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Mironov VL, Linkevich EV. Effects of the lunar cycle on ecosystem and heterotrophic respiration in a boreal Sphagnum-dominated peatland. Chronobiol Int 2024:1-12. [PMID: 38888285 DOI: 10.1080/07420528.2024.2365825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Accepted: 06/04/2024] [Indexed: 06/20/2024]
Abstract
The growth of Sphagnum is influenced by the lunar cycle, which suggests a corresponding carbon (C) accumulation rhythm in peatlands. However, this rhythm can only occur if C accumulation from Sphagnum growth is not offset by its total losses through respiration and other processes. To address the uncertainty, through correlation-regression analysis we examine the influence of the lunar cycle on recent measurements of ecosystem (ER) and heterotrophic (Rh) respiration conducted by Järveoja and colleagues on the oligotrophic peatland of Degerö Stormyr. We found that ER and Rh accelerated near the full moon and slowed down near the new moon. The response of the hourly ER to the lunar cycle is significant from 22:00 to 8:00 and is not significant beyond this range. This response was concentrated in the initial and finished phases of the season, but during the middle of the season it disappeared. This behavior could potentially be caused by the high sensitivity of the Sphagnum cover to moonlight, as well as the sensitivity to the lunar cycle of only the nocturnal component ER. During most of the day, the lunar cycle had a significant effect on hourly Rh, with the highest impact observed between 5:00 and 10:00 and at 20:00. The greatest impact occurs during those hours when ER declines, and possibly Sphagnum photosynthetic productivity peaks. The findings suggest a circalunar rhythm of C accumulation in peatlands due to the opposite trends between C accumulation during Sphagnum growth and C losses with respiration during the lunar cycle.
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Affiliation(s)
- Victor L Mironov
- Department of Multidisciplinary Scientific Research of the Karelian Research Centre of the Russian Academy of Sciences, Petrozavodsk, Russia
| | - Elizaveta V Linkevich
- Department of Multidisciplinary Scientific Research of the Karelian Research Centre of the Russian Academy of Sciences, Petrozavodsk, Russia
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2
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Bassett KR, Östlund L, Gundale MJ, Fridman J, Jämtgård S. Forest inventory tree core archive reveals changes in boreal wood traits over seven decades. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 900:165795. [PMID: 37499833 DOI: 10.1016/j.scitotenv.2023.165795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Revised: 07/21/2023] [Accepted: 07/23/2023] [Indexed: 07/29/2023]
Abstract
Boreal forests play an important role in the global carbon (C) cycle, and there is great interest in understanding how they respond to environmental change, including nitrogen (N) and water limitation, which could impact future forest growth and C storage. Utilizing tree cores archived by the Swedish National Forest Inventory, we measured stemwood traits, including stable N and C isotope composition which provides valuable information related to N availability and water stress, respectively, as well as N and C content, and C/N ratio over 1950-2017 in two central Swedish counties covering an area of ca. 55,000 sq. km (n = 1038). We tested the hypothesis that wood traits are changing over time, and that temporal patterns would differ depending on alternative dendrochronological reconstruction methods, i.e. the commonly applied "single tree method" (STM) or a conceptually stronger "multiple tree method" (MTM). Averaged across all MTMs, our data showed that all five wood traits for Picea abies and Pinus sylvestris changed over time. Wood δ15N strongly declined, indicating progressive nitrogen limitation. The decline in δ13C tracked the known atmospheric δ13CO2 signal, suggesting no change in water stress occurred. Additionally, wood N significantly increased, while C and C/N ratios declined over time. Furthermore, wood trait patterns sometimes differed between dendrochronological methods. The most notable difference was for δ15N, where the slope was much shallower for the STM compared to MTMs for both species, indicating that mobility of contemporary N is problematic when using the STM, resulting in substantially less sensitivity to detect historical signals. Our study indicates strong temporal changes in boreal wood traits and also indicates that the field of dendroecology should adopt new methods and archiving practices for studying highly mobile element cycles, such as nitrogen, which are critical for understanding environmental change in high latitude ecosystems.
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Affiliation(s)
- Kelley R Bassett
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, SE901-83 Umeå, Sweden.
| | - Lars Östlund
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, SE901-83 Umeå, Sweden
| | - Michael J Gundale
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, SE901-83 Umeå, Sweden
| | - Jonas Fridman
- Department of Forest Resource Management, Swedish University of Agricultural Sciences, SE901-83 Umeå, Sweden
| | - Sandra Jämtgård
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, SE901-83 Umeå, Sweden
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3
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Dahal K, Milne MA, Gervais T. The enhancement of photosynthetic performance, water use efficiency and potato yield under elevated CO 2 is cultivar dependent. FRONTIERS IN PLANT SCIENCE 2023; 14:1287825. [PMID: 38046606 PMCID: PMC10690597 DOI: 10.3389/fpls.2023.1287825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Accepted: 10/09/2023] [Indexed: 12/05/2023]
Abstract
As a fourth major food crop, potato could fulfill the nutritional demand of the growing population. Understanding how potato plants respond to predicted increase in atmospheric CO2 at the physiological, biochemical and molecular level is therefore important to improve potato productivity. Thus, the main objectives of the present study are to investigate the effects of elevated CO2 on the photosynthetic performance, water use efficiency and tuber yield of various commercial potato cultivars combined with biochemical and molecular analyses. We grew five potato cultivars (AC Novachip, Atlantic, Kennebec, Russet Burbank and Shepody) at either ambient CO2 (400 μmol CO2 mol-1) or elevated (750 μmol CO2 mol-1) CO2. Compared to ambient CO2-grown counterparts, elevated CO2-grown Russet Burbank and Shepody exhibited a significant increase in tuber yield of 107% and 49% respectively, whereas AC Novachip, Atlantic and Kennebec exhibited a 16%, 6% and 44% increment respectively. These differences in CO2-enhancement of tuber yield across the cultivars were mainly associated with the differences in CO2-stimulation of rates of photosynthesis. For instance, elevated CO2 significantly stimulated the rates of gross photosynthesis for AC Novachip (30%), Russet Burbank (41%) and Shepody (28%) but had minimal effects for Atlantic and Kennebec when measured at growth light. Elevated CO2 significantly increased the total tuber number for Atlantic (40%) and Shepody (83%) but had insignificant effects for other cultivars. Average tuber size increased for AC Novachip (16%), Kennebec (30%) and Russet Burbank (80%), but decreased for Atlantic (25%) and Shepody (19%) under elevated versus ambient CO2 conditions. Although elevated CO2 minimally decreased stomatal conductance (6-22%) and transpiration rates (2-36%), instantaneous water use efficiency increased by up to 79% in all cultivars suggesting that enhanced water use efficiency was mainly associated with increased photosynthesis at elevated CO2. The effects of elevated CO2 on electron transport rates, non-photochemical quenching, excitation pressure, and leaf chlorophyll and protein content varied across the cultivars. We did not observe any significant differences in plant growth and morphology in elevated versus ambient CO2-grown plants. Taken all together, we conclude that the CO2-stimulation of photosynthetic performance, water use efficiency and tuber yield of potatoes is cultivar dependent.
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Affiliation(s)
- Keshav Dahal
- Fredericton Research and Development Centre, Agriculture and Agri-Food Canada, Fredericton, NB, Canada
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Lloyd MK, Stein RA, Ibarra DE, Barclay RS, Wing SL, Stahle DW, Dawson TE, Stolper DA. Isotopic clumping in wood as a proxy for photorespiration in trees. Proc Natl Acad Sci U S A 2023; 120:e2306736120. [PMID: 37931112 PMCID: PMC10655223 DOI: 10.1073/pnas.2306736120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Accepted: 09/22/2023] [Indexed: 11/08/2023] Open
Abstract
Photorespiration can limit gross primary productivity in terrestrial plants. The rate of photorespiration relative to carbon fixation increases with temperature and decreases with atmospheric [CO2]. However, the extent to which this rate varies in the environment is unclear. Here, we introduce a proxy for relative photorespiration rate based on the clumped isotopic composition of methoxyl groups (R-O-CH3) in wood. Most methoxyl C-H bonds are formed either during photorespiration or the Calvin cycle and thus their isotopic composition may be sensitive to the mixing ratio of these pathways. In water-replete growing conditions, we find that the abundance of the clumped isotopologue 13CH2D correlates with temperature (18-28 °C) and atmospheric [CO2] (280-1000 ppm), consistent with a common dependence on relative photorespiration rate. When applied to a global dataset of wood, we observe global trends of isotopic clumping with climate and water availability. Clumped isotopic compositions are similar across environments with temperatures below ~18 °C. Above ~18 °C, clumped isotopic compositions in water-limited and water-replete trees increasingly diverge. We propose that trees from hotter climates photorespire substantially more than trees from cooler climates. How increased photorespiration is managed depends on water availability: water-replete trees export more photorespiratory metabolites to lignin whereas water-limited trees either export fewer overall or direct more to other sinks that mitigate water stress. These disparate trends indicate contrasting responses of photorespiration rate (and thus gross primary productivity) to a future high-[CO2] world. This work enables reconstructing photorespiration rates in the geologic past using fossil wood.
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Affiliation(s)
- Max K. Lloyd
- Department of Earth and Planetary Science, University of California, Berkeley, CA94720
- Department of Geosciences, The Pennsylvania State University, University Park, PA16802
| | - Rebekah A. Stein
- Department of Earth and Planetary Science, University of California, Berkeley, CA94720
- Department of Chemistry and Physical Sciences, Quinnipiac University, Hamden, CT06518
| | - Daniel E. Ibarra
- Department of Earth and Planetary Science, University of California, Berkeley, CA94720
- Department of Earth, Environmental, and Planetary Sciences, Brown University, Providence, RI02912
| | - Richard S. Barclay
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC20560
| | - Scott L. Wing
- Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington, DC20560
| | - David W. Stahle
- Department of Geosciences, University of Arkansas, Fayetteville, AR72701
| | - Todd E. Dawson
- Department of Integrative Biology, University of California, Berkeley, CA94720
| | - Daniel A. Stolper
- Department of Earth and Planetary Science, University of California, Berkeley, CA94720
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5
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Yang Q, Liu Z, Houlton BZ, Gao D, Chang Q, Li H, Fan X, Liu B, Bai E. Isotopic evidence for increased carbon and nitrogen exchanges between peatland plants and their symbiotic microbes with rising atmospheric CO 2 concentrations since 15,000 cal. year BP. GLOBAL CHANGE BIOLOGY 2023; 29:1939-1950. [PMID: 36585918 DOI: 10.1111/gcb.16578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 11/29/2022] [Accepted: 12/16/2022] [Indexed: 05/28/2023]
Abstract
Whether nitrogen (N) availability will limit plant growth and removal of atmospheric CO2 by the terrestrial biosphere this century is controversial. Studies have suggested that N could progressively limit plant growth, as trees and soils accumulate N in slowly cycling biomass pools in response to increases in carbon sequestration. However, a question remains over whether longer-term (decadal to century) feedbacks between climate, CO2 and plant N uptake could emerge to reduce ecosystem-level N limitations. The symbioses between plants and microbes can help plants to acquire N from the soil or from the atmosphere via biological N2 fixation-the pathway through which N can be rapidly brought into ecosystems and thereby partially or completely alleviate N limitation on plant productivity. Here we present measurements of plant N isotope composition (δ15 N) in a peat core that dates to 15,000 cal. year BP to ascertain ecosystem-level N cycling responses to rising atmospheric CO2 concentrations. We find that pre-industrial increases in global atmospheric CO2 concentrations corresponded with a decrease in the δ15 N of both Sphagnum moss and Ericaceae when constrained for climatic factors. A modern experiment demonstrates that the δ15 N of Sphagnum decreases with increasing N2 -fixation rates. These findings suggest that plant-microbe symbioses that facilitate N acquisition are, over the long term, enhanced under rising atmospheric CO2 concentrations, highlighting an ecosystem-level feedback mechanism whereby N constraints on terrestrial carbon storage can be overcome.
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Affiliation(s)
- Qiannan Yang
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
| | - Ziping Liu
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, China
| | - Benjamin Z Houlton
- Department of Ecology and Evolutionary Biology and Department of Global Development, Cornell University, Ithaca, New York, USA
| | - Decai Gao
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, China
| | - Qing Chang
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, China
| | - Hongkai Li
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, China
| | - Xianlei Fan
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
| | - Bai Liu
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
| | - Edith Bai
- Key Laboratory of Geographical Processes and Ecological Security of Changbai Mountains, Ministry of Education; School of Geographical Sciences, Northeast Normal University, Changchun, China
- Key Laboratory of Vegetation Ecology, Ministry of Education, Northeast Normal University, Changchun, China
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Baan J, Holloway-Phillips M, Nelson DB, Kahmen A. The metabolic sensitivity of hydrogen isotope fractionation differs between plant compounds. PHYTOCHEMISTRY 2023; 207:113563. [PMID: 36528118 DOI: 10.1016/j.phytochem.2022.113563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 12/10/2022] [Accepted: 12/11/2022] [Indexed: 06/17/2023]
Abstract
Hydrogen stable isotope analyses (δ2H) of plant derived organic compounds are a useful tool for ecological, environmental, and palaeoclimatological research. However, during organic compound synthesis, variable biosynthetic 2H-fractionation has been suggested to occur as a result of changes in plant carbon fluxes. So far, inference has been based on examining the δ2H patterns of plant compounds along environmental gradients, among plant species, and between plant organs. In an alternative approach, we used four plant species with four different types of mutations that cause impaired starch synthesis to assess whether variability in carbon metabolism affects the biosynthetic 2H-fractionation during cellulose, phytol, and acetogenic lipid synthesis. We found that mutants with impaired starch synthesis always had higher cellulose and phytol δ2H values compared to the wild type. By contrast, 2H-fractionation during acetogenic lipid biosynthesis generally did not show strong metabolic sensitivity. We rationalise these differences by considering the biosynthetic pathway of each compound and the likely source of the variable isotope fractionation. In different organic compounds, the sensitivity of variable biosynthetic 2H-fractionation to changes in C-metabolism depends on incorporation of specific H atoms from precursor molecules. As such, we determined that the similar increase in cellulose and phytol δ2H values as an effect of impaired starch synthesis most likely originates in triose-phosphates.
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Affiliation(s)
- Jochem Baan
- University of Basel, Department of Environmental Sciences - Botany, Schönbeinstrasse 6, 4056, Basel, Switzerland.
| | - Meisha Holloway-Phillips
- University of Basel, Department of Environmental Sciences - Botany, Schönbeinstrasse 6, 4056, Basel, Switzerland
| | - Daniel B Nelson
- University of Basel, Department of Environmental Sciences - Botany, Schönbeinstrasse 6, 4056, Basel, Switzerland
| | - Ansgar Kahmen
- University of Basel, Department of Environmental Sciences - Botany, Schönbeinstrasse 6, 4056, Basel, Switzerland
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7
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Mao F, Du H, Zhou G, Zheng J, Li X, Xu Y, Huang Z, Yin S. Simulated net ecosystem productivity of subtropical forests and its response to climate change in Zhejiang Province, China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 838:155993. [PMID: 35584756 DOI: 10.1016/j.scitotenv.2022.155993] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Revised: 04/28/2022] [Accepted: 05/12/2022] [Indexed: 06/15/2023]
Abstract
Net ecosystem productivity (NEP) is an important index that indicates the carbon sequestration capacity of forest ecosystems. However, the effect of climate change on the spatiotemporal variability in NEP is still unclear. Using the Integrated Terrestrial Ecosystem Carbon-budget (InTEC) model, this study takes the typical subtropical forests in the Zhejiang Province, China as an example, simulated the spatiotemporal patterns of forest NEP from 1979 to 2079 based on historically observed climate data (1979-2015) and data from three representative concentration pathway (RCP) scenarios (RCP2.6, RCP4.5, and RCP8.5) provided by the Coupled Model Intercomparison Project 5 (CMIP5). We analyzed the responses of NEP at different forest age classes to the variation in meteorological factors. The NEP of Zhejiang's forests decreased from 1979 to 1985 and then increased from 1985 to 2015, with an annual increase rate of 9.66 g C·m-2·yr-1 and a cumulative NEP of 364.99 Tg·C. Forest NEP decreased from 2016 to 2079; however, the cumulative NEP continued to increase. The simulated cumulative NEP under the RCP2.6, RCP4.5, and RCP8.5 scenarios was 750 Tg·C, 866 Tg·C, and 958 Tg·C, respectively, at the end of 2079. Partial correlation analysis between forest NEP at different age stages and meteorological factors showed that temperature is the key climatic factor that affects the carbon sequestration capacity of juvenile forests (1979-1999), while precipitation is the key climatic factor that affects middle-aged forests (2000-2015) and mature forests (2016-2079). Adopting appropriate management strategies for forests, such as selective cutting of different ages, is critical for the subtropical forests to adapt to climate change and maintain their high carbon sink capacity.
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Affiliation(s)
- Fangjie Mao
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
| | - Huaqiang Du
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China.
| | - Guomo Zhou
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
| | - Junlong Zheng
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
| | - Xuejian Li
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
| | - Yanxin Xu
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
| | - Zihao Huang
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
| | - Shiyan Yin
- State Key Laboratory of Subtropical Silviculture, Zhejiang A & F University, Hangzhou 311300, China; Key Laboratory of Carbon Cycling in Forest Ecosystems and Carbon Sequestration of Zhejiang Province, Zhejiang A & F University, Hangzhou 311300, China; School of Environmental and Resources Science, Zhejiang A & F University, Hangzhou 311300, China
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8
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Holloway-Phillips M, Baan J, Nelson DB, Lehmann MM, Tcherkez G, Kahmen A. Species variation in the hydrogen isotope composition of leaf cellulose is mostly driven by isotopic variation in leaf sucrose. PLANT, CELL & ENVIRONMENT 2022; 45:2636-2651. [PMID: 35609972 DOI: 10.1111/pce.14362] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
Experimental approaches to isolate drivers of variation in the carbon-bound hydrogen isotope composition (δ2 H) of plant cellulose are rare and current models are limited in their application. This is in part due to a lack in understanding of how 2 H-fractionations in carbohydrates differ between species. We analysed, for the first time, the δ2 H of leaf sucrose along with the δ2 H and δ18 O of leaf cellulose and leaf and xylem water across seven herbaceous species and a starchless mutant of tobacco. The δ2 H of sucrose explained 66% of the δ2 H variation in cellulose (R2 = 0.66), which was associated with species differences in the 2 H enrichment of sucrose above leaf water ( ε sucrose <math altimg="urn:x-wiley:01407791:media:pce14362:pce14362-math-0001" wiley:location="equation/pce14362-math-0001.png" xmlns="http://www.w3.org/1998/Math/MathML"><mrow><msub><mtext>\unicode{x003B5}</mtext><mtext>sucrose</mtext></msub></mrow></math> : -126% to -192‰) rather than by variation in leaf water δ2 H itself. ε sucrose <math altimg="urn:x-wiley:01407791:media:pce14362:pce14362-math-0002" wiley:location="equation/pce14362-math-0002.png" xmlns="http://www.w3.org/1998/Math/MathML"><mrow><msub><mtext>\unicode{x003B5}</mtext><mtext>sucrose</mtext></msub></mrow></math> was positively related to dark respiration (R2 = 0.27), and isotopic exchange of hydrogen in sugars was positively related to the turnover time of carbohydrates (R2 = 0.38), but only when ε sucrose <math altimg="urn:x-wiley:01407791:media:pce14362:pce14362-math-0003" wiley:location="equation/pce14362-math-0003.png" xmlns="http://www.w3.org/1998/Math/MathML"><mrow><mrow><msub><mi mathvariant="normal">\unicode{x003B5}</mi><mtext>sucrose</mtext></msub></mrow></mrow></math> was fixed to the literature accepted value of - 171 <math altimg="urn:x-wiley:01407791:media:pce14362:pce14362-math-0004" wiley:location="equation/pce14362-math-0004.png" xmlns="http://www.w3.org/1998/Math/MathML"><mrow><mrow><mo>\unicode{x02212}</mo><mn>171</mn></mrow></mrow></math> ‰. No relation was found between isotopic exchange of hydrogen and oxygen, suggesting large differences in the processes shaping post-photosynthetic fractionation between elements. Our results strongly advocate that for robust applications of the leaf cellulose hydrogen isotope model, parameterization utilizing δ2 H of sugars is needed.
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Affiliation(s)
| | - Jochem Baan
- Department of Environmental Science-Botany, University of Basel, Basel, Switzerland
| | - Daniel B Nelson
- Department of Environmental Science-Botany, University of Basel, Basel, Switzerland
| | - Marco M Lehmann
- Research Unit of Forest Dynamics, Research Group of Ecosystem Ecology, Stable Isotope Research Centre, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmendsorf, Switzerland
| | - Guillaume Tcherkez
- Research School of Biology, College of Science, Australian National University, Canberra, Australian Capital Territory, Australia
- Institut de Recherche en Horticulture et Semences, Université d'Angers, INRAe, Beaucouzé, France
| | - Ansgar Kahmen
- Department of Environmental Science-Botany, University of Basel, Basel, Switzerland
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9
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Gong XY, Ma WT, Yu YZ, Fang K, Yang Y, Tcherkez G, Adams MA. Overestimated gains in water-use efficiency by global forests. GLOBAL CHANGE BIOLOGY 2022; 28:4923-4934. [PMID: 35490304 DOI: 10.1111/gcb.16221] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 05/09/2022] [Accepted: 04/20/2022] [Indexed: 06/14/2023]
Abstract
Increases in terrestrial water-use efficiency (WUE) have been reported in many studies, pointing to potential changes in physiological forcing of global carbon and hydrological cycles. However, gains in WUE are of uncertain magnitude over longer (i.e. >10 years) periods of time largely owing to difficulties in accounting for structural and physiological acclimation. 13 C signatures (i.e. δ13 C) of plant organic matter have long been used to estimate WUE at temporal scales ranging from days to centuries. Mesophyll conductance is a key uncertainty in estimated WUE owing to its influence on diffusion of CO2 to sites of carboxylation. Here we apply new knowledge of mesophyll conductance to 464 δ13 C chronologies in tree-rings of 143 species spanning global biomes. Adjusted for mesophyll conductance, gains in WUE during the 20th century (0.15 ppm year-1 ) were considerably smaller than those estimated from conventional modelling (0.26 ppm year-1 ). Across the globe, mean sensitivity of WUE to atmospheric CO2 was 0.15 ppm ppm-1 . Ratios of internal-to-atmospheric CO2 (on a mole fraction basis; ci /ca ) in leaves were mostly constant over time but differed among biomes and plant taxa-highlighting the significance of both plant structure and physiology. Together with synchronized responses in stomatal and mesophyll conductance, our results suggest that ratios of chloroplastic-to-atmospheric CO2 (cc /ca ) are constrained over time. We conclude that forest WUE may have not increased as much as previously suggested and that projections of future climate forcing via CO2 fertilization may need to be adjusted accordingly.
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Affiliation(s)
- Xiao Ying Gong
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), College of Geographical Sciences, Fujian Normal University, Fuzhou, China
| | - Wei Ting Ma
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), College of Geographical Sciences, Fujian Normal University, Fuzhou, China
| | - Yong Zhi Yu
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), College of Geographical Sciences, Fujian Normal University, Fuzhou, China
| | - Keyan Fang
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), College of Geographical Sciences, Fujian Normal University, Fuzhou, China
| | - Yusheng Yang
- Key Laboratory for Subtropical Mountain Ecology (Ministry of Science and Technology and Fujian Province Funded), College of Geographical Sciences, Fujian Normal University, Fuzhou, China
| | - Guillaume Tcherkez
- Research School of Biology, ANU College of Medicine, Biology and Environment, Australian National University, Canberra, Australia
- Institut de Recherche en Horticulture et Semences, INRAe, Université d'Angers, Beaucouzé, France
| | - Mark A Adams
- Department of Chemistry and Biotechnology, Faculty of Science, Engineering and Technology, Swinburne University of Technology, Melbourne, Victoria, Australia
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10
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Wieloch T. High atmospheric CO 2 concentration causes increased respiration by the oxidative pentose phosphate pathway in chloroplasts. THE NEW PHYTOLOGIST 2022; 235:1310-1314. [PMID: 35575022 PMCID: PMC9546095 DOI: 10.1111/nph.18226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 05/08/2022] [Indexed: 06/15/2023]
Affiliation(s)
- Thomas Wieloch
- Department of Medical Biochemistry and BiophysicsUmeå UniversityUmeå90187Sweden
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11
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Feitosa-Araujo E, da Fonseca-Pereira P, Pena MM, Lana-Costa J, Coelho DG, de Oliveira Silva FM, Medeiros DB, Linka N, Araújo WL, Weber APM, Fernie AR, Nunes-Nesi A. Mitochondrial and peroxisomal NAD + uptake are important for improved photosynthesis and seed yield under elevated CO 2 concentrations. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 111:713-730. [PMID: 35644998 DOI: 10.1111/tpj.15846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Revised: 05/20/2022] [Accepted: 05/24/2022] [Indexed: 06/15/2023]
Abstract
As sessile organisms, plants must adapt their physiology and developmental processes to cope with challenging environmental circumstances, such as the ongoing elevation in atmospheric carbon dioxide (CO2 ) levels. Nicotinamide adenine dinucleotide (NAD+ ) is a cornerstone of plant metabolism and plays an essential role in redox homeostasis. Given that plants impaired in NAD metabolism and transport often display growth defects, low seed production and disturbed stomatal development/movement, we hypothesized that subcellular NAD distribution could be a candidate for plants to exploit the effects of CO2 fertilization. We report that an efficient subcellular NAD+ distribution is required for the fecundity-promoting effects of elevated CO2 levels. Plants with reduced expression of either mitochondrial (NDT1 or NDT2) or peroxisomal (PXN) NAD+ transporter genes grown under elevated CO2 exhibited reduced total leaf area compared with the wild-type while PXN mutants also displayed reduced leaf number. NDT2 and PXN lines grown under elevated CO2 conditions displayed reduced rosette dry weight and lower photosynthetic rates coupled with reduced stomatal conductance. Interestingly, high CO2 doubled seed production and seed weight in the wild-type, whereas the mutants were less responsive to increases in CO2 levels during reproduction, producing far fewer seeds than the wild-type under both CO2 conditions. These data highlight the importance of mitochondrial and peroxisomal NAD+ uptake mediated by distinct NAD transporter proteins to modulate photosynthesis and seed production under high CO2 levels.
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Affiliation(s)
- Elias Feitosa-Araujo
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Paula da Fonseca-Pereira
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Mateus Miranda Pena
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Jaciara Lana-Costa
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Daniel Gomes Coelho
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | | | - David Barbosa Medeiros
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam Golm, Germany
| | - Nicole Linka
- Institute for Plant Biochemistry, Heinrich Heine University, Düsseldorf, Germany
| | - Wagner L Araújo
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
| | - Andreas P M Weber
- Institute for Plant Biochemistry, Heinrich Heine University, Düsseldorf, Germany
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam Golm, Germany
| | - Adriano Nunes-Nesi
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, Minas Gerais, Brazil
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12
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Bazinet Q, Tang L, Bede JC. Impact of Future Elevated Carbon Dioxide on C 3 Plant Resistance to Biotic Stresses. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2022; 35:527-539. [PMID: 34889654 DOI: 10.1094/mpmi-07-21-0189-fi] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Before the end of the century, atmospheric carbon dioxide levels are predicted to increase to approximately 900 ppm. This will dramatically affect plant physiology and influence environmental interactions and, in particular, plant resistance to biotic stresses. This review is a broad survey of the current research on the effects of elevated CO2 (eCO2) on phytohormone-mediated resistance of C3 agricultural crops and related model species to pathogens and insect herbivores. In general, while plants grown in eCO2 often have increased constitutive and induced salicylic acid levels and suppressed induced jasmonate levels, there are exceptions that implicate other environmental factors, such as light and nitrogen fertilization in modulating these responses. Therefore, this review sets the stage for future studies to delve into understanding the mechanistic basis behind how eCO2 will affect plant defensive phytohormone signaling pathways under future predicted environmental conditions that could threaten global food security to inform the best agricultural management practices.[Formula: see text] Copyright © 2022 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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Affiliation(s)
- Quinn Bazinet
- Department of Plant Science, McGill University, 21,111 Lakeshore, Ste-Anne-de-Bellevue, Quebec H9X 3V9, Canada
| | - Lawrence Tang
- Department of Plant Science, McGill University, 21,111 Lakeshore, Ste-Anne-de-Bellevue, Quebec H9X 3V9, Canada
| | - Jacqueline C Bede
- Department of Plant Science, McGill University, 21,111 Lakeshore, Ste-Anne-de-Bellevue, Quebec H9X 3V9, Canada
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13
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Wieloch T, Grabner M, Augusti A, Serk H, Ehlers I, Yu J, Schleucher J. Metabolism is a major driver of hydrogen isotope fractionation recorded in tree-ring glucose of Pinus nigra. THE NEW PHYTOLOGIST 2022; 234:449-461. [PMID: 35114006 PMCID: PMC9306475 DOI: 10.1111/nph.18014] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Accepted: 01/24/2022] [Indexed: 05/13/2023]
Abstract
Stable isotope abundances convey valuable information about plant physiological processes and underlying environmental controls. Central gaps in our mechanistic understanding of hydrogen isotope abundances impede their widespread application within the plant and biogeosciences. To address these gaps, we analysed intramolecular deuterium abundances in glucose of Pinus nigra extracted from an annually resolved tree-ring series (1961-1995). We found fractionation signals (i.e. temporal variability in deuterium abundance) at glucose H1 and H2 introduced by closely related metabolic processes. Regression analysis indicates that these signals (and thus metabolism) respond to drought and atmospheric CO2 concentration beyond a response change point. They explain ≈ 60% of the whole-molecule deuterium variability. Altered metabolism is associated with below-average yet not exceptionally low growth. We propose the signals are introduced at the leaf level by changes in sucrose-to-starch carbon partitioning and anaplerotic carbon flux into the Calvin-Benson cycle. In conclusion, metabolism can be the main driver of hydrogen isotope variation in plant glucose.
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Affiliation(s)
- Thomas Wieloch
- Department of Medical Biochemistry and BiophysicsUmeå University901 87UmeåSweden
| | - Michael Grabner
- Institute of Wood Technology and Renewable MaterialsUniversity of Natural Resources and Life Sciences Vienna3430Tulln an der DonauAustria
| | - Angela Augusti
- Research Institute on Terrestrial EcosystemsNational Research CouncilPorano (TR)05010Italy
| | - Henrik Serk
- Department of Medical Biochemistry and BiophysicsUmeå University901 87UmeåSweden
| | - Ina Ehlers
- Department of Medical Biochemistry and BiophysicsUmeå University901 87UmeåSweden
| | - Jun Yu
- Department of Mathematics and Mathematical StatisticsUmeå University901 87UmeåSweden
| | - Jürgen Schleucher
- Department of Medical Biochemistry and BiophysicsUmeå University901 87UmeåSweden
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14
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Wieloch T, Augusti A, Schleucher J. Anaplerotic flux into the Calvin-Benson cycle: hydrogen isotope evidence for in vivo occurrence in C 3 metabolism. THE NEW PHYTOLOGIST 2022; 234:405-411. [PMID: 35020197 PMCID: PMC9305100 DOI: 10.1111/nph.17957] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2021] [Accepted: 12/22/2021] [Indexed: 05/02/2023]
Abstract
As the central carbon uptake pathway in photosynthetic cells, the Calvin-Benson cycle is among the most important biochemical cycles for life on Earth. A carbon flux of anaplerotic origin (i.e. through the chloroplast-localized oxidative branch of the pentose phosphate pathway) into the Calvin-Benson cycle was proposed recently. Here, we measured intramolecular deuterium abundances in leaf starch of Helianthus annuus grown at varying ambient CO2 concentrations, Ca . Additionally, we modelled deuterium fractionations expected for the anaplerotic pathway and compared modelled with measured fractionations. We report deuterium fractionation signals at H1 and H2 of starch glucose. Below a Ca change point, these signals increase with decreasing Ca consistent with modelled fractionations by anaplerotic flux. Under standard conditions (Ca = 450 ppm corresponding to intercellular CO2 concentrations, Ci , of 328 ppm), we estimate negligible anaplerotic flux. At Ca = 180 ppm (Ci = 140 ppm), more than 10% of the glucose-6-phosphate entering the starch biosynthesis pathway is diverted into the anaplerotic pathway. In conclusion, we report evidence consistent with anaplerotic carbon flux into the Calvin-Benson cycle in vivo. We propose the flux may help to: maintain high levels of ribulose 1,5-bisphosphate under source-limited growth conditions to facilitate photorespiratory nitrogen assimilation required to build-up source strength; and counteract oxidative stress.
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Affiliation(s)
- Thomas Wieloch
- Department of Medical Biochemistry and BiophysicsUmeå UniversityUmeå90187Sweden
| | - Angela Augusti
- Research Institute on Terrestrial EcosystemsNational Research CouncilPorano (TR)05010Italy
| | - Jürgen Schleucher
- Department of Medical Biochemistry and BiophysicsUmeå UniversityUmeå90187Sweden
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15
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CO 2 fertilization of terrestrial photosynthesis inferred from site to global scales. Proc Natl Acad Sci U S A 2022; 119:e2115627119. [PMID: 35238668 PMCID: PMC8915860 DOI: 10.1073/pnas.2115627119] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
The magnitude of the CO2 fertilization effect on terrestrial photosynthesis is uncertain because it is not directly observed and is subject to confounding effects of climatic variability. We apply three well-established eco-evolutionary optimality theories of gas exchange and photosynthesis, constraining the main processes of CO2 fertilization using measurable variables. Using this framework, we provide robust observationally inferred evidence that a strong CO2 fertilization effect is detectable in globally distributed eddy covariance networks. Applying our method to upscale photosynthesis globally, we find that the magnitude of the CO2 fertilization effect is comparable to its in situ counterpart but highlight the potential for substantial underestimation of this effect in tropical forests for many reflectance-based satellite photosynthesis products. Global photosynthesis is increasing with elevated atmospheric CO2 concentrations, a response known as the CO2 fertilization effect (CFE), but the key processes of CFE are not constrained and therefore remain uncertain. Here, we quantify CFE by combining observations from a globally distributed network of eddy covariance measurements with an analytical framework based on three well-established photosynthetic optimization theories. We report a strong enhancement of photosynthesis across the observational network (9.1 gC m−2 year−2) and show that the CFE is responsible for 44% of the gross primary production (GPP) enhancement since the 2000s, with additional contributions primarily from warming (28%). Soil moisture and specific humidity are the two largest contributors to GPP interannual variation through their influences on plant hydraulics. Applying our framework to satellite observations and meteorological reanalysis data, we diagnose a global CO2-induced GPP trend of 4.4 gC m−2 year−2, which is at least one-third stronger than the median trends of 13 dynamic global vegetation models and eight satellite-derived GPP products, mainly because of their differences in the magnitude of CFE in evergreen broadleaf forests. These results highlight the critical role that CFE has played in the global carbon cycle in recent decades.
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16
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Schuler P, Cormier M, Werner RA, Buchmann N, Gessler A, Vitali V, Saurer M, Lehmann MM. A high-temperature water vapor equilibration method to determine non-exchangeable hydrogen isotope ratios of sugar, starch and cellulose. PLANT, CELL & ENVIRONMENT 2022; 45:12-22. [PMID: 34564870 PMCID: PMC9291759 DOI: 10.1111/pce.14193] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Revised: 09/16/2021] [Accepted: 09/21/2021] [Indexed: 06/13/2023]
Abstract
The analysis of the non-exchangeable hydrogen isotope ratio (δ2 Hne ) in carbohydrates is mostly limited to the structural component cellulose, while simple high-throughput methods for δ2 Hne values of non-structural carbohydrates (NSC) such as sugar and starch do not yet exist. Here, we tested if the hot vapor equilibration method originally developed for cellulose is applicable for NSC, verified by comparison with the traditional nitration method. We set up a detailed analytical protocol and applied the method to plant extracts of leaves from species with different photosynthetic pathways (i.e., C3 , C4 and CAM). δ2 Hne of commercial sugars and starch from different classes and sources, ranging from -157.8 to +6.4‰, were reproducibly analysed with precision between 0.2‰ and 7.7‰. Mean δ2 Hne values of sugar are lowest in C3 (-92.0‰), intermediate in C4 (-32.5‰) and highest in CAM plants (6.0‰), with NSC being 2 H-depleted compared to cellulose and sugar being generally more 2 H-enriched than starch. Our results suggest that our method can be used in future studies to disentangle 2 H-fractionation processes, for improving mechanistic δ2 Hne models for leaf and tree-ring cellulose and for further development of δ2 Hne in plant carbohydrates as a potential proxy for climate, hydrology, plant metabolism and physiology.
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Affiliation(s)
- Philipp Schuler
- Research Unit of Forest Dynamics, Research Group of Ecosystem EcologySwiss Federal Institute for Forest, Snow and Landscape Research WSLBirmensdorfSwitzerland
| | - Marc‐André Cormier
- Department of Earth Sciences, Research Group of Ocean BiogeochemistryUniversity of OxfordOxfordUK
| | - Roland A. Werner
- Department of Environmental Systems Science, Group of Grassland SciencesETH ZurichZürichSwitzerland
| | - Nina Buchmann
- Department of Environmental Systems Science, Group of Grassland SciencesETH ZurichZürichSwitzerland
| | - Arthur Gessler
- Research Unit of Forest Dynamics, Research Group of Ecosystem EcologySwiss Federal Institute for Forest, Snow and Landscape Research WSLBirmensdorfSwitzerland
- Department of Environmental Systems Science, Institute of Terrestrial EcosystemsETH ZurichZürichSwitzerland
| | - Valentina Vitali
- Research Unit of Forest Dynamics, Research Group of Ecosystem EcologySwiss Federal Institute for Forest, Snow and Landscape Research WSLBirmensdorfSwitzerland
| | - Matthias Saurer
- Research Unit of Forest Dynamics, Research Group of Ecosystem EcologySwiss Federal Institute for Forest, Snow and Landscape Research WSLBirmensdorfSwitzerland
| | - Marco M. Lehmann
- Research Unit of Forest Dynamics, Research Group of Ecosystem EcologySwiss Federal Institute for Forest, Snow and Landscape Research WSLBirmensdorfSwitzerland
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17
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Serk H, Nilsson MB, Bohlin E, Ehlers I, Wieloch T, Olid C, Grover S, Kalbitz K, Limpens J, Moore T, Münchberger W, Talbot J, Wang X, Knorr KH, Pancotto V, Schleucher J. Global CO 2 fertilization of Sphagnum peat mosses via suppression of photorespiration during the twentieth century. Sci Rep 2021; 11:24517. [PMID: 34972838 PMCID: PMC8720097 DOI: 10.1038/s41598-021-02953-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Accepted: 11/12/2021] [Indexed: 11/13/2022] Open
Abstract
Natural peatlands contribute significantly to global carbon sequestration and storage of biomass, most of which derives from Sphagnum peat mosses. Atmospheric CO2 levels have increased dramatically during the twentieth century, from 280 to > 400 ppm, which has affected plant carbon dynamics. Net carbon assimilation is strongly reduced by photorespiration, a process that depends on the CO2 to O2 ratio. Here we investigate the response of the photorespiration to photosynthesis ratio in Sphagnum mosses to recent CO2 increases by comparing deuterium isotopomers of historical and contemporary Sphagnum tissues collected from 36 peat cores from five continents. Rising CO2 levels generally suppressed photorespiration relative to photosynthesis but the magnitude of suppression depended on the current water table depth. By estimating the changes in water table depth, temperature, and precipitation during the twentieth century, we excluded potential effects of these climate parameters on the observed isotopomer responses. Further, we showed that the photorespiration to photosynthesis ratio varied between Sphagnum subgenera, indicating differences in their photosynthetic capacity. The global suppression of photorespiration in Sphagnum suggests an increased net primary production potential in response to the ongoing rise in atmospheric CO2, in particular for mire structures with intermediate water table depths.
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Affiliation(s)
- Henrik Serk
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden.,Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Mats B Nilsson
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden.
| | - Elisabet Bohlin
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Ina Ehlers
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden
| | - Thomas Wieloch
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden
| | - Carolina Olid
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden.,Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
| | - Samantha Grover
- Department of Applied Chemistry and Environmental Science, RMIT University, Melbourne, Australia
| | - Karsten Kalbitz
- Institute of Soil Science and Site Ecology, Dresden University of Technology, Tharandt, Germany
| | - Juul Limpens
- Department of Environmental Sciences, Wageningen University, Wageningen, The Netherlands
| | - Tim Moore
- Department of Geography, McGill University, Montreal, Canada
| | | | - Julie Talbot
- Department of Geography, Université de Montréal, Montreal, Canada
| | - Xianwei Wang
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, People's Republic of China
| | | | - Verónica Pancotto
- Centro Austral de Investigaciones Científicas (CADIC-CONICET), Ushuaia, Argentina
| | - Jürgen Schleucher
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå, Sweden.
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18
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Keenan TF, Luo X, De Kauwe MG, Medlyn BE, Prentice IC, Stocker BD, Smith NG, Terrer C, Wang H, Zhang Y, Zhou S. A constraint on historic growth in global photosynthesis due to increasing CO 2. Nature 2021; 600:253-258. [PMID: 34880429 DOI: 10.1038/s41586-021-04096-9] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Accepted: 10/05/2021] [Indexed: 11/09/2022]
Abstract
The global terrestrial carbon sink is increasing1-3, offsetting roughly a third of anthropogenic CO2 released into the atmosphere each decade1, and thus serving to slow4 the growth of atmospheric CO2. It has been suggested that a CO2-induced long-term increase in global photosynthesis, a process known as CO2 fertilization, is responsible for a large proportion of the current terrestrial carbon sink4-7. The estimated magnitude of the historic increase in photosynthesis as result of increasing atmospheric CO2 concentrations, however, differs by an order of magnitude between long-term proxies and terrestrial biosphere models7-13. Here we quantify the historic effect of CO2 on global photosynthesis by identifying an emergent constraint14-16 that combines terrestrial biosphere models with global carbon budget estimates. Our analysis suggests that CO2 fertilization increased global annual photosynthesis by 11.85 ± 1.4%, or 13.98 ± 1.63 petagrams carbon (mean ± 95% confidence interval) between 1981 and 2020. Our results help resolve conflicting estimates of the historic sensitivity of global photosynthesis to CO2, and highlight the large impact anthropogenic emissions have had on ecosystems worldwide.
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Affiliation(s)
- T F Keenan
- Department of Environmental Science, Policy and Management, UC Berkeley, Berkeley, CA, USA. .,Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
| | - X Luo
- Department of Environmental Science, Policy and Management, UC Berkeley, Berkeley, CA, USA.,Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.,Department of Geography, National University of, Singapore, Singapore
| | - M G De Kauwe
- ARC Centre of Excellence for Climate Extremes, Sydney, New South Wales, Australia.,Climate Change Research Centre, University of New South Wales, Sydney, New South Wales, Australia.,School of Biological Sciences, University of Bristol, Bristol, UK
| | - B E Medlyn
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - I C Prentice
- Department of Life Sciences, Imperial College London, Ascot, UK.,Department of Biological Sciences, Macquarie University, North Ryde, New South Wales, Australia.,Department of Earth System Science, Tsinghua University, Haidian, Beijing, China
| | - B D Stocker
- Department of Environmental Systems Science, ETH, Zurich, Switzerland.,Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - N G Smith
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, USA
| | - C Terrer
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.,Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Boston, MA, USA
| | - H Wang
- Department of Earth System Science, Tsinghua University, Haidian, Beijing, China
| | - Y Zhang
- Department of Environmental Science, Policy and Management, UC Berkeley, Berkeley, CA, USA.,Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.,Sino-French Institute for Earth System Science, College of Urban and Environmental Sciences, Peking University, Beijing, China
| | - S Zhou
- Department of Environmental Science, Policy and Management, UC Berkeley, Berkeley, CA, USA.,Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.,Lamont-Doherty Earth Observatory of Columbia University, Palisades, NY, USA.,Earth Institute, Columbia University, New York, NY, USA.,Department of Earth and Environmental Engineering, Columbia University, New York, NY, USA.,State Key Laboratory of Earth Surface Processes and Resources Ecology, Faculty of Geographical Science, Beijing Normal University, Beijing, China
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19
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Zheng S, Ye C, Lu J, Liufu J, Lin L, Dong Z, Li J, Zhuang C. Improving the Rice Photosynthetic Efficiency and Yield by Editing OsHXK1 via CRISPR/Cas9 System. Int J Mol Sci 2021; 22:ijms22179554. [PMID: 34502462 PMCID: PMC8430575 DOI: 10.3390/ijms22179554] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Revised: 08/29/2021] [Accepted: 08/30/2021] [Indexed: 01/19/2023] Open
Abstract
Rice (Oryza sativa L.) is an important food crop species in China. Cultivating high-yielding rice varieties that have a high photosynthetic efficiency is an important goal of rice breeding in China. In recent years, due to the continual innovation of molecular breeding methods, many excellent genes have been applied in rice breeding, which is highly important for increasing rice yields. In this paper, the hexokinase gene OsHXK1 was knocked out via the CRISPR/Cas9 gene-editing method in the indica rice varieties Huanghuazhan, Meixiangzhan, and Wushansimiao, and OsHXK1-CRISPR/Cas9 lines were obtained. According to the results of a phenotypic analysis and agronomic trait statistics, the OsHXK1-CRISPR/Cas9 plants presented increased light saturation points, stomatal conductance, light tolerance, photosynthetic products, and rice yields. Moreover, transcriptome analysis showed that the expression of photosynthesis-related genes significantly increased. Taken together, our results revealed that knocking out OsHXK1 via the CRISPR/Cas9 gene-editing method could effectively lead to the cultivation of high-photosynthetic efficiency and high-yielding rice varieties. They also revealed the important roles of OsHXK1 in the regulation of rice yield and photosynthesis.
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Affiliation(s)
- Shaoyan Zheng
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Chanjuan Ye
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Jingqin Lu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Jiamin Liufu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Lin Lin
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Zequn Dong
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Jing Li
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
| | - Chuxiong Zhuang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China; (S.Z.); (C.Y.); (J.L.); (J.L.); (L.L.); (Z.D.); (J.L.)
- Guangdong Laboratory for Lingnan Modern Agriculture, South China Agricultural University, Guangzhou 510642, China
- Correspondence:
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20
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Ferguson JN, Tidy AC, Murchie EH, Wilson ZA. The potential of resilient carbon dynamics for stabilizing crop reproductive development and productivity during heat stress. PLANT, CELL & ENVIRONMENT 2021; 44:2066-2089. [PMID: 33538010 DOI: 10.1111/pce.14015] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 01/21/2021] [Accepted: 01/22/2021] [Indexed: 05/20/2023]
Abstract
Impaired carbon metabolism and reproductive development constrain crop productivity during heat stress. Reproductive development is energy intensive, and its requirement for respiratory substrates rises as associated metabolism increases with temperature. Understanding how these processes are integrated and the extent to which they contribute to the maintenance of yield during and following periods of elevated temperatures is important for developing climate-resilient crops. Recent studies are beginning to demonstrate links between processes underlying carbon dynamics and reproduction during heat stress, consequently a summation of research that has been reported thus far and an evaluation of purported associations are needed to guide and stimulate future research. To this end, we review recent studies relating to source-sink dynamics, non-foliar photosynthesis and net carbon gain as pivotal in understanding how to improve reproductive development and crop productivity during heat stress. Rapid and precise phenotyping during narrow phenological windows will be important for understanding mechanisms underlying these processes, thus we discuss the development of relevant high-throughput phenotyping approaches that will allow for more informed decision-making regarding future crop improvement.
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Affiliation(s)
- John N Ferguson
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
- Future Food Beacon of Excellence, School of Biosciences, University of Nottingham, Leicestershire, UK
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Alison C Tidy
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
| | - Erik H Murchie
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
| | - Zoe A Wilson
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
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21
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Walker AP, De Kauwe MG, Bastos A, Belmecheri S, Georgiou K, Keeling RF, McMahon SM, Medlyn BE, Moore DJP, Norby RJ, Zaehle S, Anderson-Teixeira KJ, Battipaglia G, Brienen RJW, Cabugao KG, Cailleret M, Campbell E, Canadell JG, Ciais P, Craig ME, Ellsworth DS, Farquhar GD, Fatichi S, Fisher JB, Frank DC, Graven H, Gu L, Haverd V, Heilman K, Heimann M, Hungate BA, Iversen CM, Joos F, Jiang M, Keenan TF, Knauer J, Körner C, Leshyk VO, Leuzinger S, Liu Y, MacBean N, Malhi Y, McVicar TR, Penuelas J, Pongratz J, Powell AS, Riutta T, Sabot MEB, Schleucher J, Sitch S, Smith WK, Sulman B, Taylor B, Terrer C, Torn MS, Treseder KK, Trugman AT, Trumbore SE, van Mantgem PJ, Voelker SL, Whelan ME, Zuidema PA. Integrating the evidence for a terrestrial carbon sink caused by increasing atmospheric CO 2. THE NEW PHYTOLOGIST 2021; 229:2413-2445. [PMID: 32789857 DOI: 10.1111/nph.16866] [Citation(s) in RCA: 124] [Impact Index Per Article: 41.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Accepted: 07/06/2020] [Indexed: 05/22/2023]
Abstract
Atmospheric carbon dioxide concentration ([CO2 ]) is increasing, which increases leaf-scale photosynthesis and intrinsic water-use efficiency. These direct responses have the potential to increase plant growth, vegetation biomass, and soil organic matter; transferring carbon from the atmosphere into terrestrial ecosystems (a carbon sink). A substantial global terrestrial carbon sink would slow the rate of [CO2 ] increase and thus climate change. However, ecosystem CO2 responses are complex or confounded by concurrent changes in multiple agents of global change and evidence for a [CO2 ]-driven terrestrial carbon sink can appear contradictory. Here we synthesize theory and broad, multidisciplinary evidence for the effects of increasing [CO2 ] (iCO2 ) on the global terrestrial carbon sink. Evidence suggests a substantial increase in global photosynthesis since pre-industrial times. Established theory, supported by experiments, indicates that iCO2 is likely responsible for about half of the increase. Global carbon budgeting, atmospheric data, and forest inventories indicate a historical carbon sink, and these apparent iCO2 responses are high in comparison to experiments and predictions from theory. Plant mortality and soil carbon iCO2 responses are highly uncertain. In conclusion, a range of evidence supports a positive terrestrial carbon sink in response to iCO2 , albeit with uncertain magnitude and strong suggestion of a role for additional agents of global change.
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Affiliation(s)
- Anthony P Walker
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Martin G De Kauwe
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, 2052, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, 2052, Australia
- Evolution and Ecology Research Centre, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Ana Bastos
- Ludwig Maximilians University of Munich, Luisenstr. 37, Munich, 80333, Germany
| | - Soumaya Belmecheri
- Laboratory of Tree Ring Research, University of Arizona, 1215 E Lowell St, Tucson, AZ, 85721, USA
| | - Katerina Georgiou
- Department of Earth System Science, Stanford University, Stanford, CA, 94305, USA
| | - Ralph F Keeling
- Scripps Institution of Oceanography, UC San Diego, La Jolla, CA, 92093, USA
| | - Sean M McMahon
- Smithsonian Environmental Research Center, Edgewater, MD, 21037, USA
| | - Belinda E Medlyn
- Hawkesbury Institute for the Environment, Western Sydney University, Locked Bag 1797, Penrith, NSW, 2751, Australia
| | - David J P Moore
- School of Natural Resources and the Environment, 1064 East Lowell Street, Tucson, AZ, 85721, USA
| | - Richard J Norby
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Sönke Zaehle
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, Jena, 07745, Germany
| | - Kristina J Anderson-Teixeira
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, MRC 5535, Front Royal, VA, 22630, USA
- Center for Tropical Forest Science-Forest Global Earth Observatory, Smithsonian Tropical Research Institute, Panama City, Panama
| | - Giovanna Battipaglia
- Department of Environmental, Biological and Pharmaceutical Sciences and Technologies, Università della Campania, Caserta, 81100, Italy
| | | | - Kristine G Cabugao
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Maxime Cailleret
- INRAE, UMR RECOVER, Aix-Marseille Université, 3275 route de Cézanne, Aix-en-Provence Cedex 5, 13182, France
- Swiss Federal Institute for Forest Snow and Landscape Research (WSL), Zürcherstrasse 111, 8903 Birmensdorf, Switzerland
| | - Elliott Campbell
- Department of Geography, University of California Santa Barbara, Santa Barbara, CA, 93106, USA
| | - Josep G Canadell
- CSIRO Oceans and Atmosphere, GPO Box 1700, Canberra, ACT, 2601, Australia
| | - Philippe Ciais
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, Gif-sur-Yvette, F-91191, France
| | - Matthew E Craig
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - David S Ellsworth
- Hawkesbury Institute for the Environment, Western Sydney University, Locked Bag 1797, Penrith, NSW, 2751, Australia
| | - Graham D Farquhar
- Plant Sciences, Research School of Biology, The Australian National University, Canberra, ACT, 2601, Australia
| | - Simone Fatichi
- Department of Civil and Environmental Engineering, National University of Singapore, 1 Engineering Drive 2, Singapore, 117576, Singapore
- Institute of Environmental Engineering, ETH Zurich, Stefano-Franscini Platz 5, Zurich, 8093, Switzerland
| | - Joshua B Fisher
- Jet Propulsion Laboratory, California Institute of Technology, 4800 Oak Grove Dr., Pasadena, CA, 91109, USA
| | - David C Frank
- Laboratory of Tree Ring Research, University of Arizona, 1215 E Lowell St, Tucson, AZ, 85721, USA
| | - Heather Graven
- Department of Physics, Imperial College London, South Kensington Campus, London, SW7 2AZ, UK
| | - Lianhong Gu
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Vanessa Haverd
- CSIRO Oceans and Atmosphere, GPO Box 1700, Canberra, ACT, 2601, Australia
| | - Kelly Heilman
- Laboratory of Tree Ring Research, University of Arizona, 1215 E Lowell St, Tucson, AZ, 85721, USA
| | - Martin Heimann
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, Jena, 07745, Germany
| | - Bruce A Hungate
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, 86011, USA
| | - Colleen M Iversen
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Fortunat Joos
- Climate and Environmental Physics, Physics Institute and Oeschger Centre for Climate Change Research, University of Bern, Sidlerstr. 5, Bern, CH-3012, Switzerland
| | - Mingkai Jiang
- Hawkesbury Institute for the Environment, Western Sydney University, Locked Bag 1797, Penrith, NSW, 2751, Australia
| | - Trevor F Keenan
- Department of Environmental Science, Policy and Management, UC Berkeley, Berkeley, CA, 94720, USA
- Earth and Environmental Sciences Area, Lawrence Berkeley National Lab., Berkeley, CA, 94720, USA
| | - Jürgen Knauer
- CSIRO Oceans and Atmosphere, GPO Box 1700, Canberra, ACT, 2601, Australia
| | - Christian Körner
- Department of Environmental Sciences, Botany, University of Basel, Basel, 4056, Switzerland
| | - Victor O Leshyk
- Center for Ecosystem Science and Society, Northern Arizona University, Flagstaff, AZ, 86011, USA
| | - Sebastian Leuzinger
- School of Science, Auckland University of Technology, Auckland, 1142, New Zealand
| | - Yao Liu
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Natasha MacBean
- Department of Geography, Indiana University, Bloomington, IN, 47405, USA
| | - Yadvinder Malhi
- School of Geography and the Environment, University of Oxford, Oxford, OX1 3QY, UK
| | - Tim R McVicar
- CSIRO Land and Water, GPO Box 1700, Canberra, ACT, 2601, Australia
- Australian Research Council Centre of Excellence for Climate Extremes, 142 Mills Rd, Australian National University, Canberra, ACT, 2601, Australia
| | - Josep Penuelas
- CSIC, Global Ecology CREAF-CSIC-UAB, Bellaterra, Barcelona, Catalonia, 08193, Spain
- CREAF, Cerdanyola del Vallès, Barcelona, Catalonia, 08193, Spain
| | - Julia Pongratz
- Ludwig Maximilians University of Munich, Luisenstr. 37, Munich, 80333, Germany
- Max Planck Institute for Meteorology, Bundesstr. 53, 20146 Hamburg, Germany
| | - A Shafer Powell
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Terhi Riutta
- School of Geography and the Environment, University of Oxford, Oxford, OX1 3QY, UK
| | - Manon E B Sabot
- ARC Centre of Excellence for Climate Extremes, University of New South Wales, Sydney, NSW, 2052, Australia
- Climate Change Research Centre, University of New South Wales, Sydney, NSW, 2052, Australia
- Evolution and Ecology Research Centre, University of New South Wales, Sydney, NSW, 2052, Australia
| | - Juergen Schleucher
- Department of Medical Biochemistry & Biophysics, Umeå University, Umea, 901 87, Sweden
| | - Stephen Sitch
- College of Life and Environmental Sciences, University of Exeter, Exeter, Laver Building, EX4 4QF, UK
| | - William K Smith
- School of Natural Resources and the Environment, 1064 East Lowell Street, Tucson, AZ, 85721, USA
| | - Benjamin Sulman
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA
| | - Benton Taylor
- Smithsonian Environmental Research Center, Edgewater, MD, 21037, USA
| | - César Terrer
- Physical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, 94550, USA
| | - Margaret S Torn
- Earth and Environmental Sciences Area, Lawrence Berkeley National Lab., Berkeley, CA, 94720, USA
| | - Kathleen K Treseder
- Department of Ecology and Evolutionary Biology, University of California Irvine, Irvine, CA, 92697, USA
| | - Anna T Trugman
- Department of Geography, 1832 Ellison Hall, Santa Barbara, CA, 93016, USA
| | - Susan E Trumbore
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Str. 10, Jena, 07745, Germany
| | | | - Steve L Voelker
- Department of Environmental and Forest Biology, State University of New York College of Environmental Science and Forestry, Syracuse, NY, 13210, USA
| | - Mary E Whelan
- Department of Environmental Sciences, Rutgers University, 14 College Farm Road, New Brunswick, NJ, 08901, USA
| | - Pieter A Zuidema
- Forest Ecology and Forest Management group, Wageningen University, PO Box 47, Wageningen, 6700 AA, the Netherlands
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Modeling suggests fossil fuel emissions have been driving increased land carbon uptake since the turn of the 20th Century. Sci Rep 2020; 10:9059. [PMID: 32493996 PMCID: PMC7271159 DOI: 10.1038/s41598-020-66103-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Accepted: 05/11/2020] [Indexed: 11/27/2022] Open
Abstract
Terrestrial vegetation removes CO2 from the atmosphere; an important climate regulation service that slows global warming. This 119 Pg C per annum transfer of CO2 into plants—gross primary productivity (GPP)—is the largest land carbon flux globally. While understanding past and anticipated future GPP changes is necessary to support carbon management, the factors driving long-term changes in GPP are largely unknown. Here we show that 1901 to 2010 changes in GPP have been dominated by anthropogenic activity. Our dual constraint attribution approach provides three insights into the spatiotemporal patterns of GPP change. First, anthropogenic controls on GPP change have increased from 57% (1901 decade) to 94% (2001 decade) of the vegetated land surface. Second, CO2 fertilization and nitro gen deposition are the most important drivers of change, 19.8 and 11.1 Pg C per annum (2001 decade) respectively, especially in the tropics and industrialized areas since the 1970’s. Third, changes in climate have functioned as fertilization to enhance GPP (1.4 Pg C per annum in the 2001 decade). These findings suggest that, from a land carbon balance perspective, the Anthropocene began over 100 years ago and that global change drivers have allowed GPP uptake to keep pace with anthropogenic emissions.
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23
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Ma R, Zhao Y, Liu L, Zhu Z, Wang B, Wang Y, Yin X, Su J, Zhou Y. Novel Position-Specific 18O/ 16O Measurement of Carbohydrates. II. The Complete Intramolecular 18O/ 16O Profile of the Glucose Unit in a Starch of C4 Origin. Anal Chem 2020; 92:7462-7470. [PMID: 32365292 DOI: 10.1021/acs.analchem.9b05314] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Information about plant photosynthetic carbon assimilation, physiology, and biochemistry is locked in the 18O/16O ratios of the individual positions of higher plants carbohydrates but is under-utilized, because of the difficulty of making these determinations. We report the extension of the wet chemistry approach we used to access the 18O/16O ratio of O-3 of glucose with a novel GC/Pyrolysis/IRMS-based method, to determine the 18O/16O ratios of O-4, O-5, and O-6. The O atoms (OH groups) at positions 1, 2, 5, and 6 of glucose were protected by acetonation (converting to 1,2;5,6-di-O-isopropylidene-glucofuranose, DAGF). The DAGF was then converted to 6-bromo-6-deoxy-1,2;3,5-di-O-isopropylidene-glucofuranose (6-bromoDAGF) with the simultaneous removal of O-6 with N-bromosuccinimide and triphenylphosphine. The DAGF was also methylated at O-3 with CH3I under the catalysis of NaH to 3-methylDAGF, which was then deacetonated to 1,2-O-isopropylidene-3-O-methyl-glucofuranose (3-methylMAGF). O-5 and O-6 were then removed as a whole from 3-methylMAGF by I2 oxidization under the catalysis of Ph3P and imidazole. Isotope mass balance was then applied to calculate the 18O/16O of O-5 and O-6 as a whole and O-6, respectively. Sampling at different stages of substrate conversion to product and applying a Rayleigh-type fractionation model were employed, when quantitative conversion of substrate was unachievable to calculate the δ18O of the converted substrate. Quantitative conversion of glucose with phenylhydrazine to phenylglucosazone also allowed for the calculation of δ18O2 by applying isotope mass balance between the two. A C4 starch-derived glucose intramolecular δ18O profile is now determined: O-3 is relatively enriched (by 12.16 mUr), O-4 is relatively depleted (by 20.40-31.11 mUr), and O-2 is marginally enriched (by 2.40 mUr) against the molecular average.
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Affiliation(s)
- Ran Ma
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021
| | - Yu Zhao
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021
| | - Lan Liu
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021.,Southern Marine Science and Engineering Guangdong Laboratory, Zhuhai, China, 519082
| | - Zhenyu Zhu
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021
| | - Bo Wang
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021
| | - Ying Wang
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021
| | - Xijie Yin
- MNR Third Institute of Oceanology, Xiamen, China, 361005
| | - Jing Su
- MNR Third Institute of Oceanology, Xiamen, China, 361005
| | - Youping Zhou
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China, 710021.,Southern Marine Science and Engineering Guangdong Laboratory, Zhuhai, China, 519082
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24
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Fernie AR, Bauwe H. Wasteful, essential, evolutionary stepping stone? The multiple personalities of the photorespiratory pathway. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 102:666-677. [PMID: 31904886 DOI: 10.1111/tpj.14669] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Revised: 11/30/2019] [Accepted: 12/11/2019] [Indexed: 05/08/2023]
Abstract
The photorespiratory pathway, in short photorespiration, is a metabolic repair system that enables the CO2 fixation enzyme Rubisco to sustainably operate in the presence of oxygen, that is, during oxygenic photosynthesis of plants and cyanobacteria. Photorespiration is necessary because an auto-inhibitory metabolite, 2-phosphoglycolate (2PG), is produced when Rubisco binds oxygen instead of CO2 as a substrate and must be removed, to avoid collapse of metabolism, and recycled as efficiently as possible. The basic principle of recycling 2PG very likely evolved several billion years ago in connection with the evolution of oxyphotobacteria. It comprises the multi-step combination of two molecules of 2PG to form 3-phosphoglycerate. The biochemistry of this process dictates that one out of four 2PG carbons is lost as CO2 , which is a long-standing plant breeders' concern because it represents by far the largest fraction of respiratory processes that reduce gross-photosynthesis of major crops down to about 50% and less, lowering potential yields. In addition to the ATP needed for recycling of the 2PG carbon, extra energy is needed for the refixation of liberated equal amounts of ammonia. It is thought that the energy costs of photorespiration have an additional negative impact on crop yields in at least some environments. This paper discusses recent advances concerning the origin and evolution of photorespiration, and gives an overview of contemporary and envisioned strategies to engineer the biochemistry of, or even avoid, photorespiration.
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Affiliation(s)
- Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Hermann Bauwe
- Plant Physiology Department, University of Rostock, Albert-Einstein-Straße 3, D-18051, Rostock, Germany
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25
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Vanlerberghe GC, Dahal K, Alber NA, Chadee A. Photosynthesis, respiration and growth: A carbon and energy balancing act for alternative oxidase. Mitochondrion 2020; 52:197-211. [PMID: 32278748 DOI: 10.1016/j.mito.2020.04.001] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Revised: 02/28/2020] [Accepted: 04/06/2020] [Indexed: 12/26/2022]
Abstract
This review summarizes knowledge of alternative oxidase, a mitochondrial electron transport chain component that lowers the ATP yield of plant respiration. Analysis of mutant and transgenic plants has established that alternative oxidase activity supports leaf photosynthesis. The interaction of alternative oxidase respiration with chloroplast metabolism is important under conditions that challenge energy and/or carbon balance in the photosynthetic cell. Under such conditions, alternative oxidase provides an extra-chloroplastic means to optimize the status of chloroplast energy pools (ATP, NADPH) and to manage cellular carbohydrate pools in response to changing rates of carbon fixation and carbon demand for growth and maintenance. Transcriptional and post-translational mechanisms ensure that alternative oxidase can respond effectively when carbon and energy balance are being challenged. This function appears particularly significant under abiotic stress conditions such as water deficit, high salinity, or temperature extremes. Under such conditions, alternative oxidase respiration positively affects growth and stress tolerance, despite it lowering the energy yield and carbon use efficiency of respiration. In part, this beneficial effect relates to the ability of alternative oxidase respiration to prevent excessive reactive oxygen species generation in both mitochondria and chloroplasts. Recent evidence suggests that alternative oxidase respiration is an interesting target for crop improvement.
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Affiliation(s)
- Greg C Vanlerberghe
- Department of Biological Sciences, and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON M1C1A4, Canada.
| | - Keshav Dahal
- Fredericton Research and Development Centre, Agriculture and Agri-Food Canada, 850 Lincoln Road, P.O. Box 20280, Fredericton, New Brunswick E3B4Z7, Canada
| | - Nicole A Alber
- Department of Biological Sciences, and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON M1C1A4, Canada
| | - Avesh Chadee
- Department of Biological Sciences, and Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON M1C1A4, Canada
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26
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Martinez Henao J, Demers LE, Grosser K, Schedl A, van Dam NM, Bede JC. Fertilizer Rate-Associated Increase in Foliar Jasmonate Burst Observed in Wounded Arabidopsis thaliana Leaves is Attenuated at eCO 2. FRONTIERS IN PLANT SCIENCE 2020; 10:1636. [PMID: 32010155 PMCID: PMC6977439 DOI: 10.3389/fpls.2019.01636] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Accepted: 11/20/2019] [Indexed: 05/31/2023]
Abstract
The predicted future increase in tropospheric carbon dioxide (CO2) levels will have major effects on C3 plants and their interactions with other organisms in the biosphere. In response to attack by chewing arthropod herbivores or nectrotrophic pathogens, many plants mount a rapid and intense increase in jasmonate-related phytohormones that results in a robust defense response; however, previous studies have shown that C3 plants grown at elevated CO2 may have lower induced jasmonate levels, particularly in well nitrate-fertilized plants. Given the relationship between atmospheric CO2, photorespiration, cellular reductant and redox status, nitrogen assimilation and phytohormones, we compared wound-induced responses of the C3 plant Arabidopsis thaliana. These plants were fertilized at two different rates (1 or 10 mM) with nitrate or ammonium and grown at ambient or elevated CO2. In response to artificial wounding, an increase in cellular oxidative status leads to a strong increase in jasmonate phytohormones. At ambient CO2, increased oxidative state of nitrate-fertilized plants leads to a robust 7-iso-jasmonyl-L-isoleucine increase; however, the strong fertilizer rate-associated increase is alleviated in plants grown at elevated CO2. As well, the changes in ascorbate in response to wounding and wound-induced salicylic acid levels may also contribute to the suppression of the jasmonate burst. Understanding the mechanism underlying the attenuation of the jasmonate burst at elevated CO2 has important implications for fertilization strategies under future predicted climatic conditions.
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Affiliation(s)
| | - Louis Erik Demers
- Department of Plant Science, McGill University, Ste-Anne-de-Bellevue, QC, Canada
| | - Katharina Grosser
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Friedrich-Schiller-University Jena, Leipzig, Germany
| | - Andreas Schedl
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Friedrich-Schiller-University Jena, Leipzig, Germany
| | - Nicole M. van Dam
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Friedrich-Schiller-University Jena, Leipzig, Germany
| | - Jacqueline C. Bede
- Department of Plant Science, McGill University, Ste-Anne-de-Bellevue, QC, Canada
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27
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Feng BH, Li GY, Islam M, Fu WM, Zhou YQ, Chen TT, Tao LX, Fu GF. Strengthened antioxidant capacity improves photosynthesis by regulating stomatal aperture and ribulose-1,5-bisphosphate carboxylase/oxygenase activity. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 290:110245. [PMID: 31779890 DOI: 10.1016/j.plantsci.2019.110245] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2019] [Revised: 08/09/2019] [Accepted: 08/28/2019] [Indexed: 05/10/2023]
Abstract
ABA is important for plant growth and development; however, it also inhibits photosynthesis by regulating the stomatal aperture and ribulose-1,5-bisphosphate carboxylase/oxygenase activity. Noteworthy, this negative effect can be alleviated by antioxidants including ascorbic acid (AsA) and catalase (CAT), but the underlying mechanism remains unclear. Two rice cultivars, Zhefu802 (recurrent parent) and its near-isogenic line, fgl were selected and planted in a greenhouse with 30/24 °C (day/night) under natural sunlight conditions. Compared to fgl, Zhefu802 had significantly lower net photosynthetic rate (PN) and stomatal conductance (Cond) as well as significantly higher ABA and H2O2 contents. However, AsA and CAT increased PN, Cond, and stomatal aperture, which decreased H2O2 and malondialdehyde (MDA) levels. In this process, AsA and CAT significantly increased the ribulose-1,5-bisphosphate carboxylase activity, while they strongly decreased the ribulose-1,5-bisphosphate oxygenase activity, and finally caused an obvious decrease in the ratio of photorespiration (Pr) to PN. Additionally, AsA and CAT significantly increased the expression levels of RbcS and RbcL genes of leaves, while H2O2 significantly decreased them, especially the RbcS gene. In summary, the removal of H2O2 by AsA and CAT can improve the leaf photosynthesis by alleviating the inhibition on the stomatal conductance and ribulose-1,5-bisphosphate carboxylase capacity caused by ABA.
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Affiliation(s)
- B H Feng
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - G Y Li
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - Md Islam
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China; Department of Agricultural Extension, Ministry of Agriculture, Dhaka 1215, Bangladesh
| | - W M Fu
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - Y Q Zhou
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - T T Chen
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - L X Tao
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China; Department of Agricultural Extension, Ministry of Agriculture, Dhaka 1215, Bangladesh.
| | - G F Fu
- National Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China; Department of Agricultural Extension, Ministry of Agriculture, Dhaka 1215, Bangladesh.
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Papazian S, Blande JD. Dynamics of plant responses to combinations of air pollutants. PLANT BIOLOGY (STUTTGART, GERMANY) 2020; 22 Suppl 1:68-83. [PMID: 30584692 DOI: 10.1111/plb.12953] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2018] [Accepted: 12/20/2018] [Indexed: 06/09/2023]
Abstract
The focus of this review is on how plants respond to combinations of multiple air pollutants. Global pollution trends, plant physiological responses and ecological perspectives in natural and agricultural systems are all discussed. In particular, we highlight the importance of studying sequential or simultaneous exposure of plants to pollutants, rather than exposure to individual pollutants in isolation, and explore how these responses may interfere with the way plants interact with their biotic community. Air pollutants can alter the normal physiology and metabolic functioning of plants. Here we describe how the phenotypic and molecular changes in response to multiple pollutants can differ compared to those elicited by single pollutants, and how different responses have been observed between plants in the field and in controlled laboratory conditions and between trees and crop plants. From an ecological perspective, we discuss how air pollution can result in greater susceptibility to biotic stressors and in direct or indirect effects on interactions with organisms that occupy higher trophic levels. Finally, we provide an overview of the potential uses of plants to mitigate air pollution, exploring the feasibility for pollution removal via the processes of bio-accumulation and phytoremediation. We conclude by proposing some new directions for future research in the field.
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Affiliation(s)
- S Papazian
- Department of Plant Physiology, Umeå University, Umeå Plant Science Centre, Umeå, Sweden
| | - J D Blande
- Department of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, Finland
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29
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Singer SD, Soolanayakanahally RY, Foroud NA, Kroebel R. Biotechnological strategies for improved photosynthesis in a future of elevated atmospheric CO 2. PLANTA 2019; 251:24. [PMID: 31784816 DOI: 10.1007/s00425-019-03301-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Accepted: 10/11/2019] [Indexed: 06/10/2023]
Abstract
The improvement of photosynthesis using biotechnological approaches has been the focus of much research. It is now vital that these strategies be assessed under future atmospheric conditions. The demand for crop products is expanding at an alarming rate due to population growth, enhanced affluence, increased per capita calorie consumption, and an escalating need for plant-based bioproducts. While solving this issue will undoubtedly involve a multifaceted approach, improving crop productivity will almost certainly provide one piece of the puzzle. The improvement of photosynthetic efficiency has been a long-standing goal of plant biotechnologists as possibly one of the last remaining means of achieving higher yielding crops. However, the vast majority of these studies have not taken into consideration possible outcomes when these plants are grown long-term under the elevated CO2 concentrations (e[CO2]) that will be evident in the not too distant future. Due to the considerable effect that CO2 levels have on the photosynthetic process, these assessments should become commonplace as a means of ensuring that research in this field focuses on the most effective approaches for our future climate scenarios. In this review, we discuss the main biotechnological research strategies that are currently underway with the aim of improving photosynthetic efficiency and biomass production/yields in the context of a future of e[CO2], as well as alternative approaches that may provide further photosynthetic benefits under these conditions.
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Affiliation(s)
- Stacy D Singer
- Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, AB, T1J 4B1, Canada.
| | - Raju Y Soolanayakanahally
- Saskatoon Research and Development Centre, Agriculture and Agri-Food Canada, Saskatoon, SK, S7N 0X2, Canada
| | - Nora A Foroud
- Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, AB, T1J 4B1, Canada
| | - Roland Kroebel
- Lethbridge Research and Development Centre, Agriculture and Agri-Food Canada, Lethbridge, AB, T1J 4B1, Canada
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Fahad S, Khan FA, Pandupuspitasari N, Hussain S, Khan IA, Saeed M, Saud S, Hassan S, Adnan M, Arif M, Alam M, Ullah H, Hakeem KR, Alharby H, Riaz M, Sameeullah M, Hammad HM, Nasim W, Ahmad S, Afzal M, Alghamdi SS, Bamagoos AA, Abd Allah EF, Huang J. Suppressing photorespiration for the improvement in photosynthesis and crop yields: A review on the role of S-allantoin as a nitrogen source. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2019; 237:644-651. [PMID: 30870683 DOI: 10.1016/j.jenvman.2019.02.082] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2018] [Revised: 02/12/2019] [Accepted: 02/17/2019] [Indexed: 06/09/2023]
Abstract
Environmental variations resulting in biotic and abiotic stresses demand adaptive changes in the photosynthetic machinery. To cope with these challenges, plant scientists are constantly striving to enhance photosynthetic activity. The photorespiration pathway, which fixes O2 and releases CO2 in C3 plants, competes with photosynthesis. One method to increase yield would be to enhance photosynthesis by engineering the photorespiratory pathway. To date, three engineered photorespiratory pathways have been produced, of which two have been proven experimentally in the model plant, Arabidopsis thaliana. These approaches might be helpful in enhancing crop resilience to future environmental challenges. In partially photorespiratory suppressed plants, it is hypothesized that a gene cluster may have formed between bacterial glycolate dehydrogenase (GDH), glyoxylate carboligase (GCL), and tartronic semi aldehyde (TSR) genes with Arabidopsis allantoin degradation genes like Arabidopsis allantoinase (AtALN) to utilize S-allantoin as a source of nitrogen. Observations of the use of allantoin as an exclusive source of nitrogen or energy by Arabidopsis and Escherichia coli led us to propose a genetic switch control model between nitrogen assimilation and energy producing pathways in partially photorespiratory suppressed plants.
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Affiliation(s)
- Shah Fahad
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, 430070, China; Department of Agriculture, The University of Swabi, Pakistan.
| | - Faheem Ahmed Khan
- Molecular Biotechnology Laboratory for Triticeae Crops, Huazhong Agricultural University, Wuhan, China; Key Laboratory of Agricultural Animal Genetics, Breeding and Reproduction, Huazhong Agricultural University, Wuhan, 430070, China
| | | | - Saddam Hussain
- Department of Agronomy, University of Agriculture, Faisalabad, Pakistan
| | - Imtiaz Ali Khan
- Department of Agriculture, The University of Swabi, Pakistan
| | - Muhammad Saeed
- Department of Agriculture, The University of Swabi, Pakistan
| | - Shah Saud
- Department of Horticultural, Northeast Agricultural University, Harbin, 150030, China
| | - Shah Hassan
- Agriculture Extension Department, The University of Agriculture, Peshawar, 25000, Pakistan
| | - Muhammad Adnan
- Department of Agriculture, The University of Swabi, Pakistan
| | - Muhammad Arif
- Department of Agronomy, Faculty of Crop Production Sciences, The University of Agriculture, Peshawar, 25000, Pakistan
| | - Mukhtar Alam
- Department of Agriculture, The University of Swabi, Pakistan
| | - Hidayat Ullah
- Department of Agriculture, The University of Swabi, Pakistan
| | - Khalid Rehman Hakeem
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, 21589, Jeddah, Saudi Arabia
| | - Hesham Alharby
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, 21589, Jeddah, Saudi Arabia
| | - Muhammad Riaz
- Department of Environmental Sciences and Engineering, Government College University Faisalabad, Allama Iqbal Road, Faisalabad, Pakistan
| | - Muhammad Sameeullah
- Department of Horticulture, Faculty of Agricultural and Natural Sciences, Abant Izzet Baysal University, Bolu, Turkey
| | - Hafiz Mohkum Hammad
- Department of Environmental Sciences, COMSATS University Islamabad, 61100, Vehari Campus, Pakistan
| | - Wajid Nasim
- Department of Environmental Sciences, COMSATS University Islamabad, 61100, Vehari Campus, Pakistan
| | - Shakeel Ahmad
- Bahauddin Zakariya University Multan, 60800, Pakistan
| | - Muhammad Afzal
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Salem Safer Alghamdi
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Atif A Bamagoos
- Department of Biological Sciences, Faculty of Science, King Abdulaziz University, 21589, Jeddah, Saudi Arabia
| | - Elsayed Fathi Abd Allah
- Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, Al-Khoud-123, Oman
| | - Jianliang Huang
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, 430070, China; Hubei Collaborative Innovation Center for Grain Industry, Yangtze University, Hubei, China.
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Lehmann MM, Ghiasi S, George GM, Cormier MA, Gessler A, Saurer M, Werner RA. Influence of starch deficiency on photosynthetic and post-photosynthetic carbon isotope fractionations. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:1829-1841. [PMID: 30785201 PMCID: PMC6436151 DOI: 10.1093/jxb/erz045] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Accepted: 01/21/2019] [Indexed: 05/27/2023]
Abstract
Carbon isotope (13C) fractionations occurring during and after photosynthetic CO2 fixation shape the carbon isotope composition (δ13C) of plant material and respired CO2. However, responses of 13C fractionations to diel variation in starch metabolism in the leaf are not fully understood. Here we measured δ13C of organic matter (δ13COM), concentrations and δ13C of potential respiratory substrates, δ13C of dark-respired CO2 (δ13CR), and gas exchange in leaves of starch-deficient plastidial phosphoglucomutase (pgm) mutants and wild-type plants of four species (Arabidopsis thaliana, Mesembryanthemum crystallinum, Nicotiana sylvestris, and Pisum sativum). The strongest δ13C response to the pgm-induced starch deficiency was observed in N. sylvestris, with more negative δ13COM, δ13CR, and δ13C values for assimilates (i.e. sugars and starch) and organic acids (i.e. malate and citrate) in pgm mutants than in wild-type plants during a diel cycle. The genotype differences in δ13C values could be largely explained by differences in leaf gas exchange. In contrast, the PGM-knockout effect on post-photosynthetic 13C fractionations via the plastidic fructose-1,6-bisphosphate aldolase reaction or during respiration was small. Taken together, our results show that the δ13C variations in starch-deficient mutants are primarily explained by photosynthetic 13C fractionations and that the combination of knockout mutants and isotope analyses allows additional insights into plant metabolism.
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Affiliation(s)
- Marco M Lehmann
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zuercherstrasse, Birmensdorf, Switzerland
| | - Shiva Ghiasi
- Institute of Agricultural Sciences, ETH Zurich, Universitaetstrasse, Zurich, Switzerland
| | - Gavin M George
- Institute of Molecular Plant Biology, ETH Zurich, Universitaetstrasse, Zurich, Switzerland
| | - Marc-André Cormier
- GFZ – German Research Centre for Geosciences, Geomorphology, Organic Surface Geochemistry Lab, Telegrafenberg, Wissenschaftspark Albert Einstein, Potsdam, Germany
- University of Oxford, Department of Earth Sciences, Ocean Biogeochemistry Group, South Parks Road, Oxford, UK
| | - Arthur Gessler
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zuercherstrasse, Birmensdorf, Switzerland
- Institute of Terrestrial Ecosystems, ETH Zurich, Universitaetstrasse, Zurich, Switzerland
| | - Matthias Saurer
- Forest Dynamics, Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zuercherstrasse, Birmensdorf, Switzerland
| | - Roland A Werner
- Institute of Agricultural Sciences, ETH Zurich, Universitaetstrasse, Zurich, Switzerland
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Decadal biomass increment in early secondary succession woody ecosystems is increased by CO 2 enrichment. Nat Commun 2019; 10:454. [PMID: 30765702 PMCID: PMC6376023 DOI: 10.1038/s41467-019-08348-1] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2017] [Accepted: 01/04/2019] [Indexed: 12/02/2022] Open
Abstract
Increasing atmospheric CO2 stimulates photosynthesis which can increase net primary production (NPP), but at longer timescales may not necessarily increase plant biomass. Here we analyse the four decade-long CO2-enrichment experiments in woody ecosystems that measured total NPP and biomass. CO2 enrichment increased biomass increment by 1.05 ± 0.26 kg C m−2 over a full decade, a 29.1 ± 11.7% stimulation of biomass gain in these early-secondary-succession temperate ecosystems. This response is predictable by combining the CO2 response of NPP (0.16 ± 0.03 kg C m−2 y−1) and the CO2-independent, linear slope between biomass increment and cumulative NPP (0.55 ± 0.17). An ensemble of terrestrial ecosystem models fail to predict both terms correctly. Allocation to wood was a driver of across-site, and across-model, response variability and together with CO2-independence of biomass retention highlights the value of understanding drivers of wood allocation under ambient conditions to correctly interpret and predict CO2 responses. It is unclear whether CO2-stimulation of photosynthesis can propagate through slower ecosystem processes and lead to long-term increases in terrestrial carbon. Here the authors show that CO2-stimulation of photosynthesis leads to a 30% increase in forest regrowth over a decade of CO2 enrichment.
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Shen BR, Wang LM, Lin XL, Yao Z, Xu HW, Zhu CH, Teng HY, Cui LL, Liu EE, Zhang JJ, He ZH, Peng XX. Engineering a New Chloroplastic Photorespiratory Bypass to Increase Photosynthetic Efficiency and Productivity in Rice. MOLECULAR PLANT 2019; 12:199-214. [PMID: 30639120 DOI: 10.1016/j.molp.2018.11.013] [Citation(s) in RCA: 103] [Impact Index Per Article: 20.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2018] [Revised: 10/29/2018] [Accepted: 11/29/2018] [Indexed: 05/18/2023]
Abstract
Over the past few years, three photorespiratory bypasses have been introduced into plants, two of which led to observable increases in photosynthesis and biomass yield. However, most of the experiments were carried out using Arabidopsis under controlled environmental conditions, and the increases were only observed under low-light and short-day conditions. In this study, we designed a new photorespiratory bypass (called GOC bypass), characterized by no reducing equivalents being produced during a complete oxidation of glycolate into CO2 catalyzed by three rice-self-originating enzymes, i.e., glycolate oxidase, oxalate oxidase, and catalase. We successfully established this bypass in rice chloroplasts using a multi-gene assembly and transformation system. Transgenic rice plants carrying GOC bypass (GOC plants) showed significant increases in photosynthesis efficiency, biomass yield, and nitrogen content, as well as several other CO2-enriched phenotypes under both greenhouse and field conditions. Grain yield of GOC plants varied depending on seeding season and was increased significantly in the spring. We further demonstrated that GOC plants had significant advantages under high-light conditions and that the improvements in GOC plants resulted primarily from a photosynthetic CO2-concentrating effect rather than from improved energy balance. Taken together, our results reveal that engineering a newly designed chloroplastic photorespiratory bypass could increase photosynthetic efficiency and yield of rice plants grown in field conditions, particularly under high light.
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Affiliation(s)
- Bo-Ran Shen
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Li-Min Wang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Xiu-Ling Lin
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Zhen Yao
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Hua-Wei Xu
- College of Agricultural, Henan University of Science and Technology, Luoyang, Henan, China
| | - Cheng-Hua Zhu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Hai-Yan Teng
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Li-Li Cui
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - E-E Liu
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Jian-Jun Zhang
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Zheng-Hui He
- Department of Biology, San Francisco State University, San Francisco, CA, USA
| | - Xin-Xiang Peng
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China.
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Cormier MA, Werner RA, Leuenberger MC, Kahmen A. 2H-enrichment of cellulose and n-alkanes in heterotrophic plants. Oecologia 2019; 189:365-373. [DOI: 10.1007/s00442-019-04338-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Accepted: 01/11/2019] [Indexed: 11/30/2022]
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35
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Dahal K, Vanlerberghe GC. Growth at Elevated CO 2 Requires Acclimation of the Respiratory Chain to Support Photosynthesis. PLANT PHYSIOLOGY 2018; 178:82-100. [PMID: 30042213 PMCID: PMC6130046 DOI: 10.1104/pp.18.00712] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2018] [Accepted: 07/10/2018] [Indexed: 05/18/2023]
Abstract
Plants will experience an elevated atmospheric concentration of CO2 (ECO2) in the future. Growth of tobacco (Nicotiana tabacum) at ECO2 more than doubled the leaf protein amount of alternative oxidase (AOX), a non-energy-conserving component of mitochondrial respiration. To test the functional significance of this AOX increase, wild-type tobacco was compared with AOX knockdown and overexpression lines, following growth at ambient CO2 or ECO2 The ECO2-grown AOX knockdowns had a reduced capacity for triose phosphate use (TPU) during photosynthesis compared with the other plant lines. This TPU limitation of CO2 assimilation was associated with an increased accumulation of glucose-6-phosphate, sucrose, and starch in the leaves of the knockdowns. Under TPU-limiting conditions, the size of the proton gradient and proton motive force across the thylakoid membrane was enhanced in the knockdowns relative to the other plant lines, suggesting a restriction of chloroplast ATP synthase activity. This restriction was not due to a decline in ATP synthase (AtpB) protein amount. The knockdowns also displayed a photosystem stoichiometry adjustment at ECO2, which was absent in the other plant lines. Additional experiments showed that the way in which AOX supports photosynthesis at ECO2 is distinct from its previously described role in supporting photosynthesis during water deficit. The results are discussed in terms of how AOX contributes to TPU capacity and the maintenance of chloroplast ATP synthase activity at ECO2 Overall, the evidence suggests that AOX respiration is needed to maintain both the carbon and energy balance in photosynthetic tissues during growth at ECO2.
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Affiliation(s)
- Keshav Dahal
- Departments of Biological Sciences and Cell and Systems Biology, University of Toronto Scarborough, Toronto, Ontario, Canada M1C1A4
| | - Greg C Vanlerberghe
- Departments of Biological Sciences and Cell and Systems Biology, University of Toronto Scarborough, Toronto, Ontario, Canada M1C1A4
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Ma R, Zhu Z, Wang B, Zhao Y, Yin X, Lu F, Wang Y, Su J, Hocart CH, Zhou Y. Novel Position-Specific 18O/16O Measurement of Carbohydrates. I. O-3 of Glucose and Confirmation of 18O/16O Heterogeneity at Natural Abundance Levels in Glucose from Starch in a C4 Plant. Anal Chem 2018; 90:10293-10301. [DOI: 10.1021/acs.analchem.8b02022] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Ran Ma
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi’an 710021, China
| | - Zhenyu Zhu
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi’an 710021, China
| | - Bo Wang
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi’an 710021, China
| | - Yu Zhao
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi’an 710021, China
| | - Xijie Yin
- SOA Third Institute of Oceanography, Xiamen 361005, China
| | - Fengyan Lu
- Institute of Earth Environment, Chinese Academy of Sciences, Xi’an 710061, China
| | - Ying Wang
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi’an 710021, China
| | - Jing Su
- SOA Third Institute of Oceanography, Xiamen 361005, China
| | - Charles H. Hocart
- Research School of Biology, Australian National University, Acton, Australian Capital Territory 2601, Australia
| | - Youping Zhou
- Isotopomics in Chemical Biology & Shaanxi Key Laboratory of Chemical Additives for Industry, School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi’an 710021, China
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37
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Zhang G, Zhang T, Liu J, Zhang J, He C. Comprehensive analysis of differentially expressed genes reveals the molecular response to elevated CO 2 levels in two sea buckthorn cultivars. Gene 2018; 660:120-127. [DOI: 10.1016/j.gene.2018.03.057] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2017] [Revised: 03/05/2018] [Accepted: 03/16/2018] [Indexed: 01/08/2023]
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Peichl M, Gažovič M, Vermeij I, de Goede E, Sonnentag O, Limpens J, Nilsson MB. Peatland vegetation composition and phenology drive the seasonal trajectory of maximum gross primary production. Sci Rep 2018; 8:8012. [PMID: 29789673 PMCID: PMC5964230 DOI: 10.1038/s41598-018-26147-4] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2018] [Accepted: 05/02/2018] [Indexed: 11/09/2022] Open
Abstract
Gross primary production (GPP) is a key driver of the peatland carbon cycle. Although many studies have explored the apparent GPP under natural light conditions, knowledge of the maximum GPP at light-saturation (GPPmax) and its spatio-temporal variation is limited. This information, however, is crucial since GPPmax essentially constrains the upper boundary for apparent GPP. Using chamber measurements combined with an external light source across experimental plots where vegetation composition was altered through long-term (20-year) nitrogen addition and artificial warming, we could quantify GPPmax in-situ and disentangle its biotic and abiotic controls in a boreal peatland. We found large spatial and temporal variations in the magnitudes of GPPmax which were related to vegetation species composition and phenology rather than abiotic factors. Specifically, we identified vegetation phenology as the main driver of the seasonal GPPmax trajectory. Abiotic anomalies (i.e. in air temperature and water table level), however, caused species-specific divergence between the trajectories of GPPmax and plant development. Our study demonstrates that photosynthetically active biomass constrains the potential peatland photosynthesis while abiotic factors act as secondary modifiers. This further calls for a better representation of species-specific vegetation phenology in process-based peatland models to improve predictions of global change impacts on the peatland carbon cycle.
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Affiliation(s)
- Matthias Peichl
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, 90183, Umeå, Sweden.
| | - Michal Gažovič
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, 90183, Umeå, Sweden
| | - Ilse Vermeij
- Plant Ecology and Nature Conservation Group, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Eefje de Goede
- Department of Aquatic Ecology, Radboud University Nijmegen, 6525 AJ, Nijmegen, The Netherlands.,Institute of Environmental Sciences, Leiden University, 2333CC, Leiden, The Netherlands
| | - Oliver Sonnentag
- Département de géographie, Université de Montréal, Montréal, QC H2V 2B8, Canada
| | - Juul Limpens
- Plant Ecology and Nature Conservation Group, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Mats B Nilsson
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, 90183, Umeå, Sweden
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Cormier MA, Werner RA, Sauer PE, Gröcke DR, Leuenberger MC, Wieloch T, Schleucher J, Kahmen A. 2 H-fractionations during the biosynthesis of carbohydrates and lipids imprint a metabolic signal on the δ 2 H values of plant organic compounds. THE NEW PHYTOLOGIST 2018; 218:479-491. [PMID: 29460486 DOI: 10.1111/nph.15016] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2017] [Accepted: 12/23/2017] [Indexed: 06/08/2023]
Abstract
Hydrogen (H) isotope ratio (δ2 H) analyses of plant organic compounds have been applied to assess ecohydrological processes in the environment despite a large part of the δ2 H variability observed in plant compounds not being fully elucidated. We present a conceptual biochemical model based on empirical H isotope data that we generated in two complementary experiments that clarifies a large part of the unexplained variability in the δ2 H values of plant organic compounds. The experiments demonstrate that information recorded in the δ2 H values of plant organic compounds goes beyond hydrological signals and can also contain important information on the carbon and energy metabolism of plants. Our model explains where 2 H-fractionations occur in the biosynthesis of plant organic compounds and how these 2 H-fractionations are tightly coupled to a plant's carbon and energy metabolism. Our model also provides a mechanistic basis to introduce H isotopes in plant organic compounds as a new metabolic proxy for the carbon and energy metabolism of plants and ecosystems. Such a new metabolic proxy has the potential to be applied in a broad range of disciplines, including plant and ecosystem physiology, biogeochemistry and palaeoecology.
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Affiliation(s)
- Marc-André Cormier
- Department of Environmental Systems Science, ETH Zürich, Universitätstrasse 2, 8092, Zürich, Switzerland
- Department of Environmental Sciences - Botany, University of Basel, Schönbeinstrasse 6, 4056, Basel, Switzerland
| | - Roland A Werner
- Department of Environmental Systems Science, ETH Zürich, Universitätstrasse 2, 8092, Zürich, Switzerland
| | - Peter E Sauer
- Department of Geological Sciences, Indiana University, Bloomington, IN, 47405-1405, USA
| | - Darren R Gröcke
- Stable Isotope Biogeochemistry Laboratory, Science Laboratories, Durham University, South Road, Durham, DH1 3LE, UK
| | - Markus C Leuenberger
- Climate and Environmental Physics, Physics Institute and Oeschger Centre for Climate Change Research, University of Bern, Sidlerstrasse 5, 3012, Bern, Switzerland
| | - Thomas Wieloch
- Department of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden
| | - Jürgen Schleucher
- Department of Medical Biochemistry and Biophysics, Umeå University, 901 87, Umeå, Sweden
| | - Ansgar Kahmen
- Department of Environmental Sciences - Botany, University of Basel, Schönbeinstrasse 6, 4056, Basel, Switzerland
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40
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Intramolecular 13C analysis of tree rings provides multiple plant ecophysiology signals covering decades. Sci Rep 2018; 8:5048. [PMID: 29567963 PMCID: PMC5864875 DOI: 10.1038/s41598-018-23422-2] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2017] [Accepted: 03/12/2018] [Indexed: 11/21/2022] Open
Abstract
Measurements of carbon isotope contents of plant organic matter provide important information in diverse fields such as plant breeding, ecophysiology, biogeochemistry and paleoclimatology. They are currently based on 13C/12C ratios of specific, whole metabolites, but we show here that intramolecular ratios provide higher resolution information. In the glucose units of tree-ring cellulose of 12 tree species, we detected large differences in 13C/12C ratios (>10‰) among carbon atoms, which provide isotopically distinct inputs to major global C pools, including wood and soil organic matter. Thus, considering position-specific differences can improve characterisation of soil-to-atmosphere carbon fluxes and soil metabolism. In a Pinus nigra tree-ring archive formed from 1961 to 1995, we found novel 13C signals, and show that intramolecular analysis enables more comprehensive and precise signal extraction from tree rings, and thus higher resolution reconstruction of plants’ responses to climate change. Moreover, we propose an ecophysiological mechanism for the introduction of a 13C signal, which links an environmental shift to the triggered metabolic shift and its intramolecular 13C signature. In conclusion, intramolecular 13C analyses can provide valuable new information about long-term metabolic dynamics for numerous applications.
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41
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Zhou Y, Zhang B, Stuart-Williams H, Grice K, Hocart CH, Gessler A, Kayler ZE, Farquhar GD. On the contributions of photorespiration and compartmentation to the contrasting intramolecular 2H profiles of C 3 and C 4 plant sugars. PHYTOCHEMISTRY 2018; 145:197-206. [PMID: 29175728 DOI: 10.1016/j.phytochem.2017.11.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2017] [Accepted: 11/03/2017] [Indexed: 06/07/2023]
Abstract
Compartmentation of C4 photosynthetic biochemistry into bundle sheath (BS) and mesophyll (M) cells, and photorespiration in C3 plants is predicted to have hydrogen isotopic consequences for metabolites at both molecular and site-specific levels. Molecular-level evidence was recently reported (Zhou et al., 2016), but evidence at the site-specific level is still lacking. We propose that such evidence exists in the contrasting 2H distribution profiles of glucose samples from naturally grown C3, C4 and CAM plants: photorespiration contributes to the relative 2H enrichment in H5 and relative 2H depletion in H1 & H6 (the average of the two pro-chiral Hs and in particular H6,pro-R) in C3 glucose, while 2H-enriched C3 mesophyll cellular (chloroplastic) water most likely contributes to the enrichment at H4; export of (transferable hydrogen atoms of) NADPH from C4 mesophyll cells to bundle sheath cells (via the malate shuttle) and incorporation of 2H-relatively unenriched BS cellular water contribute to the relative depletion of H4 & H5 respectively; shuttling of triose-phosphates (PGA: phosphoglycerate dand DHAP: dihydroacetone phosphate) between C4 bundle sheath and mesophyll cells contributes to the relative enrichment in H1 & H6 (in particular H6,pro-R) in C4 glucose.
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Affiliation(s)
- Youping Zhou
- School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China; Institute for Landscape Biogeochemistry, ZALF, Germany; Leibniz Institute for Freshwater Ecology & Inland Fisheries, Germany.
| | - Benli Zhang
- School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China
| | | | - Kliti Grice
- WA-Organic and Isotope Geochemistry Centre, Department of Chemistry, Curtin University, Australia
| | - Charles H Hocart
- School of Chemistry & Chemical Engineering, Shaanxi University of Science & Technology, Xi'an, China; Research School of Biology, Australian National University, Australia
| | - Arthur Gessler
- Institute for Landscape Biogeochemistry, ZALF, Germany; Swiss Federal Institute for Forest, Snow and Landscape Research, Birmensdorf, Switzerland
| | - Zachary E Kayler
- Institute for Landscape Biogeochemistry, ZALF, Germany; USDA Forest Service, Northern Research Station, Lawrence Livermore National Laboratory, Livermore, CA 94550, USA
| | - Graham D Farquhar
- Research School of Biology, Australian National University, Australia
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42
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Eiler JM, Clog M, Lawson M, Lloyd M, Piasecki A, Ponton C, Xie H. The isotopic structures of geological organic compounds. ACTA ACUST UNITED AC 2017. [DOI: 10.1144/sp468.4] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
AbstractOrganic compounds are ubiquitous in the Earth's surface, sediments and many rocks, and preserve records of geological, geochemical and biological history; they are also critical natural resources and major environmental pollutants. The naturally occurring stable isotopes of volatile elements (D, 13C, 15N, 17,18O, 33,34,36S) provide one way of studying the origin, evolution and migration of geological organic compounds. The study of bulk stable isotope compositions (i.e. averaged across all possible molecular isotopic forms) is well established and widely practised, but frequently results in non-unique interpretations. Increasingly, researchers are reading the organic isotopic record with greater depth and specificity by characterizing stable isotope ‘structures’ – the proportions of site-specific and multiply substituted isotopologues that contribute to the total rare-isotope inventory of each compound. Most of the technologies for measuring stable isotope structures of organic molecules have been only recently developed and to date have been applied only in an exploratory way. Nevertheless, recent advances have demonstrated that molecular isotopic structures provide distinctive records of biosynthetic origins, conditions and mechanisms of chemical transformation during burial, and forensic fingerprints of exceptional specificity. This paper provides a review of this young field, which is organized to follow the evolution of molecular isotopic structure from biosynthesis, through diagenesis, catagenesis and metamorphism.
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Affiliation(s)
- John M. Eiler
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125
| | - Matthieu Clog
- University of Glasgow, Glasgow G12 8QQ, Scotland, UK
| | | | - Max Lloyd
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125
| | - Alison Piasecki
- Department of Earth Science, University of Bergen, 5020 Bergen, Norway
| | - Camilo Ponton
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125
| | - Hao Xie
- Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125
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43
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Large historical growth in global terrestrial gross primary production. Nature 2017; 544:84-87. [PMID: 28382993 DOI: 10.1038/nature22030] [Citation(s) in RCA: 70] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2012] [Accepted: 02/23/2017] [Indexed: 11/08/2022]
Abstract
Growth in terrestrial gross primary production (GPP)-the amount of carbon dioxide that is 'fixed' into organic material through the photosynthesis of land plants-may provide a negative feedback for climate change. It remains uncertain, however, to what extent biogeochemical processes can suppress global GPP growth. As a consequence, modelling estimates of terrestrial carbon storage, and of feedbacks between the carbon cycle and climate, remain poorly constrained. Here we present a global, measurement-based estimate of GPP growth during the twentieth century that is based on long-term atmospheric carbonyl sulfide (COS) records, derived from ice-core, firn and ambient air samples. We interpret these records using a model that simulates changes in COS concentration according to changes in its sources and sinks-including a large sink that is related to GPP. We find that the observation-based COS record is most consistent with simulations of climate and the carbon cycle that assume large GPP growth during the twentieth century (31% ± 5% growth; mean ± 95% confidence interval). Although this COS analysis does not directly constrain models of future GPP growth, it does provide a global-scale benchmark for historical carbon-cycle simulations.
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44
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Sleen P, Zuidema PA, Pons TL. Stable isotopes in tropical tree rings: theory, methods and applications. Funct Ecol 2017. [DOI: 10.1111/1365-2435.12889] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Peter Sleen
- Forest Ecology and Forest Management Group Wageningen University & Research Droevendaalsesteeg 3 6708 PB Wageningen The Netherlands
- Marine Science Institute University of Texas at Austin 750 Channel View Drive Port Aransas TX78373 USA
| | - Pieter A. Zuidema
- Forest Ecology and Forest Management Group Wageningen University & Research Droevendaalsesteeg 3 6708 PB Wageningen The Netherlands
| | - Thijs L. Pons
- Plant Ecophysiology Institute of Environmental Biology Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands
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45
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Gong XY, Schäufele R, Lehmeier CA, Tcherkez G, Schnyder H. Atmospheric CO 2 mole fraction affects stand-scale carbon use efficiency of sunflower by stimulating respiration in light. PLANT, CELL & ENVIRONMENT 2017; 40:401-412. [PMID: 28024100 DOI: 10.1111/pce.12886] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2016] [Revised: 12/02/2016] [Accepted: 12/11/2016] [Indexed: 05/26/2023]
Abstract
Plant carbon-use-efficiency (CUE), a key parameter in carbon cycle and plant growth models, quantifies the fraction of fixed carbon that is converted into net primary production rather than respired. CUE has not been directly measured, partly because of the difficulty of measuring respiration in light. Here, we explore if CUE is affected by atmospheric CO2 . Sunflower stands were grown at low (200 μmol mol-1 ) or high CO2 (1000 μmol mol-1 ) in controlled environment mesocosms. CUE of stands was measured by dynamic stand-scale 13 C labelling and partitioning of photosynthesis and respiration. At the same plant age, growth at high CO2 (compared with low CO2 ) led to 91% higher rates of apparent photosynthesis, 97% higher respiration in the dark, yet 143% higher respiration in light. Thus, CUE was significantly lower at high (0.65) than at low CO2 (0.71). Compartmental analysis of isotopic tracer kinetics demonstrated a greater commitment of carbon reserves in stand-scale respiratory metabolism at high CO2 . Two main processes contributed to the reduction of CUE at high CO2 : a reduced inhibition of leaf respiration by light and a diminished leaf mass ratio. This work highlights the relevance of measuring respiration in light and assessment of the CUE response to environment conditions.
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Affiliation(s)
- Xiao Ying Gong
- Lehrstuhl für Grünlandlehre, Technische Universität München, Alte Akademie 12, 85354, Freising, Germany
| | - Rudi Schäufele
- Lehrstuhl für Grünlandlehre, Technische Universität München, Alte Akademie 12, 85354, Freising, Germany
| | | | - Guillaume Tcherkez
- Research School of Biology, ANU College of Medicine, Biology and Environment, Australian National University, Canberra, Australian Capital Territory, 0200, Australia
| | - Hans Schnyder
- Lehrstuhl für Grünlandlehre, Technische Universität München, Alte Akademie 12, 85354, Freising, Germany
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Jézéquel T, Joubert V, Giraudeau P, Remaud GS, Akoka S. The new face of isotopic NMR at natural abundance. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:77-90. [PMID: 27921330 DOI: 10.1002/mrc.4548] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Revised: 10/28/2016] [Accepted: 11/02/2016] [Indexed: 05/26/2023]
Abstract
The most widely used method for isotope analysis at natural abundance is isotope ratio monitoring by Mass Spectrometry (irm-MS) which provides bulk isotopic composition in 2 H, 13 C, 15 N, 18 O or 34 S. However, in the 1980s, the direct access to Site-specific Natural Isotope Fractionation by Nuclear Magnetic Resonance (SNIF-NMRTM ) was immediately recognized as a powerful technique to authenticate the origin of natural or synthetic products. The initial - and still most popular - application consisted in detecting the chaptalization of wines by irm-2 H NMR. The approach has been extended to a wide range of methodologies over the last decade, paving the way to a wide range of applications, not only in the field of authentication but also to study metabolism. In particular, the emerging irm-13 C NMR approach delivers direct access to position-specific 13 C isotope content at natural abundance. After highlighting the application scope of irm-NMR (2 H and 13 C), this article describes the major improvements which made possible to reach the required accuracy of 1‰ (0.1%) in irm-13 C NMR. The last part of the manuscript summarizes the different steps to perform isotope analysis as a function of the sample properties (concentration, peak overlap) and the kind of targeted isotopic information (authentication, affiliation). Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Tangi Jézéquel
- Université de Nantes, CNRS, CEISAM UMR 6230, Nantes, France
| | | | - Patrick Giraudeau
- Université de Nantes, CNRS, CEISAM UMR 6230, Nantes, France
- Institut Universitaire de France, Paris, France
| | | | - Serge Akoka
- Université de Nantes, CNRS, CEISAM UMR 6230, Nantes, France
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Zhou Y, Grice K, Stuart-Williams H, Hocart CH, Gessler A, Farquhar GD. Hydrogen isotopic differences between C 3 and C 4 land plant lipids: consequences of compartmentation in C 4 photosynthetic chemistry and C 3 photorespiration. PLANT, CELL & ENVIRONMENT 2016; 39:2676-2690. [PMID: 27566133 DOI: 10.1111/pce.12821] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2016] [Accepted: 08/17/2016] [Indexed: 06/06/2023]
Abstract
The 2 H/1 H ratio of carbon-bound H in biolipids holds potential for probing plant lipid biosynthesis and metabolism. The biochemical mechanism underlying the isotopic differences between lipids from C3 and C4 plants is still poorly understood. GC-pyrolysis-IRMS (gas chromatography-pyrolysis-isotope ratio mass spectrometry) measurement of the 2 H/1 H ratio of leaf lipids from controlled and field grown plants indicates that the biochemical isotopic fractionation (ε2 Hlipid_biochem ) differed between C3 and C4 plants in a pathway-dependent manner: ε2 HC4 > ε2 HC3 for the acetogenic pathway, ε2 HC4 < ε2 HC3 for the mevalonic acid pathway and the 1-deoxy-D-xylulose 5-phosphate pathway across all species examined. It is proposed that compartmentation of photosynthetic CO2 fixation into C4 mesophyll (M) and bundle sheath (BS) cells and suppression of photorespiration in C4 M and BS cells both result in C4 M chloroplastic pyruvate - the precursor for acetogenic pathway - being more depleted in 2 H relative to pyruvate in C3 cells. In addition, compartmentation in C4 plants also results in (i) the transferable H of NADPH being enriched in 2 H in C4 M chloroplasts compared with that in C3 chloroplasts for the 1-deoxy-D-xylulose 5-phosphate pathway pathway and (ii) pyruvate relatively 2 H-enriched being used for the mevalonic acid pathway in the cytosol of BS cells in comparison with that in C3 cells.
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Affiliation(s)
- Youping Zhou
- School of Chemistry and Chemical Engineering, Shaanxi University of Science and Technology, Xi'an, 710021, China
- WA-Organic and Isotope Geochemistry Centre, The Institute for Geoscience Research, Curtin University, Perth, 6845, Australia
- Institute for Landscape Biogeochemistry, ZALF, Müncheberg, 15374, Germany
- Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, China
| | - Kliti Grice
- WA-Organic and Isotope Geochemistry Centre, The Institute for Geoscience Research, Curtin University, Perth, 6845, Australia
| | | | - Charles H Hocart
- Research School of Biology, Australian National University, Canberra, 2601, Australia
| | - Arthur Gessler
- Institute for Landscape Biogeochemistry, ZALF, Müncheberg, 15374, Germany
- Swiss Federal Institute for Forest, Snow and Landscape Research, Birmensdorf, 8903, Switzerland
| | - Graham D Farquhar
- Research School of Biology, Australian National University, Canberra, 2601, Australia
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48
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Pugh TAM, Müller C, Arneth A, Haverd V, Smith B. Key knowledge and data gaps in modelling the influence of CO 2 concentration on the terrestrial carbon sink. JOURNAL OF PLANT PHYSIOLOGY 2016; 203:3-15. [PMID: 27233774 DOI: 10.1016/j.jplph.2016.05.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2016] [Revised: 04/29/2016] [Accepted: 05/02/2016] [Indexed: 06/05/2023]
Abstract
Primary productivity of terrestrial vegetation is expected to increase under the influence of increasing atmospheric carbon dioxide concentrations ([CO2]). Depending on the fate of such additionally fixed carbon, this could lead to an increase in terrestrial carbon storage, and thus a net terrestrial sink of atmospheric carbon. Such a mechanism is generally believed to be the primary global driver behind the observed large net uptake of anthropogenic CO2 emissions by the biosphere. Mechanisms driving CO2 uptake in the Terrestrial Biosphere Models (TBMs) used to attribute and project terrestrial carbon sinks, including that from increased [CO2], remain in large parts unchanged since those models were conceived two decades ago. However, there exists a large body of new data and understanding providing an opportunity to update these models, and directing towards important topics for further research. In this review we highlight recent developments in understanding of the effects of elevated [CO2] on photosynthesis, and in particular on the fate of additionally fixed carbon within the plant with its implications for carbon turnover rates, on the regulation of photosynthesis in response to environmental limitations on in-plant carbon sinks, and on emergent ecosystem responses. We recommend possible avenues for model improvement and identify requirements for better data on core processes relevant to the understanding and modelling of the effect of increasing [CO2] on the global terrestrial carbon sink.
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Affiliation(s)
- T A M Pugh
- School of Geography, Earth & Environmental Sciences and Birmingham Institute of Forest Research, University of Birmingham, Birmingham, B15 2TT, United Kingdom; Karlsruhe Institute of Technology, Institute of Meteorology and Climate Research-Atmospheric Environmental Research (IMK-IFU), Kreuzeckbahnstraße 19, 82467 Garmisch-Partenkirchen, Germany.
| | - C Müller
- Potsdam Institute for Climate Impact Research, Potsdam, Germany
| | - A Arneth
- Karlsruhe Institute of Technology, Institute of Meteorology and Climate Research-Atmospheric Environmental Research (IMK-IFU), Kreuzeckbahnstraße 19, 82467 Garmisch-Partenkirchen, Germany
| | - V Haverd
- CSIRO Oceans and Atmosphere, P.O. Box 3023, Canberra ACT 2601, Australia
| | - B Smith
- Department of Physical Geography and Ecosystem Science, Lund University, SE-223 62 Lund, Sweden
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