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Kumar S, Sharma N, Sopory SK, Sanan-Mishra N. miRNAs and genes as molecular regulators of rice grain morphology and yield. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 207:108363. [PMID: 38281341 DOI: 10.1016/j.plaphy.2024.108363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 12/07/2023] [Accepted: 01/10/2024] [Indexed: 01/30/2024]
Abstract
Rice is one of the most consumed crops worldwide and the genetic and molecular basis of its grain yield attributes are well understood. Various studies have identified different yield-related parameters in rice that are regulated by the microRNAs (miRNAs). MiRNAs are endogenous small non-coding RNAs that silence gene expression during or after transcription. They control a variety of biological or genetic activities in plants including growth, development and response to stress. In this review, we have summarized the available information on the genetic control of panicle architecture and grain yield (number and morphology) in rice. The miRNA nodes that are associated with their regulation are also described while focussing on the central role of miR156-SPL node to highlight the co-regulation of two master regulators that determine the fate of panicle development. Since abiotic stresses are known to negatively affect yield, the impact of abiotic stress induced alterations on the levels of these miRNAs are also discussed to highlight the potential of miRNAs for regulating crop yields.
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Affiliation(s)
- Sudhir Kumar
- Plant RNAi Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
| | - Neha Sharma
- Plant RNAi Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
| | - Sudhir K Sopory
- Plant RNAi Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
| | - Neeti Sanan-Mishra
- Plant RNAi Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi, India.
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2
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Chawla R, Poonia A, Samantara K, Mohapatra SR, Naik SB, Ashwath MN, Djalovic IG, Prasad PVV. Green revolution to genome revolution: driving better resilient crops against environmental instability. Front Genet 2023; 14:1204585. [PMID: 37719711 PMCID: PMC10500607 DOI: 10.3389/fgene.2023.1204585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Accepted: 08/11/2023] [Indexed: 09/19/2023] Open
Abstract
Crop improvement programmes began with traditional breeding practices since the inception of agriculture. Farmers and plant breeders continue to use these strategies for crop improvement due to their broad application in modifying crop genetic compositions. Nonetheless, conventional breeding has significant downsides in regard to effort and time. Crop productivity seems to be hitting a plateau as a consequence of environmental issues and the scarcity of agricultural land. Therefore, continuous pursuit of advancement in crop improvement is essential. Recent technical innovations have resulted in a revolutionary shift in the pattern of breeding methods, leaning further towards molecular approaches. Among the promising approaches, marker-assisted selection, QTL mapping, omics-assisted breeding, genome-wide association studies and genome editing have lately gained prominence. Several governments have progressively relaxed their restrictions relating to genome editing. The present review highlights the evolutionary and revolutionary approaches that have been utilized for crop improvement in a bid to produce climate-resilient crops observing the consequence of climate change. Additionally, it will contribute to the comprehension of plant breeding succession so far. Investing in advanced sequencing technologies and bioinformatics will deepen our understanding of genetic variations and their functional implications, contributing to breakthroughs in crop improvement and biodiversity conservation.
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Affiliation(s)
- Rukoo Chawla
- Department of Genetics and Plant Breeding, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, India
| | - Atman Poonia
- Department of Genetics and Plant Breeding, Chaudhary Charan Singh Haryana Agricultural University, Bawal, Haryana, India
| | - Kajal Samantara
- Institute of Technology, University of Tartu, Tartu, Estonia
| | - Sourav Ranjan Mohapatra
- Department of Forest Biology and Tree Improvement, Odisha University of Agriculture and Technology, Bhubaneswar, Odisha, India
| | - S. Balaji Naik
- Institute of Integrative Biology and Systems, University of Laval, Quebec City, QC, Canada
| | - M. N. Ashwath
- Department of Forest Biology and Tree Improvement, Kerala Agricultural University, Thrissur, Kerala, India
| | - Ivica G. Djalovic
- Institute of Field and Vegetable Crops, National Institute of the Republic of Serbia, Novi Sad, Serbia
| | - P. V. Vara Prasad
- Department of Agronomy, Kansas State University, Manhattan, KS, United States
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3
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KhokharVoytas A, Shahbaz M, Maqsood MF, Zulfiqar U, Naz N, Iqbal UZ, Sara M, Aqeel M, Khalid N, Noman A, Zulfiqar F, Al Syaad KM, AlShaqhaa MA. Genetic modification strategies for enhancing plant resilience to abiotic stresses in the context of climate change. Funct Integr Genomics 2023; 23:283. [PMID: 37642792 DOI: 10.1007/s10142-023-01202-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 07/18/2023] [Accepted: 08/02/2023] [Indexed: 08/31/2023]
Abstract
Enhancing the resilience of plants to abiotic stresses, such as drought, salinity, heat, and cold, is crucial for ensuring global food security challenge in the context of climate change. The adverse effects of climate change, characterized by rising temperatures, shifting rainfall patterns, and increased frequency of extreme weather events, pose significant threats to agricultural systems worldwide. Genetic modification strategies offer promising approaches to develop crops with improved abiotic stress tolerance. This review article provides a comprehensive overview of various genetic modification techniques employed to enhance plant resilience. These strategies include the introduction of stress-responsive genes, transcription factors, and regulatory elements to enhance stress signaling pathways. Additionally, the manipulation of hormone signaling pathways, osmoprotectant accumulation, and antioxidant defense mechanisms is discussed. The use of genome editing tools, such as CRISPR-Cas9, for precise modification of target genes related to stress tolerance is also explored. Furthermore, the challenges and future prospects of genetic modification for abiotic stress tolerance are highlighted. Understanding and harnessing the potential of genetic modification strategies can contribute to the development of resilient crop varieties capable of withstanding adverse environmental conditions caused by climate change, thereby ensuring sustainable agricultural productivity and food security.
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Affiliation(s)
| | - Muhammad Shahbaz
- Department of Botany, University of Agriculture, Faisalabad, Pakistan.
| | | | - Usman Zulfiqar
- Department of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan.
| | - Nargis Naz
- Department of Botany, The Islamia University of Bahawalpur, Bahawalpur, Pakistan
| | - Usama Zafar Iqbal
- Department of Botany, University of Agriculture, Faisalabad, Pakistan
| | - Maheen Sara
- Department of Nutritional Sciences, Government College Women University, Faisalabad, Pakistan
| | - Muhammad Aqeel
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems (SKLHIGA), College of Ecology, Lanzhou University, Lanzhou, 730000, Gansu, People's Republic of China
| | - Noreen Khalid
- Department of Botany, Government College Women University Sialkot, Sialkot, Pakistan
| | - Ali Noman
- Department of Botany, Government College University, Faisalabad, Pakistan
| | - Faisal Zulfiqar
- Department of Horticultural Sciences, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur, Bahawalpur, 63100, Pakistan
| | - Khalid M Al Syaad
- Department of Biology, College of Science, King Khalid University, Abha, 61413, Saudi Arabia
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4
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Bermejo NF, Munné-Bosch S. Mixing chia seeds and sprouts at different developmental stages: a cost-effective way to improve antioxidant vitamin composition. Food Chem 2022; 405:134880. [DOI: 10.1016/j.foodchem.2022.134880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 10/24/2022] [Accepted: 11/03/2022] [Indexed: 11/09/2022]
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5
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Lopes AR, Moraes JS, Martins CDMG. Effects of the herbicide glyphosate on fish from embryos to adults: a review addressing behavior patterns and mechanisms behind them. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2022; 251:106281. [PMID: 36103761 DOI: 10.1016/j.aquatox.2022.106281] [Citation(s) in RCA: 23] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 07/29/2022] [Accepted: 08/24/2022] [Indexed: 06/15/2023]
Abstract
The use of agrochemicals has grown in recent years following the increase in agricultural productivity, to eliminate weeds that can compromise crop yields. The intensive use of these products combined with the lack of treatment of agricultural wastewater is causing contamination of the natural environments, especially the aquatics. Glyphosate [N-(phosphonomethyl) glycine] is the most commonly used herbicide in agriculture worldwide. Studies have shown that this compound is toxic to a variety of fish species at the concentrations of environmental relevance. Glyphosate-based herbicides can affect fish biochemical, physiological, endocrine, and behavioral pathways. Changes in behaviors such as foraging, escaping from predators, and courtship can compromise the survival of species and even communities. The behavior patterns of fish has been shown to be a sensitive tool for risk assessment. In this sense, this review summarizes and discusses the toxic effects of glyphosate and its formulations on the behavior of fish in different life stages. Additionally, behavioral impairments were associated with other negative effects of glyphosate such as energy imbalance, stress responses, AChE inhibition, and physiological and endocrine disturbances, which are evidenced and described in the literature. Graphical abstract.
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Affiliation(s)
- Andressa Rubim Lopes
- Programa de Pós-Graduação em Ciências Fisiológicas, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande - FURG, Rio Grande RS, Brazil.
| | - Jenifer Silveira Moraes
- Programa de Pós-Graduação em Ciências Fisiológicas, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande - FURG, Rio Grande RS, Brazil
| | - Camila de Martinez Gaspar Martins
- Programa de Pós-Graduação em Ciências Fisiológicas, Instituto de Ciências Biológicas, Universidade Federal do Rio Grande - FURG, Rio Grande RS, Brazil
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Uthailak N, Kajiura H, Misaki R, Fujiyama K. Production of recombinant β-glucocerebrosidase in wild-type and glycoengineered transgenic Nicotiana benthamiana root cultures with different N-glycan profiles. J Biosci Bioeng 2022; 133:481-488. [PMID: 35190260 DOI: 10.1016/j.jbiosc.2022.01.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2021] [Revised: 12/27/2021] [Accepted: 01/05/2022] [Indexed: 11/22/2022]
Abstract
Gaucher disease is an inherited lysosomal storage disorder caused by an insufficiency of active β-glucocerebrosidase (GCase). Exogenous recombinant GCase via enzyme replacement therapy is considered the most practical treatment for Gaucher disease. Mannose receptors mediate the efficient uptake of exogenous GCase into macrophages. Thus, terminal mannose residues on N-glycans are essential for the delivery of exogenous GCase. In this study, recombinant GCase was produced in root cultures of wild-type (WT) and glycoengineered transgenic Nicotiana benthamiana with downregulated N-acetylglucosaminyltransferase I expression. Root cultures of WT and glycoengineered transgenic N. benthamiana plants were successfully generated by the induction of plant hormones. Recombinant GCases produced in both root cultures possessed GCase enzyme activity. Purified GCases derived from both root cultures revealed different N-glycan profiles. The WT-derived GCase possessed the predominant plant-type N-glycans, which contain plant-specific sugars-linkages, specifically β1,2-xylose and α1,3-fucose residues. Notably, the mannosidic-type N-glycans with terminal mannose residues were abundant in the purified GCase derived from glycoengineered N. benthamiana root culture. This research provides a promising plant-based system for the production of recombinant GCase with terminal mannose residues on N-glycans.
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Affiliation(s)
| | - Hiroyuki Kajiura
- International Center for Biotechnology, Osaka University, Osaka 565-0871, Japan; Industrial Biotechnology Initiative Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Osaka 565-0871, Japan
| | - Ryo Misaki
- International Center for Biotechnology, Osaka University, Osaka 565-0871, Japan; Industrial Biotechnology Initiative Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Osaka 565-0871, Japan
| | - Kazuhito Fujiyama
- International Center for Biotechnology, Osaka University, Osaka 565-0871, Japan; Industrial Biotechnology Initiative Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Osaka 565-0871, Japan; Osaka University Cooperative Research Station in Southeast Asia (OU:CRS), Faculty of Science, Mahidol University, Bangkok 10400, Thailand.
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Maitra S, Brestic M, Bhadra P, Shankar T, Praharaj S, Palai JB, Shah MMR, Barek V, Ondrisik P, Skalický M, Hossain A. Bioinoculants-Natural Biological Resources for Sustainable Plant Production. Microorganisms 2021; 10:51. [PMID: 35056500 PMCID: PMC8780112 DOI: 10.3390/microorganisms10010051] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2021] [Revised: 12/21/2021] [Accepted: 12/23/2021] [Indexed: 11/22/2022] Open
Abstract
Agricultural sustainability is of foremost importance for maintaining high food production. Irresponsible resource use not only negatively affects agroecology, but also reduces the economic profitability of the production system. Among different resources, soil is one of the most vital resources of agriculture. Soil fertility is the key to achieve high crop productivity. Maintaining soil fertility and soil health requires conscious management effort to avoid excessive nutrient loss, sustain organic carbon content, and minimize soil contamination. Though the use of chemical fertilizers have successfully improved crop production, its integration with organic manures and other bioinoculants helps in improving nutrient use efficiency, improves soil health and to some extent ameliorates some of the constraints associated with excessive fertilizer application. In addition to nutrient supplementation, bioinoculants have other beneficial effects such as plant growth-promoting activity, nutrient mobilization and solubilization, soil decontamination and/or detoxification, etc. During the present time, high energy based chemical inputs also caused havoc to agriculture because of the ill effects of global warming and climate change. Under the consequences of climate change, the use of bioinputs may be considered as a suitable mitigation option. Bioinoculants, as a concept, is not something new to agricultural science, however; it is one of the areas where consistent innovations have been made. Understanding the role of bioinoculants, the scope of their use, and analysing their performance in various environments are key to the successful adaptation of this technology in agriculture.
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Affiliation(s)
- Sagar Maitra
- Department of Agronomy, M.S. Swaminathan School of Agriculture, Centurion University of Technology and Management, Paralakheundi 761 211, India; (S.M.); (T.S.); (S.P.); (J.B.P.)
| | - Marian Brestic
- Department of Plant Physiology, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 01 Nitra, Slovakia;
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food, and Natural Resources, Czech University of Life Sciences Prague, Kamycka 129, 165 00 Prague, Czech Republic;
| | - Preetha Bhadra
- Department of Biotechnology, M.S. Swaminathan School of Agriculture, Centurion University of Technology and Management, Paralakheundi 761 211, India;
| | - Tanmoy Shankar
- Department of Agronomy, M.S. Swaminathan School of Agriculture, Centurion University of Technology and Management, Paralakheundi 761 211, India; (S.M.); (T.S.); (S.P.); (J.B.P.)
| | - Subhashisa Praharaj
- Department of Agronomy, M.S. Swaminathan School of Agriculture, Centurion University of Technology and Management, Paralakheundi 761 211, India; (S.M.); (T.S.); (S.P.); (J.B.P.)
| | - Jnana Bharati Palai
- Department of Agronomy, M.S. Swaminathan School of Agriculture, Centurion University of Technology and Management, Paralakheundi 761 211, India; (S.M.); (T.S.); (S.P.); (J.B.P.)
| | | | - Viliam Barek
- Department of Water Resources and Environmental Engineering, Faculty of Horticulture and Landscape Engineering, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 01 Nitra, Slovakia;
| | - Peter Ondrisik
- Department of Plant Physiology, Slovak University of Agriculture, Tr. A. Hlinku 2, 949 01 Nitra, Slovakia;
| | - Milan Skalický
- Department of Botany and Plant Physiology, Faculty of Agrobiology, Food, and Natural Resources, Czech University of Life Sciences Prague, Kamycka 129, 165 00 Prague, Czech Republic;
| | - Akbar Hossain
- Bangladesh Wheat and Maize Research Institute, Dinajpur 5200, Bangladesh;
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Overexpression of chitinase in the endophyte Phomopsis liquidambaris enhances wheat resistance to Fusarium graminearum. Fungal Genet Biol 2021; 158:103650. [PMID: 34923123 DOI: 10.1016/j.fgb.2021.103650] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Revised: 11/26/2021] [Accepted: 12/04/2021] [Indexed: 11/22/2022]
Abstract
Fusarium head blight (FHB) is a disease that affects wheat crops worldwide and is caused by Fusarium graminearum. Effective and safe strategies for the prevention and treatment of the disease are very limited. Phomopsis liquidambaris, a universal endophyte, can colonize wheat. Two engineered strains, Phomopsis liquidambaris OE-Chi and IN-Chi, were constructed by transformation with a plasmid and integration of a chitinase into the genome, respectively. The OE-Chi and IN-Chi strains could inhibit the expansion of Fusarium sp. in plate confrontation assays in vitro. Colonization of the OE-Chi strain in wheat showed better effects than colonization of the IN-Chi strain and alleviated the inhibition of wheat growth caused by F. graminearum. The shoot length, root length and fresh weight of infected wheat increased by 164.9%, 115.4%, and 190.7%, respectively, when the plants were inoculated with the OE-Chi strain. The peroxidase (POD) activity in the wheat root increased by 38.0%, and it was maintained at a high level in the shoot, which suggested that the OE-Chi strain could enhance the resistance of wheat to F. graminearum. The root and shoot superoxide dismutase (SOD) activities were decreased by 11.8% and 19.0%, respectively, which may be helpful for colonization by the OE-Chi strain. These results suggested that the Phomopsis liquidambaris OE-Chi strain may be a potential endophyte in the biocontrol of FHB.
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Alotaibi SS. Developing specific leaf promoters tools for genetic use in transgenic plants towards food security. Saudi J Biol Sci 2021; 28:5187-5192. [PMID: 34466096 PMCID: PMC8380998 DOI: 10.1016/j.sjbs.2021.05.046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Revised: 05/16/2021] [Accepted: 05/18/2021] [Indexed: 11/28/2022] Open
Abstract
Significant yields enrichments are necessitated for meeting the rapid global growth population together with the expected demanding for food, particularly major crops. Photosynthesis improvement is an unexploited opportunity in research on improving crop yields. However, the lack of sufficient molecular promoters tools leads to the need to explore and analyze native leaf-specified promoters for manipulating photosynthesis activities in plants. Two B. distachyon promoters, sedoheptulose-1, 7-bisphosphatase (SBPase) and fructose-1, 6-bisphosphate aldolase (FBPA), were isolated and cloned into an expression vector upstream of the eYFP reporter gene. The results demonstrate that both promoters actively function in N. benthamiana leaves in both agro-transiently assays, successfully regulating expression specifically to leaf-tissues. Exploring these active promoters could potentially provide new well genetic tools for any transgene expression in plants or leaves to genetically manipulate photosynthesis for yield improvement.
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Affiliation(s)
- Saqer S Alotaibi
- Biotechnology Department, College of Science, Taif University, P.O. BOX 11099, Taif 21944, Saudi Arabia
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Song X, Yan J, Zhang Y, Li H, Zheng A, Zhang Q, Wang J, Bian Q, Shao Z, Wang Y, Qiang S. Gene Flow Risks From Transgenic Herbicide-Tolerant Crops to Their Wild Relatives Can Be Mitigated by Utilizing Alien Chromosomes. FRONTIERS IN PLANT SCIENCE 2021; 12:670209. [PMID: 34177986 PMCID: PMC8231706 DOI: 10.3389/fpls.2021.670209] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Accepted: 05/14/2021] [Indexed: 06/13/2023]
Abstract
Integration of a transgene into chromosomes of the C-genomes of oilseed rape (AACC, 2n = 38) may affect their gene flow to wild relatives, particularly Brassica juncea (AABB, 2n = 36). However, no empiric evidence exists in favor of the C-genome as a safer candidate for transformation. In the presence of herbicide selections, the first- to fourth-generation progenies of a B. juncea × glyphosate-tolerant oilseed rape cross [EPSPS gene insertion in the A-genome (Roundup Ready, event RT73)] showed more fitness than a B. juncea × glufosinate-tolerant oilseed rape cross [PAT gene insertion in the C-genome (Liberty Link, event HCN28)]. Karyotyping and fluorescence in situ hybridization-bacterial artificial chromosome (BAC-FISH) analyses showed that crossed progenies from the cultivars with transgenes located on either A- or C- chromosome were mixoploids, and their genomes converged over four generations to 2n = 36 (AABB) and 2n = 37 (AABB + C), respectively. Chromosome pairing of pollen mother cells was more irregular in the progenies from cultivar whose transgene located on C- than on A-chromosome, and the latter lost their C-genome-specific markers faster. Thus, transgene insertion into the different genomes of B. napus affects introgression under herbicide selection. This suggests that gene flow from transgenic crops to wild relatives could be mitigated by breeding transgenic allopolyploid crops, where the transgene is inserted into an alien chromosome.
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zur Strassen T, Scharf A, Carus G, Carus M. Are New Food and Biomass Technologies More Sustainable? A Review. Ind Biotechnol (New Rochelle N Y) 2020. [DOI: 10.1089/ind.2020.29232.tzs] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
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12
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Ma Y, Fan X. Detection and analysis of soil water content based on experimental reflectance spectrum data. ASIA-PAC J CHEM ENG 2020. [DOI: 10.1002/apj.2507] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Yahong Ma
- School of Information Engineering Xijing University Xi'an 710123 China
| | - Xiaojiao Fan
- School of Information Engineering Xijing University Xi'an 710123 China
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13
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Leng C, Sun B, Liu Z, Zhang L, Wei X, Zhou Y, Meng Y, Lai Y, Dai Y, Zhu Z. An optimized double T-DNA binary vector system for improved production of marker-free transgenic tobacco plants. Biotechnol Lett 2020; 42:641-655. [PMID: 31965394 DOI: 10.1007/s10529-020-02797-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Accepted: 01/12/2020] [Indexed: 12/31/2022]
Abstract
OBJECTIVES In the plant transformation process, marker genes play a vital role in identifying transformed cells from non-transformed cells. However, once transgenic plants have been obtained, the presence of marker genes may provoke public concern about environmental or biosafety issues. In our previous study, a double T-DNA vector system has been developed to obtain marker-free transgenic plants, but the T-DNA left border (LB) and right border (RB) of the vector showed an RB-LB-RB-LB pattern and led to high linkage integration between the selectable marker gene (SMG) and the gene of interest (GOI). To improve this double T-DNA vector system, we inverted the first T-DNA direction such that a LB-RB-RB-LB pattern resulted to avoid transcriptional read-through at the LB and the subsequent linkage transfer of the SMG and GOI. RESULTS We separately inserted the green fluorescent protein (GFP) gene as the GOI and the neomycin phosphotransferase II (NPTII) gene as the SMG in both optimized and original vectors and carried out Agrobacterium-mediated tobacco transformation. Statistical analysis revealed that the linkage frequency was 25.6% in T0 plants transformed with the optimized vector, which is a 42.1% decrease compared with that of the original vector (44.2%). The frequency of obtaining marker-free transgenic plants was 66.7% in T1 plants transformed with the optimized vector, showing a 33.4% increase compared with that of the original vector (50.0%). CONCLUSION Our results demonstrate that the optimized double T-DNA binary vector system is a more effective, economical and time-saving approach for obtaining marker-free transgenic plants.
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Affiliation(s)
- Chunxu Leng
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
- Biotechnology Research Institute, Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China
| | - Bing Sun
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
- Institute of Crop Cultivation and Tillage, Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China
| | - Zheming Liu
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Lei Zhang
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
| | - Xiaoli Wei
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
| | - Yun Zhou
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
| | - Ying Meng
- Institute of Crop Cultivation and Tillage, Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China
| | - Yongcai Lai
- Heilongjiang Academy of Agricultural Sciences, Harbin, 150086, China
| | - Yan Dai
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China.
| | - Zhen Zhu
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, The Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China.
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Yang M, Wen Z, Fazal A, Hua X, Xu X, Yin T, Qi J, Yang R, Lu G, Hong Z, Yang Y. Impact of a G2-EPSPS & GAT Dual Transgenic Glyphosate-Resistant Soybean Line on the Soil Microbial Community under Field Conditions Affected by Glyphosate Application. Microbes Environ 2020; 35:ME20056. [PMID: 33162465 PMCID: PMC7734404 DOI: 10.1264/jsme2.me20056] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Accepted: 09/25/2020] [Indexed: 12/26/2022] Open
Abstract
In the past thirty years, the biosafety of the aboveground part of crops, including horizontal gene transferal through pollen dispersal and hybridization, has been the focus of research; however, microbial communities in the underground part are attracting increasing attention. In the present study, the soybean root-associated bacterial communities of the G2-EPSPS plus GAT transgenic soybean line Z106, its recipient variety ZH10, and Z106 treated with glyphosate (Z106J) were compared at the seedling, flowering, and seed filling stages by high-throughput sequencing of the V4 hypervariable regions of 16S rRNA gene amplicons using Illumina MiSeq. The results obtained showed no significant differences in the alpha/beta diversities of root-associated bacterial communities at the three stages among ZH10, Z106, and Z106J under field growth conditions; however, the relative abundance of four main nitrogen-fixing bacterial genera significantly differed among ZH10, Z106, and Z106J. Ternary plot results indicated that in the root compartment, the proportional contributions of rhizobial nitrogen-fixing Ensifer fredii and Bradyrhizobium elkanii, which exhibit an extremely broad nodulation host range, markedly differed among the three treatments at the three stages. Thus, the present results indicate that transgenic G2-EPSPS and GAT soybean may induce different changes in functional bacterial species in soil, such as E. fredii and B. elkanii, from ZH10, which were compensated for/enriched at the flowering and seed filling stages, respectively, to some extent through as of yet unknown mechanisms by transgenic soybean treated with glyphosate.
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Affiliation(s)
- Minkai Yang
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Zhongling Wen
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Aliya Fazal
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Xiaomei Hua
- Research Center for Soil Pollution Prevention and Control, Nanjing Institute of Environmental Sciences, MEE, Nanjing 210042, China
| | - Xinhong Xu
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Tongming Yin
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
| | - Jinliang Qi
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Rongwu Yang
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Guihua Lu
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
- School of Life Sciences, Huaiyin Normal University, Huaian 223300, China
| | - Zhi Hong
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
| | - Yonghua Yang
- Institute for Plant Molecular Biology, State Key Laboratory of Pharmaceutical Biotechnology, School of Life Sciences, Nanjing University, Nanjing 210023, China
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China
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15
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Chaudhary T, Shukla P. Bioinoculant capability enhancement through metabolomics and systems biology approaches. Brief Funct Genomics 2019; 18:159-168. [PMID: 31232454 DOI: 10.1093/bfgp/elz011] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Revised: 03/30/2019] [Accepted: 04/26/2019] [Indexed: 02/07/2023] Open
Abstract
Bioinoculants are eco-friendly microorganisms, and their products are utilized for improving the potential of soil and fulfill the nutrients requirement for the host plant. The agricultural yield has increased due to the use of bioinoculants over chemical-based fertilizers, and thus it generates interest in understanding the innovation process by various methods. By gene-editing tool, the desired gene product can be changed for engineered microbial inoculants. We have also described various modern biotechnological tools like constraint-based modeling, OptKnock, flux balance analysis and modeling of the biological network for enhancing the bioinoculant capability. These fluxes give the fascinating perception of the metabolic network in the absence of comprehensive kinetic information. These tools also help in the stimulation of the metabolic networks by incorporation of enzyme-encoding genes. The present review explains the use of systems biology and gene-editing tools for improving the capability of bioinoculants. Moreover, this review also emphasizes on the challenges and future perspective of systems biology and its multidisciplinary facets.
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Affiliation(s)
- Twinkle Chaudhary
- Enzyme Technology and Protein Bioinformatics Laboratory, Department of Microbiology, Maharshi Dayanand University, Rohtak, India
| | - Pratyoosh Shukla
- Enzyme Technology and Protein Bioinformatics Laboratory, Department of Microbiology, Maharshi Dayanand University, Rohtak, India
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16
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Dastan S, Ghareyazie B, Pishgar SH. Environmental impacts of transgenic Bt rice and non-Bt rice cultivars in northern Iran. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2019. [DOI: 10.1016/j.bcab.2019.101160] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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17
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Eriksson D, Kershen D, Nepomuceno A, Pogson BJ, Prieto H, Purnhagen K, Smyth S, Wesseler J, Whelan A. A comparison of the EU regulatory approach to directed mutagenesis with that of other jurisdictions, consequences for international trade and potential steps forward. THE NEW PHYTOLOGIST 2019; 222:1673-1684. [PMID: 30548610 DOI: 10.1111/nph.15627] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2018] [Accepted: 12/02/2018] [Indexed: 05/11/2023]
Abstract
A special regulatory regime applies to products of recombinant nucleic acid modifications. A ruling from the European Court of Justice has interpreted this regulatory regime in a way that it also applies to emerging mutagenesis techniques. Elsewhere regulatory progress is also ongoing. In 2015, Argentina launched a regulatory framework, followed by Chile in 2017 and recently Brazil and Colombia. In March 2018, the USDA announced that it will not regulate genome-edited plants differently if they could have also been developed through traditional breeding. Canada has an altogether different approach with their Plants with Novel Traits regulations. Australia is currently reviewing its Gene Technology Act. This article illustrates the deviation of the European Union's (EU's) approach from the one of most of the other countries studied here. Whereas the EU does not implement a case-by-case approach, this approach is taken by several other jurisdictions. Also, the EU court ruling adheres to a process-based approach while most other countries have a stronger emphasis on the regulation of the resulting product. It is concluded that, unless a functioning identity preservation system for products of directed mutagenesis can be established, the deviation results in a risk of asynchronous approvals and disruptions in international trade.
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Affiliation(s)
- Dennis Eriksson
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Box 101, 230 53, Alnarp, Sweden
| | - Drew Kershen
- College of Law, University of Oklahoma, 300 Timberdell Road, Norman, OK, 73019-5081, USA
| | - Alexandre Nepomuceno
- Brazilian Agricultural Research Cooperation - Embrapa, Brazilian Biosafety Technical Commission - CTNBio, PO Box 231, ZIP 86001-970, Londrina, PR, Brazil
| | - Barry J Pogson
- Global Plant Council and ARC Centre of Excellence in Plant Energy Biology, Australian National University, Canberra, 2601, ACT, Australia
| | - Humberto Prieto
- Biotechnology Laboratory, La Platina Station, Instituto de Investigaciones Agropecuarias, Santa Rosa 11610, La Pintana, Santiago de Chile, Chile
| | - Kai Purnhagen
- Law and Governance Group, Department of Social Sciences, Wageningen University, Hollandseweg 1, 6706 KN, Wageningen, the Netherlands
- Rotterdam Institute of Law and Economics, Law School, Erasmus University of Rotterdam, Burg. Oudlaan 50, 3062 PA, Rotterdam, the Netherlands
| | - Stuart Smyth
- Department of Agricultural and Resource Economics, University of Saskatchewan, 51 Campus Drive, Saskatoon, Sask., S7N 5A8, Canada
| | - Justus Wesseler
- Agricultural Economics and Rural Policy Group, Department of Social Sciences, Wageningen University, Hollandseweg 1, 6706 KN, Wageningen, the Netherlands
| | - Agustina Whelan
- Biotechnology Directorate, Ministry of AgroIndustry, Buenos Aires, Argentina
- National University of Quilmes, Bernal, Argentina
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18
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Du D, Jin R, Guo J, Zhang F. Construction of Marker-Free Genetically Modified Maize Using a Heat-Inducible Auto-Excision Vector. Genes (Basel) 2019; 10:genes10050374. [PMID: 31108922 PMCID: PMC6562874 DOI: 10.3390/genes10050374] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2019] [Revised: 05/10/2019] [Accepted: 05/13/2019] [Indexed: 11/30/2022] Open
Abstract
Gene modification is a promising tool for plant breeding, and gradual application from the laboratory to the field. Selectable marker genes (SMG) are required in the transformation process to simplify the identification of transgenic plants; however, it is more desirable to obtain transgenic plants without selection markers. Transgene integration mediated by site-specific recombination (SSR) systems into the dedicated genomic sites has been demonstrated in a few different plant species. Here, we present an auto-elimination vector system that uses a heat-inducible Cre to eliminate the selectable marker from transgenic maize, without the need for repeated transformation or sexual crossing. The vector combines an inducible site-specific recombinase (hsp70::Cre) that allows for the precise elimination of the selectable marker gene egfp upon heating. This marker gene is used for the initial positive selection of transgenic tissue. The egfp also functions as a visual marker to demonstrate the effectiveness of the heat-inducible Cre. A second marker gene for anthocyanin pigmentation (Rsc) is located outside of the region eliminated by Cre and is used for the identification of transgenic offspring in future generations. Using the heat-inducible auto-excision vector, marker-free transgenic maize plants were obtained in a precisely controlled genetic modification process. Genetic and molecular analyses indicated that the inducible auto-excision system was tightly controlled, with highly efficient DNA excision, and provided a highly reliable method to generate marker-free transgenic maize.
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Affiliation(s)
- Dengxiang Du
- National Key Laboratory of Crop Genetic Improvement and College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
| | - Ruchang Jin
- National Key Laboratory of Crop Genetic Improvement and College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
| | - Jinjie Guo
- National Key Laboratory of Crop Genetic Improvement and College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
| | - Fangdong Zhang
- National Key Laboratory of Crop Genetic Improvement and College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
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19
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Pathak BP, Pruett E, Guan H, Srivastava V. Utility of I-SceI and CCR5-ZFN nucleases in excising selectable marker genes from transgenic plants. BMC Res Notes 2019; 12:272. [PMID: 31088537 PMCID: PMC6518718 DOI: 10.1186/s13104-019-4304-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Accepted: 05/04/2019] [Indexed: 11/21/2022] Open
Abstract
Objectives Removal of selection marker genes from transgenic plants is highly desirable for their regulatory approval and public acceptance. This study evaluated the use of two nucleases, the yeast homing endonuclease, I-SceI, and the designed zinc finger nuclease, CCR5-ZFN, in excising marker genes from plants using rice and Arabidopsis as the models. Results In an in vitro culture assay, both nucleases were effective in precisely excising the DNA fragments marked by the nuclease target sites. However, rice cultures were found to be refractory to transformation with the I-SceI and CCR5-ZFN overexpressing constructs. The inducible I-SceI expression was also problematic in rice as the progeny of the transgenic lines expressing the heat-inducible I-SceI did not inherit the functional gene. On the other hand, heat-inducible I-SceI expression in Arabidopsis was effective in creating somatic excisions in transgenic plants but ineffective in generating heritable excisions. The inducible expression of CCR5-ZFN in rice, although transmitted stably to the progeny, appeared ineffective in creating detectable excisions. Therefore, toxicity of these nucleases in plant cells poses major bottleneck in their application in plant biotechnology, which could be avoided by expressing them transiently in cultures in vitro. Electronic supplementary material The online version of this article (10.1186/s13104-019-4304-2) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Bhuvan P Pathak
- Dept. of Crop, Soil & Environmental Sciences, University of Arkansas, Fayetteville, AR, USA.,Cell and Molecular Biology Program, University of Arkansas, Fayetteville, AR, USA
| | - Eliott Pruett
- Dept. of Crop, Soil & Environmental Sciences, University of Arkansas, Fayetteville, AR, USA.,Cell and Molecular Biology Program, University of Arkansas, Fayetteville, AR, USA
| | - Huazhong Guan
- Dept. of Crop, Soil & Environmental Sciences, University of Arkansas, Fayetteville, AR, USA.,Fujian Provincial Key Laboratory of Crop Breeding, Fujian Agricultural & Forestry University, Fuzhou, China
| | - Vibha Srivastava
- Dept. of Crop, Soil & Environmental Sciences, University of Arkansas, Fayetteville, AR, USA. .,Cell and Molecular Biology Program, University of Arkansas, Fayetteville, AR, USA. .,Dept. of Horticulture, University of Arkansas, Fayetteville, AR, USA.
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20
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Wang X, Cai M, Zhou Y. Biological influence of cry1Ab gene insertion on the endophytic bacteria community in transgenic rice. Turk J Biol 2019; 42:231-239. [PMID: 30814885 DOI: 10.3906/biy-1708-32] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022] Open
Abstract
The commercial release of genetically modified (GMO) rice for insect control in China is a subject of debate. Although a series of studies have focused on the safety evaluation of the agroecosystem, the endophytes of transgenic rice are rarely considered. Here, the influence of endophyte populations and communities was investigated and compared for transgenic and nontransgenic rice. Population-level investigation suggested that cry1Ab gene insertion influenced to a varying degree the rice endophytes at the seedling stage, but a significant difference was only observed in leaves of Bt22 (Zhejiang22 transgenic rice) between the GMO and wild-type rice. Community-level analysis using the 16S rRNA gene showed that strains of the phyla Proteobacteria and Firmicutes were the predominant groups occurring in the three transgenic rice plants and their corresponding parents. By contrast, the endophytic communities of Minghui63 and Xiushui11 showed a weaker response to cry1Ab gene insertion than did Zhejiang22, and the community results were consistent with the population-level investigation. The populations and communities of rice endophytes were affected by the cry1Ab gene to a different extent in different rice varieties and plant tissues. The results of this study broaden our understanding of unexpected transgenic influences on nontarget organisms.
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Affiliation(s)
- Xu Wang
- State Key Laboratory of Tea Plant Biology and Utilization, School of Tea and Food Science Technology, Anhui Agricultural University , Heifei , P.R. China
| | - Mengyu Cai
- State Key Laboratory of Tea Plant Biology and Utilization, School of Tea and Food Science Technology, Anhui Agricultural University , Heifei , P.R. China
| | - Yu Zhou
- State Key Laboratory Breeding Base for Zhejiang Sustainable Plant Pest Control, Agricultural Ministry Key Laboratory for Pesticide Residue Detection, Zhejiang Province Key Laboratory for Food Safety, Institute of Quality and Standard for Agro-products, Zhejiang Academy of Agricultural Sciences , Hangzhou , P.R. China.,State Key Laboratory of Tea Plant Biology and Utilization, School of Tea and Food Science Technology, Anhui Agricultural University , Heifei , P.R. China
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21
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Li Z, Cui J, Mi Z, Tian D, Wang J, Ma Z, Wang B, Chen HYH, Niu S. Responses of soil enzymatic activities to transgenic Bacillus thuringiensis (Bt) crops - A global meta-analysis. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 651:1830-1838. [PMID: 30317171 DOI: 10.1016/j.scitotenv.2018.10.073] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Revised: 10/03/2018] [Accepted: 10/06/2018] [Indexed: 05/26/2023]
Abstract
Transgenic Bacillus thuringiensis (Bt) crops have been widely planted, and the resulting environmental risks have attracted extensive attention. To foresee the impacts of Bt crops on soil quality, it is essential to understand how Bt crops alter the soil enzymatic activities and what the important influencing factors are. We compiled data from 41 published papers that studied soil enzymatic activities with Bt crops and their non-Bt counterparts. The results showed that dehydrogenase and urease significantly increased, but neutral phosphatase significantly decreased under Bt crop cultivations without Bt residues incorporation. The activities of dehydrogenase, β-glucosidase, urease, nitrate reductase, alkaline phosphatase, and aryl sulfatase significantly increased under Bt crop cultivation with Bt residues incorporation. The response ratios of other enzymes were not significantly changed. Generally, the response ratios of soil enzymes were greater with Bt residues incorporation than those of Bt crop cultivations without Bt residues incorporation. Further, the response ratios of soil enzymes varied with Bt crop types and growth periods. It was the strongest under Bt cotton among Bt crops, and the significant responses usually appeared in the middle growth stages. The responses of soil enzymes ascribed more to the properties of Bt crops than to soil properties across sites. Given - significant responses of some soil enzymes to Bt crops, we recommended that soil environmental risks should be carefully evaluated over the transgenic crops.
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Affiliation(s)
- Zhaolei Li
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, PR China.
| | - Jun Cui
- Jiangsu Provincial Key Laboratory for Bioresources of Coastal Saline Soils, Jiangsu Coastal Biological Agriculture Synthetic Innovation Center, Yancheng Teachers' University, Yancheng 224002, PR China
| | - Zhaorong Mi
- Henan Institute of Science and Technology, Xinxiang 453003, Henan, PR China
| | - Dashuan Tian
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, PR China.
| | - Jinsong Wang
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, PR China.
| | - Zilong Ma
- Faculty of Natural Resources Management, Lakehead University, 955 Oliver Road, Thunder Bay, ON P7B 5E1, Canada.
| | - Bingxue Wang
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, PR China.
| | - Han Y H Chen
- Faculty of Natural Resources Management, Lakehead University, 955 Oliver Road, Thunder Bay, ON P7B 5E1, Canada.
| | - Shuli Niu
- Key Laboratory of Ecosystem Network Observation and Modelling, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, PR China; Department of Environment and Resources, University of Chinese Academy of Sciences, Beijing 100049, PR China..
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22
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Zhang J, Kang Y, Valverde BE, Dai W, Song X, Qiang S. Feral rice from introgression of weedy rice genes into transgenic herbicide-resistant hybrid-rice progeny. JOURNAL OF EXPERIMENTAL BOTANY 2018; 69:3855-3865. [PMID: 29873749 DOI: 10.1093/jxb/ery210] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2017] [Accepted: 06/04/2018] [Indexed: 06/08/2023]
Abstract
Pollen-mediated transgenic flow of herbicide resistance occurs bidirectionally between transgenic cultivated rice and weedy rice. The potential risk of weedy traits introgressing into hybrid rice has been underestimated and is poorly understood. In this study, two glufosinate-resistant transgenic rice varieties, hybrid rice (F1), and their succeeding generations (F2-F4) were planted for 3 years in field plots free of weedy rice adjacent to experimental weedy-rice fields. Weedy-rice-like (feral) plants that were both glufosinate-resistant and had red-pericarp seed were initially found only among the F3 generations of the two glufosinate-resistant transgenic hybrid cultivars. The composite fitness (an index based on eight productivity and weediness traits) of the feral progeny was significantly higher than that of the glufosinate-resistant transgenic hybrid (the original female parent of the feral progeny) under monoculture common garden conditions. The hybrid rice progeny segregated into individuals of variable height and extended flowering. The hybrid rice F2 generations had higher outcrossing rates by pollen reception (0.96-1.65%) than their progenitors (0.07-0.98%). The results show that herbicide-resistant weedy rice can rapidly arise by pollen-mediated gene flow from weedy to transgenic hybrid rice, and their segregating pollen-receptive progeny pose a greater agro-ecological risk than transgenic varieties. The safety assessment and management regulations for transgenic hybrid rice should take into account the risk of bidirectional gene flow.
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Affiliation(s)
- Jingxu Zhang
- Weed Research Laboratory of Nanjing Agricultural University, Xuanwu District, Nanjing, China
| | - Ye Kang
- Weed Research Laboratory of Nanjing Agricultural University, Xuanwu District, Nanjing, China
| | - Bernal E Valverde
- Weed Research Laboratory of Nanjing Agricultural University, Xuanwu District, Nanjing, China
- Investigación y Desarrollo en Agricultura Tropical, S.A., Tambor, Alajuela, Costa Rica
| | - Weimin Dai
- Weed Research Laboratory of Nanjing Agricultural University, Xuanwu District, Nanjing, China
| | - Xiaoling Song
- Weed Research Laboratory of Nanjing Agricultural University, Xuanwu District, Nanjing, China
| | - Sheng Qiang
- Weed Research Laboratory of Nanjing Agricultural University, Xuanwu District, Nanjing, China
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23
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Abstract
Existing literature demonstrates agro-chemicals result in physical toxicity and damages human health, flora and fauna. However, little is known about how such ‘toxicity’ relates to mental well-being and social suffering. This paper aims to demonstrate how local, national and international vectors are interlinked to shape social distress among cotton farmers in India. Ethnographic interviews and focus group discussions were conducted in a cotton-growing village of the Warangal district, Telangana state, India. The results advance the concept of counter therapeutic spaces and hypothesise that toxic landscapes emerge through a dynamic interaction between dispersed agencies that interact and reconfigure agricultural spaces into socially toxic places. The paper argues that the disciplines of public health and agriculture suffer from a failure of imagination to forge vital interdisciplinary links that could address farmer suffering. Unpacking local ecologies of farmer suffering offer innovative ways for enhancing mental health policy and interventions in India.
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Affiliation(s)
| | - Sushrut Jadhav
- b Division of Psychiatry , University College London , UK
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24
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Niu L, Tian Z, Liu H, Zhou H, Ma W, Lei C, Chen L. Transgenic Bt cotton expressing Cry1Ac/Cry2Ab or Cry1Ac/EPSPS does not affect the plant bug Adelphocoris suturalis or the pollinating beetle Haptoncus luteolus. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2018; 234:788-793. [PMID: 29247941 DOI: 10.1016/j.envpol.2017.11.047] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Revised: 10/23/2017] [Accepted: 11/12/2017] [Indexed: 05/25/2023]
Abstract
The widespread cultivation of transgenic Bt cotton makes assessing the potential effects of this recombinant crop on non-target organisms a priority. However, the effect of Bt cotton on many insects is currently virtually unknown. The plant bug Adelphocoris suturalis is now a major pest of cotton in southern China and the beetle Haptoncus luteolus is one of the most ancient cotton pollinators. We conducted laboratory experiments to evaluate the toxicity of the Bt cotton varieties ZMSJ, which expresses the toxins Cry1Ac and Cry2Ab, and ZMKCKC, which expresses Cry1Ac and EPSPS, on adult A. suturalis and H. luteolus. No significant increase in the mortality of either species was detected after feeding on Bt cotton leaves or pollen for 7 days. Trace amounts of Cry1Ac and Cry2Ab proteins could be detected in both species but in vitro binding experiments found no evidence of Cry1Ac and Cry2Ab binding proteins. These results demonstrate that feeding on the leaves or pollen of these two Bt cotton varieties has no toxic effects on adult A. suturalis or H. luteolus.
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Affiliation(s)
- Lin Niu
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China
| | - Zhenya Tian
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China
| | - Hui Liu
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China
| | - Hao Zhou
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China
| | - Weihua Ma
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China
| | - Chaoliang Lei
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China
| | - Lizhen Chen
- Hubei Insect Resources Utilization and Sustainable Pest Management Key Laboratory, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, Hubei, China.
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25
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Risk associated with off-target plant genome editing and methods for its limitation. Emerg Top Life Sci 2017; 1:231-240. [PMID: 33525760 PMCID: PMC7288994 DOI: 10.1042/etls20170037] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Revised: 09/13/2017] [Accepted: 09/19/2017] [Indexed: 12/26/2022]
Abstract
Assessment for potential adverse effects of plant genome editing logically focuses on the specific characteristics of the derived phenotype and its release environment. Genome-edited crops, depending on the editing objective, can be classified as either indistinguishable from crops developed through conventional plant breeding or as crops which are transgenic. Therefore, existing regulatory regimes and risk assessment procedures accommodate genome-edited crops. The ability for regulators and the public to accept a product focus in the evaluation of genome-edited crops will depend on research which clarifies the precision of the genome-editing process and evaluates unanticipated off-target edits from the process. Interpretation of genome-wide effects of genome editing should adhere to existing frameworks for comparative risk assessment where the nature and degree of effects are considered relative to a baseline of genome-wide mutations as found in crop varieties developed through conventional breeding methods. Research addressing current uncertainties regarding unintended changes from plant genome editing, and adopting procedures that clearly avoid the potential for gene drive initiation, will help to clarify anticipated public and regulatory questions regarding risk of crops derived through genome editing.
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26
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Kahlon JG, Jacobsen HJ, Cahill JF, Hall LM. Antifungal genes expressed in transgenic pea (Pisum sativum L.) do not affect root colonization of arbuscular mycorrhizae fungi. MYCORRHIZA 2017; 27:683-694. [PMID: 28608039 DOI: 10.1007/s00572-017-0781-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 05/21/2017] [Indexed: 06/07/2023]
Abstract
Genetically modified crops have raised concerns about unintended consequences on non-target organisms including beneficial soil associates. Pea transformed with four antifungal genes 1-3 β glucanase, endochitinase, polygalacturonase-inhibiting proteins, and stilbene synthase is currently under field-testing for efficacy against fungal diseases in Canada. Transgenes had lower expression in the roots than leaves in greenhouse experiment. To determine the impact of disease-tolerant pea or gene products on colonization by non-target arbuscular mycorrhizae and nodulation by rhizobium, a field trial was established. Transgene insertion, as single gene or stacked genes, did not alter root colonization by arbuscular mycorrhiza fungus (AMF) or root nodulation by rhizobium inoculation in the field. We found no effect of transgenes on the plant growth and performance although, having a dual inoculant with both AMF and rhizobium yielded higher fresh weight shoot-to-root ratio in all the lines tested. This initial risk assessment of transgenic peas expressing antifungal genes showed no deleterious effect on non-target organisms.
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Affiliation(s)
- Jagroop Gill Kahlon
- Agricultural, Food and Nutritional Sciences, 410 Agriculture/Forestry, University of Alberta, Edmonton, T6K 2P5, Canada.
| | - Hans-Jörg Jacobsen
- Institute for Plant Genetics, Section of Plant Biotechnology, Gottfried Wilhelm Leibniz Universität Hannover, Herrenhäuser Str. 2, 30419, Hannover, Germany
| | - James F Cahill
- Department of Biological sciences, B717a, Biological Sciences Bldg., University of Alberta, Edmonton, Alberta, T6G 2E9, Canada
| | - Linda M Hall
- Agricultural, Food and Nutritional Sciences, 410 Agriculture/Forestry, University of Alberta, Edmonton, T6K 2P5, Canada
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Assessing the effects of Cry1C rice and Cry2A rice to Pseudogonatopus flavifemur, a parasitoid of rice planthoppers. Sci Rep 2017; 7:7838. [PMID: 28798310 PMCID: PMC5552772 DOI: 10.1038/s41598-017-08173-w] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2017] [Accepted: 07/07/2017] [Indexed: 11/16/2022] Open
Abstract
Transgenic rice producing insecticidal proteins from Bacillus thuringiensis (Bt) could help protect the plants from damage by lepidopteran pests. However, one concern is the potential of Bt rice to harm non-target natural enemies, which play a vital role in pest control. In the present study, the potential effects of Cry1C rice and Cry2A rice on different life-table parameters and population dynamics of Pseudogonatopus flavifemur, a parasitoid of rice planthoppers, were evaluated under laboratory and field condition. The exposure of P. flavifemur to plant-produced Bt proteins was also analyzed. Results indicated that direct feeding on rice plants was the main exposure pathway of P. flavifemur to the Cry1C and Cry2A proteins. No significant difference on the development, survival, longevity, fecundity, and prey consumption of P. flavifemur was detected over two generations between the Bt and non-Bt rice treatments. Furthermore, the population dynamics of P. flavifemur were not affected by Cry1C rice and Cry2A rice. In conclusion, the tested Cry1C rice and Cry2A rice do not appear to harm the parasitoid P. flavifemur.
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Ventura V, Frisio DG, Ferrazzi G, Siletti E. How scary! An analysis of visual communication concerning genetically modified organisms in Italy. PUBLIC UNDERSTANDING OF SCIENCE (BRISTOL, ENGLAND) 2017; 26:547-563. [PMID: 27036664 DOI: 10.1177/0963662516638634] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Several studies provide evidence of the role of written communication in influencing public perception towards genetically modified organisms, whereas visual communication has been sparsely investigated. This article aims to evaluate the exposure of the Italian population to scary genetically modified organism-related images. A set of 517 images collected through Google are classified considering fearful attributes, and an index that accounts for the scary impact of these images is built. Then, through an ordinary least-squares regression, we estimate the relationship between the Scary Impact Index and a set of variables that describes the context in which the images appear. The results reveal that the first (and most viewed) Google result images contain the most frightful contents. In addition, the agri-food sector in Italy is strongly oriented towards offering a negative representation of genetically modified organisms. Exposure to scary images could be a factor that affects the negative perception of genetically modified organisms in Italy.
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Tsatsakis AM, Nawaz MA, Kouretas D, Balias G, Savolainen K, Tutelyan VA, Golokhvast KS, Lee JD, Yang SH, Chung G. Environmental impacts of genetically modified plants: A review. ENVIRONMENTAL RESEARCH 2017; 156:818-833. [PMID: 28347490 DOI: 10.1016/j.envres.2017.03.011] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2017] [Revised: 03/07/2017] [Accepted: 03/08/2017] [Indexed: 06/06/2023]
Abstract
Powerful scientific techniques have caused dramatic expansion of genetically modified crops leading to altered agricultural practices posing direct and indirect environmental implications. Despite the enhanced yield potential, risks and biosafety concerns associated with such GM crops are the fundamental issues to be addressed. An increasing interest can be noted among the researchers and policy makers in exploring unintended effects of transgenes associated with gene flow, flow of naked DNA, weediness and chemical toxicity. The current state of knowledge reveals that GM crops impart damaging impacts on the environment such as modification in crop pervasiveness or invasiveness, the emergence of herbicide and insecticide tolerance, transgene stacking and disturbed biodiversity, but these impacts require a more in-depth view and critical research so as to unveil further facts. Most of the reviewed scientific resources provide similar conclusions and currently there is an insufficient amount of data available and up until today, the consumption of GM plant products are safe for consumption to a greater extent with few exceptions. This paper updates the undesirable impacts of GM crops and their products on target and non-target species and attempts to shed light on the emerging challenges and threats associated with it. Underpinning research also realizes the influence of GM crops on a disturbance in biodiversity, development of resistance and evolution slightly resembles with the effects of non-GM cultivation. Future prospects are also discussed.
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Affiliation(s)
- Aristidis M Tsatsakis
- Department of Toxicology and Forensics, School of Medicine, University of Crete, Heraklion, Crete, Greece; Educational Scientific Center of Nanotechnology, Far Eastern Federal University, Vladivostok 690950, Russian Federation
| | - Muhammad Amjad Nawaz
- Department of Biotechnology, Chonnam National University, Yeosu, Chonnam 59626, Republic of Korea
| | - Demetrios Kouretas
- Department of Biochemistry-Biotechnology, University of Thessaly, Larisa, Greece
| | | | - Kai Savolainen
- Finnish Institute of Occupational Health, POB 40 Helsinki, Finland
| | - Victor A Tutelyan
- Federal Research Centre of Nutrition, Biotechnology and Food Safety, Moscow, Russian Federation
| | - Kirill S Golokhvast
- Educational Scientific Center of Nanotechnology, Far Eastern Federal University, Vladivostok 690950, Russian Federation; Pacific Institute of Geography, FEB RAS, Vladivostok 690041, Russian Federation
| | - Jeong Dong Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea
| | - Seung Hwan Yang
- Department of Biotechnology, Chonnam National University, Yeosu, Chonnam 59626, Republic of Korea
| | - Gyuhwa Chung
- Department of Biotechnology, Chonnam National University, Yeosu, Chonnam 59626, Republic of Korea.
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Zhu S, Xu S, Jing W, Zhao Z, Jiang J. Synthesis and Herbicidal Activities of p-Menth-3-en-1-amine and Its Schiff Base Derivatives. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2016; 64:9702-9707. [PMID: 27976884 DOI: 10.1021/acs.jafc.6b03977] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
p-Menth-3-en-1-amine, 4, and its Schiff base derivatives, 5a-l, were designed and synthesized. They were characterized by FT-IR, ESI+-MS, HRMS, 1H NMR, and 13C NMR spectral analyses, and their pre-emergence herbicidal activities against ryegrass were evaluated. All of the compounds showed excellent herbicidal activity. The Schiff bases showed stronger herbicidal activities than the original amine 4. These compounds showed herbicidal activities comparable to that of glyphosate. The herbicidal activities of 5k and 5l against ryegrass shoot growth were 78.3 and 355.6% higher than that of glyphosate, respectively. Furthermore, the introduction of a chlorine or bromine atom into the Schiff base derivatives containing a furan or benzene ring was beneficial to increase the activity. However, the herbicidal activities were not clearly affected when the heteroatom of the five-membered heterocyclic Schiff base or the position of the substituent on pyridine Schiff base was altered.
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Affiliation(s)
- Shouji Zhu
- Institute of Chemical Industry of Forest Products, CAF; Key and Open Laboratory on Forest Chemical Engineering, SFA , Nanjing 210042, China
- Research Institute of Forestry New Technology, CAF , Beijing 100091, China
- College of Material Science and Technology, Bejing Forestry University , Beijing 100083, China
| | - Shichao Xu
- Institute of Chemical Industry of Forest Products, CAF; Key and Open Laboratory on Forest Chemical Engineering, SFA , Nanjing 210042, China
- Research Institute of Forestry New Technology, CAF , Beijing 100091, China
| | - Wang Jing
- Institute of Chemical Industry of Forest Products, CAF; Key and Open Laboratory on Forest Chemical Engineering, SFA , Nanjing 210042, China
- Research Institute of Forestry New Technology, CAF , Beijing 100091, China
| | - Zhendong Zhao
- Institute of Chemical Industry of Forest Products, CAF; Key and Open Laboratory on Forest Chemical Engineering, SFA , Nanjing 210042, China
- Research Institute of Forestry New Technology, CAF , Beijing 100091, China
| | - Jianxin Jiang
- College of Material Science and Technology, Bejing Forestry University , Beijing 100083, China
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Abstract
Global sustainable development depends on, at least partially, the sustainable development of crop reproduction that provides food, cloth and bioenergy as well certain drugs. During thousands of years of human history, many crops have been domesticated for feeding the world. Perfectly, in the past 2 decades, scientists have innovated biotechnological tools for improving crop yield and quality. For sustainable development, more targets and tools are needed to develop. Among these, microRNA (miRNA) is becoming an emerging target for engineering new crop cultivars with high yield and quality as well tolerance to environmental abiotic and biotic stresses. miRNAs are an extensive class of small regulatory RNAs, which play essential roles in all plant biological and metabolic processes, not only in plant development and growth but also in compound biosynthesis and response to various environmental stress. miRNA-based biotechnology is becoming a new strategy for crop improvement, which will play important role in future agricultural sustainable development.
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Affiliation(s)
- Baohong Zhang
- a Henan Collaborative Innovation Center of Modern Biological Breeding, School of Life Science and Technology, Henan Institute of Science and Technology , Xinxiang , China.,b Department of Biology , East Carolina University , Greenville , NC , US
| | - Qinglian Wang
- a Henan Collaborative Innovation Center of Modern Biological Breeding, School of Life Science and Technology, Henan Institute of Science and Technology , Xinxiang , China
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32
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Abstract
The rapid adoption of transgenic crops in the United States, Argentina, and Canada stands in strong contrast to the situation in the European Union (EU), where a de facto moratorium has been in place since 1998. This article reviews recent scientific literature relevant to the problematic introduction of transgenic crops in the EU to assess if there are specific reasons why transgenic crops have a potentially greater adverse impact on sustainable agriculture in the EU context than elsewhere. Sustainable agriculture integrates three main goals: environmental health, economic profitability, and socioeconomic equity. Transgenic crops do not appear a suitable tool for sustainable agriculture in the EU due to specific environmental, economic, and socioeconomic reasons. Therefore, a moratorium on transgenic crops based on the precautionary principle should be officially adopted until proper risk assessment. In addition, agroecological alternatives to transgenic crops fit better the EU vision of agriculture.
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33
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Dong S, Zhang C, Zhang X, Liu Y, Zhong J, Xie Y, Xu C, Ding Y, Zhang L, Liu X. Production and Characterization of Monoclonal Antibody Broadly Recognizing Cry1 Toxins by Use of Designed Polypeptide as Hapten. Anal Chem 2016; 88:7023-32. [DOI: 10.1021/acs.analchem.6b00429] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sa Dong
- College of Plant Protection, Nanjing Agricultural University, 210095 Nanjing, Jiangsu, People’s Republic of China
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Cunzheng Zhang
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Xiao Zhang
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Yuan Liu
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Jianfeng Zhong
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Yajing Xie
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Chongxin Xu
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Ying Ding
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Liuquan Zhang
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
| | - Xianjin Liu
- College of Plant Protection, Nanjing Agricultural University, 210095 Nanjing, Jiangsu, People’s Republic of China
- Key Laboratory
of Food Quality and Safety of Jiangsu Province, State Key Laboratory
Breeding Base, Key Laboratory of Control Technology and Standard for
Agro-product Safety and Quality, Ministry of Agriculture, and Institute
of Food Quality Safety and Detection Research, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, Jiangsu People’s Republic of China
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Guo WC, Wang ZA, Luo XL, Jin X, Chang J, He J, Tu EX, Tian YC, Si HJ, Wu JH. Development of selectable marker-free transgenic potato plants expressing cry3A against the Colorado potato beetle (Leptinotarsa decemlineata Say). PEST MANAGEMENT SCIENCE 2016; 72:497-504. [PMID: 25820984 DOI: 10.1002/ps.4013] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2014] [Revised: 03/11/2015] [Accepted: 03/23/2015] [Indexed: 06/04/2023]
Abstract
BACKGROUND Elimination of selectable marker genes (SMGs) is important for the safe assessment and commercial use of transgenic plants. The destructive and invasive Colorado potato beetle (CPB) poses a serious threat to potato production. In response to this need, selectable marker-free transgenic potato lines expressing cry3A were developed to control the damage and spread of CPB. RESULTS We simultaneously introduced cry3A and npt II genes harboured in different plasmids into the potato genome using the Agrobacterium-mediated cotransformation method. Four selectable marker-free transgenic potato (CT) lines expressing cry3A were developed by self-crossing segregation and molecular analyses, including Southern blot, western blot and enzyme-linked immunosorbent assay (ELISA) assays. CT lines were used in a resistance bioassay against CPB in the laboratory and field. In the laboratory, CT lines exhibited high resistance to CPB, and 100% mortality of first-instar larvae occurred 6 days after infestation. In the field, untransformed plant leaves were almost entirely consumed, with an average of 155 larvae present per plant 25 days after inoculation. However, CT lines showed no damage symptoms, with approximately 2.5 larvae surviving per plant. CONCLUSION We successfully eliminated SMGs from the transgenic potato lines expressing cry3A in order to decrease CPB damage, control the spread of this pest eastwards and alleviate the concern regarding the safe assessment of regulatory requirements. © 2015 Society of Chemical Industry.
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Affiliation(s)
- Wen-chao Guo
- State Key Laboratory of Plant Genome, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- Institute of Plant Protection, Xinjiang Agricultural Academy of Sciences, Xinjiang, Urumqi, China
| | - Zhi-an Wang
- State Key Laboratory of Plant Genome, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- Institute of Cotton Research, Shanxi Agricultural Academy of Sciences, Shanxi, Yuncheng, China
| | - Xiao-li Luo
- Institute of Cotton Research, Shanxi Agricultural Academy of Sciences, Shanxi, Yuncheng, China
| | - Xin Jin
- State Key Laboratory of Plant Genome, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- College of Biology Science and Technology, Gansu Agricultural University, Gansu, Lanzhou, China
| | - Jing Chang
- State Key Laboratory of Plant Genome, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- College of Biology Science and Technology, Gansu Agricultural University, Gansu, Lanzhou, China
| | - Jiang He
- Institute of Plant Protection, Xinjiang Agricultural Academy of Sciences, Xinjiang, Urumqi, China
| | - Er-xun Tu
- Institute of Plant Protection, Xinjiang Agricultural Academy of Sciences, Xinjiang, Urumqi, China
| | - Ying-chuan Tian
- State Key Laboratory of Plant Genome, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
| | - Huai-jun Si
- College of Biology Science and Technology, Gansu Agricultural University, Gansu, Lanzhou, China
| | - Jia-he Wu
- State Key Laboratory of Plant Genome, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
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35
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Shang Y, Yan Y, Xu W, Tian W, Huang K. Research on Gene Mobility and Gene Flow Between Genetically Modified Mon 15985 Cotton and Pleurotus Ostreatus. J Food Saf 2016. [DOI: 10.1111/jfs.12267] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ying Shang
- Beijing Laboratory for Food Quality and Safety, College of Food Science and Nutritional Engineering; China Agricultural University; Beijing 100083 China
- Yunnan Food Safety Institute, Kunming University of Science and Technology; Kunming 650500 China
| | - Yan Yan
- Beijing Laboratory for Food Quality and Safety, College of Food Science and Nutritional Engineering; China Agricultural University; Beijing 100083 China
| | - Wentao Xu
- Beijing Laboratory for Food Quality and Safety, College of Food Science and Nutritional Engineering; China Agricultural University; Beijing 100083 China
- The Supervision, Inspection & Testing Center of Genetically Modified Food Safety, Ministry of Agriculture; Beijing 100083 China
| | - Wenying Tian
- The Supervision, Inspection & Testing Center of Genetically Modified Food Safety, Ministry of Agriculture; Beijing 100083 China
| | - Kunlun Huang
- Beijing Laboratory for Food Quality and Safety, College of Food Science and Nutritional Engineering; China Agricultural University; Beijing 100083 China
- The Supervision, Inspection & Testing Center of Genetically Modified Food Safety, Ministry of Agriculture; Beijing 100083 China
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36
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Sekan AS, Isayenkov SV, Blume YB. Development of marker-free transformants by site-specific recombinases. CYTOL GENET+ 2015. [DOI: 10.3103/s0095452715060080] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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37
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Akinbo O, Hancock JF, Makinde D. Relevance of Crop Biology for Environmental Risk Assessment of Genetically Modified Crops in Africa. Front Bioeng Biotechnol 2015; 3:150. [PMID: 26501055 PMCID: PMC4598851 DOI: 10.3389/fbioe.2015.00150] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2015] [Accepted: 09/18/2015] [Indexed: 11/24/2022] Open
Abstract
Knowledge about the crop biology of economic crops in Africa is needed for regulators to accurately review dossiers and conduct comprehensive environmental risk assessments (ERAs). This information allows regulators to decide whether biotech crops present a risk to biodiversity, since crossing between domesticated crops and their wild relatives could affect the adaptations of the wild species. The criteria that should be used in the evaluation of African crops for ERA include growth habit, center of origin, center of genetic diversity, proximity of wild relatives, inter-fertility, mode of pollen dispersal, length of pollen viability, mating system, invasiveness, weediness, mode of propagation, mode of seed dispersal, and length of seed dormancy. In this paper, we discuss the crops being genetic engineered in Africa and describe the crop biology of those with native relatives.
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Affiliation(s)
- Olalekan Akinbo
- NEPAD Agency African Biosafety Network of Expertise (ABNE) , Kampala , Uganda
| | - James F Hancock
- Department of Horticulture, Michigan State University , East Lansing, MI , USA
| | - Diran Makinde
- NEPAD Agency African Biosafety Network of Expertise (ABNE) , Ouagadougou , Burkina Faso
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38
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Screening for recombinants of Crambe abyssynica after transformation by the pMF1 marker-free vector based on chemical selection and meristematic regeneration. Sci Rep 2015; 5:14033. [PMID: 26358007 PMCID: PMC4566089 DOI: 10.1038/srep14033] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2015] [Accepted: 08/14/2015] [Indexed: 12/02/2022] Open
Abstract
The T-DNA region of pMF1 vector of marker-free system developed by Wageningen UR, has Recombinase R-LBD gene fusion and nptII and codA gene fusion between two recombination sites. After transformation applying dexamethasone (DEX) can activate the recombinase to remove the T-DNA fragment between recombination sites. The recombinant ought to be selected on 5-fluorocytocine (5-FC) because of codA converting 5-FC into 5-fluorouracil the toxic. A PMF1 vector was transformed into hexaploid species Crambe abyssinica. Two independent transformants were chosen for DEX-induced recombination and later 5-FC selection. In contrast to earlier pMF1 experiments, the strategy of stepwise selection based on meristematic regeneration was engaged. After a long period of 5-FC selection, recombinants were obtained successfully, but most of the survivors were wildtype and non-recombinant. The results revealed when applying the PMF1 marker-free system on C. abyssinica, 1) Increasing in the DEX concentration did not correspondingly enhance the success of recombination; 2) both of the DEX-induced recombination and 5-FC negative selection were apparently insufficient which was leading to the extremely high frequency in chimerism occurring for recombinant and non-recombinant cells in tissues; 3) the strategy of stepwise selection based on meristem tissue regeneration was crucial for successfully isolating the recombinant germplasm from the chimera.
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Gusberti M, Klemm U, Meier MS, Maurhofer M, Hunger-Glaser I. Fire Blight Control: The Struggle Goes On. A Comparison of Different Fire Blight Control Methods in Switzerland with Respect to Biosafety, Efficacy and Durability. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2015; 12:11422-47. [PMID: 26378562 PMCID: PMC4586684 DOI: 10.3390/ijerph120911422] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 07/08/2015] [Revised: 08/27/2015] [Accepted: 09/01/2015] [Indexed: 12/03/2022]
Abstract
Fire blight (FB), caused by Erwinia amylovora, is one of the most important pome fruit pathogens worldwide. To control this devastating disease, various chemical and biological treatments are commonly applied in Switzerland, but they fail to keep the infection at an acceptable level in years of heavy disease pressure. The Swiss authorities therefore currently allow the controlled use of the antibiotic streptomycin against FB in years that are predicted to have heavy infection periods, but only one treatment per season is permitted. Another strategy for controlling Erwinia is to breed resistant/tolerant apple cultivars. One way of accelerating the breeding process is to obtain resistant cultivars by inserting one or several major resistance genes, using genetic engineering. To date, no study summarizing the impact of different FB control measures on the environment and on human health has been performed. This study consequently aims to compare different disease-control measures (biological control, chemical control, control by antibiotics and by resistant/tolerant apple cultivars obtained through conventional or molecular breeding) applied against E. amylovora, considering different protection goals (protection of human health, environment, agricultural diversity and economic interest), with special emphasis on biosafety aspects. Information on each FB control measure in relation to the specified protection goal was assessed by literature searches and by interviews with experts. Based on our results it can be concluded that the FB control measures currently applied in Switzerland are safe for consumers, workers and the environment. However, there are several gaps in our knowledge of the human health and environmental impacts analyzed: data are missing (1) on long term studies on the efficacy of most of the analyzed FB control measures; (2) on the safety of operators handling streptomycin; (3) on residue analyses of Equisetum plant extract, the copper and aluminum compounds used in apple production; and (4) on the effect of biological and chemical control measures on non-target fauna and flora. These gaps urgently need to be addressed in the near future.
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Affiliation(s)
- Michele Gusberti
- Institute of Integrative Biology Zurich, Plant Pathology Group, Swiss Federal Institute of Technology, Zurich CH-8092, Switzerland.
| | - Urs Klemm
- Swiss Expert Committee for Biosafety, Bern CH-3003, Switzerland.
| | - Matthias S Meier
- Swiss Expert Committee for Biosafety, Bern CH-3003, Switzerland.
- Research Institute of Organic Agriculture (FiBL), Frick CH-5070, Switzerland.
| | - Monika Maurhofer
- Institute of Integrative Biology Zurich, Plant Pathology Group, Swiss Federal Institute of Technology, Zurich CH-8092, Switzerland.
- Swiss Expert Committee for Biosafety, Bern CH-3003, Switzerland.
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40
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Hamzeh S, Motallebi M, Zamani MR, Moghaddassi Jahromi Z. Selectable Marker Gene Removal and Expression of Transgene by Inducible Promoter Containing FFDD Cis-Acting elements in Transgenic Plants. IRANIAN JOURNAL OF BIOTECHNOLOGY 2015; 13:1-9. [PMID: 28959293 PMCID: PMC5435017 DOI: 10.15171/ijb.1099] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 06/15/2015] [Accepted: 08/18/2015] [Indexed: 11/09/2022]
Abstract
BACKGROUND Selectable marker gene (SMG) systems are critical for generation of transgenic crops. Transgenic crop production without using SMG is not economically feasible. However, SMGs are non-essential once an intact transgenic plant has been established. Elimination of SMGs from transgenic crops both increases public acceptance of GM crops and prepares gene stacking possibility for improvement of complex traits. Synthetic inducible promoters provide an efficient and flexible strategy to regulate transgene expression. OBJECTIVES This study aimed to construct a transformation vector based on Cre/loxP recombination system to enhance efficiency of SMG-free transgenic plant production followed by post-excision expression of gene of interest in transgenic plants by a pathogen inducible promoter. MATERIALS AND METHODS In pG-IPFFDD-creint-gusint construct, cre recombinase and selectable marker gene (nptII) cassettes were placed between the two loxP recognition sites in direct orientation. Seed-specific Napin promoter was used for regulation of Cre expression in transgenic seeds. In the construct, loxP flanked sequence containing nptII and recombinase cassettes, located between a pathogen inducible promoter containing FFDD cis-acting elements and β-glucuronidase coding region. The cunstuct was transformed into Nicotiana tabaccum via Agrobacterium-mediated transformation. RESULTS The results showed that both cre and nptII excision occurs in T1 progeny tobacco plants through seed-specific cre expression. The excisions were confirmed by methods activation of the gus gene, germination test on kanamycin-containing medium and molecular analysis. Inducibility of gus expression by FFDD-containing promoter in T1 leaf tissues was confirmed by histochemical Gus staining assay. CONCLUSIONS The established system is not only an efficient tool for marker gene elimination but also provides possibility for inducible expression of the transgene.
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Affiliation(s)
| | - Mostafa Motallebi
- Department of Agricultural Biotechnology, National Institute of Genetic Engineering and Biotechnology, Tehran, Iran
| | - Mohammad Reza Zamani
- Department of Agricultural Biotechnology, National Institute of Genetic Engineering and Biotechnology, Tehran, Iran
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Mazzoleni S, Bonanomi G, Incerti G, Chiusano ML, Termolino P, Mingo A, Senatore M, Giannino F, Cartenì F, Rietkerk M, Lanzotti V. Inhibitory and toxic effects of extracellular self-DNA in litter: a mechanism for negative plant-soil feedbacks? THE NEW PHYTOLOGIST 2015; 205:1195-1210. [PMID: 25354164 DOI: 10.1111/nph.13121] [Citation(s) in RCA: 93] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2014] [Accepted: 09/23/2014] [Indexed: 05/20/2023]
Abstract
Plant-soil negative feedback (NF) is recognized as an important factor affecting plant communities. The objectives of this work were to assess the effects of litter phytotoxicity and autotoxicity on root proliferation, and to test the hypothesis that DNA is a driver of litter autotoxicity and plant-soil NF. The inhibitory effect of decomposed litter was studied in different bioassays. Litter biochemical changes were evaluated with nuclear magnetic resonance (NMR) spectroscopy. DNA accumulation in litter and soil was measured and DNA toxicity was assessed in laboratory experiments. Undecomposed litter caused nonspecific inhibition of root growth, while autotoxicity was produced by aged litter. The addition of activated carbon (AC) removed phytotoxicity, but was ineffective against autotoxicity. Phytotoxicity was related to known labile allelopathic compounds. Restricted (13) C NMR signals related to nucleic acids were the only ones negatively correlated with root growth on conspecific substrates. DNA accumulation was observed in both litter decomposition and soil history experiments. Extracted total DNA showed evident species-specific toxicity. Results indicate a general occurrence of litter autotoxicity related to the exposure to fragmented self-DNA. The evidence also suggests the involvement of accumulated extracellular DNA in plant-soil NF. Further studies are needed to further investigate this unexpected function of extracellular DNA at the ecosystem level and related cellular and molecular mechanisms.
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Affiliation(s)
- Stefano Mazzoleni
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Giuliano Bonanomi
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Guido Incerti
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Maria Luisa Chiusano
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Pasquale Termolino
- CNR-IGV, Istituto di Genetica Vegetale, via Università 133, 80055, Portici (NA), Italy
| | - Antonio Mingo
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Mauro Senatore
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Francesco Giannino
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Fabrizio Cartenì
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
| | - Max Rietkerk
- Department of Environmental Sciences, Copernicus Institute, Utrecht University, PO Box 80115, 3508, TC Utrecht, the Netherlands
| | - Virginia Lanzotti
- Dipartimento di Agraria, University of Naples Federico II, via Università 100, 80055, Portici (NA), Italy
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Xia Q, Wen YJ, Wang H, Li YF, Xu HH. β-Glucosidase involvement in the bioactivation of glycosyl conjugates in plants: synthesis and metabolism of four glycosidic bond conjugates in vitro and in vivo. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:11037-46. [PMID: 25354662 DOI: 10.1021/jf5034575] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Mobile glucose-pesticide conjugates in the phloem are often restricted by decreases in biological activity. However, plants can bioactivate endogenous glucosides, which are assumed as able to bioactivate exogenous conjugates. In this study, four glycosidic bonds (O-, S-, N-, and C-glycosidic bonds) of glucose-pesticide conjugates were designed and synthesized, and then metabolism assays were carried out in vitro and in vivo. Results showed that β-glucosidases played a role in the hydrolysis of O-glycosidic bond conjugates in Ricinus communis L. The liberated aglycons possessed insecticidal activities against Plutella xylostella L. and Spodoptera litura F. These results could help establish methods of circumventing the mutual exclusivity of phloem mobility and biological activity by hydrolyzing endogenous β-glucosidases.
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Affiliation(s)
- Qing Xia
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources and Key Laboratory of Natural Pesticide and Chemical Biology, Ministry of Education, South China Agricultural University , Guangzhou, Guangdong 510642, People's Republic of China
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Yang CF, Chen KC, Cheng YH, Raja JAJ, Huang YL, Chien WC, Yeh SD. Generation of marker-free transgenic plants concurrently resistant to a DNA geminivirus and a RNA tospovirus. Sci Rep 2014; 4:5717. [PMID: 25030413 PMCID: PMC4101524 DOI: 10.1038/srep05717] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2014] [Accepted: 06/18/2014] [Indexed: 12/14/2022] Open
Abstract
Global threats of ssDNA geminivirus and ss(-)RNA tospovirus on crops necessitate the development of transgenic resistance. Here, we constructed a two-T DNA vector carrying a hairpin of the intergenic region (IGR) of Ageratum yellow vein virus (AYVV), residing in an intron inserted in an untranslatable nucleocapsid protein (NP) fragment of Melon yellow spot virus (MYSV). Transgenic tobacco lines highly resistant to AYVV and MYSV were generated. Accumulation of 24-nt siRNA, higher methylation levels on the IGR promoters of the transgene, and suppression of IGR promoter activity of invading AYVV indicate that AYVV resistance is mediated by transcriptional gene silencing. Lack of NP transcript and accumulation of corresponding siRNAs indicate that MYSV resistance is mediated through post-transcriptional gene silencing. Marker-free progenies with concurrent resistance to both AYVV and MYSV, stably inherited as dominant nuclear traits, were obtained. Hence, we provide a novel way for concurrent control of noxious DNA and RNA viruses with less biosafety concerns.
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Affiliation(s)
- Ching-Fu Yang
- Department of Plant Pathology, National Chung Hsing University, Taichung, Taiwan
- Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
| | - Kuan-Chun Chen
- Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
| | - Ying-Hui Cheng
- Division of Plant Pathology, Taiwan Agriculture Research Institute, Wufeng, Taichung, Taiwan
| | - Joseph A. J. Raja
- Department of Plant Pathology, National Chung Hsing University, Taichung, Taiwan
- NCHU-UCD Plant and Food Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
| | - Ya-Ling Huang
- Department of Plant Pathology, National Chung Hsing University, Taichung, Taiwan
| | - Wan-Chu Chien
- Department of Plant Pathology, National Chung Hsing University, Taichung, Taiwan
| | - Shyi-Dong Yeh
- Department of Plant Pathology, National Chung Hsing University, Taichung, Taiwan
- Agricultural Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
- NCHU-UCD Plant and Food Biotechnology Center, National Chung Hsing University, Taichung, Taiwan
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Ni DH, Li J, Duan YB, Yang YC, Wei PC, Xu RF, Li CR, Liang DD, Li H, Song FS, Ni JL, Li L, Yang JB. Identification and utilization of cleistogamy gene cl7(t) in rice (Oryza sativa L.). JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:2107-2117. [PMID: 24619999 DOI: 10.1093/jxb/eru074] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Gene transformation is an important method for improvement of plants into elite varieties. However, the possibility of gene flow between genetically modified (GM) crops and similar species is a serious public issue that may potentially endanger ecological stability. Cleistogamy is expected to be an ideal genetic tool for preventing transgene propagation from GM crops. A rice mutant, cl7(t), was created by ethyl methanesulfonate mutagenesis. The mutant exhibited cleistogamy, and had closed spikelets, reduced plant height, and altered morphology of the leaves, panicle, and seeds. Anatomical investigations revealed that the cl7(t) mutant contained more vascular bundles and thicker stems than the wild type, which increased the mechanical strength of its internodes, and anti-lodging ability. Further studies demonstrated that the force required to open the lemma and palea was higher in the cl7(t) mutant, and there was weak swelling ability in the lodicules, which leads to cleistogamy. Allelic analyses and complementation tests indicated that cl7(t) was a novel allele of dep2, a mutant that was previously reported to have similar panicle morphology. Sequence analysis showed that cl7(t) had a single nucleotide substitution (C to A) in the third exon that leads to a Ser substitution with a stop codon, giving a truncated DEP2 protein. Quantitative RT-PCR and in situ hybridization tests demonstrated that there was lower CL7(t) expression level in the spikelets and weaker CL7(t) signals in the lodicules of the cl7(t) mutant compared with wild type, which implies that CL7(t) might participate in the development of lodicules. To improve the agronomic traits of cl7(t) to fit the needs of field production, the cl7(t) mutant was crossed with an intermediate-type rice variety named Guanghui102, which bears some important agronomic traits, including increased grain numbers and high rate of seed setting. Through multi-generational pedigree selection, cleistogamy lines with improved economic traits were obtained, which can be used for the selection of ecologically safe GM rice varieties.
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Affiliation(s)
- Da-Hu Ni
- Rice Research Institute, Anhui Academy of Agricultural Sciences, Hefei 230031, PR China
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Elliott GN, Hough RL, Avery LM, Maltin CA, Campbell CD. Environmental risk factors in the incidence of Johne’s disease. Crit Rev Microbiol 2014; 41:488-507. [DOI: 10.3109/1040841x.2013.867830] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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Saldias C, Leiva A, Valderas J, Radic´ D. Environmentally friendly synthesis of noble metal nanoparticles assisted by biodegradable dextran-graft-lactone copolymers. POLYM ADVAN TECHNOL 2014. [DOI: 10.1002/pat.3251] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Cesar Saldias
- Departamento de Química Física, Facultad de Química; Pontificia Universidad Católica de Chile; Casilla 306, Correo 22 Santiago Chile
| | - Angel Leiva
- Departamento de Química Física, Facultad de Química; Pontificia Universidad Católica de Chile; Casilla 306, Correo 22 Santiago Chile
| | - Johanna Valderas
- Departamento de Química Física, Facultad de Química; Pontificia Universidad Católica de Chile; Casilla 306, Correo 22 Santiago Chile
| | - Deodato Radic´
- Departamento de Química Física, Facultad de Química; Pontificia Universidad Católica de Chile; Casilla 306, Correo 22 Santiago Chile
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Electrochemical sensor for multiplex screening of genetically modified DNA: Identification of biotech crops by logic-based biomolecular analysis. Biosens Bioelectron 2013; 50:414-20. [DOI: 10.1016/j.bios.2013.06.044] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2013] [Revised: 06/19/2013] [Accepted: 06/20/2013] [Indexed: 01/11/2023]
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An efficient method for organic acetylation and use of dl-phosphinothricin as a negative selection agent in argE transgenic rice. Biochem Biophys Res Commun 2013; 441:243-8. [DOI: 10.1016/j.bbrc.2013.10.048] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2013] [Accepted: 10/10/2013] [Indexed: 11/21/2022]
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