1
|
Elsisi M, Elshiekh M, Sabry N, Aziz M, Attia K, Islam F, Chen J, Abdelrahman M. The genetic orchestra of salicylic acid in plant resilience to climate change induced abiotic stress: critical review. STRESS BIOLOGY 2024; 4:31. [PMID: 38880851 PMCID: PMC11180647 DOI: 10.1007/s44154-024-00160-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Accepted: 03/12/2024] [Indexed: 06/18/2024]
Abstract
Climate change, driven by human activities and natural processes, has led to critical alterations in varying patterns during cropping seasons and is a vital threat to global food security. The climate change impose several abiotic stresses on crop production systems. These abiotic stresses include extreme temperatures, drought, and salinity, which expose agricultural fields to more vulnerable conditions and lead to substantial crop yield and quality losses. Plant hormones, especially salicylic acid (SA), has crucial roles for plant resiliency under unfavorable environments. This review explores the genetics and molecular mechanisms underlying SA's role in mitigating abiotic stress-induced damage in plants. It also explores the SA biosynthesis pathways, and highlights the regulation of their products under several abiotic stresses. Various roles and possible modes of action of SA in mitigating abiotic stresses are discussed, along with unraveling the genetic mechanisms and genes involved in responses under stress conditions. Additionally, this review investigates molecular pathways and mechanisms through which SA exerts its protective effects, such as redox signaling, cross-talks with other plant hormones, and mitogen-activated protein kinase pathways. Moreover, the review discusses potentials of using genetic engineering approaches, such as CRISPR technology, for deciphering the roles of SA in enhancing plant resilience to climate change related abiotic stresses. This comprehensive analysis bridges the gap between genetics of SA role in response to climate change related stressors. Overall goal is to highlight SA's significance in safeguarding plants and by offering insights of SA hormone for sustainable agriculture under challenging environmental conditions.
Collapse
Affiliation(s)
- Mohamed Elsisi
- School of Biotechnology, Nile University, Giza, 12588, Egypt
| | - Moaz Elshiekh
- School of Biotechnology, Nile University, Giza, 12588, Egypt
| | - Nourine Sabry
- School of Biotechnology, Nile University, Giza, 12588, Egypt
| | - Mark Aziz
- School of Biotechnology, Nile University, Giza, 12588, Egypt
| | - Kotb Attia
- College of Science, King Saud University, P.O. Box 2455, 11451, Riyadh, Saudi Arabia
| | - Faisal Islam
- International Genome Center, Jiangsu University, Zhenjiang, 212013, China.
| | - Jian Chen
- International Genome Center, Jiangsu University, Zhenjiang, 212013, China.
| | | |
Collapse
|
2
|
Waszczak C, Yarmolinsky D, Leal Gavarrón M, Vahisalu T, Sierla M, Zamora O, Carter R, Puukko T, Sipari N, Lamminmäki A, Durner J, Ernst D, Winkler JB, Paulin L, Auvinen P, Fleming AJ, Andersson MX, Kollist H, Kangasjärvi J. Synthesis and import of GDP-l-fucose into the Golgi affect plant-water relations. THE NEW PHYTOLOGIST 2024; 241:747-763. [PMID: 37964509 DOI: 10.1111/nph.19378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2023] [Accepted: 10/13/2023] [Indexed: 11/16/2023]
Abstract
Land plants evolved multiple adaptations to restrict transpiration. However, the underlying molecular mechanisms are not sufficiently understood. We used an ozone-sensitivity forward genetics approach to identify Arabidopsis thaliana mutants impaired in gas exchange regulation. High water loss from detached leaves and impaired decrease of leaf conductance in response to multiple stomata-closing stimuli were identified in a mutant of MURUS1 (MUR1), an enzyme required for GDP-l-fucose biosynthesis. High water loss observed in mur1 was independent from stomatal movements and instead could be linked to metabolic defects. Plants defective in import of GDP-l-Fuc into the Golgi apparatus phenocopied the high water loss of mur1 mutants, linking this phenotype to Golgi-localized fucosylation events. However, impaired fucosylation of xyloglucan, N-linked glycans, and arabinogalactan proteins did not explain the aberrant water loss of mur1 mutants. Partial reversion of mur1 water loss phenotype by borate supplementation and high water loss observed in boron uptake mutants link mur1 gas exchange phenotypes to pleiotropic consequences of l-fucose and boron deficiency, which in turn affect mechanical and morphological properties of stomatal complexes and whole-plant physiology. Our work emphasizes the impact of fucose metabolism and boron uptake on plant-water relations.
Collapse
Affiliation(s)
- Cezary Waszczak
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| | | | - Marina Leal Gavarrón
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| | - Triin Vahisalu
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| | - Maija Sierla
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| | - Olena Zamora
- Institute of Technology, University of Tartu, 50411, Tartu, Estonia
| | - Ross Carter
- Sainsbury Laboratory, University of Cambridge, CB2 1LR, Cambridge, UK
| | - Tuomas Puukko
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| | - Nina Sipari
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
- Viikki Metabolomics Unit, Faculty of Biological and Environmental Sciences, University of Helsinki, FI-00014, Helsinki, Finland
| | - Airi Lamminmäki
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| | - Jörg Durner
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764, Neuherberg, Germany
| | - Dieter Ernst
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764, Neuherberg, Germany
| | - J Barbro Winkler
- Research Unit Environmental Simulation, Helmholtz Zentrum München, German Research Center for Environmental Health, 85764, Neuherberg, Germany
| | - Lars Paulin
- Institute of Biotechnology, University of Helsinki, FI-00014, Helsinki, Finland
| | - Petri Auvinen
- Institute of Biotechnology, University of Helsinki, FI-00014, Helsinki, Finland
| | - Andrew J Fleming
- School of Biosciences, University of Sheffield, S10 2TN, Sheffield, UK
| | - Mats X Andersson
- Department of Biological and Environmental Sciences, University of Gothenburg, SE-405 30, Gothenburg, Sweden
| | - Hannes Kollist
- Institute of Technology, University of Tartu, 50411, Tartu, Estonia
| | - Jaakko Kangasjärvi
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FI-00014, Helsinki, Finland
| |
Collapse
|
3
|
Wang H, Li M, Yang Y, Sun P, Zhou S, Kang Y, Xu Y, Yuan X, Feng Z, Jin W. Physiological and molecular responses of different rose ( Rosa hybrida L.) cultivars to elevated ozone levels. PLANT DIRECT 2023; 7:e513. [PMID: 37484545 PMCID: PMC10359767 DOI: 10.1002/pld3.513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/07/2023] [Revised: 06/18/2023] [Accepted: 06/23/2023] [Indexed: 07/25/2023]
Abstract
The increasing ground-level ozone (O3) pollution resulting from rapid global urbanization and industrialization has negative effects on many plants. Nonetheless, many gaps remain in our knowledge of how ornamental plants respond to O3. Rose (Rosa hybrida L.) is a commercially important ornamental plant worldwide. In this study, we exposed four rose cultivars ("Schloss Mannheim," "Iceberg," "Lüye," and "Spectra") to either unfiltered ambient air (NF), unfiltered ambient air plus 40 ppb O3 (NF40), or unfiltered ambient air plus 80 ppb O3 (NF80). Only the cultivar "Schloss Mannheim" showed significant O3-related effects, including foliar injury, reduced chlorophyll content, reduced net photosynthetic rate, reduced stomatal conductance, and reduced stomatal apertures. In "Schloss Mannheim," several transcription factor genes-HSF, WRKY, and MYB genes-were upregulated by O3 exposure, and their expression was correlated with that of NCED1, PP2Cs, PYR/PYL, and UGTs, which are related to ABA biosynthesis and signaling. These results suggest that HSF, WRKY, and MYB transcription factors and ABA are important components of the plant response to O3 stress, suggesting a possible strategy for cultivating O3-tolerant rose varieties.
Collapse
Affiliation(s)
- Hua Wang
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center of Functional FloricultureBeijingChina
| | - Maofu Li
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center of Functional FloricultureBeijingChina
| | - Yuan Yang
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center for Deciduous Fruit TreesBeijingChina
| | - Pei Sun
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center of Functional FloricultureBeijingChina
| | - Shuting Zhou
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center of Functional FloricultureBeijingChina
| | - Yanhui Kang
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center of Functional FloricultureBeijingChina
| | - Yansen Xu
- School of Applied MeteorologyNanjing University of Information Science & TechnologyNanjingChina
| | - Xiangyang Yuan
- School of Applied MeteorologyNanjing University of Information Science & TechnologyNanjingChina
| | - Zhaozhong Feng
- School of Applied MeteorologyNanjing University of Information Science & TechnologyNanjingChina
| | - Wanmei Jin
- Institute of Forestry and PomologyBeijing Academy of Agriculture and Forestry SciencesBeijingChina
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China)Ministry of Agriculture and Rural AffairsBeijingChina
- Beijing Engineering Research Center of Functional FloricultureBeijingChina
| |
Collapse
|
4
|
Leppälä J, Gaupels F, Xu E, Morales LO, Durner J, Brosché M. Ozone and nitrogen dioxide regulate similar gene expression responses in Arabidopsis but natural variation in the extent of cell death is likely controlled by different genetic loci. FRONTIERS IN PLANT SCIENCE 2022; 13:994779. [PMID: 36340361 PMCID: PMC9627343 DOI: 10.3389/fpls.2022.994779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
Abstract
High doses of ozone (O3) and nitrogen dioxide (NO2) cause damage and cell death in plants. These two gases are among the most harmful air pollutants for ecosystems and therefore it is important to understand how plant resistance or sensitivity to these gases work at the molecular level and its genetic control. We compared transcriptome data from O3 and NO2 fumigations to other cell death related treatments, as well as individual marker gene transcript level in different Arabidopsis thaliana accessions. Our analysis revealed that O3 and NO2 trigger very similar gene expression responses that include genes involved in pathogen resistance, cell death and ethylene signaling. However, we also identified exceptions, for example RBOHF encoding a reactive oxygen species producing RESPIRATORY BURST OXIDASE PROTEIN F. This gene had increased transcript levels by O3 but decreased transcript levels by NO2, showing that plants can identify each of the gases separately and activate distinct signaling pathways. To understand the genetics, we conducted a genome wide association study (GWAS) on O3 and NO2 tolerance of natural Arabidopsis accessions. Sensitivity to both gases seem to be controlled by several independent small effect loci and we did not find an overlap in the significantly associated regions. Further characterization of the GWAS candidate loci identified new regulators of O3 and NO2 induced cell death including ABH1, a protein that functions in abscisic acid signaling, mRNA splicing and miRNA processing. The GWAS results will facilitate further characterization of the control of programmed cell death and differences between oxidative and nitrosative stress in plants.
Collapse
Affiliation(s)
- Johanna Leppälä
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Centre, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| | - Frank Gaupels
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - Enjun Xu
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Centre, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| | - Luis O. Morales
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Centre, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| | - Jörg Durner
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - Mikael Brosché
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Centre, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
| |
Collapse
|
5
|
Xu E, Tikkanen M, Seyednasrollah F, Kangasjärvi S, Brosché M. Simultaneous Ozone and High Light Treatments Reveal an Important Role for the Chloroplast in Co-ordination of Defense Signaling. FRONTIERS IN PLANT SCIENCE 2022; 13:883002. [PMID: 35873979 PMCID: PMC9303991 DOI: 10.3389/fpls.2022.883002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 06/06/2022] [Indexed: 06/15/2023]
Abstract
Plants live in a world of changing environments, where they are continuously challenged by alternating biotic and abiotic stresses. To transfer information from the environment to appropriate protective responses, plants use many different signaling molecules and pathways. Reactive oxygen species (ROS) are critical signaling molecules in the regulation of plant stress responses, both inside and between cells. In natural environments, plants can experience multiple stresses simultaneously. Laboratory studies on stress interaction and crosstalk at regulation of gene expression, imply that plant responses to multiple stresses are distinctly different from single treatments. We analyzed the expression of selected marker genes and reassessed publicly available datasets to find signaling pathways regulated by ozone, which produces apoplastic ROS, and high light treatment, which produces chloroplastic ROS. Genes related to cell death regulation were differentially regulated by ozone versus high light. In a combined ozone + high light treatment, the light treatment enhanced ozone-induced cell death in leaves. The distinct responses from ozone versus high light treatments show that plants can activate stress signaling pathways in a highly precise manner.
Collapse
Affiliation(s)
- Enjun Xu
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, Helsinki, Finland
| | - Mikko Tikkanen
- Department of Biochemistry, Molecular Plant Biology, University of Turku, Turku, Finland
| | - Fatemeh Seyednasrollah
- Institute of Biotechnology, HILIFE – Helsinki Institute of Life Science, University of Helsinki, Helsinki, Finland
| | - Saijaliisa Kangasjärvi
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, Helsinki, Finland
| | - Mikael Brosché
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, Helsinki, Finland
| |
Collapse
|
6
|
Aglyamova A, Petrova N, Gorshkov O, Kozlova L, Gorshkova T. Growing Maize Root: Lectins Involved in Consecutive Stages of Cell Development. PLANTS 2022; 11:plants11141799. [PMID: 35890433 PMCID: PMC9319948 DOI: 10.3390/plants11141799] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Revised: 07/01/2022] [Accepted: 07/04/2022] [Indexed: 11/16/2022]
Abstract
Proteins that carry specific carbohydrate-binding lectin domains have a great variety and are ubiquitous across the plant kingdom. In turn, the plant cell wall has a complex carbohydrate composition, which is subjected to constant changes in the course of plant development. In this regard, proteins with lectin domains are of great interest in the context of studying their contribution to the tuning and monitoring of the cell wall during its modifications in the course of plant organ development. We performed a genome-wide screening of lectin motifs in the Zea mays genome and analyzed the transcriptomic data from five zones of primary maize root with cells at different development stages. This allowed us to obtain 306 gene sequences encoding putative lectins and to relate their expressions to the stages of root cell development and peculiarities of cell wall metabolism. Among the lectins whose expression was high and differentially regulated in growing maize root were the members of the EUL, dirigent–jacalin, malectin, malectin-like, GNA and Nictaba families, many of which are predicted as cell wall proteins or lectin receptor-like kinases that have direct access to the cell wall. Thus, a set of molecular players was identified with high potential to play important roles in the early stages of root morphogenesis.
Collapse
Affiliation(s)
- Aliya Aglyamova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center Kazan Scientific Center of Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan 420111, Russia; (A.A.); (N.P.); (O.G.); (L.K.)
- Institute of Fundamental Medicine and Biology, Kazan Federal University, Kremlevskaya Str. 18, Kazan 420008, Russia
| | - Natalia Petrova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center Kazan Scientific Center of Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan 420111, Russia; (A.A.); (N.P.); (O.G.); (L.K.)
| | - Oleg Gorshkov
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center Kazan Scientific Center of Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan 420111, Russia; (A.A.); (N.P.); (O.G.); (L.K.)
| | - Liudmila Kozlova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center Kazan Scientific Center of Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan 420111, Russia; (A.A.); (N.P.); (O.G.); (L.K.)
- Institute of Fundamental Medicine and Biology, Kazan Federal University, Kremlevskaya Str. 18, Kazan 420008, Russia
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, Federal Research Center Kazan Scientific Center of Russian Academy of Sciences, Lobachevsky Str. 2/31, Kazan 420111, Russia; (A.A.); (N.P.); (O.G.); (L.K.)
- Institute of Physiology, Federal Research Center Komi Science Center of Ural Branch of Russian Academy of Sciences, Kommunisticheskaya Str. 28, Syktyvkar 167982, Russia
- Correspondence:
| |
Collapse
|
7
|
Liu J, Qiu G, Liu C, Li H, Chen X, Fu Q, Lin Y, Guo B. Salicylic Acid, a Multifaceted Hormone, Combats Abiotic Stresses in Plants. LIFE (BASEL, SWITZERLAND) 2022; 12:life12060886. [PMID: 35743917 PMCID: PMC9225363 DOI: 10.3390/life12060886] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Revised: 06/10/2022] [Accepted: 06/11/2022] [Indexed: 11/16/2022]
Abstract
In recent decades, many new and exciting findings have paved the way to the better understanding of plant responses in various environmental changes. Some major areas are focused on role of phytohormone during abiotic stresses. Salicylic acid (SA) is one such plant hormone that has been implicated in processes not limited to plant growth, development, and responses to environmental stress. This review summarizes the various roles and functions of SA in mitigating abiotic stresses to plants, including heating, chilling, salinity, metal toxicity, drought, ultraviolet radiation, etc. Consistent with its critical roles in plant abiotic tolerance, this review identifies the gaps in the literature with regard to the complex signalling network between SA and reactive oxygen species, ABA, Ca2+, and nitric oxide. Furthermore, the molecular mechanisms underlying signalling networks that control development and stress responses in plants and underscore prospects for future research on SA concerning abiotic-stressed plants are also discussed.
Collapse
|
8
|
Sheng C, Yu D, Li X, Yu H, Zhang Y, Saqib Bilal M, Ma H, Zhang X, Baig A, Nie P, Zhao H. OsAPX1 Positively Contributes to Rice Blast Resistance. FRONTIERS IN PLANT SCIENCE 2022; 13:843271. [PMID: 35386681 PMCID: PMC8978999 DOI: 10.3389/fpls.2022.843271] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/25/2021] [Accepted: 01/28/2022] [Indexed: 06/14/2023]
Abstract
Ascorbate peroxidases (APXs) maintain cellular reactive oxygen species (ROS) homeostasis through their peroxidase activity. Here, we report that OsAPX1 also promotes ROS production such that a delicate cellular ROS homeostasis is achieved temporally after Magnaporthe oryzae infection. OsAPX1 specifically induces ROS production through increasing respiratory burst oxidase homologs (OsRBOHs) expression and can be inhibited by DPI, a ROS inhibitor. The time-course experiment data show that the simultaneous induction of OsAPX1 and OsRBOHs leads to ROS accumulation at an early stage; whereas a more durable expression of OsAPX1 leads to ROS scavenging at a later stage. By the temporal switching between ROS inducer and eliminator, OsAPX1 triggers an instant ROS burst upon M. oryzae infection and then a timely elimination of ROS toxicity. We find that OsAPX1 is under the control of the miR172a-OsIDS1 regulatory module. OsAPX1 also affects salicylic acid (SA) synthesis and signaling, which contribute to blast resistance. In conclusion, we show that OsAPX1 is a key factor that connects the upstream gene silencing and transcription regulatory routes with the downstream phytohormone and redox pathway, which provides an insight into the sophisticated regulatory network of rice innate immunity.
Collapse
Affiliation(s)
- Cong Sheng
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| | - Dongli Yu
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| | - Xuan Li
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| | - Hanxi Yu
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| | - Yimai Zhang
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| | - Muhammad Saqib Bilal
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| | - Hongyu Ma
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
| | - Xin Zhang
- Institute of Industrial Crops, Shanxi Agricultural University, Taiyuan, China
| | - Ayesha Baig
- Department of Biotechnology, COMSATS University Islamabad Abbottabad Campus, Abbottabad, Pakistan
| | - Pingping Nie
- College of Life Sciences, Zaozhuang University, Zaozhuang, China
| | - Hongwei Zhao
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing, China
- Laboratory of Bio-interactions and Crop Health, Nanjing Agricultural University, Nanjing, China
| |
Collapse
|
9
|
Zhang J, Wang Y, Mao Z, Liu W, Ding L, Zhang X, Yang Y, Wu S, Chen X, Wang Y. Transcription factor McWRKY71 induced by ozone stress regulates anthocyanin and proanthocyanidin biosynthesis in Malus crabapple. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2022; 232:113274. [PMID: 35124421 DOI: 10.1016/j.ecoenv.2022.113274] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2021] [Revised: 01/21/2022] [Accepted: 01/29/2022] [Indexed: 06/14/2023]
Abstract
In plants, anthocyanins and proanthocyanidins (PAs) play important roles in plant resistance to abiotic stress. In this study, ozone (O3) treatments caused the up-regulation of Malus crabapple structural genes McANS, McCHI, McANR and McF3H, which promoted anthocyanin and PA accumulation. We identified the WRKY transcription factor (TF) McWRKY71 by screening differentially expressed genes (DEGs) that were highly expressed in response to O3 stress from an RNA sequencing (RNA-seq) analysis. Overexpressing McWRKY71 increased the resistance of 'Orin' apple calli to O3 stress and promoted the accumulation of anthocyanins and PAs, which facilitated reactive oxygen species scavenging to further enhance O3 tolerance. Biochemical and molecular analyses showed that McWRKY71 interacted with McMYB12 and directly bound the McANR promoter to participate in the regulation of PA biosynthesis. These findings provide new insights into the WRKY TFs mechanisms that regulate the biosynthesis of secondary metabolites, which respond to O3 stress, in Malus crabapple.
Collapse
Affiliation(s)
- Junkang Zhang
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China
| | - Yicheng Wang
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Taian 271018, China
| | - Zuolin Mao
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Taian 271018, China
| | - Weina Liu
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China
| | - Licheng Ding
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China
| | - Xiaonan Zhang
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China
| | - Yuwei Yang
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China
| | - Shuqing Wu
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China
| | - Xuesen Chen
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Taian 271018, China
| | - Yanling Wang
- College of Forestry, Shandong Agricultural University, Taian 271018, China; State Forestry and Grassland Administration Key Laboratory of Silviculture in Downstream Areas of the Yellow River, Taian 271018, China.
| |
Collapse
|
10
|
García-Caparrós P, De Filippis L, Gul A, Hasanuzzaman M, Ozturk M, Altay V, Lao MT. Oxidative Stress and Antioxidant Metabolism under Adverse Environmental Conditions: a Review. THE BOTANICAL REVIEW 2021; 87:421-466. [PMID: 0 DOI: 10.1007/s12229-020-09231-1] [Citation(s) in RCA: 93] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 09/01/2020] [Indexed: 05/25/2023]
|
11
|
Naithani S, Komath SS, Nonomura A, Govindjee G. Plant lectins and their many roles: Carbohydrate-binding and beyond. JOURNAL OF PLANT PHYSIOLOGY 2021; 266:153531. [PMID: 34601337 DOI: 10.1016/j.jplph.2021.153531] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Revised: 09/18/2021] [Accepted: 09/19/2021] [Indexed: 06/13/2023]
Abstract
Lectins are ubiquitous proteins that reversibly bind to specific carbohydrates and, thus, serve as readers of the sugar code. In photosynthetic organisms, lectin family proteins play important roles in capturing and releasing photosynthates via an endogenous lectin cycle. Often, lectin proteins consist of one or more lectin domains in combination with other types of domains. This structural diversity of lectins is the basis for their current classification, which is consistent with their diverse functions in cell signaling associated with growth and development, as well as in the plant's response to biotic, symbiotic, and abiotic stimuli. Furthermore, the lectin family shows evolutionary expansion that has distinct clade-specific signatures. Although the function(s) of many plant lectin family genes are unknown, studies in the model plant Arabidopsis thaliana have provided insights into their diverse roles. Here, we have used a biocuration approach rooted in the critical review of scientific literature and information available in the public genomic databases to summarize the expression, localization, and known functions of lectins in Arabidopsis. A better understanding of the structure and function of lectins is expected to aid in improving agricultural productivity through the manipulation of candidate genes for breeding climate-resilient crops, or by regulating metabolic pathways by applications of plant growth regulators.
Collapse
Affiliation(s)
- Sushma Naithani
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97333, USA.
| | - Sneha Sudha Komath
- School of Life Sciences, Jawaharlal Nehru University, New Delhi, 110067, India
| | - Arthur Nonomura
- Department of Chemistry, Northern Arizona University, South San Francisco Street, Flagstaff, AZ, 86011, USA
| | - Govindjee Govindjee
- Department of Plant Biology, Department of Biochemistry, and Center of Biophysics & Quantitative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
| |
Collapse
|
12
|
Koh E, Cohen D, Brandis A, Fluhr R. Attenuation of cytosolic translation by RNA oxidation is involved in singlet oxygen-mediated transcriptomic responses. PLANT, CELL & ENVIRONMENT 2021; 44:3597-3615. [PMID: 34370334 DOI: 10.1111/pce.14162] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2020] [Accepted: 08/03/2021] [Indexed: 06/13/2023]
Abstract
Singlet oxygen (1 O2 ) production is associated with stress signalling. Here, using Arabidopsis as a model system, we study the effects of the accumulation of 8-hydroxyguanosine (8-oxoG), a major product of 1 O2 -mediated RNA oxidation. We show that 8-oxoG can accumulate in vivo when 1 O2 is produced in the cytoplasm. Conditions for such production include the application of RB in the light, dark-to-light transitions in the flu mutant, or subjecting plants to combined dehydration/light exposure. Transcriptomes of these treatments displayed a significant overlap with transcripts stimulated by the cytosolic 80S ribosomal translation inhibitors, cycloheximide and homoharringtonine. We demonstrate that 8-oxoG accumulation correlates with a decrease in RNA translatability, resulting in the rapid decrease of the levels of labile gene repressor elements such as IAA1 and JAZ1 in a proteasome-dependent manner. Indeed, genes regulated by the labile repressors of the jasmonic acid signalling pathway were induced by cycloheximide, RB or dehydration/light treatment independently of the hormone. The results suggest that 1 O2 , by oxidizing RNA, attenuated cellular translatability and caused specific genes to be released from the repression of their cognate short half-life repressors. The findings here describe a novel means of gene regulation via the direct interaction of 1 O2 with RNA.
Collapse
Affiliation(s)
- Eugene Koh
- Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Dekel Cohen
- Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Alexander Brandis
- Life Sciences Core Facility, Weizmann Institute of Science, Rehovot, Israel
| | - Robert Fluhr
- Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
| |
Collapse
|
13
|
Saleem M, Fariduddin Q, Castroverde CDM. Salicylic acid: A key regulator of redox signalling and plant immunity. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 168:381-397. [PMID: 34715564 DOI: 10.1016/j.plaphy.2021.10.011] [Citation(s) in RCA: 52] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2021] [Revised: 09/30/2021] [Accepted: 10/03/2021] [Indexed: 05/04/2023]
Abstract
In plants, the reactive oxygen species (ROS) formed during normal conditions are essential in regulating several processes, like stomatal physiology, pathogen immunity and developmental signaling. However, biotic and abiotic stresses can cause ROS over-accumulation leading to oxidative stress. Therefore, a suitable equilibrium is vital for redox homeostasis in plants, and there have been major advances in this research arena. Salicylic acid (SA) is known as a chief regulator of ROS; however, the underlying mechanisms remain largely unexplored. SA plays an important role in establishing the hypersensitive response (HR) and systemic acquired resistance (SAR). This is underpinned by a robust and complex network of SA with Non-Expressor of Pathogenesis Related protein-1 (NPR1), ROS, calcium ions (Ca2+), nitric oxide (NO) and mitogen-activated protein kinase (MAPK) cascades. In this review, we summarize the recent advances in the regulation of ROS and antioxidant defense system signalling by SA at the physiological and molecular levels. Understanding the molecular mechanisms of how SA controls redox homeostasis would provide a fundamental framework to develop approaches that will improve plant growth and fitness, in order to meet the increasing global demand for food and bioenergy.
Collapse
Affiliation(s)
- Mohd Saleem
- Plant Physiology and Biochemistry Section, Department of Botany, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202002, India
| | - Qazi Fariduddin
- Plant Physiology and Biochemistry Section, Department of Botany, Faculty of Life Sciences, Aligarh Muslim University, Aligarh, 202002, India.
| | | |
Collapse
|
14
|
Xu E, Chai L, Zhang S, Yu R, Zhang X, Xu C, Hu Y. Catabolism of strigolactones by a carboxylesterase. NATURE PLANTS 2021; 7:1495-1504. [PMID: 34764442 DOI: 10.1038/s41477-021-01011-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2020] [Accepted: 09/18/2021] [Indexed: 06/13/2023]
Abstract
Strigolactones (SLs) are carotenoid-derived plant hormones that control shoot branching and communications between host plants and symbiotic fungi or root parasitic plants. Extensive studies have identified the key components participating in SL biosynthesis and signalling, whereas the catabolism or deactivation of endogenous SLs in planta remains largely unknown. Here, we report that the Arabidopsis carboxylesterase 15 (AtCXE15) and its orthologues function as efficient hydrolases of SLs. We show that overexpression of AtCXE15 promotes shoot branching by dampening SL-inhibited axillary bud outgrowth. We further demonstrate that AtCXE15 could bind and efficiently hydrolyse SLs both in vitro and in planta. We also provide evidence that AtCXE15 is capable of catalysing hydrolysis of diverse SL analogues and that such CXE15-dependent catabolism of SLs is evolutionarily conserved in seed plants. These results disclose a catalytic mechanism underlying homoeostatic regulation of SLs in plants, which also provides a rational approach to spatial-temporally manipulate the endogenous SLs and thus architecture of crops and ornamental plants.
Collapse
Affiliation(s)
- Enjun Xu
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China
| | - Liang Chai
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Shiqi Zhang
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Ruixue Yu
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Xixi Zhang
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China
- Institute of Science and Technology Austria, Klosterneuburg, Austria
| | - Chongyi Xu
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China
| | - Yuxin Hu
- Key Laboratory of Plant Molecular Physiology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Botany, Chinese Academy of Sciences, Beijing, China.
- National Center for Plant Gene Research, Beijing, China.
| |
Collapse
|
15
|
Zamora O, Schulze S, Azoulay-Shemer T, Parik H, Unt J, Brosché M, Schroeder JI, Yarmolinsky D, Kollist H. Jasmonic acid and salicylic acid play minor roles in stomatal regulation by CO 2 , abscisic acid, darkness, vapor pressure deficit and ozone. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 108:134-150. [PMID: 34289193 PMCID: PMC8842987 DOI: 10.1111/tpj.15430] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Revised: 07/07/2021] [Accepted: 07/14/2021] [Indexed: 05/08/2023]
Abstract
Jasmonic acid (JA) and salicylic acid (SA) regulate stomatal closure, preventing pathogen invasion into plants. However, to what extent abscisic acid (ABA), SA and JA interact, and what the roles of SA and JA are in stomatal responses to environmental cues, remains unclear. Here, by using intact plant gas-exchange measurements in JA and SA single and double mutants, we show that stomatal responsiveness to CO2 , light intensity, ABA, high vapor pressure deficit and ozone either did not or, for some stimuli only, very slightly depended upon JA and SA biosynthesis and signaling mutants, including dde2, sid2, coi1, jai1, myc2 and npr1 alleles. Although the stomata in the mutants studied clearly responded to ABA, CO2 , light and ozone, ABA-triggered stomatal closure in npr1-1 was slightly accelerated compared with the wild type. Stomatal reopening after ozone pulses was quicker in the coi1-16 mutant than in the wild type. In intact Arabidopsis plants, spraying with methyl-JA led to only a modest reduction in stomatal conductance 80 min after treatment, whereas ABA and CO2 induced pronounced stomatal closure within minutes. We could not document a reduction of stomatal conductance after spraying with SA. Coronatine-induced stomatal opening was initiated slowly after 1.5-2.0 h, and reached a maximum by 3 h after spraying intact plants. Our results suggest that ABA, CO2 and light are major regulators of rapid guard cell signaling, whereas JA and SA could play only minor roles in the whole-plant stomatal response to environmental cues in Arabidopsis and Solanum lycopersicum (tomato).
Collapse
Affiliation(s)
- Olena Zamora
- Plant Signal Research Group, Institute of Technology, University of Tartu, Nooruse 1, Tartu 50411, Estonia
| | - Sebastian Schulze
- Division of Biological Sciences, Cell and Developmental Biology Section, University of California, San Diego, La Jolla, CA 92093, USA
| | - Tamar Azoulay-Shemer
- Division of Biological Sciences, Cell and Developmental Biology Section, University of California, San Diego, La Jolla, CA 92093, USA
- Fruit Tree Sciences, Agricultural Research Organization (ARO), the Volcani Center, Newe Ya’ar Research Center, Ramat Yishay, Israel, and
| | - Helen Parik
- Plant Signal Research Group, Institute of Technology, University of Tartu, Nooruse 1, Tartu 50411, Estonia
| | - Jaanika Unt
- Plant Signal Research Group, Institute of Technology, University of Tartu, Nooruse 1, Tartu 50411, Estonia
| | - Mikael Brosché
- Plant Signal Research Group, Institute of Technology, University of Tartu, Nooruse 1, Tartu 50411, Estonia
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, PO Box 65 (Viikinkaari 1), Helsinki FI-00014, Finland
| | - Julian I. Schroeder
- Division of Biological Sciences, Cell and Developmental Biology Section, University of California, San Diego, La Jolla, CA 92093, USA
| | - Dmitry Yarmolinsky
- Plant Signal Research Group, Institute of Technology, University of Tartu, Nooruse 1, Tartu 50411, Estonia
- For correspondence ()
| | - Hannes Kollist
- Plant Signal Research Group, Institute of Technology, University of Tartu, Nooruse 1, Tartu 50411, Estonia
| |
Collapse
|
16
|
Kacprzyk J, Burke R, Schwarze J, McCabe PF. Plant programmed cell death meets auxin signalling. FEBS J 2021; 289:1731-1745. [PMID: 34543510 DOI: 10.1111/febs.16210] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Revised: 08/26/2021] [Accepted: 09/17/2021] [Indexed: 11/28/2022]
Abstract
Both auxin signalling and programmed cell death (PCD) are essential components of a normally functioning plant. Auxin underpins plant growth and development, as well as regulating plant defences against environmental stresses. PCD, a genetically controlled pathway for selective elimination of redundant, damaged or infected cells, is also a key element of many developmental processes and stress response mechanisms in plants. An increasing body of evidence suggests that auxin signalling and PCD regulation are often connected. While generally auxin appears to suppress cell death, it has also been shown to promote PCD events, most likely via stimulation of ethylene biosynthesis. Intriguingly, certain cells undergoing PCD have also been suggested to control the distribution of auxin in plant tissues, by either releasing a burst of auxin or creating an anatomical barrier to auxin transport and distribution. These recent findings indicate novel roles of localized PCD events in the context of plant development such as control of root architecture, or tissue regeneration following injury, and suggest exciting possibilities for incorporation of this knowledge into crop improvement strategies.
Collapse
Affiliation(s)
- Joanna Kacprzyk
- School of Biology and Environmental Science, Science Centre, University College Dublin, Dublin, Ireland
| | - Rory Burke
- School of Biology and Environmental Science, Science Centre, University College Dublin, Dublin, Ireland
| | - Johanna Schwarze
- School of Biology and Environmental Science, Science Centre, University College Dublin, Dublin, Ireland
| | - Paul F McCabe
- School of Biology and Environmental Science, Science Centre, University College Dublin, Dublin, Ireland
| |
Collapse
|
17
|
Hasan MM, Rahman MA, Skalicky M, Alabdallah NM, Waseem M, Jahan MS, Ahammed GJ, El-Mogy MM, El-Yazied AA, Ibrahim MFM, Fang XW. Ozone Induced Stomatal Regulations, MAPK and Phytohormone Signaling in Plants. Int J Mol Sci 2021; 22:ijms22126304. [PMID: 34208343 PMCID: PMC8231235 DOI: 10.3390/ijms22126304] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2021] [Revised: 06/08/2021] [Accepted: 06/09/2021] [Indexed: 12/27/2022] Open
Abstract
Ozone (O3) is a gaseous environmental pollutant that can enter leaves through stomatal pores and cause damage to foliage. It can induce oxidative stress through the generation of reactive oxygen species (ROS) like hydrogen peroxide (H2O2) that can actively participate in stomatal closing or opening in plants. A number of phytohormones, including abscisic acid (ABA), ethylene (ET), salicylic acid (SA), and jasmonic acid (JA) are involved in stomatal regulation in plants. The effects of ozone on these phytohormones’ ability to regulate the guard cells of stomata have been little studied, however, and the goal of this paper is to explore and understand the effects of ozone on stomatal regulation through guard cell signaling by phytohormones. In this review, we updated the existing knowledge by considering several physiological mechanisms related to stomatal regulation after response to ozone. The collected information should deepen our understanding of the molecular pathways associated with response to ozone stress, in particular, how it influences stomatal regulation, mitogen-activated protein kinase (MAPK) activity, and phytohormone signaling. After summarizing the findings and noting the gaps in the literature, we present some ideas for future research on ozone stress in plants
Collapse
Affiliation(s)
- Md. Mahadi Hasan
- State Key Laboratory of Grassland Agro-Ecosystems, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (M.M.H.); (M.W.)
| | - Md. Atikur Rahman
- Grassland and Forage Division, National Institute of Animal Science, Rural Development Administration, Cheonan 31000, Korea;
| | - Milan Skalicky
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, 16500 Prague, Czech Republic;
| | - Nadiyah M. Alabdallah
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, Dammam 383, Saudi Arabia;
| | - Muhammad Waseem
- State Key Laboratory of Grassland Agro-Ecosystems, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (M.M.H.); (M.W.)
| | - Mohammad Shah Jahan
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China;
- Department of Horticulture, Sher-e-Bangla Agricultural University, Dhaka 1207, Bangladesh
| | - Golam Jalal Ahammed
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China;
| | - Mohamed M. El-Mogy
- Vegetable Crop Department, Faculty of Agriculture, Cairo University, Giza 12613, Egypt;
| | - Ahmed Abou El-Yazied
- Department of Horticulture, Faculty of Agriculture, Ain Shams University, Cairo 11566, Egypt;
| | - Mohamed F. M. Ibrahim
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo 11566, Egypt;
| | - Xiang-Wen Fang
- State Key Laboratory of Grassland Agro-Ecosystems, School of Life Sciences, Lanzhou University, Lanzhou 730000, China; (M.M.H.); (M.W.)
- Correspondence:
| |
Collapse
|
18
|
Morales LO, Shapiguzov A, Safronov O, Leppälä J, Vaahtera L, Yarmolinsky D, Kollist H, Brosché M. Ozone responses in Arabidopsis: beyond stomatal conductance. PLANT PHYSIOLOGY 2021; 186:180-192. [PMID: 33624812 PMCID: PMC8154098 DOI: 10.1093/plphys/kiab097] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/03/2021] [Accepted: 02/15/2021] [Indexed: 06/12/2023]
Abstract
Tropospheric ozone (O3) is a major air pollutant that decreases yield of important crops worldwide. Despite long-lasting research of its negative effects on plants, there are many gaps in our knowledge on how plants respond to O3. In this study, we used natural variation in the model plant Arabidopsis (Arabidopsis thaliana) to characterize molecular and physiological mechanisms underlying O3 sensitivity. A key parameter in models for O3 damage is stomatal uptake. Here we show that the extent of O3 damage in the sensitive Arabidopsis accession Shahdara (Sha) does not correspond with O3 uptake, pointing toward stomata-independent mechanisms for the development of O3 damage. We compared tolerant (Col-0) versus sensitive accessions (Sha, Cvi-0) in assays related to photosynthesis, cell death, antioxidants, and transcriptional regulation. Acute O3 exposure increased cell death, development of lesions in the leaves, and decreased photosynthesis in sensitive accessions. In both Sha and Cvi-0, O3-induced lesions were associated with decreased maximal chlorophyll fluorescence and low quantum yield of electron transfer from Photosystem II to plastoquinone. However, O3-induced repression of photosynthesis in these two O3-sensitive accessions developed in different ways. We demonstrate that O3 sensitivity in Arabidopsis is influenced by genetic diversity given that Sha and Cvi-0 developed accession-specific transcriptional responses to O3. Our findings advance the understanding of plant responses to O3 and set a framework for future studies to characterize molecular and physiological mechanisms allowing plants to respond to high O3 levels in the atmosphere as a result of high air pollution and climate change.
Collapse
Affiliation(s)
- Luis O Morales
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FIN-00014 Helsinki, Finland
- School of Science & Technology, The Life Science Center-Biology, Örebro University, SE-70182 Örebro, Sweden
| | - Alexey Shapiguzov
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FIN-00014 Helsinki, Finland
- Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia
| | - Omid Safronov
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FIN-00014 Helsinki, Finland
| | - Johanna Leppälä
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FIN-00014 Helsinki, Finland
- Department of Ecology and Environmental Sciences, Umeå University, 90187 Umeå, Sweden
| | - Lauri Vaahtera
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FIN-00014 Helsinki, Finland
- Department of Biology, Norwegian University of Science and Technology (NTNU), NO-7491 Trondheim, Norway
| | | | - Hannes Kollist
- Institute of Technology, University of Tartu, 50411 Tartu, Estonia
| | - Mikael Brosché
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, Viikki Plant Science Centre, University of Helsinki, FIN-00014 Helsinki, Finland
| |
Collapse
|
19
|
León J, Gayubas B, Castillo MC. Valine-Glutamine Proteins in Plant Responses to Oxygen and Nitric Oxide. FRONTIERS IN PLANT SCIENCE 2021; 11:632678. [PMID: 33603762 PMCID: PMC7884903 DOI: 10.3389/fpls.2020.632678] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Accepted: 12/31/2020] [Indexed: 06/01/2023]
Abstract
Multigene families coding for valine-glutamine (VQ) proteins have been identified in all kind of plants but chlorophytes. VQ proteins are transcriptional regulators, which often interact with WRKY transcription factors to regulate gene expression sometimes modulated by reversible phosphorylation. Different VQ-WRKY complexes regulate defense against varied pathogens as well as responses to osmotic stress and extreme temperatures. However, despite these well-known functions, new regulatory activities for VQ proteins are still to be explored. Searching public Arabidopsis thaliana transcriptome data for new potential targets of VQ-WRKY regulation allowed us identifying several VQ protein and WRKY factor encoding genes that were differentially expressed in oxygen-related processes such as responses to hypoxia or ozone-triggered oxidative stress. Moreover, some of those were also differentially regulated upon nitric oxide (NO) treatment. These subsets of VQ and WRKY proteins might combine into different VQ-WRKY complexes, thus representing a potential regulatory core of NO-modulated and O2-modulated responses. Given the increasing relevance that gasotransmitters are gaining as plant physiology regulators, and particularly considering the key roles exerted by O2 and NO in regulating the N-degron pathway-controlled stability of transcription factors, VQ and WRKY proteins could be instrumental in regulating manifold processes in plants.
Collapse
|
20
|
Vuorinen K, Zamora O, Vaahtera L, Overmyer K, Brosché M. Dissecting Contrasts in Cell Death, Hormone, and Defense Signaling in Response to Botrytis cinerea and Reactive Oxygen Species. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2021; 34:75-87. [PMID: 33006531 DOI: 10.1094/mpmi-07-20-0202-r] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Plants require interaction between signaling pathways to differentiate and integrate stress responses and deploy appropriate defenses. The hormones ethylene, salicylic acid (SA), and jasmonic acid (JA) are important regulators of plant defenses. Numerous interactions between these signaling pathways are the cornerstone of robust plant immunity. Additionally, during the early response to pathogens, reactive oxygen species (ROS) act as signaling molecules. Here, we examined the extent of signal interaction in the early stages of Botrytis cinerea infection. To enable a comparison between B. cinerea infection with ROS signaling, we subjected plants to ozone treatment, which stimulates an apoplastic ROS burst. We used a collection of single, double, and triple signaling mutants defective in hormone signaling and biosynthesis and subjected them to B. cinerea infection and ozone treatment at different timepoints. We examined lesion size, cell death, and gene expression (both quantitatively and spatially). The two treatments shared many similarities, especially in JA-insensitive mutants, which were sensitive to both treatments. Unexpectedly, a B. cinerea-susceptible JA-insensitive mutant (coi1), became tolerant when both SA biosynthesis and signaling was impaired (coi1 npr1 sid2), demonstrating that JA responses may be under the control of SA. Extensive marker gene analysis indicated JA as the main regulator of both B. cinerea and ozone defenses. In addition, we identified the transcription factor SR1 as a crucial regulator of PLANT DEFENSIN expression and cell-death regulation, which contributes to resistance to B. cinerea. Overall, our work further defines the context of ROS in plant defense signaling.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
Collapse
Affiliation(s)
- Katariina Vuorinen
- Viikki Plant Science Centre and Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, 00013 Helsinki, Finland
| | - Olena Zamora
- Institute of Technology, University of Tartu, Nooruse 1, 50411 Tartu, Estonia
| | - Lauri Vaahtera
- Department of Biology, Faculty of Natural Sciences, Norwegian University of Science and Technology, Trondheim, Norway
| | - Kirk Overmyer
- Viikki Plant Science Centre and Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, 00013 Helsinki, Finland
| | - Mikael Brosché
- Viikki Plant Science Centre and Organismal and Evolutionary Biology Research Program, Faculty of Biological and Environmental Sciences, University of Helsinki, 00013 Helsinki, Finland
- Institute of Technology, University of Tartu, Nooruse 1, 50411 Tartu, Estonia
| |
Collapse
|
21
|
Nabi RBS, Tayade R, Imran QM, Hussain A, Shahid M, Yun BW. Functional Insight of Nitric-Oxide Induced DUF Genes in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2020; 11:1041. [PMID: 32765550 PMCID: PMC7378322 DOI: 10.3389/fpls.2020.01041] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 06/24/2020] [Indexed: 05/30/2023]
Abstract
Advances in next-generation sequencing technologies facilitate the study of plant molecular functions in detail and with precision. Plant genome and proteome databases are continually being updated with large transcriptomic or genomic datasets. With the ever-increasing amount of sequencing data, several thousands of genes or proteins in public databases remain uncharacterized, and their domain functions are largely unknown. Such proteins contain domains of unknown function (DUF). In the present study, we identified 231 upregulated and 206 downregulated DUF genes from the available RNA-Seq-based transcriptome profiling datasets of Arabidopsis leaves exposed to a nitric oxide donor, S-nitroso-L-cysteine (CysNO). In addition, we performed extensive in silico and biological experiments to determine the potential functions of AtDUF569 and to elucidate its role in plant growth, development, and defense. We validated the expression pattern of the most upregulated and the most downregulated DUF genes from the transcriptomic data. In addition, a loss-of AtDUF569 function mutant was evaluated for growth, development, and defense against biotic and abiotic stresses. According to the results of the study, AtDUF569 negatively regulates biotic stress responses and differentially regulates plant growth under nitro-oxidative stress conditions.
Collapse
Affiliation(s)
- Rizwana Begum Syed Nabi
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
- Department of Southern Area Crop Science, National Institute of Crop Science, Rural Development Administration, Miryang, South Korea
| | - Rupesh Tayade
- Laboratory of Plant Breeding, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Qari Muhammad Imran
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Adil Hussain
- Department of Agriculture, Abdul Wali Khan University, Mardan, Pakistan
| | - Muhammad Shahid
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| | - Byung-Wook Yun
- Laboratory of Plant Functional Genomics, School of Applied Biosciences, Kyungpook National University, Daegu, South Korea
| |
Collapse
|
22
|
He J, Zhang RX, Kim DS, Sun P, Liu H, Liu Z, Hetherington AM, Liang YK. ROS of Distinct Sources and Salicylic Acid Separate Elevated CO 2-Mediated Stomatal Movements in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2020; 11:542. [PMID: 32457781 PMCID: PMC7225777 DOI: 10.3389/fpls.2020.00542] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2019] [Accepted: 04/09/2020] [Indexed: 05/12/2023]
Abstract
Elevated CO2 (eCO2) often reduces leaf stomatal aperture and density thus impacts plant physiology and productivity. We have previously demonstrated that the Arabidopsis BIG protein distinguishes between the processes of eCO2-induced stomatal closure and eCO2-inhibited stomatal opening. However, the mechanistic basis of this action is not fully understood. Here we show that eCO2-elicited reactive oxygen species (ROS) production in big mutants was compromised in stomatal closure induction but not in stomatal opening inhibition. Pharmacological and genetic studies show that ROS generated by both NADPH oxidases and cell wall peroxidases contribute to eCO2-induced stomatal closure, whereas inhibition of light-induced stomatal opening by eCO2 may rely on the ROS derived from NADPH oxidases but not from cell wall peroxidases. As with JA and ABA, SA is required for eCO2-induced ROS generation and stomatal closure. In contrast, none of these three signals has a significant role in eCO2-inhibited stomatal opening, unveiling the distinct roles of plant hormonal signaling pathways in the induction of stomatal closure and the inhibition of stomatal opening by eCO2. In conclusion, this study adds SA to a list of plant hormones that together with ROS from distinct sources distinguish two branches of eCO2-mediated stomatal movements.
Collapse
Affiliation(s)
- Jingjing He
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| | - Ruo-Xi Zhang
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| | - Dae Sung Kim
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| | - Peng Sun
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| | - Honggang Liu
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| | - Zhongming Liu
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| | - Alistair M. Hetherington
- School of Biological Sciences, Life Sciences Building, University of Bristol, Bristol, United Kingdom
| | - Yun-Kuan Liang
- State Key Laboratory of Hybrid Rice, Department of Plant Science, College of Life Sciences, Wuhan University, Wuhan, China
| |
Collapse
|
23
|
A conserved motif in three viral movement proteins from different genera is required for host factor recruitment and cell-to-cell movement. Sci Rep 2020; 10:4758. [PMID: 32179855 PMCID: PMC7075923 DOI: 10.1038/s41598-020-61741-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Accepted: 03/02/2020] [Indexed: 12/22/2022] Open
Abstract
Due to their minimal genomes, plant viruses are forced to hijack specific cellular pathways to ensure host colonization, a condition that most frequently involves physical interaction between viral and host proteins. Among putative viral interactors are the movement proteins, responsible for plasmodesma gating and genome binding during viral transport. Two of them, DGBp1 and DGBp2, are required for alpha-, beta- and gammacarmovirus cell-to-cell movement, but the number of DGBp-host interactors identified at present is limited. By using two different approaches, yeast two-hybrid and bimolecular fluorescence complementation assays, we found three Arabidopsis factors, eIF3g1, RPP3A and WRKY36, interacting with DGBp1s from each genus mentioned above. eIF3g1 and RPP3A are mainly involved in protein translation initiation and elongation phases, respectively, while WRKY36 belongs to WRKY transcription factor family, important regulators of many defence responses. These host proteins are not expected to be associated with viral movement, but knocking out WRKY36 or silencing either RPP3A or eIF3g1 negatively affected Arabidopsis infection by Turnip crinkle virus. A highly conserved FNF motif at DGBp1 C-terminus was required for protein-protein interaction and cell-to-cell movement, suggesting an important biological role.
Collapse
|
24
|
Kalliola M, Jakobson L, Davidsson P, Pennanen V, Waszczak C, Yarmolinsky D, Zamora O, Palva ET, Kariola T, Kollist H, Brosché M. Differential role of MAX2 and strigolactones in pathogen, ozone, and stomatal responses. PLANT DIRECT 2020; 4:e00206. [PMID: 32128474 PMCID: PMC7047155 DOI: 10.1002/pld3.206] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Revised: 02/03/2020] [Accepted: 02/11/2020] [Indexed: 05/23/2023]
Abstract
Strigolactones are a group of phytohormones that control developmental processes including shoot branching and various plant-environment interactions in plants. We previously showed that the strigolactone perception mutant more axillary branches 2 (max2) has increased susceptibility to plant pathogenic bacteria. Here we show that both strigolactone biosynthesis (max3 and max4) and perception mutants (max2 and dwarf14) are significantly more sensitive to Pseudomonas syringae DC3000. Moreover, in response to P. syringae infection, high levels of SA accumulated in max2 and this mutant was ozone sensitive. Further analysis of gene expression revealed no major role for strigolactone in regulation of defense gene expression. In contrast, guard cell function was clearly impaired in max2 and depending on the assay used, also in max3, max4, and d14 mutants. We analyzed stomatal responses to stimuli that cause stomatal closure. While the response to abscisic acid (ABA) was not impaired in any of the mutants, the response to darkness and high CO2 was impaired in max2 and d14-1 mutants, and to CO2 also in strigolactone synthesis (max3, max4) mutants. To position the role of MAX2 in the guard cell signaling network, max2 was crossed with mutants defective in ABA biosynthesis or signaling. This revealed that MAX2 acts in a signaling pathway that functions in parallel to the guard cell ABA signaling pathway. We propose that the impaired defense responses of max2 are related to higher stomatal conductance that allows increased entry of bacteria or air pollutants like ozone. Furthermore, as MAX2 appears to act in a specific branch of guard cell signaling (related to CO2 signaling), this protein could be one of the components that allow guard cells to distinguish between different environmental conditions.
Collapse
Affiliation(s)
- Maria Kalliola
- Faculty of Biological and Environmental SciencesViikki Plant Science CentreUniversity of HelsinkiHelsinkiFinland
| | | | - Pär Davidsson
- Faculty of Biological and Environmental SciencesViikki Plant Science CentreUniversity of HelsinkiHelsinkiFinland
| | - Ville Pennanen
- Faculty of Biological and Environmental SciencesViikki Plant Science CentreUniversity of HelsinkiHelsinkiFinland
| | - Cezary Waszczak
- Organismal and Evolutionary Biology Research ProgrammeFaculty of Biological and Environmental SciencesViikki Plant Science CentreUniversity of HelsinkiHelsinkiFinland
| | | | - Olena Zamora
- Institute of TechnologyUniversity of TartuTartuEstonia
| | - E. Tapio Palva
- Faculty of Biological and Environmental SciencesViikki Plant Science CentreUniversity of HelsinkiHelsinkiFinland
| | - Tarja Kariola
- LUMA Centre Päijät‐HämeUniversity of HelsinkiLahtiFinland
| | | | - Mikael Brosché
- Institute of TechnologyUniversity of TartuTartuEstonia
- Organismal and Evolutionary Biology Research ProgrammeFaculty of Biological and Environmental SciencesViikki Plant Science CentreUniversity of HelsinkiHelsinkiFinland
| |
Collapse
|
25
|
Gu Z, Li W, Doughty J, Meng D, Yang Q, Yuan H, Li Y, Chen Q, Yu J, Liu CS, Li T. A gamma-thionin protein from apple, MdD1, is required for defence against S-RNase-induced inhibition of pollen tube prior to self/non-self recognition. PLANT BIOTECHNOLOGY JOURNAL 2019; 17:2184-2198. [PMID: 31001872 PMCID: PMC6790362 DOI: 10.1111/pbi.13131] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2019] [Revised: 04/09/2019] [Accepted: 04/14/2019] [Indexed: 05/09/2023]
Abstract
Apple exhibits S-RNase-mediated self-incompatibility. Although the cytotoxic effect of S-RNase inside the self-pollen tube has been studied extensively, the underlying defence mechanism in pollen tube in Rosaceae remains unclear. On exposure to stylar S-RNase, plant defence responses are activated in the pollen tube; however, how these are regulated is currently poorly understood. Here, we show that entry of both self and non-self S-RNase into pollen tubes of apple (Malus domestica) stimulates jasmonic acid (JA) production, in turn inducing the accumulation of MdMYC2 transcripts, a transcription factor in the JA signalling pathway widely considered to be involved in plant defence processes. MdMYC2 acts as a positive regulator in the pollen tube activating expression of MdD1, a gene encoding a defence protein. Importantly, MdD1 was shown to bind to the RNase activity sites of S-RNase leading to inhibition of enzymatic activity. This work provides intriguing insights into an ancient defence mechanism present in apple pollen tubes where MdD1 likely acts as a primary line of defence to inhibit S-RNase cytotoxicity prior to self/non-self recognition.
Collapse
Affiliation(s)
- Zhaoyu Gu
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Wei Li
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - James Doughty
- Department of Biology and BiochemistryUniversity of BathBathUK
| | - Dong Meng
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Qing Yang
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Hui Yuan
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Yang Li
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Qiuju Chen
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Jie Yu
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Chun sheng Liu
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Tianzhong Li
- Laboratory of Fruit Cell and Molecular BreedingChina Agricultural UniversityBeijingChina
| |
Collapse
|
26
|
Arabidopsis Flowers Unlocked the Mechanism of Jasmonate Signaling. PLANTS 2019; 8:plants8080285. [PMID: 31416189 PMCID: PMC6724136 DOI: 10.3390/plants8080285] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Revised: 08/08/2019] [Accepted: 08/12/2019] [Indexed: 11/18/2022]
Abstract
The Arabidopsis male-sterile phenotype has been a wonderful model for jasmonate action in plants. It has allowed us to identify transcription factors that control gene expression during stamen and pollen maturation and provided for the discovery of the JAZ repressor proteins and the mechanism of jasmonate signaling. More recently, it has revealed intriguing details of the spatial localization of jasmonate synthesis and perception in stamen tissues. The extensive and thoughtful application of protein–protein interaction assays to identify JAZ-interacting partners has led to a much richer appreciation of the mechanisms by which jasmonate integrates with the actions of other hormones to regulate plant growth and physiological responses. This integration is strikingly evident in stamen and pollen development in Arabidopsis, which requires the actions of many hormones. Just as importantly, it is now evident that jasmonate has very different actions during flower development and reproduction in other plant species. This integration and diversity of action indicates that many exciting discoveries remain to be made in this area of jasmonate hormone signaling and response.
Collapse
|
27
|
Pinneh EC, Stoppel R, Knight H, Knight MR, Steel PG, Denny PW. Expression levels of inositol phosphorylceramide synthase modulate plant responses to biotic and abiotic stress in Arabidopsis thaliana. PLoS One 2019; 14:e0217087. [PMID: 31120963 PMCID: PMC6532887 DOI: 10.1371/journal.pone.0217087] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Accepted: 04/30/2019] [Indexed: 12/17/2022] Open
Abstract
This research was undertaken to investigate the global role of the plant inositol phosphorylceramide synthase (IPCS), a non-mammalian enzyme previously shown to be associated with the pathogen response. RNA-Seq analyses demonstrated that over-expression of inositol phosphorylceramide synthase isoforms AtIPCS1, 2 or 3 in Arabidopsis thaliana resulted in the down-regulation of genes involved in plant response to pathogens. In addition, genes associated with the abiotic stress response to salinity, cold and drought were found to be similarly down-regulated. Detailed analyses of transgenic lines over-expressing AtIPCS1-3 at various levels revealed that the degree of down-regulation is specifically correlated with the level of IPCS expression. Singular enrichment analysis of these down-regulated genes showed that AtIPCS1-3 expression affects biological signaling pathways involved in plant response to biotic and abiotic stress. The up-regulation of genes involved in photosynthesis and lipid localization was also observed in the over-expressing lines.
Collapse
Affiliation(s)
- Elizabeth C. Pinneh
- Department of Biosciences, Durham University, Durham, United Kingdom
- Department of Chemistry, Durham University, Durham, United Kingdom
| | - Rhea Stoppel
- Bayer AG, Crop Science Division, Industriepark Höchst, Frankfurt am Main, Germany
| | - Heather Knight
- Department of Biosciences, Durham University, Durham, United Kingdom
| | - Marc R. Knight
- Department of Biosciences, Durham University, Durham, United Kingdom
| | - Patrick G. Steel
- Department of Chemistry, Durham University, Durham, United Kingdom
| | - Paul W. Denny
- Department of Biosciences, Durham University, Durham, United Kingdom
| |
Collapse
|
28
|
Marchica A, Lorenzini G, Papini R, Bernardi R, Nali C, Pellegrini E. Signalling molecules responsive to ozone-induced oxidative stress in Salvia officinalis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 657:568-576. [PMID: 30550919 DOI: 10.1016/j.scitotenv.2018.11.472] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2018] [Revised: 11/29/2018] [Accepted: 11/30/2018] [Indexed: 05/27/2023]
Abstract
Tropospheric ozone (O3) is the most important gaseous pollutant and induces a mass of negative impacts on vegetation at functional and genic levels. The aim of the present study was to investigate the role of reactive oxygen species and signalling molecules in sage plants exposed to O3 (200 ppb, 5 h). Ozone exposure induced only a transient oxidative burst, as confirmed by the rapid peak of anion superoxide during the first hours of exposure (+16% compared to controls). The spontaneous reaction of O3 with membrane fatty acids stimulates peroxidative processes, as demonstrated by the rise of thiobarbituric acid reactive substances concentration starting after 1 h of exposure (+25%). The formation of lipid-based signalling molecules (e.g. jasmonic acid) may be regarded as a sort of O3-perception. The concomitant accumulation of salicylic acid suggests that sage responds early to O3 by inducing cellular antioxidants mechanisms in order to minimize O3-oxidative burst. The transient increase of abscisic acid (+25% at the end of the treatment) twinned with the maximal ethylene emission (about two-fold higher than controls) could be interpreted as a first attempt by plants to regulate the signalling responses induced by O3. In order to investigate the involvement of transcription factors in managing oxidative protection, BLASTX analysis against the Salvia miltiorrhiza sequence genome was carried out using Arabidopsis thaliana WRKY sequences as queries. Six gene sequences were identified for sage WRKYs and their relative gene expression analyses were characterized. WRKY4, WRKY5, WRKY11 and WRKY46 were up-regulated by O3 at 2 and 5 h of exposure and they showed similarity with AtWRKY48, AtWRKY22 and AtWRKY53 in A. thaliana. These results suggest that WRKYs could play a pivotal role in the signalling mechanisms during the responses of plants to O3.
Collapse
Affiliation(s)
- Alessandra Marchica
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Giacomo Lorenzini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; Nutrafood Research Center, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Romina Papini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Rodolfo Bernardi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; Nutrafood Research Center, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| | - Cristina Nali
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; Nutrafood Research Center, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy.
| | - Elisa Pellegrini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; Nutrafood Research Center, University of Pisa, Via del Borghetto 80, 56124 Pisa, Italy
| |
Collapse
|
29
|
Abstract
As fixed organisms, plants are especially affected by changes in their environment and have consequently evolved extensive mechanisms for acclimation and adaptation. Initially considered by-products from aerobic metabolism, reactive oxygen species (ROS) have emerged as major regulatory molecules in plants and their roles in early signaling events initiated by cellular metabolic perturbation and environmental stimuli are now established. Here, we review recent advances in ROS signaling. Compartment-specific and cross-compartmental signaling pathways initiated by the presence of ROS are discussed. Special attention is dedicated to established and hypothetical ROS-sensing events. The roles of ROS in long-distance signaling, immune responses, and plant development are evaluated. Finally, we outline the most challenging contemporary questions in the field of plant ROS biology and the need to further elucidate mechanisms allowing sensing, signaling specificity, and coordination of multiple signals.
Collapse
Affiliation(s)
- Cezary Waszczak
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, and Viikki Plant Science Centre, University of Helsinki, 00014 Helsinki, Finland;
| | | | - Jaakko Kangasjärvi
- Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, and Viikki Plant Science Centre, University of Helsinki, 00014 Helsinki, Finland;
| |
Collapse
|
30
|
Overmyer K, Vuorinen K, Brosché M. Interaction points in plant stress signaling pathways. PHYSIOLOGIA PLANTARUM 2018; 162:191-204. [PMID: 28857168 DOI: 10.1111/ppl.12639] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2017] [Revised: 08/23/2017] [Accepted: 08/24/2017] [Indexed: 05/29/2023]
Abstract
Plants live in a world where they are challenged by abiotic and biotic stresses. In response to unfavorable conditions or an acute challenge like a pathogen attack, plants use various signaling pathways that regulate expression of defense genes and other mechanisms to provide resistance or stress adaptation. Identification of the regulatory steps in defense signaling has seen much progress in recent years. Many of the identified signaling pathways show interactions with each other, exemplified by the modulation of the jasmonic acid response by salicylic acid. Accordingly, defense regulation is more appropriately thought of as a web of interactions, rather than linear pathways. Here we describe various regulatory components and how they interact to provide an appropriate defense response. One of the common assays to monitor the output of defense signaling, as well as interaction between signaling pathways, is the measurement of altered gene expression. We illustrate that, while this is a suitable assay to monitor defense regulation, it can also inadvertently provide overstated conclusions about interaction among signaling pathways.
Collapse
Affiliation(s)
- Kirk Overmyer
- Division of Plant Biology, Department of Biosciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 65 (Viikinkaari 1), FI-00014, Helsinki, Finland
| | - Katariina Vuorinen
- Division of Plant Biology, Department of Biosciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 65 (Viikinkaari 1), FI-00014, Helsinki, Finland
| | - Mikael Brosché
- Division of Plant Biology, Department of Biosciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 65 (Viikinkaari 1), FI-00014, Helsinki, Finland
- Institute of Technology, University of Tartu, Nooruse 1, 50411, Tartu, Estonia
| |
Collapse
|
31
|
Eggermont L, Verstraeten B, Van Damme EJM. Genome-Wide Screening for Lectin Motifs in Arabidopsis thaliana. THE PLANT GENOME 2017; 10. [PMID: 28724081 DOI: 10.3835/plantgenome2017.02.0010] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
For more than three decades, served as a model for plant biology research. At present only a few protein families have been studied in detail in . This study focused on all sequences with lectin motifs in the genome of . Based on amino acid sequence similarity (BLASTp searches), 217 putative lectin genes were retrieved belonging to 9 out of 12 different lectin families. The domain organization and genomic distribution for each lectin family were analyzed. Domain architecture analysis revealed that most of these lectin gene sequences are linked to other domains, often belonging to protein families with catalytic activity. Many protein domains identified are known to play a role in stress signaling and defense, suggesting a major contribution of the putative lectins in development and plant defense. This genome-wide screen for different lectin motifs will help to unravel the functional characteristics of lectins. In addition, phylogenetic trees and WebLogos were created and showed that most lectin sequences that share the same domain architecture evolved together. Furthermore, the amino acids responsible for carbohydrate binding are largely conserved. Our results provide information about the evolutionary relationships and functional divergence of the lectin motifs in .
Collapse
|
32
|
Cotrozzi L, Pellegrini E, Guidi L, Landi M, Lorenzini G, Massai R, Remorini D, Tonelli M, Trivellini A, Vernieri P, Nali C. Losing the Warning Signal: Drought Compromises the Cross-Talk of Signaling Molecules in Quercus ilex Exposed to Ozone. FRONTIERS IN PLANT SCIENCE 2017; 8:1020. [PMID: 28674543 PMCID: PMC5475409 DOI: 10.3389/fpls.2017.01020] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2017] [Accepted: 05/29/2017] [Indexed: 05/27/2023]
Abstract
Understanding the interactions between drought and acute ozone (O3) stress in terms of signaling molecules and cell death would improve the predictions of plant responses to climate change. The aim was to investigate whether drought stress influences the responses of plants to acute episodes of O3 exposure. In this study, the behavior of 84 Mediterranean evergreen Quercus ilex plants was evaluated in terms of cross-talk responses among signaling molecules. Half of the sample was subjected to drought (20% of the effective daily evapotranspiration, for 15 days) and was later exposed to an acute O3 exposure (200 nL L-1 for 5 h). First, our results indicate that in well-water conditions, O3 induced a signaling pathway specific to O3-sensitive behavior. Second, different trends and consequently different roles of phytohormones and signaling molecules (ethylene, ET; abscisic acid, ABA; salycilic acid, SA and jasmonic acid, JA) were observed in relation to water stress and O3. A spatial and functional correlation between these signaling molecules was observed in modulating O3-induced responses in well-watered plants. In contrast, in drought-stressed plants, these compounds were not involved either in O3-induced signaling mechanisms or in leaf senescence (a response observed in water-stressed plants before the O3-exposure). Third, these differences were ascribable to the fact that in drought conditions, most defense processes induced by O3 were compromised and/or altered. Our results highlight how Q. ilex plants suffering from water deprivation respond differently to an acute O3 episode compared to well-watered plants, and suggest new effect to be considered in plant responses to environmental changes. This poses the serious question as to whether or not multiple high-magnitude O3 events (as predicted) can change these cross-talk responses, thus opening it up possible further investigations.
Collapse
Affiliation(s)
- Lorenzo Cotrozzi
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Elisa Pellegrini
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Lucia Guidi
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Marco Landi
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Giacomo Lorenzini
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Rossano Massai
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Damiano Remorini
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Mariagrazia Tonelli
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Alice Trivellini
- Institute of Life Sciences, Scuola Superiore Sant’AnnaPisa, Italy
| | - Paolo Vernieri
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Cristina Nali
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| |
Collapse
|
33
|
Van Holle S, De Schutter K, Eggermont L, Tsaneva M, Dang L, Van Damme EJM. Comparative Study of Lectin Domains in Model Species: New Insights into Evolutionary Dynamics. Int J Mol Sci 2017; 18:ijms18061136. [PMID: 28587095 PMCID: PMC5485960 DOI: 10.3390/ijms18061136] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2017] [Revised: 05/20/2017] [Accepted: 05/22/2017] [Indexed: 01/07/2023] Open
Abstract
Lectins are present throughout the plant kingdom and are reported to be involved in diverse biological processes. In this study, we provide a comparative analysis of the lectin families from model species in a phylogenetic framework. The analysis focuses on the different plant lectin domains identified in five representative core angiosperm genomes (Arabidopsisthaliana, Glycine max, Cucumis sativus, Oryza sativa ssp. japonica and Oryza sativa ssp. indica). The genomes were screened for genes encoding lectin domains using a combination of Basic Local Alignment Search Tool (BLAST), hidden Markov models, and InterProScan analysis. Additionally, phylogenetic relationships were investigated by constructing maximum likelihood phylogenetic trees. The results demonstrate that the majority of the lectin families are present in each of the species under study. Domain organization analysis showed that most identified proteins are multi-domain proteins, owing to the modular rearrangement of protein domains during evolution. Most of these multi-domain proteins are widespread, while others display a lineage-specific distribution. Furthermore, the phylogenetic analyses reveal that some lectin families evolved to be similar to the phylogeny of the plant species, while others share a closer evolutionary history based on the corresponding protein domain architecture. Our results yield insights into the evolutionary relationships and functional divergence of plant lectins.
Collapse
Affiliation(s)
- Sofie Van Holle
- Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
| | - Kristof De Schutter
- Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
- Department of Crop Protection, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
| | - Lore Eggermont
- Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
| | - Mariya Tsaneva
- Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
| | - Liuyi Dang
- Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
| | - Els J M Van Damme
- Department of Molecular Biotechnology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Ghent, Belgium.
| |
Collapse
|
34
|
Liu Y, He C. A review of redox signaling and the control of MAP kinase pathway in plants. Redox Biol 2016; 11:192-204. [PMID: 27984790 PMCID: PMC5157795 DOI: 10.1016/j.redox.2016.12.009] [Citation(s) in RCA: 81] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 12/08/2016] [Indexed: 02/02/2023] Open
Abstract
Mitogen-activated protein kinase (MAPK) cascades are evolutionarily conserved modules among eukaryotic species that range from yeast, plants, flies to mammals. In eukaryotic cells, reactive oxygen species (ROS) has both physiological and toxic effects. Both MAPK cascades and ROS signaling are involved in plant response to various biotic and abiotic stresses. It has been observed that not only can ROS induce MAPK activation, but also that disturbing MAPK cascades can modulate ROS production and responses. This review will discuss the potential mechanisms by which ROS may activate and/or regulate MAPK cascades in plants. The role of MAPK cascades and ROS signaling in regulating gene expression, stomatal function, and programmed cell death (PCD) is also discussed. In addition, the relationship between Rboh-dependent ROS production and MAPK activation in PAMP-triggered immunity will be reviewed.
Collapse
Affiliation(s)
- Yukun Liu
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, College of Forestry, Southwest Forestry University, 300 Bailong Si, Kunming 650224, Yunnan, People's Republic of China; Key Laboratory for Forest Genetic and Tree Improvement & Propagation in Universities of Yunnan Province, College of Forestry, Southwest Forestry University, 300 Bailong Si, Kunming 650224, Yunnan, People's Republic of China.
| | - Chengzhong He
- Key Laboratory for Forest Genetic and Tree Improvement & Propagation in Universities of Yunnan Province, College of Forestry, Southwest Forestry University, 300 Bailong Si, Kunming 650224, Yunnan, People's Republic of China
| |
Collapse
|
35
|
Kasten D, Mithöfer A, Georgii E, Lang H, Durner J, Gaupels F. Nitrite is the driver, phytohormones are modulators while NO and H2O2 act as promoters of NO2-induced cell death. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:6337-6349. [PMID: 27811003 DOI: 10.1093/jxb/erw401] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
This study aimed to understand the molecular mechanisms of nitrogen dioxide (NO2)-induced toxicity and cell death in plants. Exposure of Arabidopsis to high concentrations of NO2 induced cell death in a dose-dependent manner. No leaf symptoms were visible after fumigation for 1 h with 10 parts per million (ppm) NO2 However, 20 ppm NO2 caused necrotic lesion formation and 30 ppm NO2 complete leaf collapse, which had already started during the 1 h fumigation period. NO2 fumigation resulted in a massive accumulation of nitrite and in protein modifications by S-nitrosylation and tyrosine nitration. Nitric oxide (NO) at 30 ppm did not trigger leaf damage or any of the effects observed after NO2 fumigation. The onset of NO2-induced cell death correlated with NO and hydrogen peroxide (H2O2) signaling and a decrease in antioxidants. NO- and H2O2-accumulating mutants were more sensitive to NO2 than wild-type plants. Accordingly, experiments with specific scavengers confirmed that NO and H2O2 are essential promoters of NO2-induced cell death. Leaf injection of 100 mM nitrite caused an increase in S-nitrosylation, NO, H2O2, and cell death suggesting that nitrite functioned as a mediator of NO2-induced effects. A targeted screening of phytohormone mutants revealed a protective role of salicylic acid (SA) signaling in response to NO2 It was also shown that phytohormones were modulators rather than inducers of NO2-induced cell death. The established experimental set-up is a suitable system to investigate NO2 and cell death signaling in large-scale mutant screens.
Collapse
Affiliation(s)
- Dörte Kasten
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Axel Mithöfer
- Max Planck Institute for Chemical Ecology, Department Bioorganic Chemistry, Hans-Knöll-Straße 8, D-07745 Jena, Germany
| | - Elisabeth Georgii
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Hans Lang
- Research Unit Environmental Simulation, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Jörg Durner
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Frank Gaupels
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| |
Collapse
|
36
|
Gottardini E, Cristofori A, Pellegrini E, La Porta N, Nali C, Baldi P, Sablok G. Suppression Substractive Hybridization and NGS Reveal Differential Transcriptome Expression Profiles in Wayfaring Tree (Viburnum lantana L.) Treated with Ozone. FRONTIERS IN PLANT SCIENCE 2016; 7:713. [PMID: 27313581 PMCID: PMC4887494 DOI: 10.3389/fpls.2016.00713] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2015] [Accepted: 05/09/2016] [Indexed: 05/29/2023]
Abstract
Tropospheric ozone (O3) is a global air pollutant that causes high economic damages by decreasing plant productivity. It enters the leaves through the stomata, generates reactive oxygen species, which subsequent decrease in photosynthesis, plant growth, and biomass accumulation. In order to identify genes that are important for conferring O3 tolerance or sensitivity to plants, a suppression subtractive hybridization analysis was performed on the very sensitive woody shrub, Viburnum lantana, exposed to chronic O3 treatment (60 ppb, 5 h d(-1) for 45 consecutive days). Transcript profiling and relative expression assessment were carried out in asymptomatic leaves, after 15 days of O3 exposure. At the end of the experiment symptoms were observed on all treated leaves and plants, with an injured leaf area per plant accounting for 16.7% of the total surface. Cloned genes were sequenced by 454-pyrosequencing and transcript profiling and relative expression assessment were carried out on sequenced reads. A total of 38,800 and 12,495 high quality reads obtained in control and O3-treated libraries, respectively (average length of 319 ± 156.7 and 255 ± 107.4 bp). The Ensembl transcriptome yielded a total of 1241 unigenes with a total sequence length of 389,126 bp and an average length size of 389 bp (guanine-cytosine content = 49.9%). mRNA abundance was measured by reads per kilobase per million and 41 and 37 ensembl unigenes showed up- and down-regulation respectively. Unigenes functionally associated to photosynthesis and carbon utilization were repressed, demonstrating the deleterious effect of O3 exposure. Unigenes functionally associated to heat-shock proteins and glutathione were concurrently induced, suggesting the role of thylakoid-localized proteins and antioxidant-detoxification pathways as an effective strategy for responding to O3. Gene Ontology analysis documented a differential expression of co-regulated transcripts for several functional categories, including specific transcription factors (MYB and WRKY). This study demonstrates that a complex sequence of events takes place in the cells at intracellular and membrane level following O3 exposure and elucidates the effects of this oxidative stress on the transcriptional machinery of the non-model plant species V. lantana, with the final aim to provide the molecular supportive knowledge for the use of this plant as O3-bioindicator.
Collapse
Affiliation(s)
- Elena Gottardini
- Fondazione Edmund Mach, Sustainable Agro-Ecosystems and Bioresources Department, Research and Innovation CentreTrento, Italy
| | - Antonella Cristofori
- Fondazione Edmund Mach, Sustainable Agro-Ecosystems and Bioresources Department, Research and Innovation CentreTrento, Italy
| | - Elisa Pellegrini
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Nicola La Porta
- Fondazione Edmund Mach, Sustainable Agro-Ecosystems and Bioresources Department, Research and Innovation CentreTrento, Italy
- MOUNTFOR Project Centre, European Forest InstituteTrento, Italy
- Consiglio Nazionale delle Ricerche, Istituto per la Valorizzazione del Legno e delle Specie ArboreeFlorence, Italy
| | - Cristina Nali
- Department of Agriculture, Food and Environment, University of PisaPisa, Italy
| | - Paolo Baldi
- Fondazione Edmund Mach, Genomics and Biology of Fruit Crops Department, Research and Innovation CentreTrento, Italy
| | - Gaurav Sablok
- Fondazione Edmund Mach, Sustainable Agro-Ecosystems and Bioresources Department, Research and Innovation CentreTrento, Italy
- Plant Functional Biology and Climate Change Cluster (C3), University of Technology SydneySydney, NSW, Australia
| |
Collapse
|
37
|
Mignolet-Spruyt L, Xu E, Idänheimo N, Hoeberichts FA, Mühlenbock P, Brosché M, Van Breusegem F, Kangasjärvi J. Spreading the news: subcellular and organellar reactive oxygen species production and signalling. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:3831-44. [PMID: 26976816 DOI: 10.1093/jxb/erw080] [Citation(s) in RCA: 231] [Impact Index Per Article: 28.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
As plants are sessile organisms that have to attune their physiology and morphology continuously to varying environmental challenges in order to survive and reproduce, they have evolved complex and integrated environment-cell, cell-cell, and cell-organelle signalling circuits that regulate and trigger the required adjustments (such as alteration of gene expression). Although reactive oxygen species (ROS) are essential components of this network, their pathways are not yet completely unravelled. In addition to the intrinsic chemical properties that define the array of interaction partners, mobility, and stability, ROS signalling specificity is obtained via the spatiotemporal control of production and scavenging at different organellar and subcellular locations (e.g. chloroplasts, mitochondria, peroxisomes, and apoplast). Furthermore, these cellular compartments may crosstalk to relay and further fine-tune the ROS message. Hence, plant cells might locally and systemically react upon environmental or developmental challenges by generating spatiotemporally controlled dosages of certain ROS types, each with specific chemical properties and interaction targets, that are influenced by interorganellar communication and by the subcellular location and distribution of the involved organelles, to trigger the suitable acclimation responses in association with other well-established cellular signalling components (e.g. reactive nitrogen species, phytohormones, and calcium ions). Further characterization of this comprehensive ROS signalling matrix may result in the identification of new targets and key regulators of ROS signalling, which might be excellent candidates for engineering or breeding stress-tolerant plants.
Collapse
Affiliation(s)
- Lorin Mignolet-Spruyt
- Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
| | - Enjun Xu
- Division of Plant Biology, Viikki Plant Science Centre, Department of Biosciences, 00014 University of Helsinki, Finland
| | - Niina Idänheimo
- Division of Plant Biology, Viikki Plant Science Centre, Department of Biosciences, 00014 University of Helsinki, Finland
| | - Frank A Hoeberichts
- Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
| | - Per Mühlenbock
- Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
| | - Mikael Brosché
- Division of Plant Biology, Viikki Plant Science Centre, Department of Biosciences, 00014 University of Helsinki, Finland
| | - Frank Van Breusegem
- Department of Plant Systems Biology, VIB, 9052 Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
| | - Jaakko Kangasjärvi
- Division of Plant Biology, Viikki Plant Science Centre, Department of Biosciences, 00014 University of Helsinki, Finland Distinguished Scientist Fellowship Program, College of Science, King Saud University, Riyadh, Saudi Arabia
| |
Collapse
|