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Xu C, Wei L, Huang S, Yang C, Wang Y, Yuan H, Xu Q, Zhang W, Wang M, Zeng X, Luo J. Drought Resistance in Qingke Involves a Reprogramming of the Phenylpropanoid Pathway and UDP-Glucosyltransferase Regulation of Abiotic Stress Tolerance Targeting Flavonoid Biosynthesis. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:3992-4005. [PMID: 33769045 DOI: 10.1021/acs.jafc.0c07810] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Tibetan hulless barley (qingke) is an important food crop in the Tibetan plateau. However, it often suffers from drought stress resulting in reduction of food production because of the extreme plateau environment. To elucidate the molecular mechanisms underlying the drought resistance of qingke, the transcriptomic and metabolomic responses of drought-sensitive (D) and drought-resistant (XL) accessions were characterized in experiments with a time course design. The phenylpropanoid pathway was reprogrammed by downregulating the lignin pathway and increasing the biosynthesis of flavonoids and anthocyanins, and this regulation improved plant tolerance for drought stress. Besides, flavonoid glycosides have induced accumulation of metabolites that participated in drought stress resistance. HVUL7H11410 exhibited the activity of wide-spectrum glucosyltransferase and mediated flavonoid glycosylation to enhance drought stress resistance. Overall, the findings provide insights into the regulatory mechanism underlying drought stress tolerance associated with metabolic reprogramming. Furthermore, the flavonoid-enriched qingke is more tolerant to drought stress and can be used as a functional food to benefit human health.
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Affiliation(s)
- Congping Xu
- College of Tropical Crops, Hainan University, Haikou 570228, China
| | - Lingling Wei
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa 850002, China
| | - Sishu Huang
- College of Tropical Crops, Hainan University, Haikou 570228, China
| | - Chunbao Yang
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa 850002, China
- Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences Lhasa, Tibet 850002, China
- Plant Sciences College, Tibet Agriculture & Animal Husbandry University, Nyingchi, Tibet 860000, China
| | - Yulin Wang
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa 850002, China
- Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences Lhasa, Tibet 850002, China
- Plant Sciences College, Tibet Agriculture & Animal Husbandry University, Nyingchi, Tibet 860000, China
| | - Hongjun Yuan
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa 850002, China
- Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences Lhasa, Tibet 850002, China
- Plant Sciences College, Tibet Agriculture & Animal Husbandry University, Nyingchi, Tibet 860000, China
| | - Qijun Xu
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa 850002, China
- Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences Lhasa, Tibet 850002, China
- Plant Sciences College, Tibet Agriculture & Animal Husbandry University, Nyingchi, Tibet 860000, China
| | - Weiqin Zhang
- Wuhan Metware Biotechnology Co., Ltd., Wuhan 430070, China
| | - Mu Wang
- Plant Sciences College, Tibet Agriculture & Animal Husbandry University, Nyingchi, Tibet 860000, China
| | - Xingquan Zeng
- State Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa 850002, China
- Agricultural Research Institute, Tibet Academy of Agricultural and Animal Husbandry Sciences Lhasa, Tibet 850002, China
- Plant Sciences College, Tibet Agriculture & Animal Husbandry University, Nyingchi, Tibet 860000, China
| | - Jie Luo
- College of Tropical Crops, Hainan University, Haikou 570228, China
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Changenet V, Macadré C, Boutet-Mercey S, Magne K, Januario M, Dalmais M, Bendahmane A, Mouille G, Dufresne M. Overexpression of a Cytochrome P450 Monooxygenase Involved in Orobanchol Biosynthesis Increases Susceptibility to Fusarium Head Blight. FRONTIERS IN PLANT SCIENCE 2021; 12:662025. [PMID: 33868356 PMCID: PMC8048717 DOI: 10.3389/fpls.2021.662025] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Accepted: 03/11/2021] [Indexed: 05/28/2023]
Abstract
Fusarium Head Blight (FHB) is a cereal disease caused primarily by the ascomycete fungus Fusarium graminearum with public health issues due to the production of mycotoxins including deoxynivalenol (DON). Genetic resistance is an efficient protection means and numerous quantitative trait loci have been identified, some of them related to the production of resistance metabolites. In this study, we have functionally characterized the Brachypodium distachyon BdCYP711A29 gene encoding a cytochrome P450 monooxygenase (CYP). We showed that BdCYP711A29 belongs to an oligogenic family of five members. However, following infection by F. graminearum, BdCYP711A29 is the only copy strongly transcriptionally induced in a DON-dependent manner. The BdCYP711A29 protein is homologous to the Arabidopsis thaliana MAX1 and Oryza sativa MAX1-like CYPs representing key components of the strigolactone biosynthesis. We show that BdCYP711A29 is likely involved in orobanchol biosynthesis. Alteration of the BdCYP711A29 sequence or expression alone does not modify plant architecture, most likely because of functional redundancy with the other copies. B. distachyon lines overexpressing BdCYP711A29 exhibit an increased susceptibility to F. graminearum, although no significant changes in defense gene expression were detected. We demonstrate that both orobanchol and exudates of Bd711A29 overexpressing lines stimulate the germination of F. graminearum macroconidia. We therefore hypothesize that orobanchol is a susceptibility factor to FHB.
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Affiliation(s)
- Valentin Changenet
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
| | - Catherine Macadré
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
| | - Stéphanie Boutet-Mercey
- Institut Jean-Pierre Bourgin, INRAE, AgroParisTech, Université Paris-Saclay, Versailles, France
| | - Kévin Magne
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
| | - Mélanie Januario
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
| | - Marion Dalmais
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
| | - Abdelhafid Bendahmane
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
| | - Grégory Mouille
- Institut Jean-Pierre Bourgin, INRAE, AgroParisTech, Université Paris-Saclay, Versailles, France
| | - Marie Dufresne
- Université Paris-Saclay, CNRS, INRAE, University of Evry, Institute of Plant Sciences Paris-Saclay, Orsay, France
- Université de Paris, Institute of Plant Sciences Paris-Saclay, Orsay, France
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Singh H, Bhat JA, Singh VP, Corpas FJ, Yadav SR. Auxin metabolic network regulates the plant response to metalloids stress. JOURNAL OF HAZARDOUS MATERIALS 2021; 405:124250. [PMID: 33109410 DOI: 10.1016/j.jhazmat.2020.124250] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Revised: 09/17/2020] [Accepted: 10/08/2020] [Indexed: 05/13/2023]
Abstract
Metalloids are among the major pollutants posing a risk to the environment and global food security. Plant roots uptake these toxic metalloids from the soil along with other essential minerals. Plants respond to metalloid stress by regulating the distribution and levels of various endogenous phytohormones. Recent research showed that auxin is instrumental in mediating resilience to metalloid-induced stress in plants. Exogenous supplementation of the auxin or plant growth-promoting micro-organisms (PGPMs) alleviates metalloid uptake, localization, and accumulation in the plant tissues, thereby improving plant growth under metalloid stress. Moreover, auxin triggers various biological responses such as the production of enzymatic and non-enzymatic antioxidants to combat nitro-oxidative stress induced by the metalloids. However, an in-depth understanding of the auxin stimulated molecular and physiological responses to the metalloid toxicity needs to be investigated in future studies. The current review attempts to provide an update on the recent advances and the current state-of-the-art associated with auxin and metalloid interaction, which could be used as a start point to develop biotechnological tools and create an eco-friendly environment.
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Affiliation(s)
- Harshita Singh
- Department of Biotechnology, Indian Institute of Technology, Roorkee 247667, Uttarakhand, India
| | - Javaid Akhter Bhat
- National Center for Soybean Improvement, Key L aboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Vijay Pratap Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, University of Allahabad, Prayagraj 211002, India
| | - Francisco J Corpas
- Department of Biochemistry, Cell and Molecular Biology, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas (CSIC), C/Profesor Albareda, 1, 18008 Granada, Spain
| | - Shri Ram Yadav
- Department of Biotechnology, Indian Institute of Technology, Roorkee 247667, Uttarakhand, India.
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Sadak MS, Ramadan AAEM. Impact of melatonin and tryptophan on water stress tolerance in white lupine ( Lupinus termis L.). PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2021; 27:469-481. [PMID: 33854277 PMCID: PMC7981349 DOI: 10.1007/s12298-021-00958-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Revised: 02/10/2021] [Accepted: 02/14/2021] [Indexed: 06/04/2023]
Abstract
Melatonin has been identified as a signal molecule that regulates plant responses to different abiotic and biotic stresses. Melatonin (MT) and its precursor tryptophan (Try) have a major role in improving plant stress tolerance to different environmental stresses such as water deficiency. The rapid increase in the Egyptian population caused insufficient protein sources, especially those of animal origin, in their diet. The possible solution is to augment the diet with legumes such as white lupine which are relatively rich in protein. Thus, the current experimental work was carried out to find changes in growth, biochemical aspects and yield quantity and quality of white lupine plant with spraying of both MT and Try at different concentrations on plant shoot under water deficit stress conditions. Results showed that water deficit (75 or 50% of water irrigation requirements; WIR) caused significant reduction in growth, photosynthetic pigments, indole acetic acid and yield compared with those received 100% WIR. Seed yield significantly decreased (p < 0.05) by 26.98 and 41.64% by decreasing WIR to 75 and 50%. The decrease was accompanied by significant increase in phenolic contents, hydrogen peroxide, lipid peroxidation and some antioxidant enzymes, while nitrate reductase enzyme was decreased. However, external application of either MT or Try significantly alleviated the adverse effects of water deficit (growth suppression), since MT or Try-treated plants recovered more quickly than untreated plants. Moreover, MT or Try-treated plants had higher photosynthetic pigments, indole acetic acid, phenolic, as well as yield quantity and quality under the three WIR as compared with untreated plants. Melatonin treatment at 100 µM and Tryptophan at 200 µM increased weight of seeds/plant by 78.29 and 52.19%, 71.49 and 43.78% and 41.21 and 13.07% in plants irrigated with 100, 75 and 50% WIR, respectively. Exogenous MT and Try significantly reduced hydrogen peroxide and malondialdehyde content, while markedly increased the activities of antioxidant enzymes and nitrate reductase under different WIR. Finally, the current study concluded that MT and Try treatments alleviated the detrimental effects of water deficiency and accelerated the recovery mainly via improving white lupine plants tolerance in forms of enhancing photosynthetic pigments, indole acetic acid, phenolic and antioxidant capacity.
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Affiliation(s)
- Mervat Shamoon Sadak
- Department of Botany, Agricultural and Biological Research Division, National Research Centre, 33 El Bohouth Street, P.O. Box 12622, Dokki, Giza Egypt
| | - Amany Abd El-Mohsen Ramadan
- Department of Botany, Agricultural and Biological Research Division, National Research Centre, 33 El Bohouth Street, P.O. Box 12622, Dokki, Giza Egypt
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Upadhyay SK, Ahmad M, Srivastava AK, Abhilash PC, Sharma B. Optimization of eco-friendly novel amendments for sustainable utilization of Fly ash based on growth performance, hormones, antioxidant, and heavy metal translocation in chickpea (Cicer arietinum L.) plant. CHEMOSPHERE 2021; 267:129216. [PMID: 33340884 DOI: 10.1016/j.chemosphere.2020.129216] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2020] [Revised: 11/25/2020] [Accepted: 12/03/2020] [Indexed: 05/10/2023]
Abstract
The present study has focused on the evaluation of the maximum amount of flyash (FA) utilization augmentation in the acidic soil (pH 6.1) with the manure during the growth performance and impact of toxic heavy metals under the pot experiment. The 15 days pre-incubated 40% FA treated combination (T16) significantly (P < 0.05) influenced growth performance of chickpea plant after 60 days. The dry weight as well as the contents of N, P, and K increased from 38.8 to 78.53%, 118 to 86%, 148 to 115%, and 95.8 to 95%, respectively, over control in T15 combination after 30 and 60 days. T15 and T16 both treatments induced a significant rise in IAA and GB from 76 to 75.5% and 50%-45%, respectively, after 60 days. The significant increase in the activities of SOD, APX, CAT, and GR with 47%, 56%, 42%, and 28%, respectively, over control was observed in T16 treated combination after 60 days. The significant (P < 0.05) influence in the antioxidant activities, levels of GB, Proline, TSS, and RS were observed across the treatments and durations. The levels of BCF and TF both were <1 in T16 treated plants for toxic heavy metals (Pb, Mo, Cd, and Al), which indicated a negligible extent of translocation from root to shoot and shoot to edible parts in the plants. The results demonstrated that 40% FA supplementation with manure could induce the growth of chickpea in slightly acidic soil and reduce the translocation of toxic metals in the edible parts of the plant.
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Affiliation(s)
- Sudhir K Upadhyay
- Department of Environmental Science, V.B.S. Purvanhal University, Jaunpur, 222003, India.
| | - Mustaqeem Ahmad
- High Altitude Division, CSIR-Institute of Himalayan Bioresource Technology, Palampur, 176 061, India
| | | | | | - Bechan Sharma
- Department of Biochemistry, Faculty of Science, University of Allahabad, Allahabad, 211002, India
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Comparative transcriptome analysis of Rheum australe, an endangered medicinal herb, growing in its natural habitat and those grown in controlled growth chambers. Sci Rep 2021; 11:3702. [PMID: 33580100 PMCID: PMC7881009 DOI: 10.1038/s41598-020-79020-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2020] [Accepted: 11/02/2020] [Indexed: 01/30/2023] Open
Abstract
Rheum australe is an endangered medicinal herb of high altitude alpine region of Himalayas and is known to possess anti-cancerous properties. Unlike many herbs of the region, R. australe has broad leaves. The species thrives well under the environmental extremes in its niche habitat, therefore an understanding of transcriptome of R. australe to environmental cues was of significance. Since, temperature is one of the major environmental variables in the niche of R. australe, transcriptome was studied in the species growing in natural habitat and those grown in growth chambers maintained at 4 °C and 25 °C to understand genes associated with different temperatures. A total of 39,136 primarily assembled transcripts were obtained from 10,17,74,336 clean read, and 21,303 unigenes could match to public databases. An analysis of transcriptome by fragments per kilobase of transcript per million, followed by validation through qRT-PCR showed 22.4% up- and 22.5% down-regulated common differentially expressed genes in the species growing under natural habitat and at 4 °C as compared to those at 25 °C. These genes largely belonged to signaling pathway, transporters, secondary metabolites, phytohormones, and those associated with cellular protection, suggesting their importance in imparting adaptive advantage to R. australe in its niche.
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Comprehensive Analysis and Expression Profiling of PIN, AUX/LAX, and ABCB Auxin Transporter Gene Families in Solanum tuberosum under Phytohormone Stimuli and Abiotic Stresses. BIOLOGY 2021; 10:biology10020127. [PMID: 33562678 PMCID: PMC7915614 DOI: 10.3390/biology10020127] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2021] [Revised: 02/01/2021] [Accepted: 02/02/2021] [Indexed: 11/16/2022]
Abstract
Simple Summary In this study, we provide comprehensive information on auxin transporter gene families in potato, including basic parameters, chromosomal distribution, phylogeny, co-expression network analysis, gene structure, tissue-specific expression patterns, subcellular localization, transcription analysis under exogenous hormone stimuli and abiotic stresses, and cis-regulatory element prediction. The responsiveness of auxin transporter family genes to auxin and polar auxin transport inhibitors implied their possible roles in auxin homoeostasis and redistribution. Additionally, the differential expression levels of auxin transporter family genes in response to abscisic acid and abiotic stresses suggested their specific adaptive mechanisms on tolerance to various environmental stimuli. Promoter cis-regulatory element description analyses indicated that a number of cis-regulatory elements within the promoters of auxin transporter genes in potato were targeted by relevant transcription factors to respond to diverse stresses. We are confident that our results provide a foundation for a better understanding of auxin transporters in potato, as we have demonstrated the biological significance of this family of genes in hormone signaling and adaption to environmental stresses. Abstract Auxin is the only plant hormone that exhibits transport polarity mediated by three families: auxin resistant (AUX) 1/like AUX1 (LAX) influx carriers, pin-formed (PIN) efflux carriers, and ATP-binding cassette B (ABCB) influx/efflux carriers. Extensive studies about the biological functions of auxin transporter genes have been reported in model plants. Information regarding these genes in potato remains scarce. Here, we conducted a comprehensive analysis of auxin transporter gene families in potato to examine genomic distributions, phylogeny, co-expression analysis, gene structure and subcellular localization, and expression profiling using bioinformatics tools and qRT-PCR analysis. From these analyses, 5 StLAXs, 10 StPINs, and 22 StABCBs were identified in the potato genome and distributed in 10 of 18 gene modules correlating to the development of various tissues. Transient expression experiments indicated that three representative auxin transporters showed plasma membrane localizations. The responsiveness to auxin and auxin transport inhibitors implied their possible roles in mediating intercellular auxin homoeostasis and redistribution. The differential expression under abscisic acid and abiotic stresses indicated their specific adaptive mechanisms regulating tolerance to environmental stimuli. A large number of auxin-responsive and stress-related cis-elements within their promoters could account for their responsiveness to diverse stresses. Our study aimed to understand the biological significance of potato auxin transporters in hormone signaling and tolerance to environmental stresses.
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Fagny M, Kuijjer ML, Stam M, Joets J, Turc O, Rozière J, Pateyron S, Venon A, Vitte C. Identification of Key Tissue-Specific, Biological Processes by Integrating Enhancer Information in Maize Gene Regulatory Networks. Front Genet 2021; 11:606285. [PMID: 33505431 PMCID: PMC7834273 DOI: 10.3389/fgene.2020.606285] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2020] [Accepted: 12/03/2020] [Indexed: 12/27/2022] Open
Abstract
Enhancers are key players in the spatio-temporal coordination of gene expression during numerous crucial processes, including tissue differentiation across development. Characterizing the transcription factors (TFs) and genes they connect, and the molecular functions underpinned is important to better characterize developmental processes. In plants, the recent molecular characterization of enhancers revealed their capacity to activate the expression of several target genes. Nevertheless, identifying these target genes at a genome-wide level is challenging, particularly for large-genome species, where enhancers and target genes can be hundreds of kilobases away. Therefore, the contribution of enhancers to plant regulatory networks remains poorly understood. Here, we investigate the enhancer-driven regulatory network of two maize tissues at different stages: leaves at seedling stage (V2-IST) and husks (bracts) at flowering. Using systems biology, we integrate genomic, epigenomic, and transcriptomic data to model the regulatory relationships between TFs and their potential target genes, and identify regulatory modules specific to husk and V2-IST. We show that leaves at the V2-IST stage are characterized by the response to hormones and macromolecules biogenesis and assembly, which are regulated by the BBR/BPC and AP2/ERF TF families, respectively. In contrast, husks are characterized by cell wall modification and response to abiotic stresses, which are, respectively, orchestrated by the C2C2/DOF and AP2/EREB families. Analysis of the corresponding enhancer sequences reveals that two different transposable element families (TIR transposon Mutator and MITE Pif/Harbinger) have shaped part of the regulatory network in each tissue, and that MITEs have provided potential new TF binding sites involved in husk tissue-specificity.
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Affiliation(s)
- Maud Fagny
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, France
| | - Marieke Lydia Kuijjer
- Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo, Oslo, Norway
- Department of Pathology, Leiden University Medical Center, Leiden, Netherlands
| | - Maike Stam
- Plant Development and (Epi) Genetics, Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
| | - Johann Joets
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, France
| | - Olivier Turc
- LEPSE, Univ Montpellier, INRAE, Institut Agro, Montpellier, France
| | - Julien Rozière
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, France
- Université Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
- Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
| | - Stéphanie Pateyron
- Université Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
- Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
| | - Anthony Venon
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, France
| | - Clémentine Vitte
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, France
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Xing X, Ding Y, Jin J, Song A, Chen S, Chen F, Fang W, Jiang J. Physiological and Transcripts Analyses Reveal the Mechanism by Which Melatonin Alleviates Heat Stress in Chrysanthemum Seedlings. FRONTIERS IN PLANT SCIENCE 2021; 12:673236. [PMID: 34630446 PMCID: PMC8493036 DOI: 10.3389/fpls.2021.673236] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Accepted: 08/24/2021] [Indexed: 05/08/2023]
Abstract
Heat stress limits the growth and development of chrysanthemum seedlings. Although melatonin (MT) has been linked to the heat stress response in plants, research on the underlying molecular mechanisms is scarce. In this study, the regulatory networks of MT on heat stress in chrysanthemum seedlings were explored. Physiological measurements suggested that MT not only reduced malondialdehyde accumulation, hydrogen peroxide content, and superoxide anion free radical generation rate, but also significantly promoted osmotic regulation substance synthesis (proline and soluble protein), antioxidant accumulation (GSH and AsA), and the antioxidant enzyme activities (SOD, POD, CAT, and APX) in chrysanthemum leaves under heat stress. Furthermore, MT increased the fresh weight, dry weight, chlorophyll content, photosynthesis rate, and gas exchange indexes. Further, RNA-seq results revealed 33,497 and 36,740 differentially expressed genes in the S/Con and SMT/ConMT comparisons, respectively. The differences in the comparisons revealed that MT regulated heat shock transcription factors (HSFs) and heat shock proteins (HSPs), and the genes involved in Ca2+ signal transduction (CNGCs and CAM/CMLs), starch and sucrose metabolism (EDGL, BGLU, SuS, and SPS), hormone (PP2Cs, AUX/IAAs, EBFs, and MYC2), chlorophyll metabolism (HEMA and PORA), flavonoid biosynthesis (CHS, DFR, and FNS), and carotenoid biosynthesis (DXPS, GGDP, and PSY). MT effectively improved chrysanthemum seedling heat-resistance. Our study, thus, provides novel evidence of a gene network regulated by MT under heat stress.
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Yadav AN, Kaur T, Devi R, Kour D, Yadav A, Dikilitas M, Usmani Z, Yadav N, Abdel-Azeem AM, Ahluwalia AS. Biodiversity and Biotechnological Applications of Industrially Important Fungi: Current Research and Future Prospects. Fungal Biol 2021. [DOI: 10.1007/978-3-030-67561-5_17] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Seed Priming with Phytohormones: An Effective Approach for the Mitigation of Abiotic Stress. PLANTS 2020; 10:plants10010037. [PMID: 33375667 PMCID: PMC7824124 DOI: 10.3390/plants10010037] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 12/21/2020] [Accepted: 12/22/2020] [Indexed: 12/15/2022]
Abstract
Plants are often exposed to abiotic stresses such as drought, salinity, heat, cold, and heavy metals that induce complex responses, which result in reduced growth as well as crop yield. Phytohormones are well known for their regulatory role in plant growth and development, and they serve as important chemical messengers, allowing plants to function during exposure to various stresses. Seed priming is a physiological technique involving seed hydration and drying to improve metabolic processes prior to germination, thereby increasing the percentage and rate of germination and improving seedling growth and crop yield under normal and various biotic and abiotic stresses. Seed priming allows plants to obtain an enhanced capacity for rapidly and effectively combating different stresses. Thus, seed priming with phytohormones has emerged as an important tool for mitigating the effects of abiotic stress. Therefore, this review discusses the potential role of priming with phytohormones to mitigate the harmful effects of abiotic stresses, possible mechanisms for how mitigation is accomplished, and roles of priming on the enhancement of crop production.
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Gaillochet C, Burko Y, Platre MP, Zhang L, Simura J, Willige BC, Kumar SV, Ljung K, Chory J, Busch W. HY5 and phytochrome activity modulate shoot-to-root coordination during thermomorphogenesis in Arabidopsis. Development 2020; 147:226051. [PMID: 33144393 DOI: 10.1242/dev.192625] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Accepted: 10/26/2020] [Indexed: 01/15/2023]
Abstract
Temperature is one of the most impactful environmental factors to which plants adjust their growth and development. Although the regulation of temperature signaling has been extensively investigated for the aerial part of plants, much less is known and understood about how roots sense and modulate their growth in response to fluctuating temperatures. Here, we found that shoot and root growth responses to high ambient temperature are coordinated during early seedling development in Arabidopsis A shoot signaling module that includes HY5, the phytochromes and the PIFs exerts a central function in coupling these growth responses and maintaining auxin levels in the root. In addition to the HY5/PIF-dependent shoot module, a regulatory axis composed of auxin biosynthesis and auxin perception factors controls root responses to high ambient temperature. Taken together, our findings show that shoot and root developmental responses to temperature are tightly coupled during thermomorphogenesis and suggest that roots integrate energy signals with local hormonal inputs.
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Affiliation(s)
- Christophe Gaillochet
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA
| | - Yogev Burko
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA.,Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA 92037, USA
| | - Matthieu Pierre Platre
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA
| | - Ling Zhang
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA
| | - Jan Simura
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden
| | - Björn C Willige
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA
| | - S Vinod Kumar
- Department of Biosciences, College of Life and Environmental Sciences, Stocker Road, Exeter EX4 4QD, UK
| | - Karin Ljung
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 83 Umeå, Sweden
| | - Joanne Chory
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA.,Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA 92037, USA
| | - Wolfgang Busch
- Plant Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA.,Integrative Biology Laboratory, Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA
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63
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Garrido-Vargas F, Godoy T, Tejos R, O’Brien JA. Overexpression of the Auxin Receptor AFB3 in Arabidopsis Results in Salt Stress Resistance and the Modulation of NAC4 and SZF1. Int J Mol Sci 2020; 21:ijms21249528. [PMID: 33333760 PMCID: PMC7765236 DOI: 10.3390/ijms21249528] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Revised: 11/18/2020] [Accepted: 11/19/2020] [Indexed: 12/15/2022] Open
Abstract
Soil salinity is a key problem for crop production worldwide. High salt concentration in soil negatively modulates plant growth and development. In roots, salinity affects the growth and development of both primary and lateral roots. The phytohormone auxin regulates various developmental processes during the plant’s life cycle, including several aspects of root architecture. Auxin signaling involves the perception by specialized receptors which module several regulatory pathways. Despite their redundancy, previous studies have shown that their functions can also be context-specific depending on tissue, developmental or environmental cues. Here we show that the over-expression of Auxin Signaling F-Box 3 receptor results in an increased resistance to salinity in terms of root architecture and germination. We also studied possible downstream signaling components to further characterize the role of auxin in response to salt stress. We identify the transcription factor SZF1 as a key component in auxin-dependent salt stress response through the regulation of NAC4. These results give lights of an auxin-dependent mechanism that leads to the modulation of root system architecture in response to salt identifying a hormonal cascade important for stress response.
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Affiliation(s)
- Fernanda Garrido-Vargas
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile;
| | - Tamara Godoy
- Laboratorio de Biotecnología Celular, Facultad de Recursos Naturales Renovables, Universidad Arturo Prat, Iquique 1100000, Chile; (T.G.); (R.T.)
| | - Ricardo Tejos
- Laboratorio de Biotecnología Celular, Facultad de Recursos Naturales Renovables, Universidad Arturo Prat, Iquique 1100000, Chile; (T.G.); (R.T.)
| | - José Antonio O’Brien
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile;
- Departamento de Fruticultura y Enología, Facultad de Agronomía e Ingeniería Forestal, Pontificia Universidad Católica de Chile, Santiago 8331150, Chile
- Correspondence:
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Wang X, Whalley WR, Miller AJ, White PJ, Zhang F, Shen J. Sustainable Cropping Requires Adaptation to a Heterogeneous Rhizosphere. TRENDS IN PLANT SCIENCE 2020; 25:1194-1202. [PMID: 32830043 DOI: 10.1016/j.tplants.2020.07.006] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Revised: 07/02/2020] [Accepted: 07/09/2020] [Indexed: 05/19/2023]
Abstract
Root-soil interactions in the rhizosphere are central to resource acquisition and crop production in agricultural systems. However, apart from studies in idealized experimental systems, rhizosphere processes in real agricultural soils in situ are largely uncharacterized. This limits the contribution of rhizosphere science to agriculture and the ongoing Green Revolution. Here, we argue that understanding plant responses to soil heterogeneity is key to understanding rhizosphere processes. We highlight rhizosphere sensing and root-induced soil modification in the context of heterogeneous soil structure, resource distribution, and root-soil interactions. A deeper understanding of the integrated and dynamic root-soil interactions in the heterogeneously structured rhizosphere could increase crop production and resource use efficiency towards sustainable agriculture.
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Affiliation(s)
- Xin Wang
- Department of Plant Nutrition, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Key Laboratory of Plant-Soil Interactions, Ministry of Education, Beijing 100193, PR China
| | | | | | - Philip J White
- Ecological Science Group, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK; National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China; Distinguished Scientist Fellowship Program, King Saud University, Riyadh 11451, Saudi Arabia
| | - Fusuo Zhang
- Department of Plant Nutrition, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Key Laboratory of Plant-Soil Interactions, Ministry of Education, Beijing 100193, PR China
| | - Jianbo Shen
- Department of Plant Nutrition, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, Key Laboratory of Plant-Soil Interactions, Ministry of Education, Beijing 100193, PR China.
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Chandra S, Satapathy L, Basu S, Jha SK, Kumar M, Mukhopadhyay K. Characterization of the leaf rust responsive ARF genes in wheat (Triticum aestivum L.). PLANT CELL REPORTS 2020; 39:1639-1654. [PMID: 32892289 DOI: 10.1007/s00299-020-02591-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 08/26/2020] [Indexed: 05/09/2023]
Abstract
Genome-wide identification, classification, functional characterization and expression analysis of Auxin Responsive Factor (ARF) gene family in wheat reveal their attributes and role during leaf rust infection. Auxins are important plant growth regulators that also impact plant-pathogen interaction. Auxin responsive factors (ARF) are plant specific transcription factors that control responses to auxins. Whole genome investigation of ARF gene family is limited in allohexaploid wheat (Triticum aestivum L.). Comprehensive study of this gene family was carried out by employing the currently available reference genome sequence of wheat. In total, 27 ARF genes were identified and located on the wheat genome as well as were positioned on wheat chromosome arms. Additionally, examination of the predicted genes unveiled a decent degree of relatedness within and among the phylogenetic clades. Leaf rust, caused by the obligate biotrophic fungal pathogen Puccinia triticina, is responsible for drastic loss of wheat crop worldwide reducing grain yield by 10-90%. Expression profiling of ARF genes in retort to leaf rust infection indicated their differential regulation during this plant-pathogen interaction. Highest expression of ARF genes were observed at 12 hpi that was maintained up to 72 hpi during incompatible interaction, whereas the high expression levels receded at 48 hpi during compatible interactions. Few of the identified ARF genes were likely to be post-transcriptionally regulated by microRNAs. Many light and stress responsive elements were detected in the promoter regions of ARF genes. Microsynteny analysis showed the conservation of ARF genes within the members of the Poaceae family. This study provides fundamental details for understanding the different types of ARF genes in wheat and there putative roles during leaf rust-wheat interaction.
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Affiliation(s)
- Saket Chandra
- Department of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India
- Department of Plant Sciences, University of Idaho, Moscow, ID, 83844, USA
| | - Lopamudra Satapathy
- Department of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India
- Faculty of Agriculture, Usha Martin University, Angara, Ranchi, Jharkhand, 835103, India
| | - Srirupa Basu
- Department of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India
| | | | - Manish Kumar
- Department of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India
| | - Kunal Mukhopadhyay
- Department of Bio-Engineering, Birla Institute of Technology, Mesra, Ranchi, Jharkhand, 835215, India.
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Wanichthanarak K, Boonchai C, Kojonna T, Chadchawan S, Sangwongchai W, Thitisaksakul M. Deciphering rice metabolic flux reprograming under salinity stress via in silico metabolic modeling. Comput Struct Biotechnol J 2020; 18:3555-3566. [PMID: 33304454 PMCID: PMC7708941 DOI: 10.1016/j.csbj.2020.11.023] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 11/12/2020] [Accepted: 11/13/2020] [Indexed: 11/30/2022] Open
Abstract
Rice is one of the most economically important commodities globally. However, rice plants are salt susceptible species in which high salinity can significantly constrain its productivity. Several physiological parameters in adaptation to salt stress have been observed, though changes in metabolic aspects remain to be elucidated. In this study, rice metabolic activities of salt-stressed flag leaf were systematically characterized. Transcriptomics and metabolomics data were combined to identify disturbed pathways, altered metabolites and metabolic hotspots within the rice metabolic network under salt stress condition. Besides, the feasible flux solutions in different context-specific metabolic networks were estimated and compared. Our findings highlighted metabolic reprogramming in primary metabolic pathways, cellular respiration, antioxidant biosynthetic pathways, and phytohormone biosynthetic pathways. Photosynthesis and hexose utilization were among the major disturbed pathways in the stressed flag leaf. Notably, the increased flux distribution of the photorespiratory pathway could contribute to cellular redox control. Predicted flux statuses in several pathways were consistent with the results from transcriptomics, end-point metabolomics, and physiological studies. Our study illustrated that the contextualized genome-scale model together with multi-omics analysis is a powerful approach to unravel the metabolic responses of rice to salinity stress.
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Key Words
- 3-PGA, 3-Phosphoglycerate
- ADH, Arogenate dehydrogenase
- ASA, Ascorbate
- CGS, Cystathionine γ-synthase
- CINV, Cytosolic invertase
- Ci, Intercellular CO2 concentration
- E, Transpiration rate
- GAPDH, Glyceraldehyde-3-phosphate dehydrogenase
- GC-TOF-MS, Gas chromatography time-of-flight mass spectrometry
- GEM, Genome-scale metabolic model
- GLYK, 3-Phosphoglycerate kinase
- GMD, Golm Metabolome Database
- GSH, Glutathione
- GSSG, Glutathione disulfide
- IAA, Indole-3-acetic acid
- IPA, Indolepyruvate
- MAPK, Mitogen-activated protein kinase
- MDH, Malate dehydrogenase
- Metabolic flux analysis
- Metabolic modeling
- Metabolomics
- Multi-omics analysis
- PFK, Phosphofructokinase
- PGK, Phosphoglycerate kinase
- PLS-DA, Partial-Least Squares Discriminant Analysis
- Pn, Net photosynthesis rate
- Rice (Oryza sativa L.)
- SOD, Superoxide dismutase
- Salinity stress
- Systems biology
- TAT, Tyrosine aminotransferase
- Transcriptomics
- gs, Stomatal conductance
- iMAT, Integrative Metabolic Analysis Tool
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Affiliation(s)
- Kwanjeera Wanichthanarak
- Siriraj Metabolomics and Phenomics Center, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand
- Metabolomics and Systems Biology, Department of Biochemistry, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok 10700, Thailand
| | - Chuthamas Boonchai
- Center of Excellence in Environment and Plant Physiology, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
- Future Innovation and Research in Science and Technology, Chulalongkorn University, Bangkok 10330, Thailand
| | - Thammaporn Kojonna
- Center of Excellence in Environment and Plant Physiology, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Supachitra Chadchawan
- Center of Excellence in Environment and Plant Physiology, Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand
| | - Wichian Sangwongchai
- Department of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand
| | - Maysaya Thitisaksakul
- Department of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand
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Abstract
Auxin is an endogenous small molecule with an incredibly large impact on growth and development in plants. Movement of auxin between cells, due to its negative charge at most physiological pHs, strongly relies on families of active transporters. These proteins import auxin from the extracellular space or export it into the same. Mutations in these components have profound impacts on biological processes. Another transport route available to auxin, once the substance is inside the cell, are plasmodesmata connections. These small channels connect the cytoplasms of neighbouring plant cells and enable flow between them. Interestingly, the biological significance of this latter mode of transport is only recently starting to emerge with examples from roots, hypocotyls and leaves. The existence of two transport systems provides opportunities for reciprocal cross-regulation. Indeed, auxin levels influence proteins controlling plasmodesmata permeability, while cell-cell communication affects auxin biosynthesis and transport. In an evolutionary context, transporter driven cell-cell auxin movement and plasmodesmata seem to have evolved around the same time in the green lineage. This highlights a co-existence from early on and a likely functional specificity of the systems. Exploring more situations where auxin movement via plasmodesmata has relevance for plant growth and development, and clarifying the regulation of such transport, will be key aspects in coming years.This article has an associated Future Leader to Watch interview with the author of the paper.
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Affiliation(s)
- Andrea Paterlini
- Sainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge CB2 1 LR, UK
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68
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A Review on Practical Application and Potentials of Phytohormone-Producing Plant Growth-Promoting Rhizobacteria for Inducing Heavy Metal Tolerance in Crops. SUSTAINABILITY 2020. [DOI: 10.3390/su12219056] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Water scarcity and high input costs have compelled farmers to use untreated wastewater and industrial effluents to increase profitability of their farms. Normally, these effluents improve crop productivity by serving as carbon source for microbes, providing nutrients to plants and microbes, and improving soil physicochemical and biological properties. They, however, may also contain significant concentrations of potential heavy metals, the main inorganic pollutants affecting plant systems, in addition to soil deterioration. The continuous use of untreated industrial wastes and agrochemicals may lead to accumulation of phytotoxic concentration of heavy metals in soils. Phytotoxic concentration of heavy metals in soils has been reported in Pakistan along the road sides and around metropolitan areas, which may cause its higher accumulation in edible plant parts. A number of bacterial that can induce heavy metal tolerance in plants due to their ability to produce phytohormones strains have been reported. Inoculation of crop plants with these microbes can help to improve their growth and productivity under normal, as well as stressed, conditions. This review reports the recent developments in heavy metal pollution as one of the major inorganic sources, the response of plants to these contaminants, and heavy metal stress mitigation strategies. We have also summarized the exogenous application of phytohormones and, more importantly, the use of phytohormone-producing, heavy metal-tolerant rhizobacteria as one of the recent tools to deal with heavy metal contamination and improvement in productivity of agricultural systems.
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Molecular Mechanisms Underlying Sugarcane Response to Aluminum Stress by RNA-Seq. Int J Mol Sci 2020; 21:ijms21217934. [PMID: 33114621 PMCID: PMC7672567 DOI: 10.3390/ijms21217934] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 10/06/2020] [Accepted: 10/08/2020] [Indexed: 11/16/2022] Open
Abstract
Some metals are beneficial to plants and contribute to critical physiological processes. Some metals, however, are not. The presence of aluminum ions (Al3+) can be very toxic, especially in acidic soils. Considerable parts of the world's arable land are acidic in nature; mechanistically elucidating a plant's response to aluminum stress is critical to mitigating this stress and improving the quality of plants. To identify the genes involved in sugarcane response to aluminum stress, we generated 372 million paired-end RNA sequencing reads from the roots of CTC-2 and RB855453, which are two contrasting cultivars. Data normalization resulted in 162,161 contigs (contiguous sequences) and 97,335 genes from a de novo transcriptome assembly (trinity genes). A total of 4858 and 1307 differently expressed genes (DEGs) for treatment versus control were identified for the CTC-2 and RB855453 cultivars, respectively. The DEGs were annotated into 34 functional categories. The majority of the genes were upregulated in the CTC-2 (tolerant cultivar) and downregulated in RB855453 (sensitive cultivar). Here, we present the first root transcriptome of sugarcane under aluminum stress. The results and conclusions of this study are a crucial launch pad for future genetic and genomic studies of sugarcane. The transcriptome analysis shows that sugarcane tolerance to aluminum may be explained by an efficient detoxification mechanism combined with lateral root formation and activation of redox enzymes. We also present a hypothetical model for aluminum tolerance in the CTC-2 cultivar.
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70
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Kamarudin ZS, Shamsudin NAA, Othman MHC, Shakri T, Tan LW, Sukiran NL, Isa NM, Rahman ZA, Zainal Z. Morpho-Physiology and Antioxidant Enzyme Activities of Transgenic Rice Plant Overexpressing ABP57 under Reproductive Stage Drought Condition. AGRONOMY 2020; 10:1530. [DOI: 10.3390/agronomy10101530] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
Abstract
MR219 transgenic rice line which overexpressed an auxin-binding protein (ABP57) and its wild-type cultivar, MR219, were screened under well-watered (WW) and drought stress (DS) conditions at the early reproductive stage. This study was conducted with the standard planting distance and under a normal environment to assess the yield advantages based on the field conditions. The aim of this study was to understand the response of these rice genotypes towards DS at morpho-physiological, biochemical, and agronomical levels. It was found that the DS had affected all these levels of the genotypes studied; however, the transgenic plant showed a higher number of tillers, flag leaf area, biomass, relative water content, total chlorophyll content, and antioxidative defense mechanism than the MR219 under DS. Compared to its wild-type, the transgenic plant showed an increased leaf photosynthetic rate by 7% under WW and 11% under DS. The transgenic plant also showed higher yields than MR219 under the WW (10%) and DS (59%). The results propose that drought tolerance is significantly improved in the MR219 transgenic rice line. It may develop a new opportunity for the drought-tolerant rice breeding programme via overexpression of ABP57.
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Demecsová L, Zelinová V, Liptáková Ľ, Valentovičová K, Tamás L. Indole-3-butyric acid priming reduced cadmium toxicity in barley root tip via NO generation and enhanced glutathione peroxidase activity. PLANTA 2020; 252:46. [PMID: 32885283 DOI: 10.1007/s00425-020-03451-w] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Accepted: 08/27/2020] [Indexed: 05/13/2023]
Abstract
Activation of GPX and enhanced NO level play a key role in IBA-mediated enhanced Cd tolerance in young barley roots. Application of exogenous indole-3-acetic acid (IAA) or an IAA precursor improves the tolerance of plants to heavy metals. However, the physiology of these tolerance mechanisms remains largely unknown. Therefore, we studied the priming effect of indole-3-butyric acid (IBA), an IAA precursor, on mild and severe cadmium (Cd) stress-induced responses in roots of young barley seedlings. IBA, similarly to mild Cd stress, significantly increased the glutathione peroxidase (GPX) activity in the apexes of barley roots, which remained elevated after the IBA pretreatment as well. IBA pretreatment-evoked high nitric oxide generation in roots effectively reduced the high superoxide level under the severe Cd stress, leading to less toxic peroxynitrite accumulation accompanied by markedly reduced Cd-induced cell death. On the other hand, the IBA-evoked changes in IAA homeostasis resulted in root growth reorientation from longitudinal elongation to radial swelling. However, the application of an IAA signaling inhibitor, following the activation of defense responses by IBA, was able to promote root growth even at high concentrations of Cd. Based on the results, it can be concluded that the application of IBA, as an effective activator of Cd tolerance mechanisms in young barley roots, and the subsequent use of an IAA signaling inhibitor for the inhibition of root morphogenic responses induced by altered auxin metabolism, results in a high degree of root Cd tolerance, helping it to withstand even the transient exposure to lethal Cd concentration without the absolute inhibition of root growth.
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Affiliation(s)
- Loriana Demecsová
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic
| | - Veronika Zelinová
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic
| | - Ľubica Liptáková
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic
| | - Katarína Valentovičová
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic
| | - Ladislav Tamás
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic.
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Sakarika M, Spanoghe J, Sui Y, Wambacq E, Grunert O, Haesaert G, Spiller M, Vlaeminck SE. Purple non-sulphur bacteria and plant production: benefits for fertilization, stress resistance and the environment. Microb Biotechnol 2020; 13:1336-1365. [PMID: 31432629 PMCID: PMC7415370 DOI: 10.1111/1751-7915.13474] [Citation(s) in RCA: 41] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Revised: 07/23/2019] [Accepted: 07/26/2019] [Indexed: 11/28/2022] Open
Abstract
Purple non-sulphur bacteria (PNSB) are phototrophic microorganisms, which increasingly gain attention in plant production due to their ability to produce and accumulate high-value compounds that are beneficial for plant growth. Remarkable features of PNSB include the accumulation of polyphosphate, the production of pigments and vitamins and the production of plant growth-promoting substances (PGPSs). Scattered case studies on the application of PNSB for plant cultivation have been reported for decades, yet a comprehensive overview is lacking. This review highlights the potential of using PNSB in plant production, with emphasis on three key performance indicators (KPIs): fertilization, resistance to stress (biotic and abiotic) and environmental benefits. PNSB have the potential to enhance plant growth performance, increase the yield and quality of edible plant biomass, boost the resistance to environmental stresses, bioremediate heavy metals and mitigate greenhouse gas emissions. Here, the mechanisms responsible for these attributes are discussed. A distinction is made between the use of living and dead PNSB cells, where critical interpretation of existing literature revealed the better performance of living cells. Finally, this review presents research gaps that remain yet to be elucidated and proposes a roadmap for future research and implementation paving the way for a more sustainable crop production.
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Affiliation(s)
- Myrsini Sakarika
- Research Group of Sustainable Air, Energy and Water TechnologyDepartment of Bioscience EngineeringUniversity of AntwerpGroenenborgerlaan 1712020AntwerpenBelgium
| | - Janne Spanoghe
- Research Group of Sustainable Air, Energy and Water TechnologyDepartment of Bioscience EngineeringUniversity of AntwerpGroenenborgerlaan 1712020AntwerpenBelgium
| | - Yixing Sui
- Research Group of Sustainable Air, Energy and Water TechnologyDepartment of Bioscience EngineeringUniversity of AntwerpGroenenborgerlaan 1712020AntwerpenBelgium
| | - Eva Wambacq
- Department of Plants and CropsFaculty of Bioscience EngineeringGhent UniversityV. Vaerwyckweg 19000GhentBelgium
| | - Oliver Grunert
- Greenyard Horticulture Belgium NVSkaldenstraat 7a9042GentBelgium
| | - Geert Haesaert
- Department of Plants and CropsFaculty of Bioscience EngineeringGhent UniversityV. Vaerwyckweg 19000GhentBelgium
| | - Marc Spiller
- Research Group of Sustainable Air, Energy and Water TechnologyDepartment of Bioscience EngineeringUniversity of AntwerpGroenenborgerlaan 1712020AntwerpenBelgium
| | - Siegfried E. Vlaeminck
- Research Group of Sustainable Air, Energy and Water TechnologyDepartment of Bioscience EngineeringUniversity of AntwerpGroenenborgerlaan 1712020AntwerpenBelgium
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73
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The Phylogeny of Class B Flavoprotein Monooxygenases and the Origin of the YUCCA Protein Family. PLANTS 2020; 9:plants9091092. [PMID: 32854417 PMCID: PMC7570161 DOI: 10.3390/plants9091092] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 08/19/2020] [Accepted: 08/21/2020] [Indexed: 02/07/2023]
Abstract
YUCCA (YUCCA flavin-dependent monooxygenase) is one of the two enzymes of the main auxin biosynthesis pathway (tryptophan aminotransferase enzyme (TAA)/YUCCA) in land plants. The evolutionary origin of the YUCCA family is currently controversial: YUCCAs are assumed to have emerged via a horizontal gene transfer (HGT) from bacteria to the most recent common ancestor (MRCA) of land plants or to have inherited it from their ancestor, the charophyte algae. To refine YUCCA origin, we performed a phylogenetic analysis of the class B flavoprotein monooxygenases and comparative analysis of the sequences belonging to different families of this protein class. We distinguished a new protein family, named type IIb flavin-containing monooxygenases (FMOs), which comprises homologs of YUCCA from Rhodophyta, Chlorophyta, and Charophyta, land plant proteins, and FMO-E, -F, and -G of the bacterium Rhodococcus jostii RHA1. The type IIb FMOs differ considerably in the sites and domain composition from the other families of class B flavoprotein monooxygenases, YUCCAs included. The phylogenetic analysis also demonstrated that the type IIb FMO clade is not a sibling clade of YUCCAs. We have also identified the bacterial protein group named YUC-like FMOs as the closest to YUCCA homologs. Our results support the hypothesis of the emergence of YUCCA via HGT from bacteria to MRCA of land plants.
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Siao W, Coskun D, Baluška F, Kronzucker HJ, Xu W. Root-Apex Proton Fluxes at the Centre of Soil-Stress Acclimation. TRENDS IN PLANT SCIENCE 2020; 25:794-804. [PMID: 32673580 DOI: 10.1016/j.tplants.2020.03.002] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 02/13/2020] [Accepted: 03/04/2020] [Indexed: 05/22/2023]
Abstract
Proton (H+) fluxes in plant roots play critical roles in maintaining root growth and facilitating plant responses to multiple soil stresses, including fluctuations in nutrient supply, salt infiltration, and water stress. Soil mining for nutrients and water, rates of nutrient uptake, and the modulation of cell expansion all depend on the regulation of root H+ fluxes, particularly at the root apex, mediated primarily by the activity of plasma membrane (PM) H+-ATPases. Here, we summarize recent findings on the regulatory mechanisms of H+ fluxes at the root apex under three abiotic stress conditions - phosphate deficiency, salinity stress, and water deficiency - and present an integrated physiomolecular view of the functions of H+ fluxes in maintaining root growth in the acclimation to soil stress.
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Affiliation(s)
- Wei Siao
- Center for Plant Water-Use and Nutrition Regulation and College of Life Sciences, Joint International Research Laboratory of Water and Nutrient in Crop, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Center for Plant Systems Biology, VIB, 9052 Ghent, Belgium
| | - Devrim Coskun
- Département de Phytologie, Faculté des Sciences de l'Agriculture et de l'Alimentation, Université Laval, Québec, QC G1V 0A6, Canada
| | - František Baluška
- Institute of Cellular and Molecular Botany, University of Bonn, 53115 Bonn, Germany
| | - Herbert J Kronzucker
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, VIC 3010, Australia; Faculty of Land and Food Systems, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.
| | - Weifeng Xu
- Center for Plant Water-Use and Nutrition Regulation and College of Life Sciences, Joint International Research Laboratory of Water and Nutrient in Crop, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.
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Rocks in the auxin stream: Wound-induced auxin accumulation and ERF115 expression synergistically drive stem cell regeneration. Proc Natl Acad Sci U S A 2020; 117:16667-16677. [PMID: 32601177 DOI: 10.1073/pnas.2006620117] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Plants are known for their outstanding capacity to recover from various wounds and injuries. However, it remains largely unknown how plants sense diverse forms of injury and canalize existing developmental processes into the execution of a correct regenerative response. Auxin, a cardinal plant hormone with morphogen-like properties, has been previously implicated in the recovery from diverse types of wounding and organ loss. Here, through a combination of cellular imaging and in silico modeling, we demonstrate that vascular stem cell death obstructs the polar auxin flux, much alike rocks in a stream, and causes it to accumulate in the endodermis. This in turn grants the endodermal cells the capacity to undergo periclinal cell division to repopulate the vascular stem cell pool. Replenishment of the vasculature by the endodermis depends on the transcription factor ERF115, a wound-inducible regulator of stem cell division. Although not the primary inducer, auxin is required to maintain ERF115 expression. Conversely, ERF115 sensitizes cells to auxin by activating ARF5/MONOPTEROS, an auxin-responsive transcription factor involved in the global auxin response, tissue patterning, and organ formation. Together, the wound-induced auxin accumulation and ERF115 expression grant the endodermal cells stem cell activity. Our work provides a mechanistic model for wound-induced stem cell regeneration in which ERF115 acts as a wound-inducible stem cell organizer that interprets wound-induced auxin maxima.
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Ribba T, Garrido-Vargas F, O'Brien JA. Auxin-mediated responses under salt stress: from developmental regulation to biotechnological applications. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:3843-3853. [PMID: 32433743 DOI: 10.1093/jxb/eraa241] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Accepted: 05/18/2020] [Indexed: 05/10/2023]
Abstract
As sessile organisms, plants are exposed to multiple abiotic stresses commonly found in nature. To survive, plants have developed complex responses that involve genetic, epigenetic, cellular, and morphological modifications. Among different environmental cues, salt stress has emerged as a critical problem contributing to yield losses and marked reductions in crop production. Moreover, as the climate changes, it is expected that salt stress will have a significant impact on crop production in the agroindustry. On a mechanistic level, salt stress is known to be regulated by the crosstalk of many signaling molecules such as phytohormones, with auxin having been described as a key mediator of the process. Auxin plays an important role in plant developmental responses and stress, modulating a complex balance of biosynthesis, transport, and signaling that among other things, finely tune physiological changes in plant architecture and Na+ accumulation. In this review, we describe current knowledge on auxin's role in modulating the salt stress response. We also discuss recent and potential biotechnological approaches to tackling salt stress.
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Affiliation(s)
- Tomas Ribba
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas and Departamento de Fruticultura y Enología, Facultad de Agronomía e Ingeniería Forestal. Pontificia Universidad Católica de Chile, Avenida Libertador Bernardo O'Higgins, Santiago, Chile
| | - Fernanda Garrido-Vargas
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas and Departamento de Fruticultura y Enología, Facultad de Agronomía e Ingeniería Forestal. Pontificia Universidad Católica de Chile, Avenida Libertador Bernardo O'Higgins, Santiago, Chile
| | - José Antonio O'Brien
- Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas and Departamento de Fruticultura y Enología, Facultad de Agronomía e Ingeniería Forestal. Pontificia Universidad Católica de Chile, Avenida Libertador Bernardo O'Higgins, Santiago, Chile
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Zhang Y, Wang X, Luo Y, Zhang L, Yao Y, Han L, Chen Z, Wang L, Li Y. OsABA8ox2, an ABA catabolic gene, suppresses root elongation of rice seedlings and contributes to drought response. ACTA ACUST UNITED AC 2020. [DOI: 10.1016/j.cj.2019.08.006] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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78
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Zhao X, Bai S, Li L, Han X, Li J, Zhu Y, Fang Y, Zhang D, Li S. Comparative Transcriptome Analysis of Two Aegilops tauschii with Contrasting Drought Tolerance by RNA-Seq. Int J Mol Sci 2020; 21:ijms21103595. [PMID: 32438769 PMCID: PMC7279474 DOI: 10.3390/ijms21103595] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 05/13/2020] [Accepted: 05/16/2020] [Indexed: 01/03/2023] Open
Abstract
As the diploid progenitor of common wheat, Aegilops tauschii is considered to be a valuable resistance source to various biotic and abiotic stresses. However, little has been reported concerning the molecular mechanism of drought tolerance in Ae. tauschii. In this work, the drought tolerance of 155 Ae. tauschii accessions was firstly screened on the basis of their coleoptile lengths under simulated drought stress. Subsequently, two accessions (XJ002 and XJ098) with contrasting coleoptile lengths were selected and intensively analyzed on rate of water loss (RWL) as well as physiological characters, confirming the difference in drought tolerance at the seedling stage. Further, RNA-seq was utilized for global transcriptome profiling of the two accessions seedling leaves under drought stress conditions. A total of 6969 differentially expressed genes (DEGs) associated with drought tolerance were identified, and their functional annotations demonstrated that the stress response was mediated by pathways involving alpha-linolenic acid metabolism, starch and sucrose metabolism, peroxisome, mitogen-activated protein kinase (MAPK) signaling, carbon fixation in photosynthetic organisms, and glycerophospholipid metabolism. In addition, DEGs with obvious differences between the two accessions were intensively analyzed, indicating that the expression level of DEGs was basically in alignment with the physiological changes of Ae. tauschii under drought stress. The results not only shed fundamental light on the regulatory process of drought tolerance in Ae. tauschii, but also provide a new gene resource for improving the drought tolerance of common wheat.
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Affiliation(s)
- Xinpeng Zhao
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
| | - Shenglong Bai
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
| | - Lechen Li
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
| | - Xue Han
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
| | - Jiahui Li
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
| | - Yumeng Zhu
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
| | - Yuan Fang
- College of Agriculture, Nanjing Agricultural University, Nanjing 210095, China;
| | - Dale Zhang
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
- Correspondence:
| | - Suoping Li
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng 475001, China; (X.Z.); (S.B.); (L.L.); (X.H.); (J.L.); (Y.Z.); (S.L.)
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79
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Aybeke M. Aspergillus alliaceus infection fatally shifts Orobanche hormones and phenolic metabolism. Braz J Microbiol 2020; 51:883-892. [PMID: 32363566 DOI: 10.1007/s42770-020-00283-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Accepted: 04/17/2020] [Indexed: 10/24/2022] Open
Abstract
In this study, the physio pathological effects of Aspergillus alliaceus (Aa, fungi, biocontrol agent) on Orobanche (parasitic plant) were investigated by hormone and phenolic substance tests. In experimental group, Orobanches were treated with the fungi, considering control group was fungus-free. Based on the hormonal tests, in the experimental group, salicylic acid (SA), jasmonic acid (JA), abscisic acid (ABA) and gibberellic acid (GA) levels significantly decreased, and only indole acetic acid (IAA) hormone levels were fairly higher than the control group. According to phenolic substance tests, it was found that only gallic acid, syringic acid and caffeic acid values significantly increased compared with control, and catechin and p-coumaric acid values were significantly lower. Consequently, it was determined that Aa pathogenesis (1) considerably reduces the effects of all defence hormones (JA, ABA, SA), (2) operates an inadequate defence based solely on the IAA hormone and several phenolic substances (gallic acid, syringic acid and caffeic acid), (3) and inevitably the fungi lead the Orobanche to a slow and continuous death. The results were evaluated in detail in the light of similar recent article and current literature in terms of biocontrol and pathology.
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Affiliation(s)
- Mehmet Aybeke
- Faculty of Science, Department of Biology, Balkan Campus, Trakya University, 22030, Edirne, Turkey.
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80
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Jiang W, Yin J, Zhang H, He Y, Shuai S, Chen S, Cao S, Li W, Ma D, Chen H. Genome-wide identification, characterization analysis and expression profiling of auxin-responsive GH3 family genes in wheat (Triticum aestivum L.). Mol Biol Rep 2020; 47:3885-3907. [DOI: 10.1007/s11033-020-05477-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Accepted: 04/25/2020] [Indexed: 12/15/2022]
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81
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Cao J, Li R, Liang S, Li J, Xu Q, Wang C. Simultaneous extraction of four plant growth regulators residues in vegetable samples using solid phase extraction based on thiol-functionalized nanofibers mat. Food Chem 2020; 310:125859. [DOI: 10.1016/j.foodchem.2019.125859] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Revised: 11/03/2019] [Accepted: 11/03/2019] [Indexed: 01/05/2023]
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82
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Mellor NL, Voß U, Janes G, Bennett MJ, Wells DM, Band LR. Auxin fluxes through plasmodesmata modify root-tip auxin distribution. Development 2020; 147:dev181669. [PMID: 32229613 PMCID: PMC7132777 DOI: 10.1242/dev.181669] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2019] [Accepted: 02/17/2020] [Indexed: 01/05/2023]
Abstract
Auxin is a key signal regulating plant growth and development. It is well established that auxin dynamics depend on the spatial distribution of efflux and influx carriers on the cell membranes. In this study, we employ a systems approach to characterise an alternative symplastic pathway for auxin mobilisation via plasmodesmata, which function as intercellular pores linking the cytoplasm of adjacent cells. To investigate the role of plasmodesmata in auxin patterning, we developed a multicellular model of the Arabidopsis root tip. We tested the model predictions using the DII-VENUS auxin response reporter, comparing the predicted and observed DII-VENUS distributions using genetic and chemical perturbations designed to affect both carrier-mediated and plasmodesmatal auxin fluxes. The model revealed that carrier-mediated transport alone cannot explain the experimentally determined auxin distribution in the root tip. In contrast, a composite model that incorporates both carrier-mediated and plasmodesmatal auxin fluxes re-capitulates the root-tip auxin distribution. We found that auxin fluxes through plasmodesmata enable auxin reflux and increase total root-tip auxin. We conclude that auxin fluxes through plasmodesmata modify the auxin distribution created by efflux and influx carriers.
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Affiliation(s)
- Nathan L Mellor
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK
| | - Ute Voß
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK
| | - George Janes
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK
| | - Malcolm J Bennett
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK
| | - Darren M Wells
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK
| | - Leah R Band
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough LE12 5RD, UK
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham NG7 2RD, UK
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83
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López-Salmerón V, Cho H, Tonn N, Greb T. The Phloem as a Mediator of Plant Growth Plasticity. Curr Biol 2020; 29:R173-R181. [PMID: 30836090 DOI: 10.1016/j.cub.2019.01.015] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Developmental plasticity, defined as the capacity to respond to changing environmental conditions, is an inherent feature of plant growth. Recent studies have brought the phloem tissue, the quintessential conduit for energy metabolites and inter-organ communication, into focus as an instructive developmental system. Those studies have clarified long-standing questions about essential aspects of phloem development and function, such as the pressure flow hypothesis, mechanisms of phloem unloading, and source-sink relationships. Interestingly, plants with impaired phloem development show characteristic changes in body architecture, thereby highlighting the capacity of the phloem to integrate environmental cues and to fine-tune plant development. Therefore, understanding the plasticity of phloem development provides scenarios of how environmental stimuli are translated into differential plant growth. In this Review, we summarize novel insights into how phloem identity is established and how phloem cells fulfil their core function as transport units. Moreover, we discuss possible interfaces between phloem physiology and development as sites for mediating the plastic growth mode of plants.
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Affiliation(s)
- Vadir López-Salmerón
- Centre for Organismal Studies (COS), Heidelberg University, Im Neuenheimer Feld 230, 69120 Heidelberg, Germany
| | - Hyunwoo Cho
- Centre for Organismal Studies (COS), Heidelberg University, Im Neuenheimer Feld 230, 69120 Heidelberg, Germany
| | - Nina Tonn
- Centre for Organismal Studies (COS), Heidelberg University, Im Neuenheimer Feld 230, 69120 Heidelberg, Germany
| | - Thomas Greb
- Centre for Organismal Studies (COS), Heidelberg University, Im Neuenheimer Feld 230, 69120 Heidelberg, Germany.
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84
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Zhou J, Cheng K, Huang G, Chen G, Zhou S, Huang Y, Zhang J, Duan H, Fan H. Effects of exogenous 3-indoleacetic acid and cadmium stress on the physiological and biochemical characteristics of Cinnamomum camphora. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 191:109998. [PMID: 31796252 DOI: 10.1016/j.ecoenv.2019.109998] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2019] [Revised: 11/13/2019] [Accepted: 11/22/2019] [Indexed: 05/22/2023]
Abstract
Indoleacetic acid (IAA) is a plant growth regulator that plays an important role in plant growth and development, and participates in the regulation of abiotic stress. To explore the effect of IAA on cadmium toxicity in Cinnamomum camphora, an indoor potted experiment was conducted with one-year-old C. camphora seedlings. The influence of IAA on cadmium accumulation, net photosynthetic rates, respiration, photosynthetic pigments (chlorophyll a, chlorophyll b, total chlorophyll and carotenoids), osmoregulatory substances (proline, soluble sugar and soluble protein) and the malondialdehyde content in C. camphora leaves treated with 30 mg kg-1 cadmium was analysed with or without the addition of 10 mg kg-1 IAA. Cadmium accumulation in the leaves of C. camphora with the addition of exogenous IAA was significantly higher than accumulation during cadmium stress without additional IAA (ca 69.10% after 60 days' incubation). During the culture period, the net photosynthetic rate in C. camphora leaves subjected to cadmium stress without the addition of IAA was up to 24.31% lower than that of control plants. The net photosynthetic rate in C. camphora leaves subjected to cadmium stress and addition of IAA was up to 30.31% higher than that of leaves subjected to cadmium stress without the addition of IAA. Chlorophyll a, total chlorophyll and carotenoid contents in the cadmium-stressed leaves without the addition of IAA were lower than those in the control treatment. The presence of IAA increased the chlorophyll a, total chlorophyll and carotenoid contents relative to the cadmium stress without the addition of IAA. The respiration rate and concentrations of proline, soluble sugar, soluble protein and malondialdehyde in C. camphora leaves subjected to cadmium stress without the addition of IAA were higher than those in the control. The addition of IAA reduced the respiration rate, and the concentrations of proline, soluble sugar, soluble protein and malondialdehyde in C. camphora leaves when compared with the cadmium stress without the addition of IAA. These results indicate that exogenous IAA improves photosynthetic performance and the growth environment of C. camphora by enhancing the net photosynthetic rate, increasing concentrations of osmoregulatory substances, removing reactive oxygen radicals and eliminating potential damage, thereby reducing the toxic effects of cadmium on C. camphora.
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Affiliation(s)
- Jihai Zhou
- Anhui Provincial Key Laboratory for the Conservation and Utilization of Important Biological Resources, College of Life Sciences, Anhui Normal University, Wuhu, 241000, China; Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang, 330099, China; Research Institute of Subtropical Forestry, Key Laboratory of Tree Breeding of Zhejiang Province, Hangzhou, 311400, China.
| | - Kun Cheng
- Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang, 330099, China
| | - Guomin Huang
- Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang, 330099, China
| | - Guangcai Chen
- Research Institute of Subtropical Forestry, Key Laboratory of Tree Breeding of Zhejiang Province, Hangzhou, 311400, China
| | - Shoubiao Zhou
- Anhui Provincial Key Laboratory for the Conservation and Utilization of Important Biological Resources, College of Life Sciences, Anhui Normal University, Wuhu, 241000, China.
| | - Yongjie Huang
- Anhui Provincial Key Laboratory for the Conservation and Utilization of Important Biological Resources, College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
| | - Jie Zhang
- Anhui Provincial Key Laboratory for the Conservation and Utilization of Important Biological Resources, College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
| | - Honglang Duan
- Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang, 330099, China
| | - Houbao Fan
- Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang, 330099, China
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85
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Chen L, Long C, Wang D, Yang J. Phytoremediation of cadmium (Cd) and uranium (U) contaminated soils by Brassica juncea L. enhanced with exogenous application of plant growth regulators. CHEMOSPHERE 2020; 242:125112. [PMID: 31669993 DOI: 10.1016/j.chemosphere.2019.125112] [Citation(s) in RCA: 84] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Revised: 10/03/2019] [Accepted: 10/12/2019] [Indexed: 05/20/2023]
Abstract
This investigation was made to examine the role of indole-3-acetic acid (IAA), gibberellin A3 (GA3), 6-Benzylaminopurine (6-BA), and 24-epibrassinolide (EBL) in improving stress tolerance and phytoremediation of the cadmium (Cd) and uranium (U) by mustard (Brassica juncea L.). The optimum concentrations of IAA, GA3, 6-BA, and EBL were determined based on plant biomass production, metal uptake, translocation, and removal efficiency. The biomass and total chlorophyll content decreased under Cd and U stress. Nevertheless, the application of IAA, GA3, and 6-BA significantly (p < 0.05) increased the growth and total chlorophyll content of mustard. The malondialdehyde (MDA) and H2O2 content of mustard were enhanced under Cd and U stress, but they were significantly (p < 0.05) decreased in plant growth regulators (PGRs) treatments (except for EBL). PGRs treatments increased activities of antioxidant enzymes such as superoxide dismutase, peroxidase, catalase, and ascorbate peroxidase, thus reducing the oxidative stress. Furthermore, the shoot uptake of Cd and U of IAA and EBL treatments was significantly (p < 0.05) higher than that of other treatments. IAA and EBL also have more significant effects on the translocation and remediation of Cd and U compared to GA3 and 6-BA. The removal efficiency of Cd and U reached the maximum in the 500 mg L-1 IAA treatment, which was 330.77% and 118.61% greater than that in the control (CK), respectively. These results suggested that PGRs could improve the stress tolerance and efficiency of phytoremediation using B. juncea in Cd- and U- contaminated soils.
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Affiliation(s)
- Li Chen
- College of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, Sichuan, PR China; College of Architecture and Environment, Sichuan University, Chengdu, 610065, Sichuan, PR China.
| | - Chan Long
- College of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, Sichuan, PR China.
| | - Dan Wang
- College of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, Sichuan, PR China.
| | - Jinyan Yang
- College of Architecture and Environment, Sichuan University, Chengdu, 610065, Sichuan, PR China.
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86
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A phosphorylation-based switch controls TAA1-mediated auxin biosynthesis in plants. Nat Commun 2020; 11:679. [PMID: 32015349 PMCID: PMC6997161 DOI: 10.1038/s41467-020-14395-w] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2019] [Accepted: 01/06/2020] [Indexed: 12/31/2022] Open
Abstract
Auxin determines the developmental fate of plant tissues, and local auxin concentration is precisely controlled. The role of auxin transport in modulating local auxin concentration has been widely studied but the regulation of local auxin biosynthesis is less well understood. Here, we show that TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS (TAA1), a key enzyme in the auxin biosynthesis pathway in Arabidopsis thaliana is phosphorylated at Threonine 101 (T101). T101 phosphorylation status can act as an on/off switch to control TAA1-dependent auxin biosynthesis and is required for proper regulation of root meristem size and root hair development. This phosphosite is evolutionarily conserved suggesting post-translational regulation of auxin biosynthesis may be a general phenomenon. In addition, we show that auxin itself, in part via TRANS-MEMBRANE KINASE 4 (TMK4), can induce T101 phosphorylation of TAA1 suggesting a self-regulatory loop whereby local auxin signalling can suppress biosynthesis. We conclude that phosphorylation-dependent control of TAA1 enzymatic activity may contribute to regulation of auxin concentration in response to endogenous and/or external cues. Precise regulation of auxin concentration via transport and metabolism determines the developmental fate of plant tissues. Here the authors show that local auxin biosynthesis is regulated by TMK4-dependent phosphorylation of the TAA1 enzyme and that this is required for proper root development.
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87
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Sun X, Wang N, Li P, Jiang Z, Liu X, Wang M, Su Z, Zhang C, Lin F, Liang Y. Endophytic fungus Falciphora oryzae promotes lateral root growth by producing indole derivatives after sensing plant signals. PLANT, CELL & ENVIRONMENT 2020; 43:358-373. [PMID: 31675439 DOI: 10.1111/pce.13667] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2019] [Revised: 10/09/2019] [Accepted: 10/13/2019] [Indexed: 06/10/2023]
Abstract
The endophytic fungus Falciphora oryzae was initially isolated from wild rice (Oryza granulata) and colonizes many crop species and promotes plant growth. However, the molecular mechanisms underlying F. oryzae-mediated growth promotion are still unknown. We found that F. oryzae was able to colonize Arabidopsis thaliana. The most dramatic change after F. oryzae inoculation was observed in the root architecture, as evidenced by increased lateral root growth but reduced primary root length, similar to the effect of auxin, a significant plant growth hormone. The expression of genes responsible for auxin biosynthesis, transport, and signalling was regulated in Arabidopsis roots after F. oryzae cocultivation. Indole derivatives were detected at significantly higher levels in liquid media after cocultivation compared with separate cultivation of Arabidopsis and F. oryzae. Consistently, the expression of indole biosynthetic genes was highly upregulated in F. oryzae upon treatment with Arabidopsis exudates. Global analysis of Arabidopsis gene expression at the early stage after F. oryzae cocultivation suggested that signals were exchanged to initiate Arabidopsis-F. oryzae interactions. All these results suggest that signalling molecules from Arabidopsis roots are perceived by F. oryzae and induce the biosynthesis of indole derivatives in F. oryzae, consequently stimulating Arabidopsis lateral root growth.
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Affiliation(s)
- Xun Sun
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Ning Wang
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Ping Li
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Zhiyan Jiang
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Xiaoyu Liu
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Institute of Pesticide and Environmental Toxicology, Zhejiang University, Hangzhou, 310058, China
| | - Mengcen Wang
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, Institute of Pesticide and Environmental Toxicology, Zhejiang University, Hangzhou, 310058, China
| | - Zhenzhu Su
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Chulong Zhang
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Fucheng Lin
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
| | - Yan Liang
- Ministry of Agriculture Key Laboratory of Molecular Biology of Crop Pathogens and Insects, State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, 310058, China
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88
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Li Y, Wang Y, Tan S, Li Z, Yuan Z, Glanc M, Domjan D, Wang K, Xuan W, Guo Y, Gong Z, Friml J, Zhang J. Root Growth Adaptation is Mediated by PYLs ABA Receptor-PP2A Protein Phosphatase Complex. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2020; 7:1901455. [PMID: 32042554 PMCID: PMC7001640 DOI: 10.1002/advs.201901455] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Revised: 10/23/2019] [Indexed: 05/20/2023]
Abstract
Plant root architecture dynamically adapts to various environmental conditions, such as salt-containing soil. The phytohormone abscisic acid (ABA) is involved among others also in these developmental adaptations, but the underlying molecular mechanism remains elusive. Here, a novel branch of the ABA signaling pathway in Arabidopsis involving PYR/PYL/RCAR (abbreviated as PYLs) receptor-protein phosphatase 2A (PP2A) complex that acts in parallel to the canonical PYLs-protein phosphatase 2C (PP2C) mechanism is identified. The PYLs-PP2A signaling modulates root gravitropism and lateral root formation through regulating phytohormone auxin transport. In optimal conditions, PYLs ABA receptor interacts with the catalytic subunits of PP2A, increasing their phosphatase activity and thus counteracting PINOID (PID) kinase-mediated phosphorylation of PIN-FORMED (PIN) auxin transporters. By contrast, in salt and osmotic stress conditions, ABA binds to PYLs, inhibiting the PP2A activity, which leads to increased PIN phosphorylation and consequently modulated directional auxin transport leading to adapted root architecture. This work reveals an adaptive mechanism that may flexibly adjust plant root growth to withstand saline and osmotic stresses. It occurs via the cross-talk between the stress hormone ABA and the versatile developmental regulator auxin.
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Affiliation(s)
- Yang Li
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Yaping Wang
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Shutang Tan
- Institute of Science and Technology AustriaAm Campus 13400KlosterneuburgAustria
| | - Zhen Li
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Zhi Yuan
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Matouš Glanc
- Institute of Science and Technology AustriaAm Campus 13400KlosterneuburgAustria
| | - David Domjan
- Institute of Science and Technology AustriaAm Campus 13400KlosterneuburgAustria
| | - Kai Wang
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Wei Xuan
- State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower‐Middle Reaches of the Yangtze RiverNanjing Agricultural UniversityNanjing210095China
| | - Yan Guo
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Zhizhong Gong
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
| | - Jiří Friml
- Institute of Science and Technology AustriaAm Campus 13400KlosterneuburgAustria
| | - Jing Zhang
- State Key Laboratory of Plant Physiology and BiochemistryCollege of Biological SciencesChina Agricultural UniversityBeijing100193China
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89
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Sharma A, Kapoor D, Wang J, Shahzad B, Kumar V, Bali AS, Jasrotia S, Zheng B, Yuan H, Yan D. Chromium Bioaccumulation and Its Impacts on Plants: An Overview. PLANTS (BASEL, SWITZERLAND) 2020; 9:E100. [PMID: 31941115 PMCID: PMC7020214 DOI: 10.3390/plants9010100] [Citation(s) in RCA: 128] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 01/07/2020] [Accepted: 01/09/2020] [Indexed: 02/07/2023]
Abstract
Chromium (Cr) is an element naturally occurring in rocky soils and volcanic dust. It has been classified as a carcinogen agent according to the International Agency for Research on Cancer. Therefore, this metal needs an accurate understanding and thorough investigation in soil-plant systems. Due to its high solubility, Cr (VI) is regarded as a hazardous ion, which contaminates groundwater and can be transferred through the food chain. Cr also negatively impacts the growth of plants by impairing their essential metabolic processes. The toxic effects of Cr are correlated with the generation of reactive oxygen species (ROS), which cause oxidative stress in plants. The current review summarizes the understanding of Cr toxicity in plants via discussing the possible mechanisms involved in its uptake, translocation and sub-cellular distribution, along with its interference with the other plant metabolic processes such as chlorophyll biosynthesis, photosynthesis and plant defensive system.
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Affiliation(s)
- Anket Sharma
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China
| | - Dhriti Kapoor
- School of Bioengineering & Biosciences, Lovely Professional University, Punjab 144411, India
| | - Junfeng Wang
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China
| | - Babar Shahzad
- School of Land and Food, University of Tasmania, Hobart, Tasmania 7005, Australia
| | - Vinod Kumar
- State Higher Education Department, Jammu and Kashmir 180001, India
| | | | - Shivam Jasrotia
- Department of Zoology, Guru Nanak Dev University, Amritsar 143005, India
| | - Bingsong Zheng
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China
| | - Huwei Yuan
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China
| | - Daoliang Yan
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou 311300, China
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90
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Gupta A, Sinha R, Fernandes JL, Abdelrahman M, Burritt DJ, Tran LSP. Phytohormones regulate convergent and divergent responses between individual and combined drought and pathogen infection. Crit Rev Biotechnol 2020; 40:320-340. [DOI: 10.1080/07388551.2019.1710459] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Aarti Gupta
- Institute of Plant Genetics, Polish Academy of Sciences, Poznan, Poland
| | | | - Joel Lars Fernandes
- Department of Plant Molecular Biology, University of Delhi South Campus, New Delhi, India
| | - Mostafa Abdelrahman
- Arid Land Research Center, Tottori University, Tottori, Japan
- Botany Department, Faculty of Science, Aswan University, Aswan, Egypt
| | | | - Lam-Son Phan Tran
- Plant Stress Research Group, Ton Duc Thang University, Ho Chi Minh City, Vietnam
- Faculty of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City, Vietnam
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91
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Fungal Phytohormones: Plant Growth-Regulating Substances and Their Applications in Crop Productivity. Fungal Biol 2020. [DOI: 10.1007/978-3-030-45971-0_7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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92
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Safdar LB, Andleeb T, Latif S, Umer MJ, Tang M, Li X, Liu S, Quraishi UM. Genome-Wide Association Study and QTL Meta-Analysis Identified Novel Genomic Loci Controlling Potassium Use Efficiency and Agronomic Traits in Bread Wheat. FRONTIERS IN PLANT SCIENCE 2020; 11:70. [PMID: 32133017 PMCID: PMC7041172 DOI: 10.3389/fpls.2020.00070] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Accepted: 01/17/2020] [Indexed: 05/21/2023]
Abstract
Potassium use efficiency, a complex trait, directly impacts the yield potential of crop plants. Low potassium efficiency leads to a high use of fertilizers, which is not only farmer unfriendly but also deteriorates the environment. Genome-wide association studies (GWAS) are widely used to dissect complex traits. However, most studies use single-locus one-dimensional GWAS models which do not provide true information about complex traits that are controlled by multiple loci. Here, both single-locus GWAS (MLM) and multi-locus GWAS (pLARmEB, FASTmrMLM, mrMLM, FASTmrEMMA) models were used with genotyping from 90 K Infinium SNP array and phenotype derived from four normal and potassium-stress environments, which identified 534 significant marker-trait associations (MTA) for agronomic and potassium related traits: pLARmEB = 279, FASTmrMLM = 213, mrMLM = 35, MLM = 6, FASTmrEMMA = 1. Further screening of these MTA led to the detection of eleven stable loci: q1A, q1D, q2B-1, q2B-2, q2D, q4D, q5B-1, q5B-2, q5B-3, q6D, and q7A. Moreover, Meta-QTL (MQTL) analysis of four independent QTL studies for potassium deficiency in bread wheat located 16 MQTL on 13 chromosomes. One locus identified in this study (q5B-1) colocalized with an MQTL (MQTL_11 ), while the other ten loci were novel associations. Gene ontology of these loci identified 20 putative candidate genes encoding functional proteins involved in key pathways related to stress tolerance, sugar metabolism, and nutrient transport. These findings provide potential targets for breeding potassium stress resistant wheat cultivars and advocate the advantages of multi-locus GWAS models for studying complex traits.
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Affiliation(s)
- Luqman Bin Safdar
- Key Laboratory of Biology and Genetics Improvement of Oil Crops, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan, China
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Tayyaba Andleeb
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Sadia Latif
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan
| | - Muhammad Jawad Umer
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China
| | - Minqiang Tang
- Key Laboratory of Biology and Genetics Improvement of Oil Crops, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Xiang Li
- Key Laboratory of Biology and Genetics Improvement of Oil Crops, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Shengyi Liu
- Key Laboratory of Biology and Genetics Improvement of Oil Crops, Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Ministry of Agriculture and Rural Affairs, Wuhan, China
- *Correspondence: Shengyi Liu, ; Umar Masood Quraishi,
| | - Umar Masood Quraishi
- Department of Plant Sciences, Quaid-i-Azam University, Islamabad, Pakistan
- *Correspondence: Shengyi Liu, ; Umar Masood Quraishi,
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93
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Jia KP, Dickinson AJ, Mi J, Cui G, Xiao TT, Kharbatia NM, Guo X, Sugiono E, Aranda M, Blilou I, Rueping M, Benfey PN, Al-Babili S. Anchorene is a carotenoid-derived regulatory metabolite required for anchor root formation in Arabidopsis. SCIENCE ADVANCES 2019; 5:eaaw6787. [PMID: 31807696 PMCID: PMC6881154 DOI: 10.1126/sciadv.aaw6787] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Accepted: 09/25/2019] [Indexed: 05/09/2023]
Abstract
Anchor roots (ANRs) arise at the root-shoot junction and are the least investigated type of Arabidopsis root. Here, we show that ANRs originate from pericycle cells in an auxin-dependent manner and a carotenogenic signal to emerge. By screening known and assumed carotenoid derivatives, we identified anchorene, a presumed carotenoid-derived dialdehyde (diapocarotenoid), as the specific signal needed for ANR formation. We demonstrate that anchorene is an Arabidopsis metabolite and that its exogenous application rescues the ANR phenotype in carotenoid-deficient plants and promotes the growth of normal seedlings. Nitrogen deficiency resulted in enhanced anchorene content and an increased number of ANRs, suggesting a role of this nutrient in determining anchorene content and ANR formation. Transcriptome analysis and treatment of auxin reporter lines indicate that anchorene triggers ANR formation by modulating auxin homeostasis. Together, our work reveals a growth regulator with potential application to agriculture and a new carotenoid-derived signaling molecule.
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Affiliation(s)
- Kun-Peng Jia
- King Abdullah University of Science and Technology (KAUST), Biological and Environmental Sciences and Engineering Division, The BioActives Lab, Thuwal 23955-6900, Saudi Arabia
| | - Alexandra J. Dickinson
- Department of Biology and Howard Hughes Medical Institute, Duke University, Durham, NC 27708, USA
| | - Jianing Mi
- King Abdullah University of Science and Technology (KAUST), Biological and Environmental Sciences and Engineering Division, The BioActives Lab, Thuwal 23955-6900, Saudi Arabia
| | - Guoxin Cui
- King Abdullah University of Science and Technology (KAUST), Biological and Environmental Science and Engineering Division, Red Sea Research Center, Thuwal 23955-6900, Saudi Arabia
| | - Ting Ting Xiao
- King Abdullah University of Science and Technology, Division of Biological and Environmental Sciences and Engineering, Thuwal 23955-6900, Saudi Arabia
| | - Najeh M. Kharbatia
- King Abdullah University of Science and Technology (KAUST), Core Lab, Thuwal 23955-6900, Saudi Arabia
| | - Xiujie Guo
- King Abdullah University of Science and Technology (KAUST), Biological and Environmental Sciences and Engineering Division, The BioActives Lab, Thuwal 23955-6900, Saudi Arabia
| | - Erli Sugiono
- RWTH Aachen University, Institute of Organic Chemistry, 52074 Aachen, Germany
| | - Manuel Aranda
- King Abdullah University of Science and Technology (KAUST), Biological and Environmental Science and Engineering Division, Red Sea Research Center, Thuwal 23955-6900, Saudi Arabia
| | - Ikram Blilou
- King Abdullah University of Science and Technology, Division of Biological and Environmental Sciences and Engineering, Thuwal 23955-6900, Saudi Arabia
| | - Magnus Rueping
- King Abdullah University of Science and Technology (KAUST), Physical Science and Engineering Division, KAUST Catalysis Center, Thuwal 23955-6900, Saudi Arabia
| | - Philip N. Benfey
- Department of Biology and Howard Hughes Medical Institute, Duke University, Durham, NC 27708, USA
| | - Salim Al-Babili
- King Abdullah University of Science and Technology (KAUST), Biological and Environmental Sciences and Engineering Division, The BioActives Lab, Thuwal 23955-6900, Saudi Arabia
- Corresponding author.
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94
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Demecsová L, Tamás L. Reactive oxygen species, auxin and nitric oxide in metal-stressed roots: toxicity or defence. Biometals 2019; 32:717-744. [PMID: 31541378 DOI: 10.1007/s10534-019-00214-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Accepted: 08/29/2019] [Indexed: 10/25/2022]
Abstract
The presented review is a summary on the current knowledge about metal induced stress response in plants, focusing on the roles of reactive oxygen species, auxin and nitric oxide in roots. The article focuses mainly on the difference between defence and toxicity symptoms of roots during metal-induced stress. Nowadays, pollution of soils by heavy metals is a rapidly growing issue, which affects agriculture and human health. In order to deal with these problems, we must first understand the basic mechanisms and responses to environmental conditions in plants growing under such conditions. Studies so far show somewhat conflicting data, interpreting the same stress responses as both symptoms of defence and toxicity. Therefore, the aim of this review is to give a report about current knowledge of heavy metal-induced stress research, and also to differentiate between toxicity and defence, and outline the challenges of research, focusing on reactive oxygen and nitrogen species, auxin, and the interplay among them. There are still remaining questions on how reactive oxygen and nitrogen species, as well as auxin, can activate either symptoms of toxicity or defence, and adaptation responses.
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Affiliation(s)
- Loriana Demecsová
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic
| | - Ladislav Tamás
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dúbravská cesta 9, 84523, Bratislava, Slovak Republic.
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95
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A comprehensive analysis of the B3 superfamily identifies tissue-specific and stress-responsive genes in chickpea ( Cicer arietinum L.). 3 Biotech 2019; 9:346. [PMID: 31497464 DOI: 10.1007/s13205-019-1875-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Accepted: 08/14/2019] [Indexed: 12/31/2022] Open
Abstract
The aim of this study was to provide a comprehensive analysis of the plant-specific B3 domain-containing transcription factors (TFs) in chickpea. Scanning of the chickpea genome resulted in the identification of 51 B3 domain-containing TFs that were located on seven out of eight chickpea chromosomes. Based on the presence of additional domains other than the B3 domain, the candidates were classified into four subfamilies, i.e., ARF (24), REM (19), LAV (6) and RAV (2). Phylogenetic analysis classified them into four groups in which members of the same group had similar intron-exon organization and motif composition. Genome duplication analysis of the candidate B3 genes revealed an event of segmental duplication that was instrumental in the expansion of the B3 gene family. Ka/Ks analysis showed that the B3 gene family was under purifying selection. Further, chickpea B3 genes showed maximum orthology with Medicago followed by soybean and Arabidopsis. Promoter analyses of the B3 genes led to the identification of several tissue-specific and stress-responsive cis-regulatory elements. Expression profiling of the candidate B3 genes using publicly available RNA-seq data of several chickpea tissues indicated their putative role in plant development and abiotic stress response. These findings were further validated by real-time expression analysis. Overall, this study provides a comprehensive analysis of the B3 domain-containing proteins in chickpea that would aid in devising strategies for crop manipulation in chickpea.
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96
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Ullah A, Nisar M, Ali H, Hazrat A, Hayat K, Keerio AA, Ihsan M, Laiq M, Ullah S, Fahad S, Khan A, Khan AH, Akbar A, Yang X. Drought tolerance improvement in plants: an endophytic bacterial approach. Appl Microbiol Biotechnol 2019; 103:7385-7397. [PMID: 31375881 DOI: 10.1007/s00253-019-10045-4] [Citation(s) in RCA: 65] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Revised: 07/17/2019] [Accepted: 07/23/2019] [Indexed: 12/31/2022]
Abstract
Climate change is a crucial issue among the serious emerging problems which got a global attention in the last few decades. With the climate change, worldwide crop production has been seriously affected by drought stress. In this regard, various technologies including traditional breeding and genetic engineering are used to cope with drought stress. However, the interactions between plants and endophytic bacteria emerged as an interesting era of knowledge that can be used for novel agriculture practices. Endophytic bacteria which survive within plant tissues are among the most appropriate technologies improving plant growth and yield under drought conditions. These endophytic bacteria live within plant tissues and release various phytochemicals that assist plant to withstand in harsh environmental conditions, i.e., drought stress. Their plant growth-promoting characteristics include nitrogen fixation, phosphate solubilization, mineral uptake, and the production of siderophore, 1-aminocyclopropane-1-carboxylate (ACC) deaminase, and various phytohormones. These plant growth promoting characteristics of endophytic bacteria improve root length and density, which lead to the enhance drought tolerance. In addition, plant-endophytic bacteria assist plant to withstand against drought stress by producing drought-tolerant substances, for instance, abscisic acid, indole-3-acetic acid, ACC deaminase, and various volatile compounds. Indirectly, endophytic bacteria also improve osmotic adjustment, relative water content, and antioxidant activity of inoculated plants. Altogether, these bacterial-mediated drought tolerance and plant growth-promoting processes continue even under severe drought conditions which lead to enhanced plant growth promotion and yield. The present review highlights a natural and environment-friendly strategy in the form of drought-tolerant and plant growth-promoting endophytic bacteria to improve drought tolerance in plants.
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Affiliation(s)
- Abid Ullah
- Department of Botany, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan. .,National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, 430070, People's Republic of China.
| | - Mohammad Nisar
- Department of Botany, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan
| | - Hazrat Ali
- Department of Zoology, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan
| | - Ali Hazrat
- Department of Botany, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan
| | - Kashif Hayat
- Key Laboratory of Urban Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Ayaz Ali Keerio
- Department of Plant Breeding and Genetics, Faculty of Crop Production, Sindh Agriculture University, Tando Jam, Hyderabad, Sindh, Pakistan
| | - Muhammad Ihsan
- Department of Botany, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan
| | - Muhammad Laiq
- Department of Botany, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan
| | - Sana Ullah
- Department of Botany, University of Malakand, Chakdara Dir Lower, Khyber Pakhtunkhwa, 18800, Pakistan
| | - Shah Fahad
- Department of Agriculture, University of Swabi, Swabi, Khyber Pakhtunkhwa, Pakistan
| | - Aziz Khan
- Key Laboratory of Plant Genetic and Breeding, College of Agriculture, Guanxi University, Nanning, 530005, Guanxi, China
| | - Aamir Hamid Khan
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, 430070, People's Republic of China
| | - Adnan Akbar
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, 430070, People's Republic of China
| | - Xiyan Yang
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, 430070, People's Republic of China
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97
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Comparative Analysis of the PIN Auxin Transporter Gene Family in Different Plant Species: A Focus on Structural and Expression Profiling of PINs in Solanum tuberosum. Int J Mol Sci 2019; 20:ijms20133270. [PMID: 31277248 PMCID: PMC6650889 DOI: 10.3390/ijms20133270] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2019] [Revised: 06/21/2019] [Accepted: 06/27/2019] [Indexed: 12/19/2022] Open
Abstract
Plant growth and morphogenesis largely benefit from cell elongation and expansion and are normally regulated by environmental stimuli and endogenous hormones. Auxin, as one of the most significant plant growth regulators, controls various phases of plant growth and development. The PIN-FORMED (PIN) gene family of trans-membrane proteins considered as auxin efflux carriers plays a pivotal role in polar auxin transport and then mediates the growth of different plant tissues. In this study, the phylogenetic relationship and structural compositions of the PIN gene family in 19 plant species covering plant major lineages from algae to angiosperms were identified and analyzed by employing multiple bioinformatics methods. A total of 155 PIN genes were identified in these species and found that representative of the PIN gene family in algae came into existence and rapidly expanded in angiosperms (seed plants). The phylogenetic analysis indicated that the PIN proteins could be divided into 14 distinct clades, and the origin of PIN proteins could be traced back to the common ancestor of green algae. The structural analysis revealed that two putative types (canonical and noncanonical PINs) existed among the PIN proteins according to the length and the composition of the hydrophilic domain of the protein. The expression analysis of the PIN genes exhibited inordinate responsiveness to auxin (IAA) and ABA both in shoots and roots of Solanum tuberosum. While the majority of the StPINs were up-regulated in shoot and down-regulated in root by the two hormones. The majority of PIN genes had one or more putative auxin responses and ABA-inducible response elements in their promoter regions, respectively, implying that these phytohormones regulated the expression of StPIN genes. Our study emphasized the origin and expansion of the PIN gene family and aimed at providing useful insights for further structural and functional exploration of the PIN gene family in the future.
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98
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Kutschera U, Briggs WR. Photomorphogenesis of the root system in developing sunflower seedlings: a role for sucrose. PLANT BIOLOGY (STUTTGART, GERMANY) 2019; 21:627-633. [PMID: 30821893 DOI: 10.1111/plb.12981] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Accepted: 02/28/2019] [Indexed: 06/09/2023]
Abstract
The domestic sunflower (Helianthus annuus L. cv. 'Giganteus') has been used since the 19th century as a model plant for the study of seedling development in darkness and white light (WL) (scoto- versus photomorphogenesis). However, most pertinent studies have focused on the developmental patterns of the hypocotyl and cotyledons, whereas the root system has been largely ignored. In this study, we analysed entire sunflower seedlings (root and shoot) and quantified organ development in the above- and belowground parts of the organism under natural (non-sterile) conditions. We document that seedlings, raised in moist vermiculite, are covered with methylobacteria, microbes that are known to promote root development in Arabidopsis. Quantitative data revealed that during photomorphogenesis in WL, the root system expands by 90%, whereas stem elongation is inhibited, and hook opening/cotyledon expansion occurs. Root morphogenesis may be mediated via imported sucrose provided by the green, photosynthetically active cotyledons. This hypothesis is supported by the documented effect of sucrose on the induction of lateral root initials in sunflower cuttings. Under these experimental conditions, phytohormones (auxin, cytokinin, brassinolide) exerted little effect on root and cotyledon expansion, and no hormone-induced initiation of lateral roots was observed. It is concluded that sucrose not only acts as an energy source to fuel cell metabolism but is also a shoot-derived signalling molecule that triggers root morphogenesis.
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Affiliation(s)
- U Kutschera
- Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, USA
| | - W R Briggs
- Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, USA
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Huang S, Liang Z, Chen S, Sun H, Fan X, Wang C, Xu G, Zhang Y. A Transcription Factor, OsMADS57, Regulates Long-Distance Nitrate Transport and Root Elongation. PLANT PHYSIOLOGY 2019; 180:882-895. [PMID: 30886113 PMCID: PMC6548263 DOI: 10.1104/pp.19.00142] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Accepted: 02/25/2019] [Indexed: 05/19/2023]
Abstract
Root nitrate uptake adjusts to the plant's nitrogen demand for growth. Here, we report that OsMADS57, a MADS-box transcription factor, modulates nitrate translocation from rice (Oryza sativa) roots to shoots under low-nitrate conditions. OsMADS57 is abundantly expressed in xylem parenchyma cells of root stele and is induced by nitrate. Compared with wild-type rice plants supplied with 0.2 mM nitrate, osmads57 mutants had 31% less xylem loading of nitrate, while overexpression lines had 2-fold higher levels. Shoot-root 15N content ratios were 40% lower in the mutants and 76% higher in the overexpression lines. Rapid NO3 - root influx experiments showed that mutation of OsMADS57 did not affect root nitrate uptake. Reverse transcription quantitative PCR analysis of OsNRT2 nitrate transporter genes showed that after 5 min in 0.2 mM nitrate, only OsNRT2.3a (a vascular-specific high-affinity nitrate transporter) had reduced (by two-thirds) expression levels. At 60 min of nitrate treatment, lower expression levels were also observed for three additional NRT2 genes (OsNRT2.1/2.2/2.4). Conversely, in the overexpression lines, four NRT2 genes had much higher expression profiles at all time points tested. As previously reported, OsNRT2.3a functions in nitrate translocation, indicating the possible interaction between OsMADS57 and OsNRT2.3a Yeast one-hybrid and transient expression assays demonstrated that OsMADS57 binds to the CArG motif (CATTTTATAG) within the OsNRT2.3a promoter. Moreover, seminal root elongation was inhibited in osmads57 mutants, which may be associated with higher auxin levels in and auxin polar transport to root tips of mutant plants. Taken together, these results suggest that OsMADS57 has a role in regulating nitrate translocation from root to shoot via OsNRT2.3a.
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Affiliation(s)
- Shuangjie Huang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
- Henan Key Laboratory of Tea Plant Comprehensive Utilization in South Henan, Xinyang Agriculture and Forestry University, Xinyang 464000, China
| | - Zhihao Liang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Si Chen
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Huwei Sun
- College of Agronomy, Collaborative Innovation Center of Henan Grain Crops, Key Laboratory of Rice Biology in Henan Province, Henan Agricultural University, Zhengzhou 450002, China
| | - Xiaorong Fan
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Cailin Wang
- Institute of Food Crops of Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Guohua Xu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Yali Zhang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Key Laboratory of Plant Nutrition and Fertilization in Low-Middle Reaches of the Yangtze River, Ministry of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
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Liu M, Gong J, Li Y, Li X, Yang B, Zhang Z, Yang L, Hou X. Growth-defense trade-off regulated by hormones in grass plants growing under different grazing intensities. PHYSIOLOGIA PLANTARUM 2019; 166:553-569. [PMID: 30091152 DOI: 10.1111/ppl.12802] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Revised: 07/08/2018] [Accepted: 07/11/2018] [Indexed: 06/08/2023]
Abstract
Herbivory creates conflicts between a plant's need to allocate resources for growth and defense. It is not yet clear how plants rebalance resource utilization between growth and defense in response to increasing grazing intensity. We measured characteristics of the primary and secondary metabolism of Leymus chinensis at five levels of grazing intensity (control, light, moderate, heavy and extremely heavy). Furthermore, we evaluated hormone signaling by quantifying the impact of key hormones on plant growth and defense. Under light grazing intensity, indole-3-acetic acid and jasmonates appeared to promote the growth of L. chinensis through a high photosynthetic rate, high water-use efficiency and high soluble protein contents, whereas abscisic acid decreased these properties. Under moderate grazing intensity, L. chinensis had a low photosynthetic capacity but greater production of secondary metabolites (tannins, total flavonoids and total phenols), possibly induced by salicylic acid. When the grazing pressure further intensified, L. chinensis translocated more carbohydrates to its roots in order to survive and regrow. Leymus chinensis therefore exhibited a trade-off between growth and defense in order to survive and reproduce under herbivory. Plants developed different mechanisms to enhance their grazing tolerance by means of hormonal regulation.
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Affiliation(s)
- Min Liu
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Jirui Gong
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Ying Li
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Xiaobing Li
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Bo Yang
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Zihe Zhang
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Lili Yang
- Key Laboratory of Surface Processes and Resource Ecology, College of Resources Science and Technology, Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Xiangyang Hou
- Grassland Research Institute of Chinese Academy of Agricultural Science, Hohhot 010021, China
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