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Teixeira da Silva JA, Nezami-Alanagh E, Barreal ME, Kher MM, Wicaksono A, Gulyás A, Hidvégi N, Magyar-Tábori K, Mendler-Drienyovszki N, Márton L, Landín M, Gallego PP, Driver JA, Dobránszki J. Shoot tip necrosis of in vitro plant cultures: a reappraisal of possible causes and solutions. PLANTA 2020; 252:47. [PMID: 32885282 PMCID: PMC7471112 DOI: 10.1007/s00425-020-03449-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Accepted: 08/27/2020] [Indexed: 05/29/2023]
Abstract
Shoot tip necrosis is a physiological condition that negatively impacts the growth and development of in vitro plant shoot cultures across a wide range of species. Shoot tip necrosis is a physiological condition and disorder that can arise in plantlets or shoots in vitro that results in death of the shoot tip. This condition, which can spread basipetally and affect the emergence of axillary shoots from buds lower down the stem, is due to the cessation of apical dominance. STN can occur at both shoot multiplication and rooting stages. One of the most common factors that cause STN is nutrient deficiency or imbalance. Moreover, the presence or absence of plant growth regulators (auxins or cytokinins) at specific developmental stages may impact STN. The cytokinin to auxin ratio within an in vitro plant can be modified by varying the concentration of cytokinins used in the culture medium. The supply of nutrients to in vitro shoots or plantlets might also affect their hormonal balance, thus modifying the occurrence of STN. High relative humidity within culture vessels and hyperhydricity are associated with STN. An adequate supply of calcium as the divalent cation (Ca2+) can hinder STN by inhibiting the accumulation of phenolic compounds and thus programmed cell death. Moreover, the level of Ca2+ affects auxin transport and ethylene production, and higher ethylene production, which can occur as a result of high relative humidity in or poor ventilation of the in vitro culture vessel, induces STN. High relative humidity can decrease the mobility of Ca2+ within a plant, resulting in Ca2+ deficiency and STN. STN of in vitro shoots or plantlets can be halted or reversed by altering the basal medium, mainly the concentration of Ca2+, adjusting the levels of auxins or cytokinins, or modifying culture conditions. This review examines the literature related to STN, seeks to discover the associated factors and relations between them, proposes practical solutions, and attempts to better understand the mechanism(s) underlying this condition in vitro.
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Affiliation(s)
- Jaime A Teixeira da Silva
- , Miki-cho Post Office, 3011-2, P. O. Box 7, Ikenobe, Kagawa-ken, 761-0799, Japan.
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary.
| | - Esmaeil Nezami-Alanagh
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310, Vigo, Spain
- Pinar Biotech. Co., Ltd., East Azarbaijan Science and Technology Park , Tabriz, Iran
| | - María E Barreal
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310, Vigo, Spain
| | - Mafatlal M Kher
- School of Science (SOS), GSFC University, P. O. Fertilizernagar, Vadodara, 391750, Gujarat, India
| | - Adhityo Wicaksono
- Division of Biotechnology, Generasi Biologi Indonesia (Genbinesia) Foundation, Jl. Swadaya Barat No. 4, Gresik Regency, 61171, Indonesia.
| | - Andrea Gulyás
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary
| | - Norbert Hidvégi
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary
| | - Katalin Magyar-Tábori
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary
| | - Nóra Mendler-Drienyovszki
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary
| | - László Márton
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary
| | - Mariana Landín
- Department of Pharmacology, Pharmacy and Pharmaceutical Technology, Faculty of Pharmacy, University of Santiago, Santiago de Compostela, Spain
| | - Pedro Pablo Gallego
- Department of Plant Biology and Soil Science, Faculty of Biology, University of Vigo, 36310, Vigo, Spain
| | - John A Driver
- Driver Consulting Inc., 2601 Tim Bell Road, Waterford, CA, 95386, USA
| | - Judit Dobránszki
- Research Institute of Nyíregyháza, IAREF, University of Debrecen, P. O. Box 12, Nyíregyháza, 4400, Hungary
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152
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Zhao M, Chen J, Jin H, Qi Z. Extracellular Ca 2+ induces desensitized cytosolic Ca 2+ rise sensitive to phospholipase C inhibitor which suppresses root growth with Ca 2+ dependence. JOURNAL OF PLANT PHYSIOLOGY 2020; 252:153190. [PMID: 32688165 DOI: 10.1016/j.jplph.2020.153190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Revised: 05/04/2020] [Accepted: 05/09/2020] [Indexed: 06/11/2023]
Abstract
Calcium (Ca) is an essential element for all organisms. In animal cells, the plasma membrane-localized Ca receptor CaSR coupled to a phospholipase C (PLC)-dependent signaling cascade monitors extracellular Ca2+ concentrations ([Ca2+]ext) and responds with increases in cytosolic calcium concentrations ([Ca2+]cyt). Plant roots encounter variable soil conditions, but how they sense changes in [Ca2+]ext is largely unknown. In this study, we demonstrate that increasing [Ca2+]ext evokes a transient increase in [Ca2+] in the cytosol, mitochondria, and nuclei of Arabidopsis thaliana root cells. These increases were strongly desensitized to repeat applications of [Ca2+]ext, a typical feature of receptor-mediated cellular signaling in animal and plant cells. Treatment with gadolinium (Gd3+), a CaSR activator in animal cells, induced concentration-dependent increases in [Ca2+]cyt in roots, which showed self-desensitization and cross-desensitization to [Ca2+]ext-induced increases in [Ca2+]cyt (EICC). EICC was sensitive to extracellular H+, K+, Na+, and Mg2+ levels. Treatment with the PLC inhibitor neomycin suppressed EICC and Ca accumulation in roots. The inhibitory effect of neomycin on root elongation was fully rescued by increasing [Ca2+]ext but not [Mg2+] or [K+] in the growth medium. These results suggest that [Ca2+]ext and the movement of Ca2+ into the cytosol of plant roots are regulated by a receptor-mediated signaling pathway involving PLC.
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Affiliation(s)
- Man Zhao
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010071, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010071, PR China
| | - Jianhua Chen
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010071, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010071, PR China
| | - Huiqing Jin
- Research Centre for Horticultural Science and Technology of Hohhot, Hohhot, 010020, PR China
| | - Zhi Qi
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010071, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010071, PR China.
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153
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Yang J, Zhang T, Mao H, Jin H, Sun Y, Qi Z. A Leymus chinensis histidine-rich Ca 2+-binding protein binds Ca 2+/Zn 2+ and suppresses abscisic acid signaling in Arabidopsis. JOURNAL OF PLANT PHYSIOLOGY 2020; 252:153209. [PMID: 32791445 DOI: 10.1016/j.jplph.2020.153209] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2020] [Revised: 05/09/2020] [Accepted: 05/25/2020] [Indexed: 05/23/2023]
Abstract
Intracellular Ca2+ plays an essential role in plant cellular sensing of various environmental stress signals by modulating the activity of Ca2+-binding proteins. Leymus chinensis is a dominant forage grass widely distributed in the Eurasian Steppe that is well adapted to drought and salty soils common in the region. Through transcript profiling of L. chinensis roots, we identified a transcript predicted to encode histidine-rich calcium-binding protein (HRC), a protein recently characterized in wheat. L. chinensis HRC (LcH RC) localized in the nucleus, as demonstrated using a transient gene expression method that we developed for this species. Different regions of LcHRC showed affinity for either Ca2+ or Zn2+, but not Mg2+ and Mn2+. Arabidopsis thaliana seedlings heterologously overexpressing LcHRC showed greater sensitivity to abscisic acid (ABA), along with decreased expression of some ABA-induced marker genes, but no increase in ABA content. Screening a Arabidopsis cDNA yeast library identified a Tudor/PWWP/MBT-domain-containing protein (AtPWWP3) that interacts with LcHRC. AtPWWP3 also localized in the nucleus and is predicted to mediate gene expression by modifying histone deacetylation. Based on these results, we propose a functional model of LcHRC action.
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Affiliation(s)
- Ju Yang
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Ting Zhang
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Huiping Mao
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Huiqing Jin
- Research Centre for Horticultural Science and Technology of Hohhot, Hohhot, 010020, PR China
| | - Yongwei Sun
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Zhi Qi
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China.
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154
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Li J, He E, Romero-Freire A, Cao X, Zhao L, Qiu H. Coherent toxicity prediction framework for deciphering the joint effects of rare earth metals (La and Ce) under varied levels of calcium and NTA. CHEMOSPHERE 2020; 254:126905. [PMID: 32957298 DOI: 10.1016/j.chemosphere.2020.126905] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 04/24/2020] [Accepted: 04/25/2020] [Indexed: 06/11/2023]
Abstract
With the development of modern technologies, the exploitation and application of rare earth metals (REMs) have increased parallelly. Consequently, more REMs are entering into the environment and therefore there is a pressing need to assess their potential environmental hazards. Here, a standard toxicity test with wheat (Triticum aestivum) was conducted to investigate the single and mixture toxicity of La and Ce in solutions with different levels of calcium and nitrilotriacetic acid (NTA) and results were deciphered by different modeling approaches. Both La and Ce caused adverse effect to wheat, but the presence of Ca and NTA alleviated their toxicity. The obtained EC50 for [La] or [Ce] changed by more than 28-fold and by 4-fold, respectively, with the increase of Ca or NTA. The biotic ligand model (BLM) explained approximately 93% variation of single La or Ce toxicity. The binding constants obtained were 4.14, 6.67, and 6.59 for logKCaBL, logKLaBL, and logKCeBL respectively. The electrostatic toxicity model (ETM) was proved as effective as the BLM, with R2 = 0.93 for La and R2 = 0.92 for Ce. For La-Ce mixtures, parameters from single toxicity approaches were applied successfully to predict the mixture toxicity with concentration addition (CA) model based on the BLM or ETM theory (R2 = 0.92 and RMSE = 8.56; R2 = 0.90 and RMSE = 9.6, respectively). Thus, the results obtained in this study prove that both ETM and BLM theories are appropriate to predict single and mixture REMs toxicity, providing coherent and promising tools for the risk assessment of REM pollution.
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Affiliation(s)
- Jianqiu Li
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Ministry of Agriculture and Rural Affairs/Tianjin Key Laboratory of Agro-Environment and Agro-Product Safety, Agro-Environment Protection Institution, Ministry of Agriculture and Rural Affairs, Tianjin, 300191, China; School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Erkai He
- Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou, 510275, China
| | - Ana Romero-Freire
- Spanish National Research Council, Marine Research Institute (CSIC-IIM), Eduardo Cabello 6, 36208 Vigo, Spain
| | - Xinde Cao
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Ling Zhao
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Hao Qiu
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Ministry of Agriculture and Rural Affairs/Tianjin Key Laboratory of Agro-Environment and Agro-Product Safety, Agro-Environment Protection Institution, Ministry of Agriculture and Rural Affairs, Tianjin, 300191, China; School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China; Guangdong Provincial Key Laboratory of Environmental Pollution Control and Remediation Technology, Sun Yat-sen University, Guangzhou, 510275, China.
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155
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Zhang X, Wang J, Zubarev RA. Slight Deuterium Enrichment in Water Acts as an Antioxidant: Is Deuterium a Cell Growth Regulator? Mol Cell Proteomics 2020; 19:1790-1804. [PMID: 32769093 PMCID: PMC7664117 DOI: 10.1074/mcp.ra120.002231] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Revised: 08/04/2020] [Indexed: 11/06/2022] Open
Abstract
Small admixtures in water, e.g. of metal ions, often act as cell growth regulators. Here we report that enrichment of deuterium content in water, normally found at 8 mm concentration, two-three folds increases cell proliferation and lowers the oxidative stress level as well. Acting as an anti-oxidant, deuterium-enriched water prevents the toxic effect of such oxidative agents as hydrogen peroxide and auranofin. This action is opposite to that of deuterium depletion that is known to suppress cell growth and induce oxidative stress in mitochondria. We thus hypothesize that deuterium may be a natural cell growth regulator that controls mitochondrial oxidation-reduction balance. Because growth acceleration is reduced approximately by half by addition to water a minute amount (0.15%) of 18O isotope, at least part of the deuterium effect on cell growth can be explained by the isotopic resonance phenomenon. A slight (≈2-fold) enrichment of deuterium in water accelerates human cell growth. Quantitative MS based proteomics determined changes in protein abundances and redox states and found that deuterium-enriched water acts mainly through decreasing ROS production in mitochondria. This action is opposite to that of deuterium depletion that suppresses cell growth by inducing oxidative stress. Thus deuterium may be a natural cell growth regulator that controls mitochondrial oxidation-reduction balance. The role of isotopic resonance in this effect was validated by further experiments on bacteria.
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Affiliation(s)
- Xuepei Zhang
- Division of Physiological Chemistry I, Dept. of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden
| | - Jin Wang
- Division of Physiological Chemistry I, Dept. of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden; Department of Pharmacology, School of Basic Medical Sciences, Xi'an Jiaotong University Health Science Center, Xi'an, Shannxi, P.R. China
| | - Roman A Zubarev
- Division of Physiological Chemistry I, Dept. of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden; SciLIfeLab, Stockholm, Sweden; Department of Pharmacological & Technological Chemistry, I.M. Sechenov First Moscow State Medical University, Moscow, Russia.
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156
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Hu X, Tian Z, Li X, Wang S, Pei H, Sun H, Zhang Z. Green, Simple, and Effective Process for the Comprehensive Utilization of Shrimp Shell Waste. ACS OMEGA 2020; 5:19227-19235. [PMID: 32775926 PMCID: PMC7409256 DOI: 10.1021/acsomega.0c02705] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 07/10/2020] [Indexed: 06/11/2023]
Abstract
An environmentally friendly approach for the comprehensive utilization of shrimp shell waste was reported. Instant catapult steam explosion (ICSE) was employed for shrimp shell waste pretreatment. After ICSE, lower crystallinity and greater surface areas of shrimp shells were achieved, which significantly enhanced the extraction of chitin. Compared to the traditional method, weaker organic acid (HCOOH) and much lower dosages of KOH (90% molar less) were used, and chitin with a high demineralization rate (98.2%) and deproteinization rate (97.7%) was obtained. The wastewater was neutralized by simply intermixing, and it was recycled as a potential plant fertilizer because it contained more oligopeptides, calcium, and potassium, but it was less salty and therefore non-toxic to plants. The whole process produced less solid waste and no waste water. The obtained chitin also showed a low degree of acetylation (50.5%), which demonstrates the potential for environmentally friendly preparation of chitosan in dilute alkali through ICSE.
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Affiliation(s)
- Xuefang Hu
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
| | - Zhiqing Tian
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
- Chinese Academy of Inspection and Quarantine, Beijing 100176, China
| | - Xurui Li
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
| | - Shikui Wang
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
| | - Haisheng Pei
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
| | - Hao Sun
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
| | - Zhimin Zhang
- Key Laboratory of
Agro-Products Postharvest Handling, Ministry of Agriculture, Academy of Agricultural Planning and Engineering Mara, Beijing 100121, China
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157
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Hunková J, Gajdošová A, Szabóová M. Effect of Mesos Components (MgSO 4, CaCl 2, KH 2PO 4) on In Vitro Shoot Growth of Blackberry, Blueberry, and Saskatoon. PLANTS (BASEL, SWITZERLAND) 2020; 9:plants9080935. [PMID: 32722012 PMCID: PMC7464212 DOI: 10.3390/plants9080935] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 07/11/2020] [Accepted: 07/22/2020] [Indexed: 05/14/2023]
Abstract
Berry fruit species are, in many countries, considered biologically and economically valuable and important species of small fruits. The aim of this work was to examine the influence of either decreased or increased mesos concentrations (MgSO4, CaCl2, and KH2PO4) on shoot multiplication of five cultivars of three small fruit species (Amelanchier alnifolia var. cusickii, Rubus fruticosus 'Black Satin' and 'Loch Ness', and Vaccinium corymbosum 'Brigitta Blue' and 'Toro'). Mesos nutrients were manipulated from half to four times their base concentration. The results indicate that mesos manipulation significantly influences the number and length of shoots in most of the studied cultivars. The greatest multiplication rate for A. alnifolia was achieved with tripled mesos, whereas 'Black Satin' and 'Loch Ness' reacted positively to a lower (1-2x) concentration of mesos. Decreasing the concentration of mesos to half led to worse quality in both blackberry and Saskatoon shoots. 'Brigitta Blue' was more sensitive to greater mesos concentrations compared to 'Toro'. Optimizing the mineral nutrition of plants cultivated in vitro enhances their multiplication rate and contributes to a higher production of good quality plantlets.
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158
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Ji C, Liu Z, Hao L, Song X, Wang C, Liu Y, Li H, Li C, Gao Q, Liu X. Effects of Enterobacter cloacae HG-1 on the Nitrogen-Fixing Community Structure of Wheat Rhizosphere Soil and on Salt Tolerance. FRONTIERS IN PLANT SCIENCE 2020; 11:1094. [PMID: 32765571 PMCID: PMC7380250 DOI: 10.3389/fpls.2020.01094] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Accepted: 07/03/2020] [Indexed: 05/19/2023]
Abstract
The present study investigated the physiological and biochemical characteristics of Enterobacter cloacae HG-1 isolated from saline-alkali soil. We further studied the effect of this strain on the salt tolerance of wheat and on the community structure of nitrogen-fixing bacteria in rhizosphere soil. We determined that the investigated strain had high nitrogen fixation activity and produced iron carriers, 1-aminocyclopropane-1-carboxylic acid deaminase, and plant hormones. The metabolites of this strain contained 2,3-butanediol, [R-(R*, R*)], 2-heptanone, and other growth-promoting and antibacterial substances. The strain was also highly salt-tolerant (10% NaCl). After the inoculation of wheat with the HG-1 strain, we recorded increases in root length, plant height, fresh weight, and dry weight of 19.15%, 18.83%, 16.67%, and 17.96%, respectively, compared with uninoculated plants (P < 0.05). Compared with the leaves of uninoculated plants, the proline concentration in the leaves of inoculated plants increased by 12.43% (P < 0.05), the malondialdehyde level decreased by 27.26% (P < 0.05), K+ increased by 20.69%, Ca2+ increased by 57.53% and Na+ decreased by 31.43% (all P<0.05). Furthermore, we detected that inoculation with the HG-1 strain did not affect the species composition of nitrogen-fixing bacteria in wheat rhizosphere soil at the phylum level. However, the average relative abundance of Proteobacteria was significantly increased, whereas the abundance of Verrucomiorobia was significantly decreased compared with uninoculated plants. At the genus level, we detected 32 genera in control samples and 27 genera in inoculated samples, and the species diversity and relative abundance of samples inoculated with the HG-1 strain decreased compared with uninoculated plants. Inoculated samples had lower abundances of Azospirillum, Rhodomicrobium, and Anabaena. Our study demonstrated that the inoculation of wheat with E. cloacae HG-1 could promote the growth of wheat under salt stress and increase salt stress tolerance. The results of this study investigating the interaction among soil, plants, and microorganisms supplement agricultural microbial databases and could provide a reference for the development of microbial-based saline soil improvement programs.
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Affiliation(s)
- Chao Ji
- College of Forestry, Shandong Agriculture University, Taian, China
- State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian, China
| | - Zhaoyang Liu
- College of Forestry, Shandong Agriculture University, Taian, China
| | - Liping Hao
- College of Plant Conservation, Shandong Agriculture University, Taian, China
| | - Xin Song
- College of Forestry, Shandong Agriculture University, Taian, China
- State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian, China
| | - Changdong Wang
- College of Forestry, Shandong Agriculture University, Taian, China
| | - Yue Liu
- College of Forestry, Shandong Agriculture University, Taian, China
| | - Huying Li
- College of Forestry, Shandong Agriculture University, Taian, China
- State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian, China
| | - Chaohui Li
- College of Forestry, Shandong Agriculture University, Taian, China
| | - Qixiong Gao
- College of Forestry, Shandong Agriculture University, Taian, China
| | - Xunli Liu
- College of Forestry, Shandong Agriculture University, Taian, China
- State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian, China
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159
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Exogenous Glutathione-Mediated Drought Stress Tolerance in Rice (Oryza sativa L.) is Associated with Lower Oxidative Damage and Favorable Ionic Homeostasis. IRANIAN JOURNAL OF SCIENCE AND TECHNOLOGY, TRANSACTIONS A: SCIENCE 2020. [DOI: 10.1007/s40995-020-00917-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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160
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Lombardi N, Salzano AM, Troise AD, Scaloni A, Vitaglione P, Vinale F, Marra R, Caira S, Lorito M, d’Errico G, Lanzuise S, Woo SL. Effect of Trichoderma Bioactive Metabolite Treatments on the Production, Quality, and Protein Profile of Strawberry Fruits. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:7246-7258. [PMID: 32426974 PMCID: PMC8154561 DOI: 10.1021/acs.jafc.0c01438] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Revised: 05/14/2020] [Accepted: 05/18/2020] [Indexed: 05/30/2023]
Abstract
Fungi of the genus Trichoderma produce secondary metabolites having several biological activities that affect plant metabolism. We examined the effect of three Trichoderma bioactive metabolites (BAMs), namely, 6-pentyl-α-pyrone (6PP), harzianic acid (HA), and hydrophobin 1 (HYTLO1), on yield, fruit quality, and protein representation of strawberry plants. In particular, 6PP and HA increased the plant yield and number of fruits, when compared to control, while HYTLO1 promoted the growth of the roots and increased the total soluble solids content up to 19% and the accumulation of ascorbic acid and cyanidin 3-O-glucoside in red ripened fruits. Proteomic analysis showed that BAMs influenced the representation of proteins associated with the protein metabolism, response to stress/external stimuli, vesicle trafficking, carbon/energy, and secondary metabolism. Results suggest that the application of Trichoderma BAMs affects strawberry plant productivity and fruit quality and integrate previous observations on deregulated molecular processes in roots and leaves of Trichoderma-treated plants with original data on fruits.
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Affiliation(s)
- Nadia Lombardi
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
| | - Anna Maria Salzano
- Proteomics
& Mass Spectrometry Laboratory, ISPAAM, National Research Council, 80131 Naples, Italy
| | - Antonio Dario Troise
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
- Proteomics
& Mass Spectrometry Laboratory, ISPAAM, National Research Council, 80131 Naples, Italy
| | - Andrea Scaloni
- Proteomics
& Mass Spectrometry Laboratory, ISPAAM, National Research Council, 80131 Naples, Italy
| | - Paola Vitaglione
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
| | - Francesco Vinale
- Department
of Veterinary Medicine and Animal Productions, University of Naples Federico II, 80138 Naples, Italy
- Institute
for Sustainable Plant Protection, National
Research Council, 80055 Portici, Naples, Italy
| | - Roberta Marra
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
| | - Simonetta Caira
- Proteomics
& Mass Spectrometry Laboratory, ISPAAM, National Research Council, 80131 Naples, Italy
| | - Matteo Lorito
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
- Institute
for Sustainable Plant Protection, National
Research Council, 80055 Portici, Naples, Italy
- Task
Force on Microbiome Studies, University of Naples Federico II, 80131 Naples, Italy
| | - Giada d’Errico
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
| | - Stefania Lanzuise
- Department
of Agricultural Sciences, University of
Naples Federico II, 80055 Portici, Naples, Italy
| | - Sheridan Lois Woo
- Institute
for Sustainable Plant Protection, National
Research Council, 80055 Portici, Naples, Italy
- Task
Force on Microbiome Studies, University of Naples Federico II, 80131 Naples, Italy
- Department
of Pharmacy, University of Naples Federico
II, 80131 Naples, Italy
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161
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Lombardi N, Caira S, Troise AD, Scaloni A, Vitaglione P, Vinale F, Marra R, Salzano AM, Lorito M, Woo SL. Trichoderma Applications on Strawberry Plants Modulate the Physiological Processes Positively Affecting Fruit Production and Quality. Front Microbiol 2020; 11:1364. [PMID: 32719661 PMCID: PMC7350708 DOI: 10.3389/fmicb.2020.01364] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Accepted: 05/27/2020] [Indexed: 11/13/2022] Open
Abstract
Many Trichoderma spp. are successful plant beneficial microbial inoculants due to their ability to act as biocontrol agents with direct antagonistic activities to phytopathogens, and as biostimulants capable of promoting plant growth. This work investigated the effects of treatments with three selected Trichoderma strains (T22, TH1, and GV41) to strawberry plants on the productivity, metabolites and proteome of the formed fruits. Trichoderma applications stimulated plant growth, increased strawberry fruit yield, and favored selective accumulation of anthocyanins and other antioxidants in red ripened fruits. Proteomic analysis of fruits harvested from the plants previously treated with Trichoderma demonstrated that the microbial inoculants highly affected the representation of proteins associated with responses to stress/external stimuli, nutrient uptake, protein metabolism, carbon/energy metabolism and secondary metabolism, also providing a possible explanation to the presence of specific metabolites in fruits. Bioinformatic analysis of these differential proteins revealed a central network of interacting molecular species, providing a rationale to the concomitant modulation of different plant physiological processes following the microbial inoculation. These findings indicated that the application of Trichoderma-based products exerts a positive impact on strawberry, integrating well with previous observations on the molecular mechanisms activated in roots and leaves of other tested plant species, demonstrating that the efficacy of using a biological approach with beneficial microbes on the maturing plant is also able to transfer advantages to the developing fruits.
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Affiliation(s)
- Nadia Lombardi
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy
| | - Simonetta Caira
- Proteomics and Mass Spectrometry Laboratory, ISPAAM, National Research Council, Naples, Italy
| | - Antonio Dario Troise
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy.,Proteomics and Mass Spectrometry Laboratory, ISPAAM, National Research Council, Naples, Italy
| | - Andrea Scaloni
- Proteomics and Mass Spectrometry Laboratory, ISPAAM, National Research Council, Naples, Italy
| | - Paola Vitaglione
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy
| | - Francesco Vinale
- Department of Veterinary Medicine and Animal Productions, University of Naples Federico II, Naples, Italy.,Institute for Sustainable Plant Protection, National Research Council, Portici, Italy
| | - Roberta Marra
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy
| | - Anna Maria Salzano
- Proteomics and Mass Spectrometry Laboratory, ISPAAM, National Research Council, Naples, Italy
| | - Matteo Lorito
- Department of Agricultural Sciences, University of Naples Federico II, Naples, Italy.,Institute for Sustainable Plant Protection, National Research Council, Portici, Italy.,Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy
| | - Sheridan Lois Woo
- Institute for Sustainable Plant Protection, National Research Council, Portici, Italy.,Task Force on Microbiome Studies, University of Naples Federico II, Naples, Italy.,Department of Pharmacy, University of Naples Federico II, Naples, Italy
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162
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Klińska S, Jasieniecka-Gazarkiewicz K, Demski K, Banaś A. Editing of phosphatidic acid and phosphatidylethanolamine by acyl-CoA: lysophospholipid acyltransferases in developing Camelina sativa seeds. PLANTA 2020; 252:4. [PMID: 32524208 PMCID: PMC7286856 DOI: 10.1007/s00425-020-03408-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/08/2020] [Accepted: 05/22/2020] [Indexed: 06/11/2023]
Abstract
The main source of polyunsaturated acyl-CoA in cytoplasmic acyl-CoA pool of Camelina sativa seeds are fatty acids derived from phosphatidylcholine followed by phosphatidic acid. Contribution of phosphatidylethanolamine is negligible. While phosphatidylethanolamine (PE) is the second most abundant phospholipid, phosphatidic acid (PA) only constitutes a small fraction of C. sativa seeds' polar lipids. In spite of this, the relative contribution of PA in providing fatty acids for the synthesis of acyl-CoA, supplying cytosolic acyl-CoA pool seems to be much higher than the contribution of PE. Our data indicate that up to 5% of fatty acids present in mature C. sativa seeds are first esterified with PA, in comparison to 2% first esterified with PE, before being transferred into acyl-CoA pool via backward reactions of either acyl-CoA:lysophosphatidic acid acyltransferases (CsLPAATs) or acyl-CoA:lysophoshatidylethanolamine acyltransferases (CsLPEATs). Those acyl-CoAs are later reused for lipid biosynthesis or remodelling. In the forward reactions both aforementioned acyltransferases display the highest activity at 30 °C. The spectrum of optimal pH differs for both enzymes with CsLPAATs most active between pH 7.5-9.0 and CsLPEATs between pH 9.0 to 10.0. Whereas addition of magnesium ions stimulates CsLPAATs, calcium and potassium ions inhibit them in concentrations of 0.05-2.0 mM. All three types of ions inhibit CsLPEATs activity. Both tested acyltransferases present the highest preferences towards 16:0-CoA and unsaturated 18-carbon acyl-CoAs in forward reactions. However, CsLPAATs preferentially utilise 18:1-CoA and CsLPEATs preferentially utilise 18:2-CoA while catalysing fatty acid remodelling of PA and PE, respectively.
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Affiliation(s)
- Sylwia Klińska
- Intercollegiate Faculty of Biotechnology, University of Gdansk and Medical University of Gdansk, Abrahama 58, 80-307, Gdansk, Poland
| | | | - Kamil Demski
- Intercollegiate Faculty of Biotechnology, University of Gdansk and Medical University of Gdansk, Abrahama 58, 80-307, Gdansk, Poland
| | - Antoni Banaś
- Intercollegiate Faculty of Biotechnology, University of Gdansk and Medical University of Gdansk, Abrahama 58, 80-307, Gdansk, Poland
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163
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Grzechowiak M, Sliwiak J, Jaskolski M, Ruszkowski M. Structural Studies of Glutamate Dehydrogenase (Isoform 1) From Arabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism. FRONTIERS IN PLANT SCIENCE 2020; 11:754. [PMID: 32655590 PMCID: PMC7326016 DOI: 10.3389/fpls.2020.00754] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Accepted: 05/12/2020] [Indexed: 05/24/2023]
Abstract
Glutamate dehydrogenase (GDH) releases ammonia in a reversible NAD(P)+-dependent oxidative deamination of glutamate that yields 2-oxoglutarate (2OG). In current perception, GDH contributes to Glu homeostasis and plays a significant role at the junction of carbon and nitrogen assimilation pathways. GDHs are members of a superfamily of ELFV (Glu/Leu/Phe/Val) amino acid dehydrogenases and are subdivided into three subclasses, based on coenzyme specificity: NAD+-specific, NAD+/NADP+ dual-specific, and NADP+-specific. We determined in this work that the mitochondrial AtGDH1 isozyme from A. thaliana is NAD+-specific. Altogether, A. thaliana expresses three GDH isozymes (AtGDH1-3) targeted to mitochondria, of which AtGDH2 has an extra EF-hand motif and is stimulated by calcium. Our enzymatic assays of AtGDH1 established that its sensitivity to calcium is negligible. In vivo the AtGDH1-3 enzymes form homo- and heterohexamers of varied composition. We solved the crystal structure of recombinant AtGDH1 in the apo-form and in complex with NAD+ at 2.59 and 2.03 Å resolution, respectively. We demonstrate also that both in the apo form and in 1:1 complex with NAD+, it forms D 3-symmetric homohexamers. A subunit of AtGDH1 consists of domain I, which is involved in hexamer formation and substrate binding, and of domain II which binds coenzyme. Most of the subunits in our crystal structures, including those in NAD+ complex, are in open conformation, with domain II forming a large (albeit variable) angle with domain I. One of the subunits of the AtGDH1-NAD+ hexamer contains a serendipitous 2OG molecule in the active site, causing a dramatic (∼25°) closure of the domains. We provide convincing evidence that the N-terminal peptide preceding domain I is a mitochondrial targeting signal, with a predicted cleavage site for mitochondrial processing peptidase (MPP) at Leu17-Leu18 that is followed by an unexpected potassium coordination site (Ser27, Ile30). We also identified several MPD [(+/-)-2-methyl-2,4-pentanediol] binding sites with conserved sequence. Although AtGDH1 is insensitive to MPD in our assays, the observation of druggable sites opens a potential for non-competitive herbicide design.
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Affiliation(s)
- Marta Grzechowiak
- Center for Biocrystallographic Research Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland
| | - Joanna Sliwiak
- Center for Biocrystallographic Research Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland
| | - Mariusz Jaskolski
- Center for Biocrystallographic Research Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland
- Department of Crystallography, Faculty of Chemistry, Adam Mickiewicz University, Poznań, Poland
| | - Milosz Ruszkowski
- Center for Biocrystallographic Research Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland
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164
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Zhang Z, Hu B, Chu C. Towards understanding the hierarchical nitrogen signalling network in plants. CURRENT OPINION IN PLANT BIOLOGY 2020; 55:60-65. [PMID: 32304938 DOI: 10.1016/j.pbi.2020.03.006] [Citation(s) in RCA: 34] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Revised: 01/21/2020] [Accepted: 03/04/2020] [Indexed: 05/12/2023]
Abstract
Nitrogen (N) is the most abundant mineral elements in plants, and the application of inorganic N fertilizer makes huge contribution to the crop production and global food security. However, low N use efficiency (NUE) and overapplication of N fertilizers causes ever-growing environmental problems. Understanding the molecular mechanisms of N sensing and signalling in plants will provide molecular basis for NUE improvement of crops. Forward genetics screening and functional analysis have characterized the NRT1.1-NLP centered N signalling pathway at the cellular level. With the incorporation of systems biology approaches, a preliminary N regulatory network has been delineated. Meanwhile, long-distance N signalling has also been unveiled at the whole plant level. This review highlights most recent understanding of the N signalling network in plants, and also discusses how to further integrate hierarchical regulation of N signalling in plants.
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Affiliation(s)
- Zhihua Zhang
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, China; School of Life Sciences, Guangzhou University, Guangzhou 510006, China; Guangdong Laboratory of Lingnan Modern Agricultural Science and Technology, Guangzhou 510642, China
| | - Bin Hu
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, China
| | - Chengcai Chu
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, the Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, China.
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165
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Huang X, Soolanayakanahally RY, Guy RD, Shunmugam ASK, Mansfield SD. Differences in growth and physiological and metabolic responses among Canadian native and hybrid willows (Salix spp.) under salinity stress. TREE PHYSIOLOGY 2020; 40:652-666. [PMID: 32083671 DOI: 10.1093/treephys/tpaa017] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2019] [Revised: 01/22/2020] [Accepted: 01/31/2020] [Indexed: 06/10/2023]
Abstract
Globally, soil salinization is becoming increasingly prevalent, due to local hydrogeologic phenomena, climate change and anthropogenic activities. This has significantly curtailed current world food production and limits future production potential. In the prairie region of North America, sulfate salts, rather than sodium chloride, are often the predominant cause of soil degradation. In order to amend soil quality, revegetate salt-affected sites and recover economic loss associated with soil salinization, the establishment of short-rotation coppice plantations with willows (Salix spp.) has been suggested as a possible solution. To screen for the best candidates for such an application, 20 hybrid and 16 native willow genotypes were treated with three different salt conditions for 3 months. The treatments were designed to reflect the salt composition and concentrations on North American prairies. Under moderate salinity treatment (7 dS m-1), hybrid willows had better growth, as they established quickly while managing salt transport and mineral nutrition balance. However, native willows showed higher potential for long-term survival under severe salinity treatment (14 dS m-1), showing a lower sodium:potassium ratio in roots and better photosynthetic performance. Two native willow genotypes with high osmotic and salinity tolerance indices, specifically LAR-10 and MJW-9, are expected to show superior potential for remediating salt-affected sites. In addition, we observed significantly higher sulfate/sulfur concentrations in both leaf and root tissues in response to the severe salinity treatment, shedding light on the effect of sulfate salinity on sulfate uptake, and potentially sulfur metabolism in plants.
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Affiliation(s)
- Xinyi Huang
- Department of Wood Science, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, BC V6T 1Z4, Canada
| | | | - Robert D Guy
- Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, BC V6T 1Z4, Canada
| | - Arun S K Shunmugam
- Department of Jobs, Precincts and Regions, Agriculture Victoria Research, 110 Natimuk Road, Horsham, VIC 3400, Australia
| | - Shawn D Mansfield
- Department of Wood Science, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, BC V6T 1Z4, Canada
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166
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Liu Y, He X, Hu H, Zhang Q. Cogrinding with alkaline metal salts to enhance the reactivity of silicate mineral to serve as silicon fertilizer. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137347] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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167
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Förste F, Mantouvalou I, Kanngießer B, Stosnach H, Lachner LAM, Fischer K, Krause K. Selective mineral transport barriers at Cuscuta-host infection sites. PHYSIOLOGIA PLANTARUM 2020; 168:934-947. [PMID: 31605394 DOI: 10.1111/ppl.13035] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 09/27/2019] [Accepted: 10/08/2019] [Indexed: 05/16/2023]
Abstract
The uptake of inorganic nutrients by rootless parasitic plants, which depend on host connections for all nutrient supplies, is largely uncharted. Using X-ray fluorescence spectroscopy (XRF), we analyzed the element composition of macro- and micronutrients at infection sites of the parasitic angiosperm Cuscuta reflexa growing on hosts of the genus Pelargonium. Imaging methods combining XRF with 2-D or 3-D (confocal) microscopy show that most of the measured elements are present at similar concentrations in the parasite compared to the host. However, calcium and strontium levels drop pronouncedly at the host/parasite interface, and manganese appears to accumulate in the host tissue surrounding the interface. Chlorine is present in the haustorium at similar levels as in the host tissue but is decreased in the stem of the parasite. Thus, our observations indicate a restricted uptake of calcium, strontium, manganese and chlorine by the parasite. Xylem-mobile dyes, which can probe for xylem connectivity between host and parasite, provided evidence for an interspecies xylem flow, which in theory would be expected to carry all of the elements indiscriminately. We thus conclude that inorganic nutrient uptake by the parasite Cuscuta is regulated by specific selective barriers whose existence has evaded detection until now.
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Affiliation(s)
- Frank Förste
- Institute for Optics and Atomic Physics, Technical University of Berlin, Berlin, 10623, Germany
| | - Ioanna Mantouvalou
- Institute for Optics and Atomic Physics, Technical University of Berlin, Berlin, 10623, Germany
| | - Birgit Kanngießer
- Institute for Optics and Atomic Physics, Technical University of Berlin, Berlin, 10623, Germany
| | | | - Lena Anna-Maria Lachner
- Department of Arctic and Marine Biology, The Arctic University of Norway UiT, Tromsø, 9019, Norway
| | - Karsten Fischer
- Department of Arctic and Marine Biology, The Arctic University of Norway UiT, Tromsø, 9019, Norway
| | - Kirsten Krause
- Department of Arctic and Marine Biology, The Arctic University of Norway UiT, Tromsø, 9019, Norway
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168
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Shikanai Y, Yoshida R, Hirano T, Enomoto Y, Li B, Asada M, Yamagami M, Yamaguchi K, Shigenobu S, Tabata R, Sawa S, Okada H, Ohya Y, Kamiya T, Fujiwara T. Callose Synthesis Suppresses Cell Death Induced by Low-Calcium Conditions in Leaves. PLANT PHYSIOLOGY 2020; 182:2199-2212. [PMID: 32024698 PMCID: PMC7140939 DOI: 10.1104/pp.19.00784] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Accepted: 12/17/2019] [Indexed: 05/08/2023]
Abstract
Despite the importance of preventing calcium (Ca) deficiency disorders in agriculture, knowledge of the molecular mechanisms underlying plant adaptations to low-Ca conditions is limited. In this study, we provide evidence for a crucial involvement of callose synthesis in the survival of Arabidopsis (Arabidopsis thaliana) under low-Ca conditions. A mutant sensitive to low-Ca conditions, low calcium sensitive3 (lcs3), exhibited high levels of cell death in emerging leaves and had defects in its expanding true leaves under low-Ca conditions. Further analyses showed that the causal mutation was located in a putative β-1,3-glucan (callose) synthase gene, GLUCAN SYNTHASE-LIKE10 (GSL10). Yeast complementation assay results showed that GSL10 encodes a functional callose synthase. Ectopic callose significantly accumulated in wild-type plants under low-Ca conditions, but at a low level in lcs3 The low-Ca sensitivity of lcs3 was phenocopied by the application of callose synthase inhibitors in wild-type plants, which resulted in leaf expansion failure, cell death, and reduced ectopic callose levels under low-Ca conditions. Transcriptome analyses showed that the expression of genes related to cell wall and defense responses was altered in both wild-type plants under low-Ca conditions and in lcs3 under normal-Ca conditions, suggesting that GSL10 is required for the alleviation of both cell wall damage and defense responses caused by low Ca levels. These results suggest that callose synthesis is essential for the prevention of cell death under low-Ca conditions and plays a key role in plants' survival strategies under low-Ca conditions.
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Affiliation(s)
- Yusuke Shikanai
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
| | - Ryosuke Yoshida
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
| | - Tomoko Hirano
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
| | - Yusuke Enomoto
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
| | - Baohai Li
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
| | - Mayu Asada
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
| | - Mutsumi Yamagami
- Department of Radioecology, Institute of Environmental Sciences, Aomori 039-3212, Japan
| | - Katsushi Yamaguchi
- NIBB Core Research Facilities, National Institute for Basic Biology, Aichi 444-8585, Japan
| | - Shuji Shigenobu
- NIBB Core Research Facilities, National Institute for Basic Biology, Aichi 444-8585, Japan
| | - Ryo Tabata
- Graduate School of Bioagricultural Sciences, Nagoya University, Aichi 464-8601, Japan
| | - Shinichiro Sawa
- Graduate School of Science and Technology, Kumamoto University, Kumamoto 860-8555, Japan
| | - Hiroki Okada
- Graduate School of Frontier Sciences, University of Tokyo, Chiba 277-8562, Japan
| | - Yoshikazu Ohya
- Graduate School of Frontier Sciences, University of Tokyo, Chiba 277-8562, Japan
| | - Takehiro Kamiya
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
- Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Saitama 332-0012, Japan
| | - Toru Fujiwara
- Graduate School of Agricultural and Life Sciences, University of Tokyo, Tokyo 113-8657, Japan
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169
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da Silva ICB, Marques ACR, Quadros FF, Sans GA, Soares VM, De Conti L, Ceretta CA, Ferreira PAA, Toselli M, Brunetto G. Spatial variation of herbaceous cover species community in Cu-contaminated vineyards in Pampa biome. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:13348-13359. [PMID: 32020452 DOI: 10.1007/s11356-020-07851-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2019] [Accepted: 01/23/2020] [Indexed: 06/10/2023]
Abstract
Study's objective was to evaluate spatial variability of herbaceous cover species community in vineyards cultivated in soil with increasing Cu levels in Pampa biome. Three vineyards, with increasing soil Cu available contents and a natural field area (NF), were selected. In each experimental area, soil Cu content, botanical composition, cumulative aerial biomass, and aerial part Cu concentration, in most frequent species, were evaluated. In total, 39 vascular plant species were identified, including four exotic species. Biodiversity indicators did not significantly correlate with soil Cu. However, botanical composition variation could be observed. In NF, Poaceae and Asteraceae families presented greater dry mass contribution, while this contribution decreased in higher soil Cu concentration areas. The Cu concentration and accumulation in plant aerial part were higher in older vineyards, as plant aerial part accumulated, in average, 13.8 mg Cu m-2. Among species found in experimental fields, Ageratum conyzoides, a species known to form Cu-tolerant populations, occurred in most areas, especially in vineyards, presenting higher aerial Cu concentrations, with a mean of 126.47 mg kg-1. Soil enrichment with Cu did not alter the vegetation's biodiversity, but may have contributed to the botanical composition modification. The native species, P. plicatulum and A. conyzoides, presented a high bio-accumulation factor and are potential candidates for phytoremediation techniques.
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Affiliation(s)
| | | | | | - Gabriel Alberto Sans
- Soil Science Department, Federal University of Santa Maria, Santa Maria, RS, 97105-900, Brazil
| | - Vanessa Marques Soares
- Soil Science Department, Federal University of Santa Maria, Santa Maria, RS, 97105-900, Brazil
| | | | - Carlos Alberto Ceretta
- Soil Science Department, Federal University of Santa Maria, Santa Maria, RS, 97105-900, Brazil
| | | | | | - Gustavo Brunetto
- Soil Science Department, Federal University of Santa Maria, Santa Maria, RS, 97105-900, Brazil
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170
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Winnicki K. The Winner Takes It All: Auxin-The Main Player during Plant Embryogenesis. Cells 2020; 9:E606. [PMID: 32138372 PMCID: PMC7140527 DOI: 10.3390/cells9030606] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Revised: 02/21/2020] [Accepted: 02/27/2020] [Indexed: 12/11/2022] Open
Abstract
In plants, the first asymmetrical division of a zygote leads to the formation of two cells with different developmental fates. The establishment of various patterns relies on spatial and temporal gene expression, however the precise mechanism responsible for embryonic patterning still needs elucidation. Auxin seems to be the main player which regulates embryo development and controls expression of various genes in a dose-dependent manner. Thus, local auxin maxima and minima which are provided by polar auxin transport underlie cell fate specification. Diverse auxin concentrations in various regions of an embryo would easily explain distinct cell identities, however the question about the mechanism of cellular patterning in cells exposed to similar auxin concentrations still remains open. Thus, specification of cell fate might result not only from the cell position within an embryo but also from events occurring before and during mitosis. This review presents the impact of auxin on the orientation of the cell division plane and discusses the mechanism of auxin-dependent cytoskeleton alignment. Furthermore, close attention is paid to auxin-induced calcium fluxes, which regulate the activity of MAPKs during postembryonic development and which possibly might also underlie cellular patterning during embryogenesis.
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Affiliation(s)
- Konrad Winnicki
- Department of Cytophysiology, Faculty of Biology and Environmental Protection, University of Lodz, 90-236 Lódź, Poland
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171
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Vatanpour N, Malvandi AM, Hedayati Talouki H, Gattinoni P, Scesi L. Impact of rapid urbanization on the surface water's quality: a long-term environmental and physicochemical investigation of Tajan river, Iran (2007-2017). ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:8439-8450. [PMID: 31902082 DOI: 10.1007/s11356-019-07477-w] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2019] [Accepted: 12/19/2019] [Indexed: 06/10/2023]
Abstract
Sustainable development of our society requires protection and monitoring of aquatic environments, as they are the pivotal water resources and niche for wildlife animals. In this research, physicochemical parameters of Tajan river's water were determined and compared with standards to assess the rural and human activity impact on water quality. First, monitoring and analyzing the water quality of the river were performed for 11 years (from 2007 to 2017). Based on calculated water quality index (WQI) values, Tajan river's water quality falls into four categories: good water with WQI less than 30 at upstream and middle of the river, poor water, and very poor to even unsuitable water (WQI ranges from 86 to 134) at the more urbanized locations. The high values of WQI are due to an elevated concentration of sulfate, nitrate, total dissolved solids (TDS), and chloride substances. The source of contaminations, according to the geochemistry of the area and having more than 90% growth rate in the population near to the most polluted location, is probably anthropogenic activities. Then, the long-term experimental data set has been utilized for developing a statistical model to be used for prediction of water quality with a few chemical analyses, generating a rapid and low-cost water quality evaluation for this river. The model was developed based on the stepwise multiple linear regression (MLR) approach and confirmed the experimental observation data of the most defective elements on WQI were respectively SO4, NO3, TDS, Cl, pH, and EC. This study presents a long-term evaluation of changes in surface water quality at a region with a recent rapid urban and civil development providing a suitable case to understand better human-water relations.
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Affiliation(s)
- Nahid Vatanpour
- Department of Civil and Environmental Engineering, Politecnico di Milano, Piazza Leonardo Da Vinci, 32, 20133, Milan, Italy.
| | - Amir Mohammad Malvandi
- Science and Technology Pole, IRCCS Multimedica, Via Gaudenzio Fantoli, 16/15, 20138, Milan, Italy
| | | | - Paola Gattinoni
- Department of Civil and Environmental Engineering, Politecnico di Milano, Piazza Leonardo Da Vinci, 32, 20133, Milan, Italy
| | - Laura Scesi
- Department of Civil and Environmental Engineering, Politecnico di Milano, Piazza Leonardo Da Vinci, 32, 20133, Milan, Italy
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172
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Montanha GS, Rodrigues ES, Marques JPR, de Almeida E, Dos Reis AR, Pereira de Carvalho HW. X-ray fluorescence spectroscopy (XRF) applied to plant science: challenges towards in vivo analysis of plants. Metallomics 2020; 12:183-192. [PMID: 31793600 DOI: 10.1039/c9mt00237e] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2023]
Abstract
X-ray fluorescence spectroscopy (XRF) is an analytical tool used to determine the elemental composition in a myriad of sample matrices. Due to the XRF non-destructive feature, this technique may allow time-resolved plant tissue analyses under in vivo conditions, and additionally, the combination with other non-destructive techniques. In this study, we employed handheld and benchtop XRF to evaluate the elemental distribution changes in living plant tissues exposed to X-rays, as well as real-time uptake kinetics of Zn(aq) and Mn(aq) in soybean (Glycine max (L.) Merrill) stem and leaves, for 48 hours, combined with transpiration rate assessment on leaves by an infrared gas analyzer (IRGA). We found higher Zn content than Mn in stems. The latter micronutrient, in turn, presented higher concentration in leaf veins. Besides, both micronutrients were more concentrated in the first trifolium (i.e., youngest leaf) of soybean plants. Moreover, the transpiration rate was more influenced by circadian cycles than Zn and Mn uptake. Thus, XRF represents a convenient tool for in vivo nutritional studies in plants, and it can be coupled successfully to other analytical techniques.
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Affiliation(s)
- Gabriel Sgarbiero Montanha
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Avenida Centenário, 303, Piracicaba, SP 13416000, Brazil.
| | - Eduardo Santos Rodrigues
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Avenida Centenário, 303, Piracicaba, SP 13416000, Brazil.
| | - João Paulo Rodrigues Marques
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Avenida Centenário, 303, Piracicaba, SP 13416000, Brazil.
| | - Eduardo de Almeida
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Avenida Centenário, 303, Piracicaba, SP 13416000, Brazil.
| | | | - Hudson Wallace Pereira de Carvalho
- Center for Nuclear Energy in Agriculture (CENA), University of São Paulo (USP), Avenida Centenário, 303, Piracicaba, SP 13416000, Brazil.
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173
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Wei D, Zhao XH. Calcium maintained higher quality and enhanced resistance against chilling stress by regulating enzymes in reactive oxygen and biofilm metabolism of Chinese winter jujube fruit. J Food Biochem 2020; 44:e13161. [PMID: 32037588 DOI: 10.1111/jfbc.13161] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Revised: 12/29/2019] [Accepted: 01/13/2020] [Indexed: 11/26/2022]
Abstract
The postharvest senescence of Chinese winter jujube fruit can be effectively delayed by refrigerated storage. However, chilling injury often occurs in jujube fruit during cold storage. In this study, Chinese winter jujubes were sprayed with CaCl2 (4%) 3 times at intervals of 2 hr on the day of refrigeration. The results presented that maximum difference of 2.7 N firmness, 3.42% TAC, and 0.8 OD280 /g polyphenol content were detected in calcium-treated fruit during cold storage, but the levels of O 2 - , MDA, hydrogen peroxide, browning rate, electrolyte leakage, and weight loss rate were significantly inhibited (p < .05). The maximum difference of enzymes activity of CAT, POD, SOD was 2.1, 10.8, and 40.6 mol h-1 kg-1 respectively, but 21.1 mol h-1 kg-1 PPO was restrained in the treated group. In conclusion, the results provided a reliable method for inhibiting cold injury and explained the internal molecular mechanism of the fruit regulated by calcium. PRACTICAL APPLICATIONS: Refrigerated storage is an important method for extending the storage time of Chinese winter jujube fruit. However, cold damage may occur when the jujubes are stored at low temperature for long-term. It is, therefore, of great significance to find a new method and reveal the molecular mechanism. We believe that our study makes a significant contribution to the literature because it provides an effective method of maintaining higher quality and mechanistic insights into the resistance against the chilling stress of jujubes.
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Affiliation(s)
- Deng Wei
- School of Food Engineering, Jilin Agriculture and Technology University, Jilin, P.R. China
| | - Xiu-Hong Zhao
- College of Grain Science and Technology, Shenyang Normal University, Shenyang, P.R. China
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174
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Liang C, Ma Y, Li L. Comparison of plasma membrane H +-ATPase response to acid rain stress between rice and soybean. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:6389-6400. [PMID: 31873880 DOI: 10.1007/s11356-019-07285-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2019] [Accepted: 12/03/2019] [Indexed: 06/10/2023]
Abstract
Acid rain is a global environmental issue due to inhibiting severely plant growth and productivity. To discover the tolerant mechanism in plants under acid rain stress, we studied the difference in response of two crops (rice and soybean) to simulated acid rain (pH 5.0 ~ 2.5) at growth and physiological, biochemical and molecular levels during exposure and recovery periods by hydroponics. By analyzing the change in relative growth rate, chlorophyll content and plasma permeability in rice and soybean, we found that rice could tolerate acid rain above pH 3.0 whereas soybean could tolerate acid rain above pH 4.5. By RT-PCR analyses, immunoprecipitation and enzyme kinetics study, we observed that pH 4.5 acid rain promoted the transcriptional expression of H+-ATPase genes and the phosphorylation of H+-ATPase and increased H+-ATPase activity in the two crops for resisting acid stress. The increased degree in soybean was larger than that in rice. Acid rain at pH 3.0 still promoted the transcription regulation to maintain H+-ATPase activity higher in rice for resisting stress but caused irreversible inhibition on express of H+-ATPase and decreased H+-ATPase activity in soybean. All results suggest that the different tolerance in rice and soybean to acid rain stress could be associated with difference in plasma membrane H+-ATPase at transcriptional regulation, post-translational modification and the substrate affinity.
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Affiliation(s)
- Chanjuan Liang
- State Key Laboratory of Food Science and Technology, Jiangnan University, Wuxi, 214122, China.
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China.
- Jiangsu Cooperative Innovation Center of Technology and Material of Water Treatment, Jiangnan University, Wuxi, 214122, China.
| | - Yongjia Ma
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China
| | - Lingrui Li
- Jiangsu Key Laboratory of Anaerobic Biotechnology, School of Environmental and Civil Engineering, Jiangnan University, Wuxi, 214122, China
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175
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Zhang M, Liu Y, He Q, Chai M, Huang Y, Chen F, Wang X, Liu Y, Cai H, Qin Y. Genome-wide investigation of calcium-dependent protein kinase gene family in pineapple: evolution and expression profiles during development and stress. BMC Genomics 2020; 21:72. [PMID: 31973690 PMCID: PMC6979071 DOI: 10.1186/s12864-020-6501-8] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2019] [Accepted: 01/16/2020] [Indexed: 11/25/2022] Open
Abstract
Background Calcium-dependent protein kinase (CPK) is one of the main Ca2+ combined protein kinase that play significant roles in plant growth, development and response to multiple stresses. Despite an important member of the stress responsive gene family, little is known about the evolutionary history and expression patterns of CPK genes in pineapple. Results Herein, we identified and characterized 17 AcoCPK genes from pineapple genome, which were unevenly distributed across eight chromosomes. Based on the gene structure and phylogenetic tree analyses, AcoCPKs were divided into four groups with conserved domain. Synteny analysis identified 7 segmental duplication events of AcoCPKs and 5 syntenic blocks of CPK genes between pineapple and Arabidopsis, and 8 between pineapple and rice. Expression pattern of different tissues and development stages suggested that several genes are involved in the functional development of plants. Different expression levels under various abiotic stresses also indicated that the CPK family underwent functional divergence during long-term evolution. AcoCPK1, AcoCPK3 and AcoCPK6, which were repressed by the abiotic stresses, were shown to be function in regulating pathogen resistance. Conclusions 17 AcoCPK genes from pineapple genome were identified. Our analyses provide an important foundation for understanding the potential roles of AcoCPKs in regulating pineapple response to biotic and abiotic stresses
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Affiliation(s)
- Man Zhang
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China
| | - Yanhui Liu
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China
| | - Qing He
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China
| | - Mengnan Chai
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China
| | - Youmei Huang
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China
| | - Fangqian Chen
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China
| | - Xiaomei Wang
- Horticulture Research Institute, Guangxi Academy of Agricultural Sciences, Nanning Investigation Station of South Subtropical Fruit Trees, Ministry of Agriculture, Nanning, 530007, China
| | - Yeqiang Liu
- Horticulture Research Institute, Guangxi Academy of Agricultural Sciences, Nanning Investigation Station of South Subtropical Fruit Trees, Ministry of Agriculture, Nanning, 530007, China
| | - Hanyang Cai
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China.
| | - Yuan Qin
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops; Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology; Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Center for Genomics and Biotechnology, College of Plant Protection, College of life science, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, 350002, Fujian Province, China. .,State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Lab of Sugarcane Biology, College of Agriculture, Guangxi University, Nanning, 530004, China.
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176
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Wen F, Ye F, Xiao Z, Liao L, Li T, Jia M, Liu X, Wu X. Genome-wide survey and expression analysis of calcium-dependent protein kinase (CDPK) in grass Brachypodium distachyon. BMC Genomics 2020; 21:53. [PMID: 31948407 PMCID: PMC6966850 DOI: 10.1186/s12864-020-6475-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2019] [Accepted: 01/09/2020] [Indexed: 12/05/2022] Open
Abstract
BACKGROUND Ca2+ played as a ubiquitous secondary messenger involved in plant growth, development, and responses to various environmental stimuli. Calcium-dependent protein kinases (CDPK) were important Ca2+ sensors, which could directly translate Ca2+ signals into downstream phosphorylation signals. Considering the importance of CDPKs as Ca2+ effectors for regulation of plant stress tolerance and few studies on Brachypodium distachyon were available, it was of interest for us to isolate CDPKs from B. distachyon. RESULTS A systemic analysis of 30 CDPK family genes in B. distachyon was performed. Results showed that all BdCDPK family members contained conserved catalytic Ser/Thr protein kinase domain, autoinhibitory domain, and EF-hand domain, and a variable N-terminal domain, could be divided into four subgroup (I-IV), based upon sequence homology. Most BdCDPKs had four EF-hands, in which EF2 and EF4 revealed high variability and strong divergence from EF-hand in AtCDPKs. Synteny results indicated that large number of syntenic relationship events existed between rice and B. distachyon, implying their high conservation. Expression profiles indicated that most of BdCDPK genes were involved in phytohormones signal transduction pathways and regulated physiological process in responding to multiple environmental stresses. Moreover, the co-expression network implied that BdCDPKs might be both the activator and the repressor involved in WRKY transcription factors or MAPK cascade genes mediated stress response processes, base on their complex regulatory network. CONCLUSIONS BdCDPKs might play multiple function in WRKY or MAPK mediated abiotic stresses response and phytohormone signaling transduction in B. distachyon. Our genomics analysis of BdCDPKs could provide fundamental information for further investigation the functions of CDPKs in integrating Ca2+ signalling pathways in response to environments stresses in B. distachyon.
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Affiliation(s)
- Feng Wen
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China.
| | - Feng Ye
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China
| | - Zhulong Xiao
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China
| | - Liang Liao
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China
| | - Tongjian Li
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China
| | - Mingliang Jia
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China
| | - Xinsheng Liu
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China
| | - Xiaozhu Wu
- School of Pharmacy and Life Science, Jiujiang University, Jiujiang, China.
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177
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Su W, Huang L, Ling H, Mao H, Huang N, Su Y, Ren Y, Wang D, Xu L, Muhammad K, Que Y. Sugarcane calcineurin B-like (CBL) genes play important but versatile roles in regulation of responses to biotic and abiotic stresses. Sci Rep 2020; 10:167. [PMID: 31932662 PMCID: PMC6957512 DOI: 10.1038/s41598-019-57058-7] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2019] [Accepted: 12/21/2019] [Indexed: 11/09/2022] Open
Abstract
Free calcium ions are common second messengers in plant cells. The calcineurin B-like protein (CBL) is a special calcium sensor that plays an important role in plant growth and stress response. In this study, we obtained three CBL genes (GenBank accession nos. KX013374, KX013375, and KX013376) from sugarcane variety ROC22. The open reading frames of ScCBL genes ranged from 642 to 678 base pairs in length and encoded polypeptides from 213 to 225 amino acids in length. ScCBL2-1, ScCBL3-1, and ScCBL4 were all located in the plasma membrane and cytoplasm. ScCBL2-1 and ScCBL3-1 expression was up-regulated by treatment with salicylic acid (SA), methyl jasmonate (MeJA), hydrogen peroxide (H2O2), polyethylene glycol (PEG), sodium chloride (NaCl), or copper chloride (CuCl2). ScCBL4 expression was down-regulated in response to all of these stresses (abscisic acid (ABA), SA, MeJA, and NaCl) except for H2O2, calcium chloride (CaCl2), PEG, and CuCl2. Expression in Escherichia coli BL21 cells showed that ScCBLs can enhance tolerance to NaCl or copper stress. Overexpression of ScCBLs in Nicotiana benthamiana leaves promoted their resistance to infection with the tobacco pathogen Ralstonia solanacearum. The results from the present study facilitate further research regarding ScCBL genes, and in particular, their roles in the response to various stresses in sugarcane.
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Affiliation(s)
- Weihua Su
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Long Huang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Hui Ling
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Huaying Mao
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Ning Huang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Yachun Su
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Yongjuan Ren
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Dongjiao Wang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Liping Xu
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Khushi Muhammad
- Department of Genetics, Hazara University, Mansehra, Pakistan
| | - Youxiong Que
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture/National Engineering Research Center for Sugarcane, Ministry of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
- Guangxi Collaborative Innovation Center of Sugarcane Industry, Guangxi University, Nanning, 530005, China.
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178
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Cao L, Zhang P, Lu X, Wang G, Wang Z, Zhang Q, Zhang X, Wei X, Mei F, Wei L, Wang T. Systematic Analysis of the Maize OSCA Genes Revealing ZmOSCA Family Members Involved in Osmotic Stress and ZmOSCA2.4 Confers Enhanced Drought Tolerance in Transgenic Arabidopsis. Int J Mol Sci 2020; 21:ijms21010351. [PMID: 31948071 PMCID: PMC6982122 DOI: 10.3390/ijms21010351] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Revised: 12/24/2019] [Accepted: 01/03/2020] [Indexed: 12/18/2022] Open
Abstract
OSCAs are hyperosmolality-gated calcium-permeable channel proteins. In this study, two co-expression modules, which are strongly associated with maize proline content, were screened by weighted correlation network analysis, including three ZmOSCA family members. Phylogenetic and protein domain analyses revealed that 12 ZmOSCA members were classified into four classes, which all contained DUF221 domain. The promoter region contained multiple core elements responsive to abiotic stresses and hormones. Colinear analysis revealed that ZmOSCAs had diversified prior to maize divergence. Most ZmOSCAs responded positively to ABA, PEG, and NaCl treatments. ZmOSCA2.3 and ZmOSCA2.4 were up-regulated by more than 200-fold under the three stresses, and showed significant positive correlations with proline content. Yeast two-hybrid and bimolecular fluorescence complementation indicated that ZmOSCA2.3 and ZmOSCA2.4 proteins interacted with ZmEREB198. Over-expression of ZmOSCA2.4 in Arabidopsis remarkably improved drought resistance. Moreover, over-expression of ZmOSCA2.4 enhanced the expression of drought tolerance-associated genes and reduced the expression of senescence-associated genes. We also found that perhaps ZmOSCA2.4 was regulated by miR5054.The results provide a high-quality molecular resource for selecting resistant breeding, and lay a foundation for elucidating regulatory mechanism of ZmOSCA under abiotic stresses.
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Affiliation(s)
- Liru Cao
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China; (L.C.); (P.Z.); (G.W.); (F.M.)
- Grain Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; (X.L.); (Z.W.); (Q.Z.); (X.Z.); (X.W.)
| | - Pengyu Zhang
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China; (L.C.); (P.Z.); (G.W.); (F.M.)
| | - Xiaomin Lu
- Grain Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; (X.L.); (Z.W.); (Q.Z.); (X.Z.); (X.W.)
| | - Guorui Wang
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China; (L.C.); (P.Z.); (G.W.); (F.M.)
| | - Zhenhua Wang
- Grain Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; (X.L.); (Z.W.); (Q.Z.); (X.Z.); (X.W.)
| | - Qianjin Zhang
- Grain Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; (X.L.); (Z.W.); (Q.Z.); (X.Z.); (X.W.)
| | - Xin Zhang
- Grain Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; (X.L.); (Z.W.); (Q.Z.); (X.Z.); (X.W.)
| | - Xin Wei
- Grain Crops Research Institute, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; (X.L.); (Z.W.); (Q.Z.); (X.Z.); (X.W.)
| | - Fujian Mei
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China; (L.C.); (P.Z.); (G.W.); (F.M.)
| | - Li Wei
- National Engineering Research Centre for Wheat, Zhengzhou 450002, China
- Correspondence: (L.W.); (T.W.)
| | - Tongchao Wang
- National Key Laboratory of Wheat and Maize Crop Science, College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China; (L.C.); (P.Z.); (G.W.); (F.M.)
- Correspondence: (L.W.); (T.W.)
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179
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Zheng Y, Zhan Q, Shi T, Liu J, Zhao K, Gao Y. The nuclear transporter SAD2 plays a role in calcium- and H 2 O 2 -mediated cell death in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 101:324-333. [PMID: 31565820 DOI: 10.1111/tpj.14544] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Revised: 07/31/2019] [Accepted: 09/10/2019] [Indexed: 05/19/2023]
Abstract
In response to pathogens, plant cells exhibit a rapid increase in the intracellular calcium concentration and a burst of reactive oxygen species (ROS). The cytosolic increase in Ca2+ and the accumulation of ROS are critical for inducing programmed cell death (PCD), but the molecular mechanism is not fully understood. We screened an Arabidopsis mutant, sad2-5, which harbours a T-DNA insertion in the 18th exon of the importin beta-like gene, SAD2. The H2 O2 -induced increase in the [Ca2+ ]cyt of the sad2-5 mutant was greater than that of the wild type, and the sad2-5 mutant showed clear cell death phenotypes and abnormal H2 O2 accumulation under fumonisin-B1 (FB1) treatment. CaCl2 could enhance the FB1-induced cell death of the sad2-5 mutant, whereas lanthanum chloride (LaCl3 ), a broad-spectrum calcium channel blocker, could restore the FB1-induced PCD phenotype of sad2-5. The sad2-5 fbr11-1 double mutant exhibited the same FB1-insensitive phenotype as fbr11-1, which plays a critical role in novo sphingolipid synthesis, indicating that SAD2 works downstream of FBR11. These results suggest the important role of nuclear transporters in calcium- and ROS-mediated PCD response as well as provide an important theoretical basis for further analysis of the molecular mechanism of SAD2 function in PCD and for improvement of the resistance of crops to adverse environments.
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Affiliation(s)
- Yuan Zheng
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng, 475001, China
| | - Qidi Zhan
- Key Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng, 475001, China
| | - Tiantian Shi
- National Key Facility for Crop Gene Resources and Genetic Improvement (NFCRI), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
| | - Jun Liu
- National Key Facility for Crop Gene Resources and Genetic Improvement (NFCRI), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
| | - Kaijun Zhao
- National Key Facility for Crop Gene Resources and Genetic Improvement (NFCRI), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
| | - Ying Gao
- National Key Facility for Crop Gene Resources and Genetic Improvement (NFCRI), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
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180
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Saito S, Uozumi N. Calcium-Regulated Phosphorylation Systems Controlling Uptake and Balance of Plant Nutrients. FRONTIERS IN PLANT SCIENCE 2020; 11:44. [PMID: 32117382 PMCID: PMC7026023 DOI: 10.3389/fpls.2020.00044] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Accepted: 01/14/2020] [Indexed: 05/18/2023]
Abstract
Essential elements taken up from the soil and distributed throughout the whole plant play diverse roles in different tissues. Cations and anions contribute to maintenance of intracellular osmolarity and the formation of membrane potential, while nitrate, ammonium, and sulfate are incorporated into amino acids and other organic compounds. In contrast to these ion species, calcium concentrations are usually kept low in the cytosol and calcium displays unique behavior as a cytosolic signaling molecule. Various environmental stresses stimulate increases in the cytosolic calcium concentration, leading to activation of calcium-regulated protein kinases and downstream signaling pathways. In this review, we summarize the stress responsive regulation of nutrient uptake and balancing by two types of calcium-regulated phosphorylation systems: CPK and CBL-CIPK. CPK is a family of protein kinases activated by calcium. CBL is a group of calcium sensor proteins that interact with CIPK kinases, which phosphorylate their downstream targets. In Arabidopsis, quite a few ion transport systems are regulated by CPKs or CBL-CIPK complexes, including channels/transporters that mediate transport of potassium (KAT1, KAT2, GORK, AKT1, AKT2, HAK5, SPIK), sodium (SOS1), ammonium (AMT1;1, AMT1;2), nitrate and chloride (SLAC1, SLAH2, SLAH3, NRT1.1, NRT2.4, NRT2.5), and proton (AHA2, V-ATPase). CPKs and CBL-CIPKs also play a role in C/N nutrient response and in acquisition of magnesium and iron. This functional regulation by calcium-dependent phosphorylation systems ensures the growth of plants and enables them to acquire tolerance against various environmental stresses. Calcium serves as the key factor for the regulation of membrane transport systems.
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Affiliation(s)
- Shunya Saito
- *Correspondence: Shunya Saito, ; Nobuyuki Uozumi,
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181
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Zhang Y, Zhou X, Liu S, Yu A, Yang C, Chen X, Liu J, Wang A. Identification and Functional Analysis of Tomato CIPK Gene Family. Int J Mol Sci 2019; 21:E110. [PMID: 31877938 PMCID: PMC6981861 DOI: 10.3390/ijms21010110] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2019] [Revised: 12/15/2019] [Accepted: 12/17/2019] [Indexed: 12/22/2022] Open
Abstract
The calcineurin B-like interacting protein kinase (CIPK) protein family is a critical protein family in plant signaling pathways mediated by Ca2+, playing a pivotal role in plant stress response and growth. However, to the best of our knowledge, no study of the tomato CIPK gene family in response to abiotic stress has been reported. In this study, 22 members of the tomato CIPK gene family were successfully identified by using a combination of bioinformatics techniques and molecular analyses. The expression level of each member of tomato CIPK gene family under abiotic stress (low temperature, high salt, drought treatment) was determined by qRT-PCR. Results indicated that tomato CIPK demonstrated different degrees of responding to various abiotic stresses, and changes in SlCIPK1 and SlCIPK8 expression level were relatively apparent. The results of qRT-PCR showed that expression levels of SlCIPK1 increased significantly in early stages of cold stress, and the expression level of SlCIPK8 increased significantly during the three treatments at different time points, implicating Solanum lycopersicum CIPK1(SlCIPK1) and Solanum lycopersicum CIPK8 (SlCIPK8) involvement in abiotic stress response. SlCIPK1 and SlCIPK8 were silenced using Virus-induced gene silencing (VIGS), and physiological indexes were detected by low temperature, drought, and high salt treatment. The results showed that plants silenced by SlCIPK1 and SlCIPK8 at the later stage of cold stress were significantly less resistant to cold than wild-type plants. SlCIPK1 and SlCIPK8 silenced plants had poor drought resistance, indicating a relationship between SlCIPK1 and SlCIPK8 with response to low temperature and drought resistance. This is the first study to uncover the nucleotide sequence for tomato CIPK family members and systematically study the changes of tomato CIPK family members under abiotic stress. Here, we investigate the CIPK family's response under abiotic stress providing understanding into the signal transduction pathway. This study provides a theoretical basis for elucidating the function of tomato CIPK at low temperature and its molecular mechanism of regulating low temperatures.
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Affiliation(s)
- Yao Zhang
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China; (Y.Z.); (X.Z.); (A.Y.)
| | - Xi’nan Zhou
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China; (Y.Z.); (X.Z.); (A.Y.)
| | - Siyuan Liu
- College of Plant Protection, China Agricultural University, Beijing 100000, China;
| | - Anzhou Yu
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China; (Y.Z.); (X.Z.); (A.Y.)
| | - Chuanming Yang
- College of Arts and Sciences, Northeast Agricultural University, Harbin 150030, China;
| | - Xiuling Chen
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China;
| | - Jiayin Liu
- College of Sciences, Northeast Agricultural University, Harbin 150030, China;
| | - Aoxue Wang
- College of Life Sciences, Northeast Agricultural University, Harbin 150030, China; (Y.Z.); (X.Z.); (A.Y.)
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin 150030, China;
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182
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Falcioni R, Moriwaki T, Perez-Llorca M, Munné-Bosch S, Gibin MS, Sato F, Pelozo A, Pattaro MC, Giacomelli ME, Rüggeberg M, Antunes WC. Cell wall structure and composition is affected by light quality in tomato seedlings. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2019; 203:111745. [PMID: 31931381 DOI: 10.1016/j.jphotobiol.2019.111745] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Revised: 11/22/2019] [Accepted: 12/13/2019] [Indexed: 12/27/2022]
Abstract
Light affects many aspects of cell development. Tomato seedlings growing at different light qualities (white, blue, green, red, far-red) and in the dark displayed alterations in cell wall structure and composition. A strong and negative correlation was found between cell wall thickness and hypocotyl growth. Cell walls was thicker under blue and white lights and thinner under far-red light and in the dark, while intermediate values was observed for red or green lights. Additionally, the inside layer surface of cell wall presented random deposited microfibrillae angles under far-red light and in the dark. However, longitudinal transmission electron microscopy indicates a high frequency of microfibrils close to parallels related to the elongation axis in the outer layer. This was confirmed by ultra-high resolution small angle X-ray scattering. These data suggest that cellulose microfibrils would be passively reoriented in the longitudinal direction. As the cell expands, the most recently deposited layers (inside) behave differentially oriented compared to older (outer) layers in the dark or under FR lights, agreeing with the multinet growth hypothesis. High Ca and pectin levels were found in the cell wall of seedlings growing under blue and white light, also contributing to the low extensibility of the cell wall. Low Ca and pectin contents were found in the dark and under far-red light. Auxins marginally stimulated growth in thin cell wall circumstances. Hypocotyl growth was stimulated by gibberellins under blue light.
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Affiliation(s)
- Renan Falcioni
- Plant Ecophysiology Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil; Plant Biochemistry Laboratory, Department of Biochemistry, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Thaise Moriwaki
- Plant Ecophysiology Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Marina Perez-Llorca
- Antiox Research Group, Department of Evolutionary Biology, Ecology and Environmental Sciences, Facultat de Biologia, Universitat de Barcelona, Avinguda Diagonal, 645, 08028 Barcelona, Spain
| | - Sergi Munné-Bosch
- Antiox Research Group, Department of Evolutionary Biology, Ecology and Environmental Sciences, Facultat de Biologia, Universitat de Barcelona, Avinguda Diagonal, 645, 08028 Barcelona, Spain
| | - Mariana Sversut Gibin
- Optical Spectroscopy and Thermophysical Properties Research Group, Department of Physics, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Francielle Sato
- Optical Spectroscopy and Thermophysical Properties Research Group, Department of Physics, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Andressa Pelozo
- Plant Ecophysiology Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil; Plant Anatomy Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Mariana Carmona Pattaro
- Plant Ecophysiology Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Marina Ellen Giacomelli
- Plant Ecophysiology Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil
| | - Markus Rüggeberg
- Wood Material Science, Institute for Building Materials, Swiss Federal Institute of Technology Zurich (ETH Zurich), Schafmattstrasse 6, CH-8093 Zurich, Switzerland
| | - Werner Camargos Antunes
- Plant Ecophysiology Laboratory, Department of Biology, State University of Maringá, Av. Colombo, 5790, 87020-900 Maringá, Paraná, Brazil.
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183
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Huang J, Liu W, Li S, Song L, Lu H, Shi X, Chen X, Hu T, Liu S, Liu T. Ecological stoichiometry of the epiphyte community in a subtropical forest canopy. Ecol Evol 2019; 9:14394-14406. [PMID: 31938527 PMCID: PMC6953686 DOI: 10.1002/ece3.5875] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 10/31/2019] [Accepted: 11/04/2019] [Indexed: 11/06/2022] Open
Abstract
Epiphytes in tree canopies make a considerable contribution to the species diversity, aboveground biomass, and nutrient pools in forest ecosystems. However, the nutrient status of epiphytes and their possible adaptations to nutrient deficiencies in the forest canopy remain unclear. Therefore, we analyzed the stoichiometry of five macroelements (C, N, P, K, and Ca) in four taxonomic groups (lichens, bryophytes, ferns, and spermatophytes) to investigate this issue in a subtropical montane moist evergreen broad-leaved forest in Southwest China. We found that the interspecific variations in element concentrations and mass ratios were generally greater than the intraspecific variations. And there were significant stoichiometric differences among functional groups. Allometric relationships between N and P across the epiphyte community indicated that P might be in greater demand than N with an increase in nutrients. Although canopy nutrients were deficient, most epiphytes could still maintain high N and P concentrations and low N:P ratios. Moreover, ferns and spermatophytes allocated more limited nutrients to leaves than to stems and roots. To alleviate frequent drought stress in the forest canopy, vascular epiphytes maintained several times higher K concentrations in their leaves than in the tissues of lichens and bryophytes. Our results suggest that epiphytes may have evolved specific nutrient characteristics and adaptations, so that they can distribute in heterogeneous canopy habitats and maintain the stability of nutrient metabolism.
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Affiliation(s)
- Jun‐Biao Huang
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- University of Chinese Academy of SciencesBeijingChina
| | - Wen‐Yao Liu
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- Center of Plant EcologyCore Botanical GardensChinese Academy of SciencesXishuangbannaChina
| | - Su Li
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- Center of Plant EcologyCore Botanical GardensChinese Academy of SciencesXishuangbannaChina
| | - Liang Song
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- Center of Plant EcologyCore Botanical GardensChinese Academy of SciencesXishuangbannaChina
| | - Hua‐Zheng Lu
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- Center of Plant EcologyCore Botanical GardensChinese Academy of SciencesXishuangbannaChina
| | - Xian‐Meng Shi
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- University of Chinese Academy of SciencesBeijingChina
| | - Xi Chen
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- University of Chinese Academy of SciencesBeijingChina
| | - Tao Hu
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- University of Chinese Academy of SciencesBeijingChina
| | - Shuai Liu
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- University of Chinese Academy of SciencesBeijingChina
| | - Tao Liu
- CAS Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglaChina
- University of Chinese Academy of SciencesBeijingChina
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184
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González-Orenga S, Ferrer-Gallego PP, Laguna E, López-Gresa MP, Donat-Torres MP, Verdeguer M, Vicente O, Boscaiu M. Insights on Salt Tolerance of Two Endemic Limonium Species from Spain. Metabolites 2019; 9:E294. [PMID: 31795424 PMCID: PMC6950247 DOI: 10.3390/metabo9120294] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2019] [Revised: 11/23/2019] [Accepted: 11/27/2019] [Indexed: 11/24/2022] Open
Abstract
We have analysed the salt tolerance of two endemic halophytes of the genus Limonium, with high conservation value. In the present study, seed germination and growth parameters as well as different biomarkers-photosynthetic pigments, mono and divalent ion contents-associated to salt stress were evaluated in response to high levels of NaCl. The study was completed with an untargeted metabolomics analysis of the primary compounds including carbohydrates, phosphoric and organic acids, and amino acids, identified by using a gas chromatography and mass spectrometry platform. Limonium albuferae proved to be more salt-tolerant than L. doufourii, both at the germination stage and during vegetative growth. The degradation of photosynthetic pigments and the increase of Na+/K+ ratio under salt stress were more accentuated in the less tolerant second species. The metabolomics analysis unravelled several differences between the two species. The higher salt tolerance of L. albuferae may rely on its specific accumulation of fructose and glucose under high salinity conditions, the first considered as a major osmolyte in this genus. In addition, L. albuferae showed steady levels of citric and malic acids, whereas the glutamate family pathway was strongly activated under stress in both species, leading to the accumulation of proline (Pro) and γ-aminobutyric acid (GABA).
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Affiliation(s)
- Sara González-Orenga
- Instituto Agroforestal Mediterráneo (IAM), Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain; (S.G.-O.); (M.V.)
| | - P. Pablo Ferrer-Gallego
- Centro para la Investigación y Experimentación Forestal, CIEF-Wildlife Service, Generalitat Valenciana, Avda Comarques del País Valencia,114, 46930 Quart de Poblet, Valencia, Spain; (P.P.F.-G.); (E.L.)
| | - Emilio Laguna
- Centro para la Investigación y Experimentación Forestal, CIEF-Wildlife Service, Generalitat Valenciana, Avda Comarques del País Valencia,114, 46930 Quart de Poblet, Valencia, Spain; (P.P.F.-G.); (E.L.)
| | - M. Pilar López-Gresa
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València - Consejo Superior de Investigaciones Científicas (CSIC), Camino de Vera s/n, 46022 Valencia, Spain;
| | - Maria P. Donat-Torres
- Instituto de Investigación para la Gestión Integrada de Zonas Costeras. (IGIC), Universidad Politècnica de València. C/ Paranimf 1, 46730 Gandia, Valencia, Spain;
| | - Mercedes Verdeguer
- Instituto Agroforestal Mediterráneo (IAM), Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain; (S.G.-O.); (M.V.)
| | - Oscar Vicente
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana (COMAV), Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain;
| | - Monica Boscaiu
- Instituto Agroforestal Mediterráneo (IAM), Universitat Politècnica de València, Camino de Vera s/n, 46022 Valencia, Spain; (S.G.-O.); (M.V.)
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185
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Podar D, Macalik K, Réti KO, Martonos I, Török E, Carpa R, Weindorf DC, Csiszár J, Székely G. Morphological, physiological and biochemical aspects of salt tolerance of halophyte Petrosimonia triandra grown in natural habitat. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:1335-1347. [PMID: 31736538 PMCID: PMC6825091 DOI: 10.1007/s12298-019-00697-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Revised: 07/03/2019] [Accepted: 07/30/2019] [Indexed: 06/10/2023]
Abstract
Salt tolerance mechanisms of halophyte Petrosimonia triandra, growing in its natural habitat in Cluj County, Romania, were investigated via biomass, growth parameters, water status, ion content, photosynthetic and antioxidative system efficiency, proline accumulation and lipid degradation. Two sampling sites with different soil electrical conductivities were selected: site 1: 3.14 dS m-1 and site 2: 4.45 dS m-1. Higher salinity proved to have a positive effect on growth. The relative water content did not decline severely, Na+ and K+ content of the roots, stem and leaves was more, and the functions of the photosynthetic apparatus and photosynthetic pigment contents were not altered. The efficiency of the antioxidative defence system was found to be assured by coordination of several reactive oxygen species scavengers. The presence of higher salinity led to accumulation of the osmolyte proline, while degradation of membrane lipids was reduced. As a whole, P. triandra evolved different adaptational strategies to counteract soil salinity, including morphological and physiological adaptations, preservation of photosynthetic activity, development of an efficient antioxidative system and accumulation of the osmotic compound, proline.
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Affiliation(s)
- Dorina Podar
- Department of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania
- Centre of Systemic Biology, Biodiversity and Bioresources, Babeş-Bolyai University, 5-7 Clinicilor St., Cluj-Napoca, Romania
| | - Kunigunda Macalik
- Hungarian Department of Biology and Ecology, Faculty of Biology and Geology, Babeş-Bolyai University, 5-7 Clinicilor St., 400006 Cluj-Napoca, Romania
| | - Kinga-Olga Réti
- Faculty of Environmental Science and Engineering, Babeş-Bolyai University, 30 Fântânele St., 400294 Cluj-Napoca, Romania
| | - Ildikó Martonos
- Faculty of Environmental Science and Engineering, Babeş-Bolyai University, 30 Fântânele St., 400294 Cluj-Napoca, Romania
| | - Edina Török
- MTA ÖK Lendület Landscape and Conservation Ecology Research Group, MTA Centre for Ecological Research, 2-4 Alkotmány St., Vácrátót, 2163 Hungary
| | - Rahela Carpa
- Department of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, 1 Kogălniceanu St., 400084 Cluj-Napoca, Romania
| | - David C. Weindorf
- Department of Plant and Soil Science, Texas Tech University, Lubbock, TX USA
| | - Jolán Csiszár
- Department of Plant Biology, Faculty of Science and Informatics, University of Szeged, 52 Közép fasor St., Szeged, 6726 Hungary
| | - Gyöngyi Székely
- Hungarian Department of Biology and Ecology, Faculty of Biology and Geology, Babeş-Bolyai University, 5-7 Clinicilor St., 400006 Cluj-Napoca, Romania
- Centre of Systemic Biology, Biodiversity and Bioresources, Babeş-Bolyai University, 5-7 Clinicilor St., Cluj-Napoca, Romania
- Institute for Research-Development-Innovation in Applied Natural Sciences, Babeş-Bolyai University, 30 Fântânele St., 400294 Cluj-Napoca, Romania
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186
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Liu Y, Riaz M, Yan L, Zeng Y, Cuncang J. Boron and calcium deficiency disturbing the growth of trifoliate rootstock seedlings (Poncirus trifoliate L.) by changing root architecture and cell wall. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 144:345-354. [PMID: 31622937 DOI: 10.1016/j.plaphy.2019.10.007] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Revised: 10/05/2019] [Accepted: 10/05/2019] [Indexed: 05/12/2023]
Abstract
Boron (B) and calcium (Ca) are essential elements for plant growth. Both deficiencies inhibit root growth. However, the mechanism of inhibition is not well clear. Morphological characteristics of roots and changes in root cell wall grown at different B and Ca deficiencies were examined by using a hydroponic culture system. Both B and Ca deficiencies caused reduced plant biomass and root growth. Ca deficiency significantly decreased the fresh weight of root, stem, and leaves by 47%, 50%, and 62%, respectively, while B deficiency only reduced root fresh weight. The PCA combined with Pearson correlation analysis showed that there was significant different correlation among root parameters under B and Ca deficiency treatments when compared to control. The results of observation of transmission electron microscope showed that Ca deficiency reduced but B deprivation increased the thickness of the cell wall. Combining these technologies like X-ray diffraction, fourier transform infrared spectroscopy, homogalacturonan epitopes (JIM5 and JIM7), we confirmed that those changes above may be due to different changes in the degree of methyl esterification of pectin and glycoprotein of the cell wall. Taken together, we concluded that B deficiency can promote the formation of more low methyl esterified pectin to increase cell wall thickness, and then affect the morphological development of root system, while the formation of more highly methyl esterified pectin to increase cell wall degradation under Ca deficiency, which inhibited root elongation and formation of root branches.
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Affiliation(s)
- Yalin Liu
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Muhammad Riaz
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Lei Yan
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Yu Zeng
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China
| | - Jiang Cuncang
- Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, Wuhan, Hubei, 430070, PR China.
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187
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Feng K, Ni C, Yu L, Zhou W, Li X. Synthesis and antifouling evaluation of indole derivatives. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2019; 182:109423. [PMID: 31325810 DOI: 10.1016/j.ecoenv.2019.109423] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2019] [Revised: 07/02/2019] [Accepted: 07/05/2019] [Indexed: 06/10/2023]
Abstract
Indole derivatives derived from the secondary metabolites of marine organisms possess the excellent antifouling property to inhibit the biofouling. These compounds and their analogues are simple in structure and have been proven to have low toxicity and bioaccumulation. Therefore, the active indole antifoulants are expected to replace the potentially toxic antifoulants which are widely used in current antifouling coatings. Seven indole derivatives were synthesized via the Friedel-Crafts alkylation reaction and were characterized by IR spectra, 1H NMR, 13C NMR and elemental analysis. Inhibition experiments against marine algae and bacteria were conducted, and the partial inhibition rates of algae and bacteria were more than 90%. This outcome indicates that indole derivatives possess excellent properties suitable for use as targeting anti-fouling compound for algae and bacteria. Non-invasive Micro-test Technology (NMT) reveals that the Ca2+ efflux of Platymonas subcordiformis dramatically increased in the presence of indole derivatives, which is inferred to be the molecular mechanism for inhibiting the growth of marine algae. The antifouling coatings containing indole derivatives were prepared and subjected to an antifouling test in a marine environment, and the results show that N-(1-H-5-bromo-indole-3-ylmethyl) benzamide and N-(1-H-2-phenyl-indole-3-ylmethyl) benzamide possess better antifouling performance compared to copper pyrithione (CuPT). According to these results, indole derivatives in this study might become novel and promising antifoulants.
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Affiliation(s)
- Kang Feng
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao, 266003, China
| | - Chunhua Ni
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao, 266003, China
| | - Liangmin Yu
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao, 266003, China; Open Studio for Marine Corrosion and Protection, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China
| | - Wenjun Zhou
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao, 266003, China
| | - Xia Li
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao, 266003, China; Open Studio for Marine Corrosion and Protection, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao, 266237, China.
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188
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Severe Water Deficiency during the Mid-Vegetative and Reproductive Phase has Little Effect on Proso Millet Performance. WATER 2019. [DOI: 10.3390/w11102155] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Climate change can result in extreme droughts, significantly affecting crop production. C4 crop proso millet (Panicum miliaceum L.) has the lowest water consumption among all of the cereal crops. Understanding its survival mechanisms is thus crucial for agriculture. Furthermore, yield reduction does not only occur directly due to water shortage, but is also a consequence of an impaired element uptake during drought. This study aimed to examine the effect of water deficiency on proso millet leaf traits, plant biomass partition, and yield. In addition, leaf element contents were analysed, including silicon, which is an important multifunctional element for grasses. The majority of the measured parameters showed little change from the control to the moderate and severe water shortage treatments, even though the soil moisture levels differed significantly. The most pronounced reduction in comparison to the control was for leaf biomass, leaf stomatal conductance, and leaf silicon, phosphorus, calcium, and sulphur contents. Conversely, an increase was obtained for leaf potassium and chlorine contents. Panicle biomass was the same for all plant groups. Leaf silicon was positively correlated to reflectance in the UV region, while leaf calcium was negatively correlated to reflectance in the visible regions, which might prevent damage due to short-wave UV radiation and provide sufficient visible light for photosynthesis. The efficient light and water management, reduction of leaf biomass, and same-sized root system may be the mechanisms that mitigate the negative effects of water shortage in proso millet.
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189
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Cotrim MF, da Silva JB, Lourenço FMDS, Teixeira AV, Gava R, Alves CZ, Candido ACDS, Campos CNS, Pereira MD, Torres SB, Bacchetta G, Teodoro PE. Studying the link between physiological performance of Crotalaria ochroleuca and the distribution of Ca, P, K and S in seeds with X-ray fluorescence. PLoS One 2019; 14:e0222987. [PMID: 31557223 PMCID: PMC6762162 DOI: 10.1371/journal.pone.0222987] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Accepted: 09/11/2019] [Indexed: 12/13/2022] Open
Abstract
This study describes the use of X-ray fluorescence spectroscopy in Crotalaria ochroleuca seed technology. This work evaluated X-ray fluorescence techniques to estimate the physiological performance of different C. ochroleuca seed coat colours based on the concentration and distribution of Ca, P, K, and S in seed structures. The treatments consisted of seeds separated by coat colours (yellow, green, and red) and a control treatment (colour mix according to their natural occurrence in commercial lots), and was carried out in a completely randomized design, with four replications. The physiological performance was evaluated by analyzing the water content, germination, first germination count, germination speed index, electrical conductivity, seedling emergence, and seedling length and dry mass. X-ray fluorescence spectroscopy techniques were carried out with quantitative analyses (Ca, P, K, and S concentration in the seed coat and the whole seed) and qualitative analyses (macronutrient mapping). The EDXRF and μ-XRF techniques are efficient and promising to differentiate the physiological performance of C. ochroleuca seeds, based on the concentration and distribution of Ca, P, K, and S in different structures. Ca is predominant in the seed coat, and K, S, and P are found throughout the embryonic axis. Seeds of yellow and green coats have higher nutrients concentration and distribution in the embryonic axis, revealing high germinative capacity and physiological performance. Seeds of red coat have higher nutrients concentration in the seed coat and lower assimilation, showing less vigour, which interferes directly in the quality of commercial lots.
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Affiliation(s)
| | | | | | | | - Ricardo Gava
- Federal University of Mato Grosso do Sul—UFMS, Chapadão do Sul, MS, Brazil
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190
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Cotruvo JA. The Chemistry of Lanthanides in Biology: Recent Discoveries, Emerging Principles, and Technological Applications. ACS CENTRAL SCIENCE 2019; 5:1496-1506. [PMID: 31572776 PMCID: PMC6764073 DOI: 10.1021/acscentsci.9b00642] [Citation(s) in RCA: 122] [Impact Index Per Article: 24.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Indexed: 05/18/2023]
Abstract
The essential biological role of rare earth elements lay hidden until the discovery in 2011 that lanthanides are specifically incorporated into a bacterial methanol dehydrogenase. Only recently has this observation gone from a curiosity to a major research area, with the appreciation for the widespread nature of lanthanide-utilizing organisms in the environment and the discovery of other lanthanide-binding proteins and systems for selective uptake. While seemingly exotic at first glance, biological utilization of lanthanides is very logical from a chemical perspective. The early lanthanides (La, Ce, Pr, Nd) primarily used by biology are abundant in the environment, perform similar chemistry to other biologically useful metals and do so more efficiently due to higher Lewis acidity, and possess sufficiently distinct coordination chemistry to allow for selective uptake, trafficking, and incorporation into enzymes. Indeed, recent advances in the field illustrate clear analogies with the biological coordination chemistry of other metals, particularly CaII and FeIII, but with unique twists-including cooperative metal binding to magnify the effects of small ionic radius differences-enabling selectivity. This Outlook summarizes the recent developments in this young but rapidly expanding field and looks forward to potential future discoveries, emphasizing continuity with principles of bioinorganic chemistry established by studies of other metals. We also highlight how a more thorough understanding of the central chemical question-selective lanthanide recognition in biology-may impact the challenging problems of sensing, capture, recycling, and separations of rare earths.
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Affiliation(s)
- Joseph A. Cotruvo
- Department of Chemistry, The Pennsylvania State
University, University Park, Pennsylvania 16802, United
States
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191
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Feng K, Ni C, Yu L, Zhou W, Li X. Synthesis and evaluation of acrylate resins suspending indole derivative structure in the side chain for marine antifouling. Colloids Surf B Biointerfaces 2019; 184:110518. [PMID: 31581054 DOI: 10.1016/j.colsurfb.2019.110518] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Revised: 09/18/2019] [Accepted: 09/20/2019] [Indexed: 12/13/2022]
Abstract
A novel indole derivative (N-(1H-2-phenyl-indole-3-ylmethyl) acrylamide, NPI) synthesized by a Friedel-Crafts alkylation reaction was identified using IR spectroscopy, 1H NMR, 13C NMR and elemental analysis. The inhibitory effect of this novel indole derivative on bacteria and marine algae was studied. The results showed that the inhibition ratios of the indole derivative against Escherichia coli and Staphylococcus aureus were 95.93% and 94.91%, respectively, and the indole derivative possessed prominent inhibitory activity against Phaeodactylum tricornutum, Nitzschia Closterium and Skeletonema costatum. These findings indicate that the indole derivative has high biological activity. Subsequently, the indole derivative was introduced to acrylate resins by free-radical polymerization. The resulting acrylate resins were subjected to self-polishing, anti-algal and antifouling test, the results of which indicated that acrylate resins containing the synthesized indole derivative could exhibit significant antifouling properties because of the combination of the biofouling resistance of the indole derivative and the self-polishing properties of acrylate. This work provides an academic foundation for studying environmentally friendly and highly efficient antifouling coatings.
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Affiliation(s)
- Kang Feng
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao 266003, China
| | - Chunhua Ni
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao 266003, China
| | - Liangmin Yu
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao 266003, China; Open Studio for Marine Corrosion and Protection, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China
| | - Wenjun Zhou
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao 266003, China
| | - Xia Li
- Key Laboratory of Marine Chemistry Theory and Technology, Ministry of Education, Ocean University of China, Qingdao 266003, China; Open Studio for Marine Corrosion and Protection, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266237, China.
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192
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Dogra N, Yadav R, Kaur M, Adhikary A, Kumar S, Ramakrishna W. Nutrient enhancement of chickpea grown with plant growth promoting bacteria in local soil of Bathinda, Northwestern India. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:1251-1259. [PMID: 31564786 PMCID: PMC6745584 DOI: 10.1007/s12298-019-00661-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2018] [Revised: 12/30/2018] [Accepted: 03/26/2019] [Indexed: 05/27/2023]
Abstract
Plant growth promoting bacteria (PGPB) enhance crop productivity as part of green technology to reduce the use of chemical fertilizers. They also have the capability to enhance macro- and micronutrient content of plants. In the present study, PGPB isolates belonging to Pseudomonas citronellis (PC), Pseudomonas sp. RA6, Serratia sp. S2, Serratia marcescens CDP13, and Frateuria aurantia (Symbion-K) were tested on two chickpea varieties, PBG1 and PBG5 grown for 30 days in local soil from Bathinda region in Northwestern India. PC and CDP13 were found to be better chickpea growth stimulators compared to the commercial Symbion-K based on shoot length and biomass. Most PGPB enhanced macro- and micronutrients in shoots to varying degrees compared to the control. PBG5 gave better response compared to PBG1 with reference to plant growth attributes and enhancement of the macronutrients, calcium, nitrogen and phosphorus and micronutrients, boron, copper, iron, and zinc. PBG5 is a high yielding variety with better resistance compared to PBG1. Overall, PGPB isolated from the local soil and PGPB from other parts of India were shown to be useful for enhancement of nutrient content and plant growth.
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Affiliation(s)
- Nitin Dogra
- Department of Biochemistry and Microbial Sciences, Central University of Punjab, Bathinda, India
| | - Radheshyam Yadav
- Department of Biochemistry and Microbial Sciences, Central University of Punjab, Bathinda, India
| | - Manpreet Kaur
- Department of Biochemistry and Microbial Sciences, Central University of Punjab, Bathinda, India
| | - Arindam Adhikary
- Department of Plant Sciences, Central University of Punjab, Bathinda, India
| | - Sanjeev Kumar
- Department of Plant Sciences, Central University of Punjab, Bathinda, India
| | - Wusirika Ramakrishna
- Department of Biochemistry and Microbial Sciences, Central University of Punjab, Bathinda, India
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193
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Chatzigianni M, Ntatsi G, Theodorou M, Stamatakis A, Livieratos I, Rouphael Y, Savvas D. Functional Quality, Mineral Composition and Biomass Production in Hydroponic Spiny Chicory ( Cichorium spinosum L.) Are Modulated Interactively by Ecotype, Salinity and Nitrogen Supply. FRONTIERS IN PLANT SCIENCE 2019; 10:1040. [PMID: 31555310 PMCID: PMC6727868 DOI: 10.3389/fpls.2019.01040] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2018] [Accepted: 07/26/2019] [Indexed: 06/10/2023]
Abstract
The hydroponic cultivation of spiny chicory (Cichorium spinosum L.), also known as stamnagathi, allows the development of year-round production. In the current study, two contrasting stamnagathi ecotypes originating from a montane and a coastal-marine habitat were supplied with nutrient solution containing 4 or 16 mM total-N in combination with 0.3, 20, or 40 mM NaCl. The primary aim of the experiment was to provide insight into salinity tolerance and nutrient needs in the two ecotypes, thereby contributing to breeding of more resilient cultivars to salinity and nutrient stress. Nutritional qualities of the stamnagathi genotypes were also tested. The coastal-marine ecotype was more salt tolerant in terms of fresh shoot biomass production and contained significantly more water and macro- and micro-nutrients in the shoot per dry weight unit. The root Na+ concentration was markedly lower in the coastal-marine compared to the montane ecotype. The leaf Na+ concentration was similar in both ecotypes at external NaCl concentrations up to 20 mM, but significantly higher in the montane compared to the coastal-marine ecotype at 40 mM NaCl. However, the leaf Cl- concentration was consistently higher in the coastal-marine than in the montane ecotype within each salinity level. The marine ecotype also exhibited significantly less total phenols, carotenoids, flavonoids, and chlorophyll compared to the montane ecotype across all treatments. Integrating all findings, it appears that at moderate salinity levels (20 mM), the higher salt tolerance of the coastal-marine ecotype is associated with mechanisms mitigating Na+ and Cl- toxicity within the leaf tissues, such as salt dilution imposed through increased leaf succulence. Nevertheless, at high external NaCl levels, Na+ exclusion may also contribute to enhanced salt tolerance of stamnagathi. Both ecotypes exhibited a high N-use efficiency, as their shoot biomass was not restricted when the total-N supply varied from 16 to 4 mM. The leaf organic-N was not influenced by salinity, while the interaction ecotype × N-supply-level was insignificant, indicating that the mechanisms involved in the salt tolerance difference between the two ecotypes was not linked with N-acquisition or -assimilation within the plant. The current results indicate that both ecotypes are promising germplasm resources for future breeding programs.
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Affiliation(s)
- Martina Chatzigianni
- Department of Crop Science, Laboratory of Vegetable Crops, Agricultural University of Athens, Athens, Greece
- Department of Sustainable Agriculture, Laboratory of Soil Science and Plant Diagnostics, Mediterranean Agronomic Institute of Chania, Chania, Greece
| | - Georgia Ntatsi
- Department of Crop Science, Laboratory of Vegetable Crops, Agricultural University of Athens, Athens, Greece
- Institute of Plant Breeding and Genetic Resources ELGO-DEMETER, Thessaloniki, Greece
| | - Maria Theodorou
- Department of Sustainable Agriculture, Laboratory of Soil Science and Plant Diagnostics, Mediterranean Agronomic Institute of Chania, Chania, Greece
| | - Aristidis Stamatakis
- Department of Sustainable Agriculture, Laboratory of Soil Science and Plant Diagnostics, Mediterranean Agronomic Institute of Chania, Chania, Greece
| | - Ioannis Livieratos
- Department of Sustainable Agriculture, Laboratory of Soil Science and Plant Diagnostics, Mediterranean Agronomic Institute of Chania, Chania, Greece
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Dimitrios Savvas
- Department of Crop Science, Laboratory of Vegetable Crops, Agricultural University of Athens, Athens, Greece
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194
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Li YH, Yu XZ, Mo LY, Lin YJ, Zhang Q. Involvement of glutamate receptors in regulating calcium influx in rice seedlings under Cr exposure. ECOTOXICOLOGY (LONDON, ENGLAND) 2019; 28:650-657. [PMID: 31197614 DOI: 10.1007/s10646-019-02062-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 05/30/2019] [Indexed: 06/09/2023]
Abstract
Glutamate receptors (GLRs) are ligand-gated Ca2+-permeable channels that govern and modulate the dynamic influx of cytosolic Ca2+ in plants. The present study investigated the interaction of OsGLR3 gene expression with subcellular Ca distribution in rice seedlings exposed to chromium (Cr) solution containing Cr(III) or Cr(VI). The results displayed that the accumulation of Ca was evaluated or higher in shoots compared to roots under Cr exposure, and a similar pattern of subcellular Ca distribution was observed between rice tissues exposed to Cr(III) and Cr(VI). Real-time quantitative polymerase chain reaction (qRT-PCR) analysis revealed that eight OsGLR3 isogenes were distinctly expressed in different rice tissues at different levels of Cr exposures. This differential expressions could possible be due to the uptake variations, subcellular distribution and chemical speciation of the two Cr species. Notably, distinct expression patterns of OsGLR3 genes were found between Cr(III) and Cr(VI) exposures, suggesting that different regulation strategies are used to mediate Ca influx in rice materials under different Cr exposures. These results demonstrated a full picture of Cr-induced transcriptional alterations in OsGLR3 expression levels in rice seedlings, and provided suggestive evidence for further investigation on specific OsGLR3 genes participated in the regulation of cytosolic Ca2+ concentrations under Cr exposure.
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Affiliation(s)
- Yan-Hong Li
- College of Environmental Science & Engineering, Guilin University of Technology, 541004, Guilin, China
| | - Xiao-Zhang Yu
- College of Environmental Science & Engineering, Guilin University of Technology, 541004, Guilin, China.
| | - Ling-Yun Mo
- College of Environmental Science & Engineering, Guilin University of Technology, 541004, Guilin, China
| | - Yu-Juan Lin
- College of Environmental Science & Engineering, Guilin University of Technology, 541004, Guilin, China
| | - Qing Zhang
- College of Environmental Science & Engineering, Guilin University of Technology, 541004, Guilin, China
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195
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Šípošová K, Kollárová K, Lišková D, Vivodová Z. The effects of IBA on the composition of maize root cell walls. JOURNAL OF PLANT PHYSIOLOGY 2019; 239:10-17. [PMID: 31177026 DOI: 10.1016/j.jplph.2019.04.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Revised: 04/03/2019] [Accepted: 04/08/2019] [Indexed: 05/13/2023]
Abstract
Auxin is one of the crucial plant hormones which stimulates and controls cell and plant growth. The effects of auxin IBA (indole-3-butyric acid) during 10-days on maize plants growth in controlled conditions (hydroponic, 16-h photoperiod, 70% humidity, 25/20 °C temperature), depended on its concentration in the substrate. A high concentration (10-7 M) of IBA inhibited root growth, evoked the development of apoplasmic barriers (Casparian bands and suberin lamellae) closer to the root apex, and elevated the amount of lignin in roots. A low concentration (10-11 M) of IBA stimulated root growth but affected neither the development of apoplasmic barriers, nor the amount of lignin. Auxin in a 10-8 M concentration influenced the root growth to a minimal extent compare to the control, and it was the non-effective concentration. Plant cell walls as cell structures ensure cell enlargement and plant growth, and have to react to auxin stimulus by modification of their components. We found the most significant changes in the composition of the PF III fraction (lignocellulosic complex) of the cell wall. The presence of auxin in the substrate affected all three components of this fraction - Klason lignin and both the by acid (2 M TFA) non-hydrolysable and the hydrolysable parts of this complex. The ratio of the non-hydrolysable part to the Klason lignin increased from 1.3 to 3.3 with increasing auxin concentrations in the substrate. This may be related to the deposition of polysaccharides and lignin in the cell wall, which help maintain the specific tensile stress of, and turgor pressure on, the cell walls.
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Affiliation(s)
- Kristína Šípošová
- Institute of Botany, Plant Science and Biodiversity Centre, Slovak Academy of Sciences, Dubravska cesta 9, 845 23 Bratislava, Slovakia
| | - Karin Kollárová
- Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 845 38 Bratislava, Slovakia
| | - Desana Lišková
- Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 845 38 Bratislava, Slovakia
| | - Zuzana Vivodová
- Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 845 38 Bratislava, Slovakia.
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196
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Chen X, Su L, Yin X, Pei Y. Responses of Chlorella vulgaris exposed to boron: Mechanisms of toxicity assessed by multiple endpoints. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2019; 70:103208. [PMID: 31207443 DOI: 10.1016/j.etap.2019.103208] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2019] [Revised: 06/06/2019] [Accepted: 06/10/2019] [Indexed: 06/09/2023]
Abstract
Boron (B) has been widely used and contaminated the aquatic ecosystem. However, knowledge of the effects of sodium pentaborate pentahydrate (SPP) on algae remains limited. This study aimed to assess SPP toxicity using multiple endpoints, specially detecting the intracellular metal ion concentrations, malondialdehyde (MDA) content and extracellular polymeric substance (EPS) classes for the very first time during SPP exposure to Chlorella vulgaris (C. vulgaris). Our findings indicated that the inhibitory effects of SPP on C. vulgaris may be related to nutrient absorption and utilization. The changes in intracellular starch grains, MDA and the protein-like substances in EPS probably acted as a defense mechanism, helping to alleviate the toxic effects. This work may contribute to the understanding of the mechanism of SPP toxicity in algae. Further studies may focus on the effects of B on speciation of metallic ions and the interaction of B with metallic ions on aquatic organisms.
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Affiliation(s)
- Xueqing Chen
- Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Liya Su
- Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Xinan Yin
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Yuansheng Pei
- Key Laboratory of Water and Sediment Sciences, Ministry of Education, School of Environment, Beijing Normal University, Beijing 100875, China.
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197
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Vergara C, Araujo KEC, Sperandio MVL, Santos LA, Urquiaga S, Zilli JÉ. Dark septate endophytic fungi increase the activity of proton pumps, efficiency of 15N recovery from ammonium sulphate, N content, and micronutrient levels in rice plants. Braz J Microbiol 2019; 50:825-838. [PMID: 31090019 PMCID: PMC6863334 DOI: 10.1007/s42770-019-00092-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Accepted: 05/04/2019] [Indexed: 11/25/2022] Open
Abstract
Plants colonised by dark septate endophytic (DSE) fungi show increased uptake of nutrients available in the environment. The objective of the present study was to evaluate the impact of DSE fungi on the activity of proton pumps, nitrogen (N) recovery from ammonium sulphate, and nutrient accumulation in rice plants. Treatments consisted of non-inoculated plants and plants inoculated with two isolates of DSE fungi, A101 and A103. To determine N recovery from the soil, ammonium sulphate enriched with 15N was added to a non-sterile substrate while parameters associated with the activity of proton pumps and with NO3- uptake were determined in a sterile environment. The A101 and A103 fungal isolates colonised the roots of rice plants, promoting 15N uptake, growth, and accumulation of nutrients as compared with the mock control. A103 induced the expression of the plasma membrane H+-ATPase (PM H+-ATPase) isoforms OsA5 and OsA8, the activity of the PM H+-ATPase and H+-pyrophosphatase. Our results suggest that the inoculation of rice plants with DSE fungi represents a strategy to improve the N recovery from ammonium sulphate and rice plant growth through the induction of OsA5 and OsA8 isoforms and stimulation of the PM H+-ATPase and H+-pyrophosphatase.
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Affiliation(s)
- Carlos Vergara
- Universidade Federal Rural do Rio de Janeiro, Instituto de Agronomia, Seropédica, RJ, Brazil
| | | | | | - Leandro Azevedo Santos
- Universidade Federal Rural do Rio de Janeiro, Instituto de Agronomia, Seropédica, RJ, Brazil
| | - Segundo Urquiaga
- Embrapa Agrobiologia, BR 465, km 07, Seropédica, RJ, 23891-000, Brazil
| | - Jerri Édson Zilli
- Embrapa Agrobiologia, BR 465, km 07, Seropédica, RJ, 23891-000, Brazil.
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198
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Wu B, Gao L, Sun Y, Wu M, Wang D, Wei J, Wang G, Wu W, Xiao J, Wang X, He P. Comparative Proteomic Analysis of the Hevea brasiliensis Latex under Ethylene and Calcium Stimulation. Protein Pept Lett 2019; 26:834-847. [PMID: 31203792 DOI: 10.2174/0929866526666190614105856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2019] [Revised: 03/28/2019] [Accepted: 04/24/2019] [Indexed: 11/22/2022]
Abstract
BACKGROUND Calcium ions usually act as a second messenger in the signal transmission process and a major element required by plants. In Hevea, calcium ion could alleviate the negative effects of long-term ethylene application to a certain extent. However, the molecular mechanisms remain unclear. METHODS Two-dimensional electrophoresis was used to determine the pattern of protein changes in latex after treatments with calcium and/or ethylene. Quantitative real-time polymerase chain reaction and Western blotting were used to determine the expression levels of some proteins and genes. STRING software was used to determine the protein-protein interaction network of the identified proteins. RESULTS Comparative proteomics identified 145 differentially expressed proteins, which represented 103 unique proteins. The abundance change patterns of some proteins involved in signal transduction, rubber particle aggregation, and natural rubber biosynthesis were altered upon calcium stimulation. Quantitative real-time polymerase chain reaction analysis of 29 proteins showed that gene expression did not always maintain the same trend as protein expression. The increased enzyme activities of superoxide dismutase, ascorbate peroxidase, and glutathione reductase suggested that calcium can enhance the antistress ability of plants by increasing the activity of their antioxidant enzyme systems. CONCLUSION These results supplement the rubber latex proteome, and provide evidence for investigating the molecular mechanisms by which calcium alleviates the negative effects of ethylene stimulation.
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Affiliation(s)
- Bingsun Wu
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Le Gao
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Yong Sun
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Min Wu
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Dan Wang
- Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Jiashao Wei
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Guihua Wang
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Wenguan Wu
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Junhan Xiao
- College of Life Sciences, Key Laboratory for Ecology of Tropical Islands, Ministry of Education, Hainan Normal University, Haikou. China
| | - Xuchu Wang
- Institute of Tropical Biosciences and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
| | - Peng He
- Rubber Research Institute, Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture and Rural Affairs, Chinese Academy of Tropical Agricultural Sciences, Haikou. China
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199
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Chemical analysis of Tanacetum corymbosum (L.) Sch. Bip. using neutron activation analysis. J Radioanal Nucl Chem 2019. [DOI: 10.1007/s10967-019-06590-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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200
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Wei C, Zhang R, Yang X, Zhu C, Li H, Zhang Y, Ma J, Yang J, Zhang X. Comparative Analysis of Calcium-Dependent Protein Kinase in Cucurbitaceae and Expression Studies in Watermelon. Int J Mol Sci 2019; 20:ijms20102527. [PMID: 31126008 PMCID: PMC6566760 DOI: 10.3390/ijms20102527] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Revised: 05/03/2019] [Accepted: 05/20/2019] [Indexed: 11/30/2022] Open
Abstract
Both the calcium-dependent protein kinases (CDPKs) and CDPK-related kinases (CRKs) play numerous roles in plant growth, development, and stress response. Despite genome-wide identification of both families in Cucumis, comparative evolutionary and functional analysis of both CDPKs and CRKs in Cucurbitaceae remain unclear. In this study, we identified 128 CDPK and 56 CRK genes in total in six Cucurbitaceae species (C. lanatus, C. sativus, C. moschata, C. maxima, C. pepo, and L. siceraria). Dot plot analysis indicated that self-duplication of conserved domains contributed to the structural variations of two CDPKs (CpCDPK19 and CpCDPK27) in C. pepo. Using watermelon genome as reference, an integrated map containing 25 loci (16 CDPK and nine CRK loci) was obtained, 16 of which (12 CDPK and four CRK) were shared by all seven Cucurbitaceae species. Combined with exon-intron organizations, topological analyses indicated an ancient origination of groups CDPK IV and CRK. Moreover, the evolutionary scenario of seven modern Cucurbitaceae species could also be reflected on the phylogenetic trees. Expression patterns of ClCDPKs and ClCRKs were studied under different abiotic stresses. Some valuable genes were uncovered for future gene function exploration. For instance, both ClCDPK6 and its ortholog CsCDPK14 in cucumber could be induced by salinity, while ClCDPK6 and ClCDPK16, as well as their orthologs in Cucumis, maintained high expression levels in male flowers. Collectively, these results provide insights into the evolutionary history of two gene families in Cucurbitaceae, and indicate a subset of candidate genes for functional characterizations in the future.
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Affiliation(s)
- Chunhua Wei
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Ruimin Zhang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Xiaozhen Yang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Chunyu Zhu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Hao Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Yong Zhang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Jianxiang Ma
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Jianqiang Yang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Xian Zhang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Horticulture, Northwest A&F University, Yangling 712100, China.
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