Systematic investigation of balanced steady-state free precession for functional MRI in the human visual cortex at 3 Tesla

Submillimeter balanced SSFP BOLD-functional MRI accelerated with 3D stack-of-spirals at 9.4 T

PURPOSE

This work aims to improve the speed of balanced SSFP (bSSFP) acquisition with segmented 3D stack-of-spirals for functional brain studies at ultrahigh field.

METHODS

Functional experiments were performed with an accelerated 3D stack-of-spirals sequence with water excitation for fat suppression. The resulting data were reconstructed using an iterative algorithm with corrections for system imperfections such as trajectory deviations and B0 inhomogeneity. In the first set of experiments, we evaluated the signal change and stability with respect to echo and TR for a full-field checkerboard stimulus. To demonstrate the high spatio-temporal resolution of the developed method, the results of three optimized protocols at submillimeter resolution (0.6-mm isotropic and 0.8-mm isotropic) and at 1.2 mm isotropic resolution for whole-brain coverage were shown.

RESULTS

Water excitation and the model-based iterative reconstruction improved image quality. The BOLD-related signal changes increased with longer TE and longer TR. We observed an increase in thermal noise performance at lower TE and higher TR. However, signal stability deteriorates at higher TE and TR. Therefore, optimized protocols used shorter TE and moderately long TR to maximize the sensitivity and speed. Reproducible activations were detected along the gray-matter gyri in the submillimeter protocols with a median signal change of approximately 4% across subjects.

CONCLUSIONS

Three-dimensional stack-of-spirals enables passband balanced SSFP functional imaging at a much higher spatial and temporal scale, compared with conventional spoiled gradient-echo train sequences.

FMRI based on transition-band balanced SSFP in comparison with EPI on a high-performance 0.55 T scanner

PURPOSE

Low-field (<1 tesla) MRI scanners allow more widespread diagnostic use for a range of cardiac, musculoskeletal, and neurological applications. However, the feasibility of performing robust fMRI at low field has yet to be fully demonstrated. To address this gap, we investigated task-based fMRI using a highly sensitive transition-band balanced steady-state free precession approach and standard EPI on a 0.55 tesla scanner equipped with modern high-performance gradient coils and a receive array.

METHODS

TR and flip-angle of transition-band steady-state free precession were optimized for 0.55 tesla by simulations. Static shimming was employed to compensate for concomitant field effects. Visual task-based fMRI data were acquired from 8 healthy volunteers. For comparison, standard EPI data were also acquired with TE = T 2 ∗ . Retrospective image-based correction for physiological effects (RETROICOR) was used to quantify physiological noise effects.

RESULTS

Activation was robustly detected using both methods in a 4-min scan time. Transition-band steady-state free precession was found to be sensitive to interference from subtle spatial and temporal (field drift, respiration) variations in the magnetic field, counteracting potential advantages of the reduced magnetic susceptibility effects compared to its utilization at high field. These adverse effects could be partially remedied with static shimming and postprocessing approaches. Standard EPI proved more robust against the sources of interference.

CONCLUSION

BOLD contrast is sufficiently large at 0.55 tesla for robust detection of brain activation and may be employed to broaden the spectrum of applications of low-field MRI. Standard EPI outperforms transition-band steady-state free precession in terms of signal stability.

Animal Functional Magnetic Resonance Imaging: Trends and Path Toward Standardization

Animal whole-brain functional magnetic resonance imaging (fMRI) provides a non-invasive window into brain activity. A collection of associated methods aims to replicate observations made in humans and to identify the mechanisms underlying the distributed neuronal activity in the healthy and disordered brain. Animal fMRI studies have developed rapidly over the past years, fueled by the development of resting-state fMRI connectivity and genetically encoded neuromodulatory tools. Yet, comparisons between sites remain hampered by lack of standardization. Recently, we highlighted that mouse resting-state functional connectivity converges across centers, although large discrepancies in sensitivity and specificity remained. Here, we explore past and present trends within the animal fMRI community and highlight critical aspects in study design, data acquisition, and post-processing operations, that may affect the results and influence the comparability between studies. We also suggest practices aimed to promote the adoption of standards within the community and improve between-lab reproducibility. The implementation of standardized animal neuroimaging protocols will facilitate animal population imaging efforts as well as meta-analysis and replication studies, the gold standards in evidence-based science.

Oscillating steady-state imaging (OSSI): A novel method for functional MRI

PURPOSE

Signal-to-noise ratio (SNR) is crucial for high-resolution fMRI; however, current methods for SNR improvement are limited. A new approach, called oscillating steady-state imaging (OSSI), produces a signal that is large and T 2 ∗ -weighted, and is demonstrated to produce improved SNR compared to gradient echo (GRE) imaging with matched effective TE and spatial-temporal acquisition characteristics for high-resolution fMRI.

METHODS

Quadratic phase sequences were combined with balanced gradients to produce a large, oscillating steady-state signal. The quadratic phase progression was periodic over short intervals such as 10 TRs, inducing a frequency-dependent phase dispersal. Images over one period were combined to produce a single image with effectively T 2 ∗ -weighting. The OSSI parameters were explored through simulation and phantom data, and 2D and 3D human fMRI data were collected using OSSI and GRE imaging.

RESULTS

Phantom and human OSSI data showed highly reproducible signal oscillations with greater signal strength than GRE. Compared to single slice GRE with matched effective TE and spatial-temporal resolution, OSSI yielded more activation in the visual cortex by a factor of 1.84 and an improvement in temporal SNR by a factor of 1.83. Voxelwise percentage change comparisons between OSSI and GRE demonstrate a similar T 2 ∗ -weighted contrast mechanism with additional T 2 ' -weighting of about 15 ms immediately after the RF pulse.

CONCLUSIONS

OSSI is a new acquisition method that exploits a large, oscillating signal that is T 2 ∗ -weighted and suitable for fMRI. The steady-state signal from balanced gradients creates higher signal strength than single slice GRE at varying TEs, enabling greater volumes of functional activity and higher SNR for high-resolution fMRI.

Multi-slice passband bSSFP for human and rodent fMRI at ultra-high field

Balanced steady-state free precession (bSSFP) can be used as an alternative to gradient-echo (GE) EPI for BOLD functional MRI when image distortions and signal drop-outs are severe such as at ultra-high field. However, 3D-bSSFP acquisitions have distinct drawbacks on either human or animal MR systems. On clinical scanners, 3D imaging is suboptimal for localized fMRI applications. It can also display distortions when acceleration methods such as spiral read-outs are used, and, compared to multi-slice acquisitions, suffers from increased sensitivity to motion or physiological noise which further results in blurring. On pre-clinical systems, 3D acquisitions have low temporal resolution due to limited acceleration options, while single slice often results in insufficient coverage. The aim of the present study was to implement a multi-slice bSSFP acquisition with Cartesian read-out to obtain non-distorted BOLD fMRI activation maps in the human and rat brain at ultra-high field. We show that, when using a new pseudo-steady-state, the bSSFP signal characteristics are preserved. In the human brain at 7 T, we demonstrate that both task- and resting-state fMRI can be performed with multi-slice bSSFP, with a temporal SNR that matches that of 3D-bSSFP, resulting in - at least - equal performance. In the rat brain at 14 T, we show that the multi-slice bSSFP protocol has similar sensitivity to gradient-echo EPI for task fMRI, while benefitting from much reduced distortions and drop-outs. The advantages of passband bSSFP at 14 T in comparison with GE-EPI are expected to be even more marked for mouse brain.

Multiline balanced SSFP for rapid functional imaging at ultrahigh field

PURPOSE

The goal of this study is to develop and evaluate a multiline balanced steady-state free-precession (bSSFP) sequence for passband functional MRI at ultrahigh field.

METHODS

Passband bSSFP functional MRI experiments using a visual task were performed on a 9.4 T system with echo trains ranging from one up to seven echoes. We analyze the acquisition efficiency, temporal and thermal signal-to-noise ratio, as well as the observed blood oxygen-level-dependent (BOLD) signal changes.

RESULTS

With increasing repetition time and echo train length, the BOLD-related signal change as well as the thermal and temporal noise were improved. Activation patterns and signal changes were stable and reproducible across subjects.

CONCLUSIONS

We propose a multiline bSSFP for functional BOLD imaging that approaches the speed of echo-planar imaging and that shows an increased BOLD sensitivity compared with single-line bSSFP. Magn Reson Med 79:994-1000, 2018. © 2017 International Society for Magnetic Resonance in Medicine.

Integrated SSFP for functional brain mapping at 7T with reduced susceptibility artifact

Balanced steady-state free precession (bSSFP) offers an alternative and potentially important tool to the standard gradient-echo echo-planar imaging (GE-EPI) for functional MRI (fMRI). Both passband and transition band based bSSFP have been proposed for fMRI. The applications of these methods, however, are limited by banding artifacts due to the sensitivity of bSSFP signal to off-resonance effects. In this article, a unique case of the SSFP-FID sequence, termed integrated-SSFP or iSSFP, was proposed to overcome the obstacle by compressing the SSFP profile into the width of a single voxel. The magnitude of the iSSFP signal was kept constant irrespective of frequency shift. Visual stimulation studies were performed to demonstrate the feasibility of fMRI using iSSFP at 7T with flip angles of 4° and 25°, compared to standard bSSFP and gradient echo (GRE) imaging. The signal changes for the complex iSSFP signal in activated voxels were 2.48±0.53 (%) and 2.96±0.87 (%) for flip angles (FA) of 4° and 25° respectively at the TR of 9.88ms. Simultaneous multi-slice acquisition (SMS) with the CAIPIRIHNA technique was carried out with iSSFP scanning to detect the anterior temporal lobe activation using a semantic processing task fMRI, compared with standard 2D GE-EPI. This study demonstrates the feasibility of iSSFP for fMRI with reduced susceptibility artifacts, while maintaining robust functional contrast at 7T.

Multi-phase passband balanced SSFP fMRI with 50ms sampling rate at 7Tesla enables high precision in resolving 100ms neuronal events

Passband balanced steady state free precession (b-SSFP) fMRI employs the flat portion of the SSFP off-resonance response to obtain microscopic susceptibility changes elicited by changes in blood oxygenation following enhancement in neuronal activity. This technique can reduce geometric distortion and signal dropout while maintaining rapid acquisition and high signal-to-noise ratio (SNR) compared with traditional fMRI techniques. In the study, we developed a novel multi-phase passband b-SSFP fMRI technique that can achieve a spatial resolution of a few mm³ and a high temporal sampling rate of 50ms per slice at 7Tesla. This technique was further applied for an event-related (ER) fMRI paradigm. As a comparison, gradient-echo echo-planar imaging (GE-EPI) with similar spatial resolution and temporal sampling rate was carried out for the same ER-fMRI experiment. Experiments with visual cortex stimulation were carried out at 7Tesla to demonstrate whether the multi-phase b-SSFP technique and GE-EPI are able to differentiate temporal delays in hemodynamic response function (HRF) separated by 100ms in stimulus onset. Consistent with ERP results, the upslope of the HRF of both techniques can differentiate 100ms delay in stimulus onset, with the former showing a lower level of intersubject variability. The present study demonstrated that the multi-phase passband b-SSFP fMRI technique can be applied for resolving neuronal events on the order of 100ms at ultrahigh magnetic fields.

Compressed Sensing for fMRI: Feasibility Study on the Acceleration of Non-EPI fMRI at 9.4T

Conventional functional magnetic resonance imaging (fMRI) technique known as gradient-recalled echo (GRE) echo-planar imaging (EPI) is sensitive to image distortion and degradation caused by local magnetic field inhomogeneity at high magnetic fields. Non-EPI sequences such as spoiled gradient echo and balanced steady-state free precession (bSSFP) have been proposed as an alternative high-resolution fMRI technique; however, the temporal resolution of these sequences is lower than the typically used GRE-EPI fMRI. One potential approach to improve the temporal resolution is to use compressed sensing (CS). In this study, we tested the feasibility of k-t FOCUSS—one of the high performance CS algorithms for dynamic MRI—for non-EPI fMRI at 9.4T using the model of rat somatosensory stimulation. To optimize the performance of CS reconstruction, different sampling patterns and k-t FOCUSS variations were investigated. Experimental results show that an optimized k-t FOCUSS algorithm with acceleration by a factor of 4 works well for non-EPI fMRI at high field under various statistical criteria, which confirms that a combination of CS and a non-EPI sequence may be a good solution for high-resolution fMRI at high fields.

Fat-suppressed alternating-SSFP for whole-brain fMRI using breath-hold and visual stimulus paradigms

PURPOSE

To achieve artifact-suppressed whole-brain pass-band-balanced steady-state free precession functional MRI from a single functional magnetic resonance imaging (fMRI) scan.

METHODS

A complete and practical data acquisition sequence for alt-SSFP fMRI was developed. First, multishot flyback-echo-planar imaging (EPI) and echo-time shifting were used to achieve data acquisition that was robust against eddy currents, gradient delays, and ghosting artifacts. Second, a steady-state catalyzation scheme was implemented to reduce oscillations in the transient signal when catalyzing in and out of alternate steady states. Next, a short spatial-spectral radiofrequency (RF) pulse was designed to achieve excellent fat-suppression while maintaining a repetition time <15 ms to sensitize functional activation toward smaller vessels and capillaries. Lastly, parallel imaging was used to achieve whole-brain coverage and sufficiently high temporal resolution.

RESULTS

Breath-hold experiments showed excellent fat-suppression and alt-SSFP's capability to recover functional sensitivity from signal dropout regions of conventional gradient-echo and banding artifacts from conventional pass-band-balanced steady-state free precession. Applying fat-suppression resulted in improved activation maps and increased temporal SNR. Visual stimulus functional studies verify the proposed method's excellent functional sensitivity to neuronal activation.

CONCLUSION

Artifact-suppressed images are demonstrated, showing a practical pass-band-balanced steady-state free precession fMRI method that permits whole-brain imaging with excellent blood oxygen level-dependent sensitivity and fat suppression.

Physiological and Functional Magnetic Resonance Imaging Using Balanced Steady-state Free Precession

Balanced steady-state free precession (bSSFP) is a highly efficient pulse sequence that is known to provide the highest signal-to-noise ratio per unit time. Recently, bSSFP is getting increasingly popular in both the research and clinical communities. This review will be focusing on the application of the bSSFP technique in the context of probing the physiological and functional information. In the first part of this review, the basic principles of bSSFP are briefly covered. Afterwards, recent developments related to the application of bSSFP, in terms of physiological and functional imaging, are introduced and reviewed. Despite its long development history, bSSFP is still a promising technique that has many potential benefits for obtaining high-resolution physiological and functional images.

Steady-state functional MRI using spoiled small-tip fast recovery imaging

PURPOSE

To determine whether a recently proposed steady-state magnetic resonance imaging (MRI) sequence, "small-tip fast recovery" (STFR), can be used for functional brain imaging. Compared to existing functional MRI (fMRI) based on T2*-contrast and long echo time, STFR has the potential for high-resolution imaging with reduced B0 artifacts such as geometric distortions, blurring, or local signal dropout.

METHODS

We used Monte Carlo Bloch simulations to calculate the voxel-averaged steady-state signal during rest and activation, for blood oxygen level dependent (BOLD) and STFR. STFR relies on a tailored "tip-up" radiofrequency pulse to align the spins with the longitudinal axis after each data readout segment, and here we performed proof-of-concept in vivo STFR fMRI experiments using a tip-up pulse tailored to a two-dimensional region-of-interest in motor cortex. Experiments were performed on multiple subjects to test reliability of the functional activation maps.

RESULTS

Bloch simulations predict a detectable functional signal that depends mainly on intravoxel dephasing, and only weakly on spin diffusion. STFR produces similar activation maps and signal change as BOLD in finger-tapping experiments, and shows reliability comparable to BOLD.

CONCLUSION

STFR can produce functional contrast (even with short TE), and is a potential alternative to long-TE ( T2*) fMRI. The functional contrast arises primarily from the interaction between T2*-like dephasing and the tailored tip-up pulse, and not from spin diffusion.

Resting-state fMRI using passband balanced steady-state free precession

OBJECTIVE

Resting-state functional MRI (rsfMRI) has been increasingly used for understanding brain functional architecture. To date, most rsfMRI studies have exploited blood oxygenation level-dependent (BOLD) contrast using gradient-echo (GE) echo planar imaging (EPI), which can suffer from image distortion and signal dropout due to magnetic susceptibility and inherent long echo time. In this study, the feasibility of passband balanced steady-state free precession (bSSFP) imaging for distortion-free and high-resolution rsfMRI was investigated.

METHODS

rsfMRI was performed in humans at 3 T and in rats at 7 T using bSSFP with short repetition time (TR = 4/2.5 ms respectively) in comparison with conventional GE-EPI. Resting-state networks (RSNs) were detected using independent component analysis.

RESULTS AND SIGNIFICANCE

RSNs derived from bSSFP images were shown to be spatially and spectrally comparable to those derived from GE-EPI images with considerable intra- and inter-subject reproducibility. High-resolution bSSFP images corresponded well to the anatomical images, with RSNs exquisitely co-localized to the gray matter. Furthermore, RSNs at areas of severe susceptibility such as human anterior prefrontal cortex and rat piriform cortex were proved accessible. These findings demonstrated for the first time that passband bSSFP approach can be a promising alternative to GE-EPI for rsfMRI. It offers distortion-free and high-resolution RSNs and is potentially suited for high field studies.

Lung Parenchymal Signal Intensity in MRI: A Technical Review with Educational Aspirations Regarding Reversible Versus Irreversible Transverse Relaxation Effects in Common Pulse Sequences

Lung parenchyma is challenging to image with proton MRI. The large air space results in ~l/5th as many signal-generating protons compared to other organs. Air/tissue magnetic susceptibility differences lead to strong magnetic field gradients throughout the lungs and to broad frequency distributions, much broader than within other organs. Such distributions have been the subject of experimental and theoretical analyses which may reveal aspects of lung microarchitecture useful for diagnosis. Their most immediate relevance to current imaging practice is to cause rapid signal decays, commonly discussed in terms of short T2* values of 1 ms or lower at typical imaging field strengths. Herein we provide a brief review of previous studies describing and interpreting proton lung spectra. We then link these broad frequency distributions to rapid signal decays, though not necessarily the exponential decays generally used to define T2* values. We examine how these decays influence observed signal intensities and spatial mapping features associated with the most prominent torso imaging sequences, including spoiled gradient and spin echo sequences. Effects of imperfect refocusing pulses on the multiple echo signal decays in single shot fast spin echo (SSFSE) sequences and effects of broad frequency distributions on balanced steady state free precession (bSSFP) sequence signal intensities are also provided. The theoretical analyses are based on the concept of explicitly separating the effects of reversible and irreversible transverse relaxation processes, thus providing a somewhat novel and more general framework from which to estimate lung signal intensity behavior in modern imaging practice.

Incorporating reversible and irreversible transverse relaxation effects into Steady State Free Precession (SSFP) signal intensity expressions for fMRI considerations

Among the multiple sequences available for functional magnetic resonance imaging (fMRI), the Steady State Free Precession (SSFP) sequence offers the highest signal-to-noise ratio (SNR) per unit time as well as distortion free images not feasible with the more commonly employed single-shot echo planar imaging (EPI) approaches. Signal changes occurring with activation in SSFP sequences reflect underlying changes in both irreversible and reversible transverse relaxation processes. The latter are characterized by changes in the central frequencies and widths of the inherent frequency distribution present within a voxel. In this work, the well-known frequency response of the SSFP signal intensity is generalized to include the widths and central frequencies of some common frequency distributions on SSFP signal intensities. The approach, using a previously unnoted series expansion, allows for a separation of reversible from irreversible transverse relaxation effects on SSFP signal intensity changes. The formalism described here should prove useful for identifying and modeling mechanisms associated with SSFP signal changes accompanying neural activation.

FMRI using balanced steady-state free precession (SSFP)

Steady-state free precession (SSFP) is a highly-efficient MRI pulse sequence that has been a fairly recent arrival in the functional MRI realm. Several methods for using balanced SSFP to detect the BOLD signal have been proposed to date and will be discussed in this review. After a brief introduction to the general properties of SSFP, this review describes the quite different approaches of transition-band and pass-band SSFP in terms of functional contrast mechanism. It then discusses the potential advantages of these techniques, followed by their challenges and shortcomings. Finally, it gives an overview of some applications considered to date and the author's perspective on where these techniques are headed. In the spirit of this special issue, the author also includes some of the personal history underlying her own explorations in this area.

Analysis of the BOLD Characteristics in Pass-Band bSSFP fMRI

Balanced steady-state free precession (bSSFP) has been proposed as an alternative method to acquire the blood oxygenation level dependent contrast. Particularly, pass-band bSSFP functional magnetic resonance imaging (fMRI) is believed to utilize the T₂ sensitivity of bSSFP in a relatively wide and flat off-resonance frequency band of the bSSFP profile. The method has a potential to provide higher signal to noise ratio (SNR) efficiency with reduced imaging artifacts compared to conventional approaches. Previous experimental results suggested that the level of the functional contrast and its characteristics are significantly influenced by the sequence parameters. However, few of these contrast characteristics have been investigated systematically. In this study, a computer simulation was performed to investigate the sources of functional contrast and the influence of scan parameters on the functional contrast to elucidate the contrast characteristics of pass-band bSSFP fMRI. Experiments were performed to validate the simulation results.

Sensitivity and specificity of high-resolution balanced steady-state free precession fMRI at high field of 9.4T

Balanced steady-state free precession (bSSFP) is an attractive fMRI method at high fields due to minimal spatial distortion. To examine sensitivity and specificity of bSSFP fMRI at ultrahigh magnetic field of 9.4T, we performed high-resolution pass-band high flip-angle (16°) bSSFP fMRI with four phase cycling (PC) angles at two repetition times (TR) of 10ms and 20ms and conventional gradient-recalled-echo (GRE) fMRI with TR of 20ms on rat brain during forepaw stimulation. The sensitivity of bSSFP fMRI with TR of 20ms was higher than that of GRE fMRI regardless of PC angle. Because of magnetic field inhomogeneity, fMRI foci were changed with PC angle in bSSFP fMRI, which was more prominent when TR was shorter. Within a middle cortical layer region where magnetic field inhomogeneity was relatively small, the homogeneity of bSSFP fMRI signals was higher at shorter TR. Acquisition of baseline transition-band bSSFP images helped to identify pass- and transition-band regions and to understand corresponding bSSFP fMRI signals. Fourier analysis of the multiple PC bSSFP datasets provided echoes of multiple pathways separately, and the main echo component showed lower sensitivity and better homogeneity than the free induction decay component. In summary, pass-band bSSFP techniques would have advantages over GRE-based fMRI in terms of sensitivity, and may be a good choice for fMRI at ultrahigh fields.

Layer-specific functional and anatomical MRI of the retina with passband balanced SSFP

The retina consists of multiple cellular and synaptic layers and is nourished by two distinct (retinal and choroidal) circulations bounding the retina, separated by an avascular layer. High spatiotemporal resolution, layer-specific MRI of the retina remains challenging due to magnetic inhomogeneity-induced artifacts. This study reports passband balanced steady-state free-precession (bSSFP) MRI at 45×45×500 μm and 1.6 s temporal resolution to image the mouse retina, overcoming geometric distortion and signal dropout while maintaining rapid acquisition and high signal-to-noise ratio. bSSFP images revealed multiple alternating dark-bright-dark-bright retinal layers. Hypoxic (10% O(2) ) inhalation decreased bSSFP signals in the two layers bounding the retina, corresponding to the retinal and choroidal vasculatures. The layer in between showed no substantial response and was assigned the avascular photoreceptor layers. Choroidal responses (-25.9 ± 6.4%, mean ± SD, n=6) were significantly (P<0.05) larger than retinal vascular responses (-11.6±2.4%). bSSFP offers very high spatiotemporal resolution and could have important applications in imaging layer-specific changes in retinal diseases.

Quantification of the magnetic resonance signal response to dynamic (C)O(2)-enhanced imaging in the brain at 3 T: R*(2) BOLD vs. balanced SSFP

PURPOSE

To compare two magnetic resonance (MR) contrast mechanisms, R*(2) BOLD and balanced SSFP, for the dynamic monitoring of the cerebral response to (C)O(2) respiratory challenges.

MATERIALS AND METHODS

Carbogen and CO(2)-enriched air were delivered to 9 healthy volunteers and 1 glioblastoma patient. The cerebral response was recorded by two-dimensional (2D) dynamic multi-gradient-echo and passband-balanced steady-state free precession (bSSFP) sequences, and local changes of R*(2) and signal intensity were investigated. Detection sensitivity was analyzed by statistical tests. An exponential signal model was fitted to the global response function delivered by each sequence, enabling quantitative comparison of the amplitude and temporal behavior.

RESULTS

The bSSFP signal changes during carbogen and CO(2)/air inhalation were lower compared with R*(2) BOLD (ca. 5% as opposed to 8-13%). The blood-oxygen-level-dependent (BOLD) response amplitude enabled differentiation between carbogen and CO(2)/air by a factor of 1.4-1.6, in contrast to bSSFP, where differentiation was not possible. Furthermore, motion robustness and detection sensitivity were higher for R*(2) BOLD.

CONCLUSION

Both contrast mechanisms are well suited to dynamic (C)O(2)-enhanced MR imaging, although the R*(2) BOLD mechanism was demonstrated to be superior in several respects for the chosen application. This study suggests that the R*(2) BOLD and bSSFP-response characteristics are related to different physiologic mechanisms.

T2-weighted 3D fMRI using S2-SSFP at 7 tesla

In this study, the sensitivity of the S(2)-steady-state free precession (SSFP) signal for functional MRI at 7 T was investigated. In order to achieve the necessary temporal resolution, a three-dimensional acquisition scheme with acceleration along two spatial axes was employed. Activation maps based on S(2)-steady-state free precession data showed similar spatial localization of activation and sensitivity as spin-echo echo-planar imaging (SE-EPI), but data can be acquired with substantially lower power deposition. The functional sensitivity estimated by the average z-values was not significantly different for SE-EPI compared to the S(2)-signal but was slightly lower for the S(2)-signal (6.74 +/- 0.32 for the TR = 15 ms protocol and 7.51 +/- 0.78 for the TR = 27 ms protocol) compared to SE-EPI (7.49 +/- 1.44 and 8.05 +/- 1.67) using the same activated voxels, respectively. The relative signal changes in these voxels upon activation were slightly lower for SE-EPI (2.37% +/- 0.18%) compared to the TR = 15 ms S(2)-SSFP protocol (2.75% +/- 0.53%) and significantly lower than the TR = 27 ms protocol (5.38% +/- 1.28%), in line with simulations results. The large relative signal change for the long TR SSFP protocol can be explained by contributions from multiple coherence pathways and the low intrinsic intensity of the S(2) signal. In conclusion, whole-brain T(2)-weighted functional MRI with negligible image distortion at 7 T is feasible using the S(2)-SSFP sequence and partially parallel imaging.

Modeling SSFP functional MRI contrast in the brain

Steady-state free precession (SSFP) has recently been proposed for function MRI because of the potential for reducing image distortion and signal dropout. Several different contrast mechanisms have been suggested to explain the reported observations, but there has been limited work comparing theory with experiment in the brain. Moreover, the detailed work that has considered oxygen-dependent signal in SSFP outside the brain has focused on R(2) effects in the pass band, and largely neglected the signal contrast that occurs due to off-resonance effects. The article describes a model for SSFP functional contrast based on the convolution of the theoretical SSFP profile with the underlying frequency distribution. It is demonstrated that such a model must account for the effects of diffusion, which can alter the apparent R(2) and linespread. Monte Carlo simulations are used to calibrate corrections for these terms. This new model has the computational efficiency of the convolution model while encapsulating information from more time-consuming Monte Carlo simulations. This corrected convolution model is shown to agree well with experimental data, and model predictions and limitations are discussed.

Magnetic flux density measurement with balanced steady state free precession pulse sequence for MREIT: a simulation study

Magnetic Resonance Electrical Impedance Tomography (MREIT) utilizes the magnetic flux density B(z), generated due to current injection, to find conductivity distribution inside an object. This B(z) can be measured from MR phase images using spin echo pulse sequence. The SNR of B(z) and the sensitivity of phase produced by B(z) in MR phase image are critical in deciding the resolution of MREIT conductivity images. The conventional spin echo based data acquisition has poor phase sensitivity to current injection. Longer scan time is needed to acquire data with higher SNR. We propose a balanced steady state free precession (b-SSFP) based pulse sequence which is highly sensitive to small off-resonance phase changes. A procedure to reconstruct B(z) from MR signal obtained with b-SSFP sequence is described. Phases for b-SSFP signals for two conductivity phantoms of TX 151 and Gelatin are simulated from the mathematical models of b-SSFP signal. It was observed that the phase changes obtained from b-SSFP pulse sequence are highly sensitive to current injection and hence would produce higher magnetic flux density. However, the b-SSFP signal is dependent on magnetic field inhomogeneity and the signal deteriorated highly for small offset from resonance frequency. The simulation results show that the b-SSFP sequence can be utilized for conductivity imaging of a local region where magnetic field inhomogeneity is small. A proper shimming of magnet is recommended before using the b-SSFP sequence.

Full-brain coverage and high-resolution imaging capabilities of passband b-SSFP fMRI at 3T

Passband balanced-steady-state free precession (b-SSFP) fMRI is a recently developed method that utilizes the passband (flat portion) of the b-SSFP off-resonance response to measure MR signal changes elicited by changes in tissue oxygenation following increases in neuronal activity. Rapid refocusing and short readout durations of b-SSFP, combined with the relatively large flat portion of the b-SSFP off-resonance spectrum allows distortion-free full-brain coverage with only two acquisitions. This allows for high-resolution functional imaging, without the spatial distortion frequently encountered in conventional high-resolution functional images. Finally, the 3D imaging compatibility of the b-SSFP acquisitions permits isotropic-voxel-size high-resolution acquisitions. In this study we address some of the major technical issues involved in obtaining passband b-SSFP-based functional brain images with practical imaging parameters and demonstrate the advantages through breath-holding and visual field mapping experiments.

Local frequency density of states around field inhomogeneities in magnetic resonance imaging: effects of diffusion

A method describing NMR-signal formation in inhomogeneous tissue is presented which covers all diffusion regimes. For this purpose, the frequency distribution inside the voxel is described. Generalizing the results of the well-known static dephasing regime, we derive a formalism to describe the frequency distribution that is valid over the whole dynamic range. The expressions obtained are in agreement with the results obtained from Kubos line-shape theory. To examine the diffusion effects, we utilize a strong collision approximation, which replaces the original diffusion process by a simpler stochastic dynamics. We provide a generally valid relation between the frequency distribution and the local Larmor frequency inside the voxel. To demonstrate the formalism we give analytical expressions for the frequency distribution and the free induction decay in the case of cylindrical and spherical magnetic inhomogeneities. For experimental verification, we performed measurements using a single-voxel spectroscopy method. The data obtained for the frequency distribution, as well as the magnetization decay, are in good agreement with the analytic results, although experiments were limited by magnetic field gradients caused by an imperfect shim and low signal-to-noise ratio.

Signal and noise characteristics of SSFP FMRI: a comparison with GRE at multiple field strengths

Recent work has proposed the use of steady-state free precession (SSFP) as an alternative to the conventional methods for obtaining functional MRI (FMRI) data. The contrast mechanism in SSFP is likely to be related to conventional FMRI signals, but the details of the signal changes may differ in important ways. Functional contrast in SSFP has been proposed to result from several different mechanisms, which are likely to contribute in varying degrees depending on the specific parameters used in the experiment. In particular, the signal dynamics are likely to differ depending on whether the sequence is configured to scan in the SSFP transition band or passband. This work describes experiments that explore the source of SSFP FMRI signal changes by comparing SSFP data to conventional gradient-recalled echo (GRE) data. Data were acquired at a range of magnetic field strengths and repetition times, for both transition band and passband methods. The signal properties of SSFP and GRE differ significantly, confirming a different source of functional contrast in SSFP. In addition, the temporal noise properties are significantly different, with important implications for SSFP FMRI sequence optimisation.

Factors influencing fast low angle positive contrast steady-state free precession (FLAPS) magnetic resonance imaging

The presence of susceptibility-shifting media can lead to signal voids in magnetic resonance images. While signal voids have been traditionally used to detect such magnetic perturbers, selective magnetic resonance imaging of off-resonant spins surrounding susceptibility-shifted media allows for them to be visualized as hyper-intense (positive contrast) regions. These positive contrast methods can potentially improve the detection conspicuity of magnetic perturbers against regions that appear dark due to the absence of protons, such as air. Recently, a fast low angle positive contrast steady-state free precession (FLAPS) technique has been proposed as a positive contrast imaging method. This work systematically evaluates the contrast characteristics and acquisition strategies of FLAPS-based imaging from the standpoint of imaging parameters and physical properties of the magnetic perturbers. Results show that scan parameters (T(R), flip angle, B0), physical properties of the perturber (size and concentration of shift reagent) and the ratio of the relaxation constants (T1/T2) of the medium are significant factors influencing the FLAPS-based positive contrast.