibility, intestinal morphology, and gastrointestinal pH in aged laying hens. A total of 540 laying hens (Lohman LSL Lite; 70 wk of lay) were randomized into 10 treatments (6 replicate cages of 9 birds) consisting of a corn soy control supplemented with 0, 3, or 6% WB or SBP with or without xylanase (100 mg of xylanase preparation per kg) for a period of 9 wk in a 5 × 2 factorial arrangement. Hens fed with the diets containing either of the levels of SBP or 6% WB had lower hen-day production, and addition of the enzyme improved hen-day production (P < 0.05), but it could not compensate for the lost production due to the higher levels of either of the fiber sources. Supplementation of 6% SBP to the control diet decreased egg mass (P < 0.05). All fiber-supplemented diets significantly decreased ADFI, which was restored on enzyme addition, with the exception of 3% WB diet. Treatments had no effects on egg weight, feed conversion ratio, egg quality, and serum and carcass traits, except for ileum weight, which was greater in hens fed with the 6% SBP diet (P < 0.05). Adding 3% SBP increased ileal DM digestibility (P < 0.05). Addition of 3% WB improved jejunal villus height, villus height-to-crypt depth ratio, and villus surface area (P < 0.05). Villus surface area, DM, organic matter, and protein digestibility increased as a result of enzyme supplementation (P < 0.05). Cecal pH was reduced on feeding diets containing 3% WB, containing 3% SBP, and with enzyme supplementation (P < 0.05). In conclusion, addition of 3% WB in a corn soy control diet has the potential to improve small intestine morphology in older hens without adverse effects on performance, especially if accompanied by the use of an enzyme, which simultaneously improved morphological traits and nutrient digestibility.
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Affiliation(s)
- A Abdollahi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran.
| | - A A Sadeghi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran
| | - M R Bedford
- AB Vista, Marlborough, Wiltshire, SN8 4AN, United Kingdom
| | - M Ashengroph
- Department of Biological Science, Faculty of Science, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran
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Rahmati SM, Razaghi R, Karimi A. Biomechanics of the keratoconic cornea: Theory, segmentation, pressure distribution, and coupled FE-optimization algorithm. J Mech Behav Biomed Mater 2020; 113:104155. [PMID: 33125958 DOI: 10.1016/j.jmbbm.2020.104155] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2020] [Revised: 10/14/2020] [Accepted: 10/21/2020] [Indexed: 10/23/2022]
Abstract
Understanding of the corneal biomechanical properties is of high interest due to its potential application in the early diagnosis of keratoconus (KC). KC by itself is a non-inflammatory eye disorder causes corneal structural and/or compositional anomalies. The biomechanically weakened cornea is no longer able to preserve the normal shape of the cornea against the intraocular pressure (IOP) and gradually starts to bulge outward, invoking a conical shape and subsequent distorted vision. The most popular way to measure the in vivo corneal biomechanical properties is the CorVis-ST, which enables to analyze the dynamic response of the cornea under a temporary air puff pressure. However, the complications, such as the lack of knowledge on the accurate air-puff pressure distribution on the cornea's surface as a function of the distance from the apex of the cornea as well as the time, hinder us to have a reliable estimation of the cornea's mechanical parameters. This study aims to establish patient-specific geometries of the healthy and KC corneas and calculate the pressure distribution on the cornea's surface as a function of both the distance from the apex of the cornea and time, and thereafter, the viscoelastic mechanical properties of both the healthy and KC corneas using a coupled finite element (FE)-optimization algorithm. To do that, the dynamic deformation response of six healthy and six KC corneas were measured via CorVis-ST. The videos of the in vivo deformation of the corneas under the applied air puff pressure were segmented using our segmentation algorithm to determine the anterior and posterior curvatures of the corneas during the dynamic movement of the cornea. The FE model of the corneas were established using the segmented data and subjected to a negative (pre-stress), positive IOP, and air puff pressure while the floating boundary conditions were applied to the two ends of the corneas' FE models. The simulation results were imported into a loop of FE-optimization algorithm and analyzed until the deformation amplitude at the apex of the cornea reaches to its minimum difference compared to the clinical data by CorVis-ST. The results revealed that the pressure distributions found in the literature as a function of the distance from the apex of the cornea and time unable to provide satisfactory results. Therefore, the pressure distributions both as a function of the distance and time were optimized using our coupled FE-optimization algorithm and employed to estimate the viscoelastic properties of the healthy and KC corneas. The mean percentage error (MPE) of 8.45% and 10.79% were found for the healthy and KC corneas compared to the clinical data of CorVis-ST, respectively. The results also revealed a significantly higher short-time shear modulus for the KC (62.33 MPa) compared to the healthy (37.45 MPa) corneas while the long-time shear modulus of both the healthy and KC corneas were almost the same (4.01 vs. 3.91 MPa). The proposed algorithm is a noninvasive technique capable of accurately estimating the viscoelastic mechanical properties of the cornea, which can contribute to understand the mechanism of KC development and improve diagnosis and intervention in KC.
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Affiliation(s)
| | - Reza Razaghi
- Research Department, Heel of Scene Ltd., Tokyo, Japan; Basir Eye Health Research Center, Tehran, Iran.
| | - Alireza Karimi
- Department of Ophthalmology and Visual Sciences, University of Alabama at Birmingham, Birmingham, AL, United States.
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Derakhshan S, Aminishakib P, Karimi A, Saffar H, Abdollahi A, Mohammadpour H, Kharazi Fard MJ, Memarha A. High frequency of BRAF V600E mutation in Iranian population ameloblastomas. Med Oral Patol Oral Cir Bucal 2020; 25:e502-e507. [PMID: 32388526 PMCID: PMC7338065 DOI: 10.4317/medoral.23519] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 01/27/2020] [Indexed: 12/11/2022] Open
Abstract
Background Ameloblastoma is a common locally invasive but slow-growing neoplasm of the jaws with an odontogenic origin. Association between BRAF V600E mutation and clinicopathologic features and behavior of ameloblastoma remains controversial. This study aimed to evaluate BRAF V600E gene mutation and expression of its related proteins with clinicopathologic parameters in conventional ameloblastoma.
Material and Methods 50 Formalin-fixed paraffin-embedded blocks were included in this study. Immunohistochemistry was done using rabbit monoclonal BRAF V600E mutation-specific antibody VE1. Quantitative real-time polymerase chain reaction assay was used for evaluating of BRAF V600E mutation.
Results Expression of BRAF V600E antibody was Positive in 42 out of 50 cases (84%). 46 (92%) out of 50 specimens showed BRAF V600E mutation. There were 13 cases of recurrence (26%). 3 out of 4 cases with negative mutations did not show recurrence.
Conclusions We report the highest frequency (92%) of BRAF V600E mutation in ameloblastomas in the Iranian population. Although there was not a significant association between BRAF V600E‑positive immunoexpression and recurrence and clinicopathologic parameters, its high frequency could emphasize its role as a therapeutic marker in the future. Key words:Conventional ameloblastoma, BRAF V600E, recurrence.
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Affiliation(s)
- S Derakhshan
- North Kargar St., School of Dentistry Tehran University of Medical Sciences Tehran, Iran. Postal Code: 1439955991
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Razaghi R, Biglari H, Karimi A. A patient-specific fluid–structure interaction model of the cerebrovascular damage in relation to traumatic brain injury. Trauma 2020. [DOI: 10.1177/1460408620921729] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Background There is a lack of knowledge on the magnitudes of the biomechanical stresses and deformations occurring in the cerebral arterial wall after traumatic brain injury (TBI). Experimental techniques are unable to calculate the stresses and deformations in the cerebral arterial wall after TBI; therefore, the application of numerical simulations, such as finite element modeling, is preferred. Methods This study was aimed to calculate the stresses and deformations as well as the alteration in the pressure and velocity of the blood in the cerebrovascular artery using a fluid–structure interaction model. Results The results revealed considerable increase in the pressure and velocity of the blood which might lead to cerebrovascular damage followed by hemorrhage. The arterial wall showed the highest deformation of 0.047 mm in the X direction which was higher than that in the Y (0.035–0.050 mm) and Z (0.019–0.030 mm) directions. Conclusions These results have implications not only for the understanding of the stresses and deformations in the cerebral artery because of TBI, but also for providing a comprehensive knowledge for biomechanical and medical experts in regard to thresholds of cerebrovascular damage for use in establishing preventive and/or treatment methods.
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Affiliation(s)
- Reza Razaghi
- Department of Mechanical Engineering, University of Tabriz, Tabriz, Iran
| | - Hasan Biglari
- Department of Mechanical Engineering, University of Tabriz, Tabriz, Iran
| | - Alireza Karimi
- Department of Mechanical Engineering, Kyushu University, Fukuoka, Japan
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Karimi A, Bassani M, Boroujerdian AM, Catani L. Investigation into passing behavior at passing zones to validate and extend the use of driving simulators in two-lane roads safety analysis. Accid Anal Prev 2020; 139:105487. [PMID: 32135336 DOI: 10.1016/j.aap.2020.105487] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 02/17/2020] [Accepted: 02/19/2020] [Indexed: 06/10/2023]
Abstract
A passing maneuver allows drivers to maintain their desired speed on two-lane highways. However, it entails a high risk of collision with vehicles travelling in the opposite direction. Investigating drivers' behavior while performing passing maneuvers could provide helpful information on the factors that influence this process. Driving simulators have become important tools for driving behavior research studies as they are safe, facilitate the controlled use of experimental variables, and generate detailed output data. It remains to be seen whether simulator results can be considered representative of real-life driving conditions. With respect to passing maneuvers, no study has made a comprehensive and direct comparison between drivers' passing behavior in the field and driver behavior observed in a simulated environment. In this validation study, a fixed-base interactive simulator was used to collect data from fifty-four participants (eighteen Iranians and thirty-six Italians) involved in several traffic scenarios on a two-lane rural highway segment (obtained by varying the speed of opposing vehicles, lead vehicles and headways in the opposite direction). A 3D model and its environmental characteristics were realized from the real segment which had previously been surveyed with drones to collect videos and derive data on real passing maneuvers. The results for the two-sided K-S test revealed no statistically significant difference in the accepted gap, effective accepted gap, perception reaction time, and time to collision variables between the field and the simulator at the 95 % confidence level. However, when conducting a one-sided K-S test, some statistical directional differences were found in the cases of the accepted gap and perception reaction time variables, which exhibited lower values in the field compared to the simulator again at the 95 % confidence level. Although the passing duration was statistically higher in the simulator than in the field, the shape of the two distributions was not statistically different. Analysis showed that differences in the passing duration are due to the lower passing vehicle speed and lower speed difference with the simulator than in the field, which are caused by truncating headways in the subject direction in the simulator. The cultural background of participants did not result in any discernible difference in passing behavior. The results would support a more extensive use of driving simulators in future passing behavior studies.
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Affiliation(s)
- A Karimi
- Department of Civil and Environmental Engineering, Tarbiat Modares University, Tehran, Iran
| | - M Bassani
- Department of Environment, Land and Infrastructure Engineering, Politecnico di Torino, Torino, Italy
| | - A M Boroujerdian
- Department of Civil and Environmental Engineering, Tarbiat Modares University, Tehran, Iran.
| | - L Catani
- Department of Environment, Land and Infrastructure Engineering, Politecnico di Torino, Torino, Italy
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Morita PP, Rocha AS, Shaker G, Lee D, Wei J, Fong B, Thatte A, Karimi A, Xu L, Ma A, Wong A, Boger J. Comparative Analysis of Gait Speed Estimation Using Wideband and Narrowband Radars, Thermal Camera, and Motion Tracking Suit Technologies. J Healthc Inform Res 2020; 4:215-237. [PMID: 35415448 PMCID: PMC8982681 DOI: 10.1007/s41666-020-00071-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 01/17/2020] [Accepted: 01/27/2020] [Indexed: 01/14/2023]
Abstract
AbstractResearch has shown that cognitive and physical functioning of older adults can be reflected in indicators such as walking speed. While changes in cognition, mobility, or health cause changes in gait speed, often gradual variations in walking speed go undetected until severe problems arise. Discrete clinical assessments during clinical consultations often fail to detect changes in day-to-day walking speeds and do not reflect walking speeds in everyday environments, where most of the mobility issues happen. In this paper, we compare four walking speed measurement technologies to a GAITRite mat (gold standard): (1) an ultra wideband radar (covering the band from 3.3 GHz to 10 GHz), (2) a narrow band 24-GHz radar (with a bandwidth of 250 MHz), (3) a perception Neuron Motion Tracking suit, and (4) a thermal camera. Data were collected in parallel using all sensors at the same time for 10 healthy adults for normal and slow walking paces. A comparison of the sensors indicates better performance at lower gait speeds, with offsets (when compared to GAITRite) between 0.1 and 20% for the ultra wideband radar, 1.9 and 17% for the narrowband radar, 0.1 and 38% for the thermal camera, and 1.7 and 38% for the suit. This paper supports the potential of unobtrusive radar-based sensors and thermal camera technologies for ambient autonomous gait speed monitoring for contextual, privacy-preserving monitoring of participants in the community.
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Affiliation(s)
- P. P. Morita
- School of Public Health and Health Systems, University of Waterloo, Waterloo, ON Canada
- Centre for Global eHealth Innovation, Techna Institute, University Health Network, Toronto, ON Canada
- Institute of Health Policy, Management, and Evaluation, University of Toronto, Toronto, ON Canada
- Research Institute for Aging, Waterloo, ON Canada
| | - A. S. Rocha
- School of Public Health and Health Systems, University of Waterloo, Waterloo, ON Canada
- Goiano Federal Institute, Trindade, GO Brazil
| | - G. Shaker
- Research Institute for Aging, Waterloo, ON Canada
- Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON Canada
- Department of Mechanical and Mechatronics Engineering, University of Waterloo, Waterloo, ON Canada
- Waterloo Artificial Intelligence Institute, Waterloo, ON Canada
| | - D. Lee
- Department of Mechanical and Mechatronics Engineering, University of Waterloo, Waterloo, ON Canada
| | - J. Wei
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - B. Fong
- Department of Mechanical and Mechatronics Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Thatte
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Karimi
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - L. Xu
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Ma
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Wong
- Research Institute for Aging, Waterloo, ON Canada
- Waterloo Artificial Intelligence Institute, Waterloo, ON Canada
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - J. Boger
- Research Institute for Aging, Waterloo, ON Canada
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
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Alipour J, Mehdipour Y, Karimi A. Epidemiology and outcome analysis of 3030 burn patients with an ICD-10 approach. Ann Burns Fire Disasters 2020; 33:3-13. [PMID: 32523489 PMCID: PMC7263715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Accepted: 01/28/2020] [Indexed: 06/11/2023]
Abstract
The present study aims to document the epidemiologic features and outcomes of burn injuries in Southeastern Iran based on International Statistical Classification of Diseases and Related Health Problems, 10th Revision (ICD-10) guidelines. This retrospective cross-sectional study was carried out at Khatam-Al-Anbiya Hospital. Patient demographics, including burn injury data and outcome data were collected from medical records and analyzed through descriptive and analytical statistics using SPSS software. A total of 3,030 burn patients were included in this study. A total of 55% of the subjects were males. The largest age group included patients aged 15-44 (61%). The majority of burns were caused by flame (70.5%), and most of them were third-degree burns (73%). Mean affected total body surface area (TBSA) was 43.98%±30.75% in all subjects and 80.85%±21.41% in the deceased individuals. Most of the burns were accidental (66.2%), and 37% of them occurred in winter. Mean hospital stay was 4.49±4.67 days (within the range of 1-113 days). A quarter of all patients admitted to the hospital died (24.9%). The number of admitted patients, mean length of stay (LOS), and the mortality rate showed a decreasing trend from 2007 to 2016. In contrast, the total mortality rate was high. The significant predictors of mortality included being female, flame burns, longer LOS, a larger TBSA, burns of higher degrees, as well as burn complications. The documentation of burn data, based on ICD-10 directives, standardizes findings from burn injury analyses and leads to the comparability of data at different national and international levels.
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Affiliation(s)
- J. Alipour
- Health Promotion Research Center, Zahedan University of Medical Sciences, Zahedan, Iran
| | - Y. Mehdipour
- Health Information Technology Department, Paramedical School, Zahedan University of Medical Sciences, Zahedan, Iran
| | - A. Karimi
- Infectious Diseases and Tropical Medicine Research Center, Resistant Tuberculosis Institute, Zahedan University of Medical Sciences, Zahedan, Iran
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Fallah H, Karimi A, Sadeghi A, Behroozi-Khazaei N. Modelling and optimizing of calcium and non-phytate phosphorus requirements of male broiler chickens from 1 to 21 days of age using response surface methodology. Animal 2020; 14:1598-1609. [PMID: 32216861 DOI: 10.1017/s1751731120000452] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The skeleton is the main site of P and Ca deposition; therefore, accurate estimation of Ca and P requirements is necessary to maintaining health and optimum performance of broiler chickens. A response surface methodology (RSM) using a central composite design (CCD) was used for evaluating and optimizing of Ca and non-phytate P (NPP) requirements of broiler chickens for optimal performance, ileal nutrient digestibility and bone mineralization from 1 to 21 days of age. A total of 750 one-day-old male broiler chickens (Ross 308) were randomly distributed into 50 cages including 9 treatments, each replicated 5 times (except central treatment with 10 replicates) and 15 birds in each cage by CCD. The dietary Ca levels of 4.3, 5.6, 8.6, 11.7 and 13.0 g/kg and NPP of 2.5, 2.9, 4.0, 5.0 and 5.4 g/kg were used for nine treatments of CCD. The results indicated that the linear and quadratic effects of NPP, quadratic effects of Ca and Ca × NPP were significant for average weight gain (AWG, P < 0.05), average feed intake (AFI, P < 0.05), feed conversion ratio (FCR, P < 0.05) and Ca and P apparent ileal digestibility (AID, P < 0.05); however, the linear effect of Ca was significant only for FCR (P < 0.05). On the other hand, tibia and toe ash were affected by NPP (linear and quadratic, P < 0.01) and Ca (quadratic, P < 0.01). The second-order polynomial regression model was significant for AWG (R2 = 0.93, P < 0.001), AFI (R2 = 0.88, P < 0.001), FCR (R2 = 0.78, P < 0.001), AID of Ca (R2 = 0.78, P < 0.001) and P (R2 = 0.88, P < 0.001), tibia ash (R2 = 0.86, P < 0.001) and toe ash (R2 = 0.85, P < 0.001). The multi-objective optimization indicated that broiler chickens from 1 to 21 days of age need 7.03 and 4.47 g/kg of Ca and NPP, respectively, to achieve optimal AWG, FCR, tibia and toe ash. However, the dietary Ca and NPP levels can be reduced to 6.57 and 3.95 g/kg with a slight negative impact on performance and bone mineralization, respectively. In conclusion, the findings indicate that using multi-objective optimization model such as RSM provides more information regarding optimum Ca and NPP requirements of broiler chickens, considering the complex interaction between these two minerals. While the NPP levels are in line with current recommended requirements, Ca levels are considerably lower and suggest that current recommended Ca requirements may be in excess of the needs of the broiler.
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Affiliation(s)
- H Fallah
- Department of Animal Science, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| | - A Sadeghi
- Department of Animal Science, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| | - N Behroozi-Khazaei
- Department of Biosystems Engineering, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
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Rahmani H, Lakzian A, Karimi A, Halajnia A. Efficient removal of 2,4-dinitrophenol from synthetic wastewater and contaminated soil samples using free and immobilized laccases. J Environ Manage 2020; 256:109740. [PMID: 31989972 DOI: 10.1016/j.jenvman.2019.109740] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2019] [Revised: 10/07/2019] [Accepted: 10/19/2019] [Indexed: 06/10/2023]
Abstract
Among hazardous pollutants, 2,4-Dinitrophenol (2,4-DNP) is considered highly toxic and possesses a remarkable resistance to degradation. Therefore, investigation of the possible mechanisms for removal of such pollutants is important. Laccase enzyme can decompose phenolics despite the fact that its application has been limited due to lack of possibility to reuse it. Immobilization can overcome this problem. In this paper, laccase complexes with montmorillonite K10 and zeolite were used to decompose 2,4-DNP with concentrations of 1.5 mg l-1 and 50 mg kg-1 in synthetic wastewater and soil, respectively. The maximum removal of pollutant from wastewater in samples containing laccase-zeolite and laccase-montmorillonite complexes were 99 and 93.3%, respectively, which occurred at 4 h incubation compared with 6 h for free laccase. The maximum removal of pollutant from soil was observed for all treatments after 16 h of incubation. The maximum removal for samples containing free laccase, laccase-zeolite, and laccase-montmorillonite complexes were 98.5%, 98.6%, and 90.4%, respectively. Control sample also showed maximum removal of 35.8%. In general, application of laccase-zeolite complexes in aqueous environment, and these complexes and free laccases in soil was found very effective in degradation of 2,4-DNP. Hence, the use of laccase, especially immobilized laccases, for removal of 2,4-DNP from environment is promising.
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Affiliation(s)
- Hadiseh Rahmani
- Department of Soil Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad, Iran.
| | - Amir Lakzian
- Department of Soil Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad, Iran.
| | - Alireza Karimi
- Department of Soil Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad, Iran.
| | - Akram Halajnia
- Department of Soil Sciences, Faculty of Agriculture, Ferdowsi University of Mashhad, Iran.
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Nikkhoo M, Hassani K, Tavakoli Golpaygani A, Karimi A. Biomechanical role of posterior cruciate ligament in total knee arthroplasty: A finite element analysis. Comput Methods Programs Biomed 2020; 183:105109. [PMID: 31606558 DOI: 10.1016/j.cmpb.2019.105109] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2019] [Revised: 09/17/2019] [Accepted: 10/01/2019] [Indexed: 06/10/2023]
Abstract
BACKGROUND AND OBJECTIVE The knee joint is a complex structure which is vulnerable to injury due to various types of loadings as a consequence of walking, running, stair climbing, etc. Total knee arthroplasty (TKA) is a widely used and successful orthopedic procedure which during that the posterior cruciate ligament (PCL) can either be retained or substituted. Different surgical techniques suggest retention or sacrifice of the PCL in TKA for the treatment of osteoarthritis which may alter the post-op outcomes. The objective of this study was to evaluate the biomechanical role of PCL after TKA surgery using finite element (FE) modeling. METHODS A three-dimensional (3D) FE model of the prosthetic knee was developed and its validity was compared to available studies in literature. Further, the effect of the retention or removing of the PCL as well as its degradation (i.e. variation in mechanical properties) and angle on knee biomechanics were evaluated during a weight-bearing squatting movement. RESULTS The validity of the intact model were confirmed. The results revealed higher stresses in the PCL and tibial insert at higher femoral flexion angles. In addition, the effect of variations in the stiffness of the PCL was found to be negligible at lower while considerable at higher femoral flexion angles. The variations in the elevation angle of the PCL from 89° to 83° at the critical femoral angles of 60° and 120° showed the highest von Mises stresses in the tibial insert. CONCLUSIONS The results have implications not only for understanding the stresses in the prosthetic knee model under squat movement but also for providing comprehensive information about the effects of variations in the PCL stiffness and balancing on the induced stresses of the PCL and tibial insert.
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Affiliation(s)
- Mohammad Nikkhoo
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Kamran Hassani
- Department of Biomedical Engineering, Science and Research Branch, Islamic Azad University, Tehran, Iran.
| | | | - Alireza Karimi
- Department of Mechanical Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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Besharati S, Sadeghi A, Ahmadi F, Tajeddin E, Mohammad Salehi R, Fani F, Pouladfar G, Nikmanesh B, Majidpour A, Soleymanzadeh Moghadam S, Mirab Samiee S, Rahnamaye Farzami M, Rahbar M, Eslami P, Rakhshani N, Eshrati B, Gouya MM, Fallah F, Karimi A, Owlia P, Alebouyeh M. Serogroups, and drug resistance of nontyphoidal Salmonella in symptomatic patients with community-acquired diarrhea and chicken meat samples in Tehran. Iran J Vet Res 2020; 21:269-278. [PMID: 33584839 PMCID: PMC7871737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/25/2020] [Revised: 09/26/2020] [Accepted: 10/26/2020] [Indexed: 06/12/2023]
Abstract
BACKGROUND Salmonella is considered as a main cause of community-acquired diarrhea in humans, however, sources of the multi-drug resistant (MDR) strains and their link with the disease are not well known. AIMS This study aimed to investigate the frequency, serogroup diversity, and antimicrobial susceptibility patterns of Salmonella strains in poultry meat and stool samples of patients with community acquired diarrhea in Tehran. METHODS We compared the frequency of non-typhoidal Salmonella serogroups, the similarities of their resistance patterns to 10 antimicrobial compounds, the prevalence of extended spectrum β-lactamase (ESBL) and ampicillinase C (AmpC) genetic determinants, and class 1 and 2 integrons in 100 chicken meat and 400 stool samples of symptomatic patients in Tehran during June 2018 to March 2019. RESULTS Salmonella was isolated from 75% and 5.5% of the chicken meats and human stool samples, respectively. The chicken meat isolates mainly belonged to serogroup C (88%, 66/75), while the human stool isolates were mainly related to serogroup D (59.1%, 13/22). The MDR phenotype and the most common rates of resistance to antibiotics, including tetracycline, trimethoprim/sulfamethoxazole (TS) and azithromycin, were detected in 4.5% and 45.3%, 59% and 13.6%, 43% and 9.1%, 42% and 9.1% of the human stool and chicken meat samples, respectively. Carriage of bla CTX, bla SHV, and bla PER genes in the meat isolate with ESBL resistance phenotype and bla ACC, bla FOX, and bla CMY-2 among the 7 meat strains with AmpC resistance phenotype was not confirmed using polymerase chain reaction (PCR). High prevalence of class 1 and 2 integrons was characterized and showed a correlation with resistance to TS and chloramphenicol. CONCLUSION These findings showed a lack of association between chicken meats and human isolates due to discrepancy between the characterized serogroups and resistance phenotypes.
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Affiliation(s)
- S. Besharati
- MSc in Microbiology, Department of Microbiology, Faculty of Medicine, Shahed University, Tehran, Iran
| | - A. Sadeghi
- MSc in Microbiology, Department of Microbiology, Faculty of Medicine, Shahed University, Tehran, Iran
| | - F. Ahmadi
- MSc Student in Microbiology, Department of Microbiology, Faculty of Basic Sciences, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - E. Tajeddin
- MSc in Microbiology, Division of Microbiology, National Nutrition and Food Technology Research Institute, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - R. Mohammad Salehi
- Molecular Microbiology Research Center, Faculty of Medicine, Shahed University, Tehran, Iran
| | - F. Fani
- Division of Microbiology, Professor Alborzi Clinical Microbiology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Gh. Pouladfar
- Division of Microbiology, Professor Alborzi Clinical Microbiology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - B. Nikmanesh
- Department of Medical Laboratory Sciences, School of Allied Medical Sciences, Tehran University of Medical Sciences, Tehran, Iran
| | - A. Majidpour
- Division of Microbiology, Anti-Microbial Resistance Research Center, Institute of Immunology and Infectious Diseases (IIID), Iran University of Medical Sciences, Tehran, Iran
| | - S. Soleymanzadeh Moghadam
- MSc in Microbiology, Division of Microbiology, Anti-Microbial Resistance Research Center, Institute of Immunology and Infectious Diseases (IIID), Iran University of Medical Sciences, Tehran, Iran
| | - S. Mirab Samiee
- Health Reference Laboratory, Health Reference Laboratory Research Center, Ministry of Health and Medical Education, Tehran, Iran
| | - M. Rahnamaye Farzami
- Health Reference Laboratory, Health Reference Laboratory Research Center, Ministry of Health and Medical Education, Tehran, Iran
| | - M. Rahbar
- Health Reference Laboratory, Health Reference Laboratory Research Center, Ministry of Health and Medical Education, Tehran, Iran
| | - P. Eslami
- MSc in Microbiology, Department of Microbiology, Central Laboratory, Milad Hospital, Tehran, Iran
| | - N. Rakhshani
- Pathology Laboratory, Mehr Hospital, Tehran, Iran
| | - B. Eshrati
- Center for Communicable Disease Control, Ministry of Health and Medical Education, Tehran, Iran
| | - M. M. Gouya
- Center for Communicable Disease Control, Ministry of Health and Medical Education, Tehran, Iran
| | - F. Fallah
- Department of Microbiology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A. Karimi
- Pediatric Infections Research Center, Research Institute for Children’s Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - P. Owlia
- Molecular Microbiology Research Center, Faculty of Medicine, Shahed University, Tehran, Iran
- These authors contributed equally in this study
| | - M. Alebouyeh
- Pediatric Infections Research Center, Research Institute for Children’s Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- These authors contributed equally in this study
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Karimi A, Razaghi R, Koyama M. A patient-specific numerical modeling of the spontaneous coronary artery dissection in relation to atherosclerosis. Comput Methods Programs Biomed 2019; 182:105060. [PMID: 31514089 DOI: 10.1016/j.cmpb.2019.105060] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Revised: 08/28/2019] [Accepted: 08/31/2019] [Indexed: 06/10/2023]
Abstract
The spontaneous coronary artery dissection (SCAD) is a clinical complication of angioplasty leading to an initiation of a tear/crack in the intima layer of the artery. The crack can propagate to the interface of the intima-media layer following by intramural hematoma. The relation between the SCAD and atherosclerosis is a controversial issue, as some studies stated no correlation between them while others showed that a crack can initiate in the intima but cannot propagate into the atrophied media layer. To investigate the relation between the intraluminal crack propagation in the atherosclerotic artery and SCAD, this study numerically investigated the initiation and propagation of a crack in the intraluminal and radial locations of the healthy and atherosclerotic human coronary arterial walls. The energy release rate, namely J-integral, is computed as a numerical derivative of the strain energy with respect to a crack extension using a user-defined virtual crack method (VCE) of extended finite element method (XFEM). Experimental measurements were carried out to calculate the elasto-plastic mechanical properties of the healthy and atherosclerotic human coronary arteries. The experimental data were then assigned to our own established patient-specific FE model of the coronary artery. Cracks were sketched in the intraluminal and radial locations of the arterial wall and allowed to propagate to the virtual interface of the intima-media to form a false lumen. The results revealed a higher stress at the crack tip of the healthy arterial wall compared to the atherosclerotic one. Lower crack tip opening displacement (CTOD) and crack tip opening angle (CTOA) were observed in the intraluminal crack of the atherosclerotic artery. J-integral of the atherosclerotic arterial wall was also found to be higher than the healthy one at the intraluminal crack. The results revealed that although a crack can initiate in the intraluminal of an atherosclerotic artery, it cannot propagate into the media layer due to a relatively higher rate of the strain energy release in the atherosclerotic arterial wall compared to the healthy one.
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Affiliation(s)
- Alireza Karimi
- Department of Mechanical Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Reza Razaghi
- Research Department, Heel of Scene Ltd., Fukuoka, Japan
| | - Motomichi Koyama
- Institute for Materials Research, Tohoku University, Sendai 980-8577, Japan.
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Farhadi D, Karimi A, Sadeghi AA, Rostamzadeh J, Bedford MR. Effect of a high dose of exogenous phytase and supplementary myo-inositol on mineral solubility of broiler digesta and diets subjected to in vitro digestion assay. Poult Sci 2019; 98:3870-3883. [PMID: 30877748 DOI: 10.3382/ps/pez104] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2018] [Accepted: 03/01/2019] [Indexed: 11/20/2022] Open
Abstract
This study was conducted to evaluate the effect of microbial phytase and myo-inositol supplementation in low non-phytate phosphorus (nPP) diets on pH and the solubility of minerals in an in vitro digestion procedure (IVDP) and to compare this with digesta from birds fed different diets (grower diets) compared to the in vitro test (starter diets). A total of 660 1-day-old broilers were randomly allotted into 11 dietary treatments and fed a corn-soybean-meal-based diet with recommended nPP (positive control; PC), an nPP-deficient diet (negative control; NC), NC diets supplemented with phytase (500; 1,000; 2,000; 3,000; 4,000; 5,000; and 6,000 FTU/kg), an NC diet plus 0.15% myo-inositol, and an NC diet with reduced Ca level (Ca: nPP ratio same as PC) from 1 to 23 D of age. The pH and Ca solubility of the NC diet was increased compared with the PC when subjected to IVDP (P < 0.05). P solubility in the gizzard and jejunal digesta was reduced in the NC compared with the PC diet and this was also reflected in the IVDP. Phytase addition to the NC diets linearly increased (P < 0.05) the pH value and Ca and P solubilities in both digesta and diets subjected to IVDP. Higher doses of microbial phytase increased (P < 0.05) Zn and Fe solubilities in both digesta and IVDP. Myo-inositol supplementation of the NC diet had no effect on mineral solubility, but decreased (P < 0.05) the pH of the IVDP. Lowering the Ca content of the NC diet decreased (P < 0.05) the pH of the in vitro digested diets and Ca solubility in both broiler digesta and IVDP and also increased (P < 0.05) P solubility in both the jejunal digesta and IVDP. Correlations were noted between the solubility of P in the in vitro assay and that in the gizzard and jejunal digesta, and also with bird performance, confirms the usefulness of in vitro assay.
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Affiliation(s)
- D Farhadi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - A A Sadeghi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - J Rostamzadeh
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - M R Bedford
- AB Vista Feed Ingredients, Marlborough, Wiltshire SN8 4AN, UK
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Khosravi N, Zadkarami M, Chobdar F, Hoseini R, Khalesi N, Panahi P, Karimi A. The Value of Urinary Cystatin C Level to Predict Neonatal Kidney Injury. Curr Pharm Des 2019; 24:3002-3004. [PMID: 30227813 DOI: 10.2174/1381612824666180918100819] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2018] [Revised: 09/04/2018] [Accepted: 09/04/2018] [Indexed: 11/22/2022]
Abstract
BACKGROUND The role of urinary cystatin C to early predict acute kidney injury (AKI) in children and neonates remains uncertain. The present study aimed to assess and compare the level of urinary cystatin C in neonates with and those without AKI. METHODS This cross-sectional study was performed on 55 available neonates who were involved by AKI and admitted to the neonatal department at Ali-Asghar hospital in Tehran in 2016. 97 neonates with jaundice and normal serum creatinine level were randomly selected as the control group. In both groups and on admission, the urine levels of cystatin C and creatinine were measured. RESULTS The average urinary level of cystatin C was 162.87 ± 56.50 mmol/mole creatinine in the group with AKI and 68.06 ± 57.16 mmol/mole creatinine in the control group that was significantly higher in former group (p < 0.001). The measurement of cystatin C level in urine could predict kidney injury with a sensitivity of 98.2%, a specificity of 39.2%, a positive predictive value of 47.8%, a negative predictive value of 97.4%, and an accuracy of 60.5%. Assessment of the area under the receiver operating characteristic (ROC) analysis showed that measuring urinary cystatin C level could effectively discriminate kidney injury from normal kidney condition in neonates (AUC = 0.868, 95CI: 0.811 - 0.925, P < 0.001). The best cutoff value of urinary cystatin C level to predict kidney injury was shown to be 41.5 mmol/mole creatinine yielding a sensitivity of 98.2% and a specificity of 46.4%. CONCLUSION Measurement of cystatin C in urine is an early sensitive method to diagnose neonatal kidney injury.
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Affiliation(s)
- Nastaran Khosravi
- Ali Asghar Hospital, Iran University of Medical Sciences, Tehran, Iran
| | - Masoud Zadkarami
- Ali Asghar Hospital, Iran University of Medical Sciences, Tehran, Iran
| | - Farhad Chobdar
- Ali Asghar Hospital, Iran University of Medical Sciences, Tehran, Iran
| | - Rozita Hoseini
- Iran University of Medical Sciences, Pediatric Renal Transplantation and Dialysis Research Center Tehran, Tehran, Iran
| | - Nasrin Khalesi
- Ali Asghar Hospital, Iran University of Medical Sciences, Tehran, Iran
| | - Parsa Panahi
- School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Alireza Karimi
- Department of Mechanical Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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Abstract
AbstractIrregular growth in the surrounding lands is one of the most important issues for the city managers and programmers at various levels. Whereas nowadays study the process of land use changes to urban use plays the main role in long time decisions and programs, predicting the process of city growth and its modeling in future with precise methods for management and urban expansion control will be necessary more than other times. One of urban growth modeling is cellular automata model. This model has been used widely in urban studies because of its dynamic nature, ability of Integration with other models, ability to modify the model and required data availability. In this article, to maximize the efficiency of the cellular automata model and its constraints, the integration of the AHP automated cell model and cellular automata model have been used; and its accuracy has been evaluated. This article has been practical because its related principles has been collected in a documentary manner and has been used to analyses the issue in comparative and quantitative methods. Initially, the unplanned growth of Qazvin city has been investigated by Holdern and Shannon model. Then main parameters including distance from roads, land prices, distance from faults, distance from the rivers, soil gender, slope, permission to build land, topography, landscape, view to gardens and forest park as parameters involved in the development of Qazvin city are considered. The input data used in this research are Landsat tm and DEM images of the city of Qazvin in 1996 and 2016. Also, to evaluate the correctness of the model responses, the map of the developed regions in 2016 and the Kappa coefficient have been used. The Kappa coefficient is 92.3%, which is considered significant and appropriate and gave the fact that the Kappa number is acceptable. The Qazvin simulation was made in 2026. The results show that the proposed integrated model is suitable for studying urban growth.
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Karimi A, Razaghi R, Biglari H, Rahmati SM, Sandbothe A, Hasani M. Finite element modeling of the periodontal ligament under a realistic kinetic loading of the jaw system. Saudi Dent J 2019; 32:349-356. [PMID: 33132663 PMCID: PMC7588630 DOI: 10.1016/j.sdentj.2019.10.005] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2019] [Revised: 09/29/2019] [Accepted: 10/20/2019] [Indexed: 11/25/2022] Open
Abstract
Purpose The stresses and deformations in the periodontal ligament (PDL) under the realistic kinetic loading of the jaw system, i.e., chewing, are difficult to be determined numerically as the mechanical properties of the PDL is variably present in different finite element (FE) models. This study was aimed to conduct a dynamic finite element (FE) simulation to investigate the role of the PDL (PDL) material models in the induced stresses and deformations using a simplified patient-specific FE model of a human jaw system. Methods To do that, a realistic kinetic loading of chewing was applied to the incisor point, contralateral, and ipsilateral condyles, through the experimentally proven trajectory approach. Three different material models, including the elasto-plastic, hyperelastic, and viscoelastic, were assigned to the PDL, and the resulted stresses of the tooth FE model were computed and compared. Results The results revealed the highest von Mises stress of 620.14 kPa and the lowest deformation of 0.16 mm in the PDL when using the hyperelastic model. The concentration of the stress in the elastoplastic and viscoelastic models was in the mid-root and apex of the PDL, while for the hyperelastic model, it was concentrated in the cervical margin. The highest deformation in the PDL regardless of the employed material model was located in the caudal direction of the tooth. The viscoelastic PDL absorbed the transmitted energy from the dentine and led to lower stress in the cancellous bone compared to the elastoplastic and hyperelastic material models. Conclusion These results have implications not only for understanding the stresses and deformations in the PDL under chewing but also for providing comprehensive information for the medical and biomechanical experts in regard of the role of the material models being used to address the mechanical behavior of the PDL in other components of the tooth.
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Affiliation(s)
- Alireza Karimi
- Department of Mechanical Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Reza Razaghi
- Department of Mechanical Engineering, University of Tabriz, Tabriz 51666, Iran.,Basir Eye Health Research Center, Tehran, Iran
| | - Hasan Biglari
- Department of Mechanical Engineering, University of Tabriz, Tabriz 51666, Iran
| | | | - Alix Sandbothe
- Children's Hospital & Medical Center, Omaha, NE, United States
| | - Mojtaba Hasani
- Department of Biomedical Engineering, Faculty of Engineering, University of Isfahan, Isfahan, Iran
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