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Rohilla M, Mazumder A, Chowdhury D, Bhardwaj R, Kumar Mondal T. Understanding natural genetic variation for nutritional quality in grain and identification of superior haplotypes in deepwater rice genotypes of Assam, India. Gene 2024; 928:148801. [PMID: 39068998 DOI: 10.1016/j.gene.2024.148801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 07/21/2024] [Accepted: 07/24/2024] [Indexed: 07/30/2024]
Abstract
Rice grown under deepwater ecosystem is considered to be natural farming and hence they are considered to be input efficient. Thus, to identify gene responsible for nutritional content under natural conditions, a genome-wide association study (GWAS)was performed. GWAS identified single nucleotide polymorphisms (SNPs) significantly associated with various nutritional quality traits such as Zn (mg/kg), Fe (mg/kg), Protein (%), Oil (%), Amylose (%), Starch (%), Phytic acid (%), Phenol (%) and TDF (%) in 184 deepwater rice accessions evaluated over 2 consecutive years. A total of 278 SNPs distributed across 12 chromosomes were found to be significantly associated with Zn, Oil and Phenol content. Among them, eight high confidence SNPs were significant and identified on chr1 (AX-95933712), chr7 (AX-95957036), and chr8 (AX-95965181) for Zn content. Similarly, on chr2 (AX-95945186), chr8 (AX-95964718), and chr11 (AX-95961099) have been found to be associated with Oil content and on chr3 (AX-95922121) and chr4 (AX-95963889) for Phenol content. Genomic regions of ± 220 kb flanking the three consistent lowest p value containing SNPs for each trait were considered for finding superior haplotypes. These SNPs showed significant phenotypic variations with different identified haplotype blocks. The allelic variations with phenotypes were considered to be superior haplotypes i.e., Block 1: Hap 1 (ACCC) for high Zn content, Block 2: Hap 1 (CT) for high Oil content, and Block 2: Hap 1(CGGG) for low Phenol content. The discovered superior haplotype with high nutritional content could be important for understanding the mechanisms involving nutrient use efficiency. Thus, the present study demonstrated that developing rice varieties with appropriate nutritional quality traits will be possible through the incorporation of such superior haplotypes in breeding programs.
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Affiliation(s)
- Megha Rohilla
- ICAR-National Institute for Plant Biotechnology, LBS Centre, Pusa, New Delhi 110012, India
| | - Abhishek Mazumder
- ICAR-National Institute for Plant Biotechnology, LBS Centre, Pusa, New Delhi 110012, India
| | - Dhiren Chowdhury
- Regional Agricultural Research Station, Assam Agricultural University, North Lakhimpur, Assam, India
| | - Rakesh Bhardwaj
- ICAR-National Bureau of Plant Genetic Resources, New Delhi 110012, India
| | - Tapan Kumar Mondal
- ICAR-National Institute for Plant Biotechnology, LBS Centre, Pusa, New Delhi 110012, India.
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Caine RS, Khan MS, Brench RA, Walker HJ, Croft HL. Inside-out: Synergising leaf biochemical traits with stomatal-regulated water fluxes to enhance transpiration modelling during abiotic stress. PLANT, CELL & ENVIRONMENT 2024; 47:3494-3513. [PMID: 38533601 DOI: 10.1111/pce.14892] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 02/17/2024] [Accepted: 03/08/2024] [Indexed: 03/28/2024]
Abstract
As the global climate continues to change, plants will increasingly experience abiotic stress(es). Stomata on leaf surfaces are the gatekeepers to plant interiors, regulating gaseous exchanges that are crucial for both photosynthesis and outward water release. To optimise future crop productivity, accurate modelling of how stomata govern plant-environment interactions will be crucial. Here, we synergise optical and thermal imaging data to improve modelled transpiration estimates during water and/or nutrient stress (where leaf N is reduced). By utilising hyperspectral data and partial least squares regression analysis of six plant traits and fluxes in wheat (Triticum aestivum), we develop a new spectral vegetation index; the Combined Nitrogen and Drought Index (CNDI), which can be used to detect both water stress and/or nitrogen deficiency. Upon full stomatal closure during drought, CNDI shows a strong relationship with leaf water content (r2 = 0.70), with confounding changes in leaf biochemistry. By incorporating CNDI transformed with a sigmoid function into thermal-based transpiration modelling, we have increased the accuracy of modelling water fluxes during abiotic stress. These findings demonstrate the potential of using combined optical and thermal remote sensing-based modelling approaches to dynamically model water fluxes to improve both agricultural water usage and yields.
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Affiliation(s)
- Robert S Caine
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, South Yorkshire, UK
- School of Biosciences, Institute for Sustainable Food, University of Sheffield, South Yorkshire, UK
| | - Muhammad S Khan
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, South Yorkshire, UK
| | - Robert A Brench
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, South Yorkshire, UK
| | - Heather J Walker
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, South Yorkshire, UK
- School of Biosciences, Institute for Sustainable Food, University of Sheffield, South Yorkshire, UK
- biOMICS Mass Spectrometry Facility, School of Biosciences, University of Sheffield, South Yorkshire, UK
| | - Holly L Croft
- Plants, Photosynthesis and Soil, School of Biosciences, University of Sheffield, South Yorkshire, UK
- School of Biosciences, Institute for Sustainable Food, University of Sheffield, South Yorkshire, UK
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Conesa HM, Párraga-Aguado IM, Jiménez FJ, Querejeta JI. Evaluation of the trade-off between water use efficiency and nutrient use efficiency in two semiarid coniferous tree species growing on an organic amended metalliferous mine tailing substrate. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 940:173607. [PMID: 38825195 DOI: 10.1016/j.scitotenv.2024.173607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Revised: 05/26/2024] [Accepted: 05/27/2024] [Indexed: 06/04/2024]
Abstract
We evaluated the ecophysiological responses of two semiarid coniferous tree species, Pinus halepensis and Tetraclinis articulata, growing on a nutrient-poor metalliferous mine tailings substrate to organic amendments (biochar and/or organic municipal waste). The trees were grown in mesocosms under irrigated conditions for 20 months. Then, a comprehensive characterization of soil and plant parameters (including stable isotopes) was carried out. Treatments containing municipal waste showed better soil fertility indicators (approximately 2-fold higher organic carbon and total nitrogen concentrations) and higher plant biomass (up to 5-fold higher) than unamended and only biochar treatments. Trees in most of the treatments exhibited leaf N/P ratios <14 indicating severe N limitation of plant growth. Metal uptake was below phytotoxic levels across all the treatments. Leaf δ13C values correlated positively with δ18O across treatments for both species indicating increasing water use efficiency with tighter stomatal regulation of water flux, and with T. articulata exhibiting tighter stomatal control (higher δ18O values) than P. halepensis. Trees in treatments containing only biochar did not differ in ecophysiological performance from those in the unamended treatments. In contrast, leaf stable isotopes revealed sharply increased of time-integrated photosynthetic activity (favoured by higher leaf N concentrations) combined with lower time-integrated stomatal conductance in the treatments containing municipal waste, indicating greatly enhanced water use efficiency in better nourished plants. Trade-offs between water use efficiency and nutrient (N and P) use efficiency were evident across treatments, with higher leaf nutrient concentrations associated with higher water use efficiency, at the cost of a lower nutrient use efficiency. These trade-offs were not impaired by the high metal concentrations of the tailings substrate, indicating that ecophysiological adjustments in response to changes in plant nutrient status promoted by the addition of organic amendments are critical for the adaptability of native tree species employed in the phytostabilisation of mine tailings.
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Affiliation(s)
- Héctor M Conesa
- Universidad Politécnica de Cartagena, Escuela Técnica Superior de Ingeniería Agronómica Departamento de Ingeniería Agronómica, Paseo Alfonso XIII, 48, 30203 Cartagena, Spain.
| | - Isabel M Párraga-Aguado
- Universidad Politécnica de Cartagena, Escuela Técnica Superior de Ingeniería Agronómica Departamento de Ingeniería Agronómica, Paseo Alfonso XIII, 48, 30203 Cartagena, Spain; IES Juan Sebastián Elcano, Carretera de Tentegorra, s/n, 30205 Cartagena, Spain.
| | - Francisco J Jiménez
- BIOCYMA, Consultora en Medio Ambiente y Calidad, S.L. Calle Azarbe del Papel, 10, 30007 Murcia, Spain.
| | - José-Ignacio Querejeta
- Centro de Edafología y Biología Aplicada del Segura (CEBAS), Consejo Superior de Investigaciones Científicas (CSIC), 30100 Murcia, Spain.
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Liao Z, Zhu L, Liu L, Kreuzwieser J, Werner C, Du B. Comparison of Growth and Metabolomic Profiles of Two Afforestation Cypress Species Cupressus chengiana and Platycladus orientalis Grown at Minjiang Valley in Southwest China. Metabolites 2024; 14:453. [PMID: 39195549 DOI: 10.3390/metabo14080453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2024] [Revised: 08/14/2024] [Accepted: 08/15/2024] [Indexed: 08/29/2024] Open
Abstract
In recent years, afforestation has been conducted in China's hot and dry valleys. However, there is still a paucity of knowledge regarding the performance of tree species in these semi-arid regions, particularly with regard to interspecies differences. The present study compares the growth and metabolome characteristics of two widely used cypress species, namely Cupressus chengiana and Platycladus orientalis, grown at two sites with distinct climate conditions in the hot and dry Minjiang Valley in southwestern China. The findings indicate that C. chengiana trees exhibit superior growth rates compared to P. orientalis trees at both study sites. In comparison to P. orientalis trees, C. chengiana trees demonstrated a greater tendency to close their stomata in order to prevent water loss at the hotter and drier site, Llianghekou (LHK). Additionally, C. chengiana trees exhibited significantly lower hydrogen peroxide levels than P. orientalis trees, either due to lower production and/or higher scavenging of reactive oxygen species. C. chengiana trees accumulated soluble sugars as well as sugar derivatives, particularly those involved in sucrose and galactose metabolisms under stressful conditions. The species-specific differences were also reflected in metabolites involved in the tricarboxylic acid cycle, nitrogen, and secondary metabolisms. The metabolome profiles of the two species appeared to be influenced by the prevailing climatic conditions. It appeared that the trees at the drier and hotter site, LHK, were capable of efficient nitrogen uptake from the soil despite the low soil nitrogen concentration. This study is the first to compare the growth performance and metabolic profiles of two widely used tree species with high resistance to adverse conditions. In addition to the species-specific differences and adaptations to different sites, the present study also provides insights into potential management strategies to alleviate abiotic stress, particularly with regard to nitrogen nutrients, in the context of climate change.
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Affiliation(s)
- Zhengqiao Liao
- College of Life Science and Biotechnology, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
- Ecological Security and Protection Key Laboratory of Sichuan Province, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
| | - Lijun Zhu
- College of Life Science and Biotechnology, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
| | - Lei Liu
- College of Life Science and Biotechnology, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
- Ecological Security and Protection Key Laboratory of Sichuan Province, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
| | - Jürgen Kreuzwieser
- Chair of Ecosystem Physiology, Institute of Forest Sciences, University of Freiburg, Georges-Köhler-Allee 53, D-79110 Freiburg, Germany
| | - Christiane Werner
- Chair of Ecosystem Physiology, Institute of Forest Sciences, University of Freiburg, Georges-Köhler-Allee 53, D-79110 Freiburg, Germany
| | - Baoguo Du
- College of Life Science and Biotechnology, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
- Ecological Security and Protection Key Laboratory of Sichuan Province, Mianyang Normal University, Mianxing Road West 166, Mianyang 621000, China
- Chair of Ecosystem Physiology, Institute of Forest Sciences, University of Freiburg, Georges-Köhler-Allee 53, D-79110 Freiburg, Germany
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Wu XP, Gao X, Zhang R, Luan J, Wang Y, Liu S. Nitrogen addition alleviates water loss of Moso bamboo (Phyllostachys edulis) under drought by affecting light-induced stomatal responses. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 938:173615. [PMID: 38815830 DOI: 10.1016/j.scitotenv.2024.173615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2024] [Revised: 05/26/2024] [Accepted: 05/27/2024] [Indexed: 06/01/2024]
Abstract
The combined climate-change-evoked drought and nitrogen (N) deposition have severely affected plant carbon and water relations governed by stomata. However, the interplay between steady-state and dynamic stomatal behavior responses to light remains unclear regarding its impact on plant water and carbon relations. The objective here was to investigate whether light-induced stomatal dynamics could mitigate the adverse effects of steady-state gas exchange on water conservation or photosynthesis under drought and N addition conditions. We conducted a manipulative experiment to investigate the impacts of throughfall reduction, N addition, and their combination on light-induced stomatal and photosynthetic dynamics in a Moso bamboo (Phyllostachys edulis) forest. We determined the influence of stomal response rate on water loss and photosynthesis, and further assessed whether it mitigated the effects of steady-state gas exchange (gs). We found that Moso bamboo decreased gs under throughfall reduction, while accelerated stomatal opening and biochemical activation when irradiance increased, which reduced the lag in photosynthesis during the induction period. In contrast, under the combined throughfall reduction and N addition condition, Moso bamboo increased gs but showed faster stomatal closure, which decreased the percentage of transpiration following a decrease in light intensity. Our findings indicate that stomatal dynamic behavior may depend on the effects of steady-state gas exchange on water conservation and carbon uptake under different soil water and N conditions. These discoveries contribute to our understanding of the coupling mechanisms of plant water use and carbon uptake in the context of global changes.
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Affiliation(s)
- Xi-Pin Wu
- Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), Northwest University, Xi'an, Shaanxi 710069, China; Key Laboratory of National Forestry and Grassland Administration/Beijing for Bamboo & Rattan Science and Technology, International Centre for Bamboo and Rattan, Beijing 100102, China
| | - Xiaomin Gao
- Key Laboratory of National Forestry and Grassland Administration/Beijing for Bamboo & Rattan Science and Technology, International Centre for Bamboo and Rattan, Beijing 100102, China; Key Laboratory of Forest Ecology and Environment of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China
| | - Ruichang Zhang
- Key Laboratory of Resource Biology and Biotechnology in Western China (Ministry of Education), Northwest University, Xi'an, Shaanxi 710069, China
| | - Junwei Luan
- Key Laboratory of National Forestry and Grassland Administration/Beijing for Bamboo & Rattan Science and Technology, International Centre for Bamboo and Rattan, Beijing 100102, China
| | - Yi Wang
- Key Laboratory of National Forestry and Grassland Administration/Beijing for Bamboo & Rattan Science and Technology, International Centre for Bamboo and Rattan, Beijing 100102, China
| | - Shirong Liu
- Key Laboratory of Forest Ecology and Environment of National Forestry and Grassland Administration, Ecology and Nature Conservation Institute, Chinese Academy of Forestry, Beijing 100091, China.
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6
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Ma X, Qin Z, Johnson KB, Sweat LH, Dai S, Li G, Li C. Transcriptomic responses to shifts in light and nitrogen in two congeneric diatom species. Front Microbiol 2024; 15:1437274. [PMID: 39206371 PMCID: PMC11349689 DOI: 10.3389/fmicb.2024.1437274] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2024] [Accepted: 08/02/2024] [Indexed: 09/04/2024] Open
Abstract
Light and nitrogen availability are basic requirements for photosynthesis. Changing in light intensity and nitrogen concentration may require adaptive physiological and life process changes in phytoplankton cells. Our previous study demonstrated that two Thalassiosira species exhibited, respectively, distinctive physiological responses to light and nitrogen stresses. Transcriptomic analyses were employed to investigate the mechanisms behind the different physiological responses observed in two diatom species of the genus Thalassiosira. The results indicate that the congeneric species are different in their cellular responses to the same shifting light and nitrogen conditions. When conditions changed to high light with low nitrate (HLLN), the large-celled T. punctigera was photodamaged. Thus, the photosynthesis pathway and carbon fixation related genes were significantly down-regulated. In contrast, the small-celled T. pseudonana sacrificed cellular processes, especially amino acid metabolisms, to overcome the photodamage. When changing to high light with high nitrate (HLHN) conditions, the additional nitrogen appeared to compensate for the photodamage in the large-celled T. punctigera, with the tricarboxylic acid cycle (TCA cycle) and carbon fixation significantly boosted. Consequently, the growth rate of T. punctigera increased, which suggest that the larger-celled species is adapted for forming post-storm algal blooms. The impact of high light stress on the small-celled T. pseudonana was not mitigated by elevated nitrate levels, and photodamage persisted.
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Affiliation(s)
- Xiao Ma
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
- Guangdong Province Key Laboratory of Applied Marine Biology, Guangzhou, China
| | - Zhen Qin
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
| | - Kevin B. Johnson
- Department of Biological Sciences, College of Science and Mathematics, Tarleton State University, Stephenville, TX, United States
| | - L. Holly Sweat
- Smithsonian Marine Station, Fort Pierce, FL, United States
| | - Sheng Dai
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
- Guangdong Province Key Laboratory of Applied Marine Biology, Guangzhou, China
| | - Gang Li
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
- Guangdong Province Key Laboratory of Applied Marine Biology, Guangzhou, China
- Daya Bay Marine Biology Research Station, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Shenzhen, China
| | - Chaolun Li
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China
- Guangdong Province Key Laboratory of Applied Marine Biology, Guangzhou, China
- University of Chinese Academy of Sciences, Beijing, China
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Tian M, Salmon Y, Lintunen A, Oren R, Hölttä T. Seasonal dynamics and punctuated carbon sink reduction suggest photosynthetic capacity of boreal silver birch is reduced by the accumulation of hexose. THE NEW PHYTOLOGIST 2024; 243:894-908. [PMID: 38853424 DOI: 10.1111/nph.19883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Accepted: 05/15/2024] [Indexed: 06/11/2024]
Abstract
The 'assimilates inhibition hypothesis' posits that accumulation of nonstructural carbohydrates (NSCs) in leaves reduces leaf net photosynthetic rate, thus internally regulating photosynthesis. Experimental work provides equivocal support mostly under controlled conditions without identifying a particular NSC as involved in the regulation. We combined 3-yr in situ leaf gas exchange observations (natural dynamics) in the upper crown of mature Betula pendula simultaneously with measurements of concentrations of sucrose, hexoses (glucose and fructose), and starch, and similar measurements during several one-day shoot girdling (perturbation dynamics). Leaf water potential and water and nitrogen content were measured to account for their possible contribution to photosynthesis regulation. Leaf photosynthetic capacity (A/Ci) was temporally negatively correlated with NSC accumulation under both natural and perturbation states. For developed leaves, leaf hexose concentration explained A/Ci variation better than environmental variables (temperature history and daylength); the opposite was observed for developing leaves. The weaker correlations between NSCs and A/Ci in developing leaves may reflect their strong internal sink strength for carbohydrates. By contrast, the strong decline in photosynthetic capacity with NSCs accumulation in mature leaves, observed most clearly with hexose, and even more tightly with its constituents, provides support for the role of assimilates in regulating photosynthesis under natural conditions.
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Affiliation(s)
- Manqing Tian
- Department of Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, PO Box 27, Helsinki, 00014, Finland
| | - Yann Salmon
- Department of Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, PO Box 27, Helsinki, 00014, Finland
- Institute for Atmospheric and Earth System Research, Faculty of Science, University of Helsinki, PO Box 64, Helsinki, 00014, Finland
| | - Anna Lintunen
- Department of Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, PO Box 27, Helsinki, 00014, Finland
- Institute for Atmospheric and Earth System Research, Faculty of Science, University of Helsinki, PO Box 64, Helsinki, 00014, Finland
| | - Ram Oren
- Department of Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, PO Box 27, Helsinki, 00014, Finland
- Nicholas School of the Environment and Pratt School of Engineering, Duke University, Durham, NC, 27708, USA
| | - Teemu Hölttä
- Department of Forest Sciences, Faculty of Agriculture and Forestry, University of Helsinki, PO Box 27, Helsinki, 00014, Finland
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Wang G, Mao J, Ji M, Wang W, Fu J. A comprehensive assessment of photosynthetic acclimation to shade in C4 grass (Cynodon dactylon (L.) Pers.). BMC PLANT BIOLOGY 2024; 24:591. [PMID: 38902617 PMCID: PMC11191358 DOI: 10.1186/s12870-024-05242-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 06/03/2024] [Indexed: 06/22/2024]
Abstract
BACKGROUND Light deficit in shaded environment critically impacts the growth and development of turf plants. Despite this fact, past research has predominantly concentrated on shade avoidance rather than shade tolerance. To address this, our study examined the photosynthetic adjustments of Bermudagrass when exposed to varying intensities of shade to gain an integrative understanding of the shade response of C4 turfgrass. RESULTS We observed alterations in photosynthetic pigment-proteins, electron transport and its associated carbon and nitrogen assimilation, along with ROS-scavenging enzyme activity in shaded conditions. Mild shade enriched Chl b and LHC transcripts, while severe shade promoted Chl a, carotenoids and photosynthetic electron transfer beyond QA- (ET0/RC, φE0, Ψ0). The study also highlighted differential effects of shade on leaf and root components. For example, Soluble sugar content varied between leaves and roots as shade diminished SPS, SUT1 but upregulated BAM. Furthermore, we observed that shading decreased the transcriptional level of genes involving in nitrogen assimilation (e.g. NR) and SOD, POD, CAT enzyme activities in leaves, even though it increased in roots. CONCLUSIONS As shade intensity increased, considerable changes were noted in light energy conversion and photosynthetic metabolism processes along the electron transport chain axis. Our study thus provides valuable theoretical groundwork for understanding how C4 grass acclimates to shade tolerance.
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Affiliation(s)
- Guangyang Wang
- Coastal Salinity Tolerant Grass Engineering and Technology Research Center, Ludong University, Yantai, 264025, Shandong, China
| | - Jinyan Mao
- College of Agriculture, Ludong University, Yantai, 264025, Shandong, China
| | - Mingxia Ji
- Coastal Salinity Tolerant Grass Engineering and Technology Research Center, Ludong University, Yantai, 264025, Shandong, China
| | - Wei Wang
- Coastal Salinity Tolerant Grass Engineering and Technology Research Center, Ludong University, Yantai, 264025, Shandong, China
| | - Jinmin Fu
- Coastal Salinity Tolerant Grass Engineering and Technology Research Center, Ludong University, Yantai, 264025, Shandong, China.
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Tanaka R, Kawamata K, Urashima M, Matsuda K, Izuta T, Watanabe M. Vertical gradient of needle ozone uptake within the canopy of Cryptomeria japonica. ENVIRONMENTAL RESEARCH 2024; 258:119464. [PMID: 38908659 DOI: 10.1016/j.envres.2024.119464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 06/10/2024] [Accepted: 06/19/2024] [Indexed: 06/24/2024]
Abstract
Leaf ozone uptake through the stomata is an important index for the ozone risk assessments on trees. Stomatal conductance (gs) and ozone concentration ([O3]), determinants of the leaf ozone uptake, are known to show vertical gradients within a tree canopy. However, less is known about the within-canopy vertical gradient of leaf ozone uptake. This study was aimed to elucidate how the vertical gradient of [O3] and gs affect needle ozone uptake within a canopy of mature Cryptomeria japonica trees in a suburban forest at Tokyo, Japan. For this purpose, a multilayer gas exchange model was applied to estimate the vertical gradient of needle gs and the accumulated ozone uptake during the study period (POD1, Phytotoxic Ozone Dose above a threshold of 1 nmol m-2 s-1). In addition, we also tested several scenarios of vertical gradient of [O3] within the canopy for sensitivity analysis. The POD1 was declined from the top to the bottom of the canopy. This tendency strongly depended on the vertical gradient of gs and was hardly affected by the changes in simulated vertical reductions of the [O3]. We further assessed the photosynthesis of sunlit needles (needles absorbing both direct and diffuse light) and shaded needles (needles only absorbing diffuse light). The photosynthesis of shaded needles in the upper half of the canopy made a great contribution to the entire canopy photosynthesis. In addition, given that their POD1 was lower than that of sunlit needles, ozone may affect sunlit and shaded needles differently. We concluded that these considerations should be incorporated into modeling of the calculation of ozone uptake for mature trees to make accurate predictions of the ozone effects on trees at the canopy scale.
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Affiliation(s)
- Ryoji Tanaka
- United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Kenta Kawamata
- Graduate School of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Miyu Urashima
- Graduate School of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Kazuhide Matsuda
- Institute of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Takeshi Izuta
- Institute of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Makoto Watanabe
- Institute of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
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Massonnet C, Chuste PA, Zeller B, Tillard P, Gerard B, Cheraft L, Breda N, Maillard P. Does long-term drought or repeated defoliation affect seasonal leaf N cycling in young beech trees? TREE PHYSIOLOGY 2024; 44:tpae054. [PMID: 38769932 DOI: 10.1093/treephys/tpae054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Revised: 05/14/2024] [Accepted: 05/17/2024] [Indexed: 05/22/2024]
Abstract
Forest trees adopt effective strategies to optimize nitrogen (N) use through internal N recycling. In the context of more recurrent environmental stresses due to climate change, the question remains of whether increased frequency of drought or defoliation threatens this internal N recycling strategy. We submitted 8-year-old beech trees to 2 years of either severe drought (Dro) or manual defoliation (Def) to create a state of N starvation. At the end of the second year before leaf senescence, we labeled the foliage of the Dro and Def trees, as well as that of control (Co) trees, with 15N-urea. Leaf N resorption, winter tree N storage (total N, 15N, amino acids, soluble proteins) and N remobilization in spring were evaluated for the three treatments. Defoliation and drought did not significantly impact foliar N resorption or N concentrations in organs in winter. Total N amounts in Def tree remained close to those in Co tree, but winter N was stored more in the branches than in the trunk and roots. Total N amount in Dro trees was drastically reduced (-55%), especially at the trunk level, but soluble protein concentrations increased in the trunk and fine roots compared with Co trees. During spring, 15N was mobilized from the trunk, branches and twigs of both Co and Def trees to support leaf growth. It was only provided through twig 15N remobilization in the Dro trees, thus resulting in extremely reduced Dro leaf N amounts. Our results suggest that stress-induced changes occur in N metabolism but with varying severity depending on the constraints: within-tree 15N transport and storage strategy changed in response to defoliation, whereas a soil water deficit induced a drastic reduction of the N amounts in all the tree organs. Consequently, N dysfunction could be involved in drought-induced beech tree mortality under the future climate.
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Affiliation(s)
- Catherine Massonnet
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Pierre-Antoine Chuste
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | | | - Pascal Tillard
- UMR 5004, Biochimie et Physiologie Moléculaire des Plantes, INRAE/CNRS/Montpellier SupAgro/Université Montpellier, Place Viala, 34060 Montpellier, Cedex 2, France
| | - Bastien Gerard
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Loucif Cheraft
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Nathalie Breda
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
| | - Pascale Maillard
- Université de Lorraine, AgroParisTech, INRAE, Silva, route d'Amance, 54280 Champenoux, France
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11
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Wei L, Li J, Qu K, Chen H, Wang M, Xia S, Cai H, Long XE, Miao Y, Liu D. Organic fertilizer application promotes the soil nitrogen cycle and plant starch and sucrose metabolism to improve the yield of Pinellia ternata. Sci Rep 2024; 14:12722. [PMID: 38830940 PMCID: PMC11148117 DOI: 10.1038/s41598-024-63564-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Accepted: 05/30/2024] [Indexed: 06/05/2024] Open
Abstract
Pinellia ternata (Thunb.) Breit is a traditional Chinese medicine with important pharmacological effects. However, its cultivation is challenged by soil degradation following excessive use of chemical fertilizer. We conducted an experiment exploring the effects of replacing chemical fertilizers with organic fertilizers (OF) on the growth and yield of P. ternata, as well as on the soil physicochemical properties and microbial community composition using containerized plants. Six fertilization treatments were evaluated, including control (CK), chemical fertilizer (CF), different proportions of replacing chemical fertilizer with organic fertilizer (OM1-4). Containerized P. ternata plants in each OF treatment had greater growth and yield than the CK and CF treatments while maintaining alkaloid content. The OM3 treatment had the greatest yield among all treatments, with an increase of 42.35% and 44.93% compared to the CK and CF treatments, respectively. OF treatments improved soil quality and fertility by enhancing the activities of soil urease (S-UE) and sucrase (S-SC) enzymes while increasing soil organic matter and trace mineral elements. OF treatments increased bacterial abundance and changed soil community structure. In comparison to the CK microbial groups enriched in OM3 were OLB13, Vicinamibacteraceae, and Blrii41. There were also changes in the abundance of gene transcripts among treatments. The abundance of genes involved in the nitrogen cycle in the OM3 has increased, specifically promoting the transformation of N-NO3- into N-NH4+, a type of nitrogen more easily absorbed by P. ternata. Also, genes involved in "starch and sucrose metabolism" and "plant hormone signal transduction" pathways were positively correlated to P. ternata yield and were upregulated in the OM3 treatment. Overall, OF in P. ternata cultivation is a feasible practice in advancing sustainable agriculture and is potentially profitable in commercial production.
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Affiliation(s)
- Lu Wei
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Jinxin Li
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Kaili Qu
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Hong Chen
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Mingxing Wang
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Shuaijie Xia
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Huixia Cai
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Xi-En Long
- School of Geographic Sciences, Nantong University, Nantong, 226019, Jiangsu, China
| | - Yuhuan Miao
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China
| | - Dahui Liu
- Pharmacy Faculty, Hubei University of Chinese Medicine, Wuhan, 430065, China.
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12
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Brooks MD, Szeto RC. Biological nitrogen fixation maintains carbon/nitrogen balance and photosynthesis at elevated CO 2. PLANT, CELL & ENVIRONMENT 2024; 47:2178-2191. [PMID: 38481026 DOI: 10.1111/pce.14873] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2023] [Revised: 01/17/2024] [Accepted: 02/22/2024] [Indexed: 04/30/2024]
Abstract
Understanding crop responses to elevated CO2 is necessary to meet increasing agricultural demands. Crops may not achieve maximum potential yields at high CO2 due to photosynthetic downregulation, often associated with nitrogen limitation. Legumes have been proposed to have an advantage at elevated CO2 due to their ability to exchange carbon for nitrogen. Here, the effects of biological nitrogen fixation (BNF) on the physiological and gene expression responses to elevated CO2 were examined at multiple nitrogen levels by comparing alfalfa mutants incapable of nitrogen fixation to wild-type. Elemental analysis revealed a role for BNF in maintaining shoot carbon/nitrogen (C/N) balance under all nitrogen treatments at elevated CO2, whereas the effect of BNF on biomass was only observed at elevated CO2 and the lowest nitrogen dose. Lower photosynthetic rates at were associated with the imbalance in shoot C/N. Genome-wide transcriptional responses were used to identify carbon and nitrogen metabolism genes underlying the traits. Transcription factors important to C/N signalling were identified from inferred regulatory networks. This work supports the hypothesis that maintenance of C/N homoeostasis at elevated CO2 can be achieved in plants capable of BNF and revealed important regulators in the underlying networks including an alfalfa (Golden2-like) GLK ortholog.
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Affiliation(s)
- Matthew D Brooks
- Global Change and Photosynthesis Research Unit, USDA ARS, Urbana, Illinois, USA
| | - Ronnia C Szeto
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
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13
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Liu X, Zhou S, Hu J, Zou X, Tie L, Li Y, Cui X, Huang C, Sardans J, Peñuelas J. Variations and trade-offs in leaf and culm functional traits among 77 woody bamboo species. BMC PLANT BIOLOGY 2024; 24:387. [PMID: 38724946 PMCID: PMC11084126 DOI: 10.1186/s12870-024-05108-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Accepted: 05/05/2024] [Indexed: 05/12/2024]
Abstract
BACKGROUND Woody bamboos are the only diverse large perennial grasses in mesic-wet forests and are widely distributed in the understory and canopy. The functional trait variations and trade-offs in this taxon remain unclear due to woody bamboo syndromes (represented by lignified culm of composed internodes and nodes). Here, we examined the effects of heritable legacy and occurrence site climates on functional trait variations in leaf and culm across 77 woody bamboo species in a common garden. We explored the trade-offs among leaf functional traits, the connection between leaf nitrogen (N), phosphorus (P) concentrations and functional niche traits, and the correlation of functional traits between leaves and culms. RESULTS The Bayesian mixed models reveal that the combined effects of heritable legacy (phylogenetic distances and other evolutionary processes) and occurrence site climates accounted for 55.10-90.89% of the total variation among species for each studied trait. The standardized major axis analysis identified trade-offs among leaf functional traits in woody bamboo consistent with the global leaf economics spectrum; however, compared to non-bamboo species, the woody bamboo exhibited lower leaf mass per area but higher N, P concentrations and assimilation, dark respiration rates. The canonical correlation analysis demonstrated a positive correlation (ρ = 0.57, P-value < 0.001) between leaf N, P concentrations and morphophysiology traits. The phylogenetic principal components and trait network analyses indicated that leaf and culm traits were clustered separately, with leaf assimilation and respiration rates associated with culm ground diameter. CONCLUSION Our study confirms the applicability of the leaf economics spectrum and the biogeochemical niche in woody bamboo taxa, improves the understanding of woody bamboo leaf and culm functional trait variations and trade-offs, and broadens the taxonomic units considered in plant functional trait studies, which contributes to our comprehensive understanding of terrestrial forest ecosystems.
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Affiliation(s)
- Xiong Liu
- College of Forestry, Sichuan Agricultural University, Chengdu, 611130, China
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River & Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, SICAU, Chengdu, 611130, China
- CREAF, Cerdanyola del Vallès, Catalonia, 08193, Spain
- Global Ecology Unit, CSIC, CREAF-CSIC-UAB, Bellaterra, Catalonia, 08193, Spain
| | - Shixing Zhou
- College of Forestry, Sichuan Agricultural University, Chengdu, 611130, China
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River & Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, SICAU, Chengdu, 611130, China
| | - Junxi Hu
- College of Forestry, Sichuan Agricultural University, Chengdu, 611130, China
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River & Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, SICAU, Chengdu, 611130, China
| | - Xingcheng Zou
- College of Forestry, Sichuan Agricultural University, Chengdu, 611130, China
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River & Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, SICAU, Chengdu, 611130, China
| | - Liehua Tie
- Institute for Forest Resources and Environment of Guizhou, Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, College of Forestry, Guizhou University, Guiyang, 550025, China
| | - Ying Li
- College of Grassland Science, Beijing Forestry University, Beijing, 100091, China
| | - Xinglei Cui
- College of Forestry, Sichuan Agricultural University, Chengdu, 611130, China
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River & Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, SICAU, Chengdu, 611130, China
| | - Congde Huang
- College of Forestry, Sichuan Agricultural University, Chengdu, 611130, China.
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River & Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, SICAU, Chengdu, 611130, China.
| | - Jordi Sardans
- CREAF, Cerdanyola del Vallès, Catalonia, 08193, Spain
- Global Ecology Unit, CSIC, CREAF-CSIC-UAB, Bellaterra, Catalonia, 08193, Spain
| | - Josep Peñuelas
- CREAF, Cerdanyola del Vallès, Catalonia, 08193, Spain
- Global Ecology Unit, CSIC, CREAF-CSIC-UAB, Bellaterra, Catalonia, 08193, Spain
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14
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Zhang H, Lan Y, Jiang C, Cui Y, He Y, Deng J, Lin M, Ye S. Leaf Traits Explain the Growth Variation and Nitrogen Response of Eucalyptus urophylla × Eucalyptus grandis and Dalbergia odorifera in Mixed Culture. PLANTS (BASEL, SWITZERLAND) 2024; 13:988. [PMID: 38611517 PMCID: PMC11013580 DOI: 10.3390/plants13070988] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Revised: 03/26/2024] [Accepted: 03/26/2024] [Indexed: 04/14/2024]
Abstract
Mixed cultivation with legumes may alleviate the nitrogen (N) limitation of monoculture Eucalyptus. However, how leaf functional traits respond to N in mixed cultivation with legumes and how they affect tree growth are unclear. Thus, this study investigated the response of leaf functional traits of Eucalyptus urophylla × Eucalyptus grandis (E. urophylla × E. grandis) and Dalbergia odorifera (D. odorifera) to mixed culture and N application, as well as the regulatory pathways of key traits on seedling growth. In this study, a pot-controlled experiment was set up, and seedling growth indicators, leaf physiology, morphological parameters, and N content were collected and analyzed after 180 days of N application treatment. The results indicated that mixed culture improved the N absorption and photosynthetic rate of E. urophylla × E. grandis, further promoting seedling growth but inhibiting the photosynthetic process of D. odorifera, reducing its growth and biomass. Redundancy analysis and path analysis revealed that leaf nitrogen content, pigment content, and photosynthesis-related physiological indicators were the traits most directly related to seedling growth and biomass accumulation, with the net photosynthetic rate explaining 50.9% and 55.8% of the variation in growth indicators for E. urophylla × E. grandis and D. odorifera, respectively. Additionally, leaf morphological traits are related to the trade-off strategy exhibited by E. urophylla × E. grandis and D. odorifera based on N competition. This study demonstrated that physiological traits related to photosynthesis are reliable predictors of N nutrition and tree growth in mixed stands, while leaf morphological traits reflect the resource trade-off strategies of different tree species.
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Affiliation(s)
- Han Zhang
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Yahui Lan
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Chenyang Jiang
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Yuhong Cui
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Yaqin He
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Jiazhen Deng
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Mingye Lin
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
| | - Shaoming Ye
- College of Forestry, Guangxi University, Nanning 530004, China; (H.Z.); (Y.L.); (C.J.); (Y.C.); (Y.H.); (J.D.); (M.L.)
- Guangxi Key Laboratory of Forest Ecology and Conservation, Guangxi University, Nanning 530004, China
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15
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Wei J, Zhou H, Shao X, Sun J, Ma L, Zhang Z, Qin R, Su H, Hu X, Chang T, Shi Z, Ade H, Wang H. Effects of short- and long-term plant functional group loss on alpine meadow community structure and soil nutrients. Ecol Evol 2024; 14:e10919. [PMID: 38476707 PMCID: PMC10928257 DOI: 10.1002/ece3.10919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2023] [Revised: 12/27/2023] [Accepted: 01/08/2024] [Indexed: 03/14/2024] Open
Abstract
The rapid loss of global biodiversity can greatly affect the normal functioning of ecosystems. However, how biodiversity losses affect plant community structure and soil nutrients is unclear. We conducted a field experiment to examine the short- and long-term effects of removing plant functional groups (Gramineae, Cyperaceae, legumes, and forbs) on the interrelationships among the species diversity, productivity, community structure, and soil nutrients in an alpine meadow ecosystem at Menyuan County, Qinghai Province. The variations in the species richness, above- and belowground biomass of the community gradually decreased over time. Species richness and productivity were positively correlated, and this correlation tended to be increasingly significant over time. Removal of the Cyperaceae, legumes, and other forbs resulted in fewer Gramineae species in the community. Soil total nitrogen, phosphorus, organic matter, and moisture contents increased significantly in the legume removal treatment. The removal of other forbs led to the lowest negative cohesion values, suggesting that this community may have difficulty recovering its previous equilibrium state within a short time. The effects of species removal on the ecosystem were likely influenced by the species structure and composition within the community. Changes in the number of Gramineae species indicated that they were more sensitive and less resistant to plant functional group removal. Legume removal may also indirectly cause distinct community responses through starvation and compensation effects. In summary, species loss at the community level led to extensive species niche shifts, which caused community resource redistribution and significant changes in community structure.
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Affiliation(s)
- Jingjing Wei
- College of Geographical ScienceQinghai Normal UniversityXiningChina
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
| | - Huakun Zhou
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- State Key Laboratory of Tibetan Plateau Earth System, Environment and Resources (TPESER), Institute of Tibetan Plateau ResearchChinese Academy of SciencesBeijingChina
| | | | - Jian Sun
- State Key Laboratory of Tibetan Plateau Earth System, Environment and Resources (TPESER), Institute of Tibetan Plateau ResearchChinese Academy of SciencesBeijingChina
| | - Li Ma
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
| | - Zhonghua Zhang
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
| | - Ruimin Qin
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- University of Chinese Academy of SciencesBeijingChina
| | - Hongye Su
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- University of Chinese Academy of SciencesBeijingChina
| | - Xue Hu
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- University of Chinese Academy of SciencesBeijingChina
| | - Tao Chang
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- University of Chinese Academy of SciencesBeijingChina
| | - Zhengchen Shi
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- University of Chinese Academy of SciencesBeijingChina
| | - Haze Ade
- Qinghai Provincial Key Laboratory of Restoration Ecology in Cold Regions, Northwest Institute of Plateau BiologyChinese Academy of SciencesXiningChina
- University of Chinese Academy of SciencesBeijingChina
| | - Huichun Wang
- College of Geographical ScienceQinghai Normal UniversityXiningChina
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16
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Ren W, Tian L, Querejeta JI. Tight coupling between leaf δ 13 C and N content along leaf ageing in the N 2 -fixing legume tree black locust (Robinia pseudoacacia L.). PHYSIOLOGIA PLANTARUM 2024; 176:e14235. [PMID: 38472162 DOI: 10.1111/ppl.14235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Revised: 01/29/2024] [Accepted: 02/08/2024] [Indexed: 03/14/2024]
Abstract
N2 -fixing legumes can strongly affect ecosystem functions by supplying nitrogen (N) and improving the carbon-fixing capacity of vegetation. Still, the question of how their leaf-level N status and carbon metabolism are coordinated along leaf ageing remains unexplored. Leaf tissue carbon isotopic composition (δ13 C) provides a useful indicator of time-integrated intrinsic water use efficiency (WUEi). Here, we quantified the seasonal changes of leaf δ13 C, N content on a mass and area basis (Nmass , Narea , respectively), Δ18 O (leaf 18 O enrichment above source water, a proxy of time-integrated stomatal conductance) and morphological traits in an emblematic N2 -fixing legume tree, the black locust (Robinia pseudoacacia L.), at a subtropical site in Southwest China. We also measured xylem, soil and rainwater isotopes (δ18 O, δ2 H) to characterize tree water uptake patterns. Xylem water isotopic data reveal that black locust primarily used shallow soil water in this humid habitat. Black locust exhibited a decreasing δ13 C along leaf ageing, which was largely driven by decreasing leaf Nmass , despite roughly constant Narea . In contrast, the decreasing δ13 C along leaf ageing was largely uncoupled from parallel increases in Δ18 O and leaf thickness. Leaf N content is used as a proxy of leaf photosynthetic capacity; thus, it plays a key role in determining the seasonality in δ13 C, whereas the roles of stomatal conductance and leaf morphology are minor. Black locust leaves can effectively adjust to changing environmental conditions along leaf ageing through LMA increases and moderate stomatal conductance reduction while maintaining constant Narea to optimize photosynthesis and carbon assimilation, despite declining leaf Nmass and δ13 C.
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Affiliation(s)
- Wei Ren
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, China
- Chongqing Key Laboratory of Karst Environment, School of Geographical Sciences, Southwest University, Chongqing, China
| | - Lide Tian
- Institute of International Rivers and Eco-Security, Yunnan University, Kunming, China
- Yunnan Key Laboratory of International Rivers and Transboundary Eco-security, Kunming, China
| | - José Ignacio Querejeta
- Centro de Edafología y Biología Aplicada del Segura, Consejo Superior de Investigaciones Científicas (CEBAS, CSIC), Murcia, Spain
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17
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Gionfriddo M, Rhodes T, Whitney SM. Perspectives on improving crop Rubisco by directed evolution. Semin Cell Dev Biol 2024; 155:37-47. [PMID: 37085353 DOI: 10.1016/j.semcdb.2023.04.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 04/14/2023] [Accepted: 04/15/2023] [Indexed: 04/23/2023]
Abstract
Rubisco catalyses the entry of almost all CO2 into the biosphere and is often the rate-limiting step in plant photosynthesis and growth. Its notoriety as the most abundant protein on Earth stems from the slow and error-prone catalytic properties that require plants, cyanobacteria, algae and photosynthetic bacteria to produce it in high amounts. Efforts to improve the CO2-fixing properties of plant Rubisco has been spurred on by the discovery of more effective isoforms in some algae with the potential to significantly improve crop productivity. Incompatibilities between the protein folding machinery of leaf and algae chloroplasts have, so far, prevented efforts to transplant these more effective Rubisco variants into plants. There is therefore increasing interest in improving Rubisco catalysis by directed (laboratory) evolution. Here we review the advances being made in, and the ongoing challenges with, improving the solubility and/or carboxylation activity of differing non-plant Rubisco lineages. We provide perspectives on new opportunities for the directed evolution of crop Rubiscos and the existing plant transformation capabilities available to evaluate the extent to which Rubisco activity improvements can benefit agricultural productivity.
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Affiliation(s)
- Matteo Gionfriddo
- Plant Science Division, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia; Department of Cellular Biochemistry, Max Planck Institute of Biochemistry, Martinsried 82152, Germany
| | - Timothy Rhodes
- Plant Science Division, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia
| | - Spencer M Whitney
- Plant Science Division, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia.
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18
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Tsujii Y, Atwell BJ, Lambers H, Wright IJ. Leaf phosphorus fractions vary with leaf economic traits among 35 Australian woody species. THE NEW PHYTOLOGIST 2024; 241:1985-1997. [PMID: 38189091 DOI: 10.1111/nph.19513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Accepted: 12/06/2023] [Indexed: 01/09/2024]
Abstract
Adaptations of plants to phosphorus (P) deficiency include reduced investment of leaf P in storage (orthophosphates in vacuoles), nucleic acids and membrane lipids. Yet, it is unclear how these adaptations are associated with plant ecological strategies. Five leaf P fractions (orthophosphate P, Pi ; metabolite P, PM ; nucleic acid P, PN ; lipid P, PL ; and residual P, PR ) were analysed alongside leaf economic traits among 35 Australian woody species from three habitats: one a high-P basalt-derived soil and two low-P sandstone-derived soils, one undisturbed and one disturbed by human activities with artificial P inputs. Species at the undisturbed low-P site generally exhibited lower concentrations of total leaf P ([Ptotal ]), primarily associated with lower concentrations of Pi , and PN . The relative allocation of P to each fraction varied little among sites, except that higher PL per [Ptotal ] (rPL ) was recorded at the undisturbed low-P site than at the high-P site. This higher rPL , reflecting relative allocation to membranes, was primarily associated with lower concentrations of leaf nitrogen at the undisturbed low-P site than at the high-P site. Associations between leaf P fractions and leaf nitrogen may provide a basis for understanding the variation in plant ecological strategies dependent on soil P availability.
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Affiliation(s)
- Yuki Tsujii
- Forestry and Forest Products Research Institute, Tsukuba, 305-8687, Japan
- Faculty of Science, Kyushu University, Fukuoka, 819-0395, Japan
- School of Natural Sciences, Macquarie University, Penrith, NSW, 2109, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Brian J Atwell
- School of Natural Sciences, Macquarie University, Penrith, NSW, 2109, Australia
| | - Hans Lambers
- School of Biological Sciences, The University of Western Australia, Perth, WA, 6009, Australia
| | - Ian J Wright
- School of Natural Sciences, Macquarie University, Penrith, NSW, 2109, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, 2751, Australia
- ARC Centre for Plant Success in Nature & Agriculture, Western Sydney University, Richmond, NSW, 2753, Australia
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19
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Wei X, Han L, Xu N, Sun M, Yang X. Nitrate nitrogen enhances the efficiency of photoprotection in Leymus chinensis under drought stress. FRONTIERS IN PLANT SCIENCE 2024; 15:1348925. [PMID: 38419774 PMCID: PMC10899514 DOI: 10.3389/fpls.2024.1348925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/03/2023] [Accepted: 01/30/2024] [Indexed: 03/02/2024]
Abstract
Introduction Global climate change exerts a significant impact on the nitrogen supply and photosynthesis ability in land-based plants. The photosynthetic capacity of dominant grassland species is important if we are to understand carbon cycling under climate change. Drought stress is one of the major factors limiting plant photosynthesis, and nitrogen (N) is an essential nutrient involved in the photosynthetic activity of leaves. The regulatory mechanisms responsible for the effects of ammonium (NH4 +) and nitrate (NO3 -) on the drought-induced photoinhibition of photosystem II (PSII) in plants have yet to be fully elucidated. Therefore, there is a significant need to gain a better understanding of the role of electron transport in the photoinhibition of PSII. Methods In the present study, we conducted experiments with normal watering (LD), severe drought (MD), and extreme drought (HD) treatments, along with no nitrogen (N0), ammonium (NH4), nitrate (NO3), and mixed nitrogen (NH4NO3) treatments. We analyzed pigment accumulation, reactive oxygen species (ROS) accumulation, photosynthetic enzyme activity, photosystem activity, electron transport, and O-J-I-P kinetics. Results Analysis showed that increased nitrate application significantly increased the leaf chlorophyll content per unit area (Chlarea) and nitrogen content per unit area (Narea) (p< 0.05). Under HD treatment, ROS levels were lower in NO3-treated plants than in N0 plants, and there was no significant difference in photosynthetic enzyme activity between plants treated with NO3 and NH4NO3. Under drought stress, the maximum photochemical efficiency of PSII (Fv/Fm), PSII electron transport rate (ETR), and effective quantum yield of PSII (φPSII) were significant higher in NO3-treated plants (p< 0.05). Importantly, the K-band and G-band were higher in NO3-treated plants. Discussion These results suggest that drought stress hindered the formation of NADPH and ATP in N0 and NH4-treated L. chinensis plants, thus damaging the donor side of the PSII oxygen-evolving complex (OEC). After applying nitrate, higher photosynthetic enzyme and antioxidant enzyme activity not only protected PSII from photodamage under drought stress but also reduced the rate of damage in PSII during the growth of L. chinensis growth under drought stress.
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Affiliation(s)
- Xiaowei Wei
- Jilin Provincial Key Laboratory for Plant Resources Science and Green Production, Jilin Normal University, Siping, China
| | - Lin Han
- Jilin Provincial Key Laboratory for Plant Resources Science and Green Production, Jilin Normal University, Siping, China
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, Heilongjiang, China
| | - Nan Xu
- Key Laboratory of Heilongjiang Province for Cold-Regions Wetlands Ecology and Environment Research, and School of Geography and Tourism, Harbin University, Harbin, China
| | - Mingyue Sun
- Jilin Provincial Key Laboratory for Plant Resources Science and Green Production, Jilin Normal University, Siping, China
| | - Xuechen Yang
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, Heilongjiang, China
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Luo M, Liu Y, Li J, Gao T, Wu S, Wu L, Lai X, Xu H, Hu H, Ma Y. Effects of Straw Returning and New Fertilizer Substitution on Rice Growth, Yield, and Soil Properties in the Chaohu Lake Region of China. PLANTS (BASEL, SWITZERLAND) 2024; 13:444. [PMID: 38337978 PMCID: PMC10857592 DOI: 10.3390/plants13030444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2024] [Revised: 01/27/2024] [Accepted: 01/28/2024] [Indexed: 02/12/2024]
Abstract
Recently, replacing chemical fertilizers with straw returning and new fertilizers has received considerable attention in the agricultural sector, as it is believed to increase rice yield and improve soil properties. However, less is known about rice growth and soil properties in paddy fields with the addition of different fertilizers. Thus, in this paper, we investigated the effects of different fertilizer treatments, including no fertilization (CK), optimized fertilization based on the medium yield recommended fertilizer amount (OF), 4.50 Mg ha-1 straw returning with chemical fertilizers (SF), 0.59 Mg ha-1 slow-release fertilizer with chemical fertilizers (SRF), and 0.60 Mg ha-1 water-soluble fertilizer with chemical fertilizers (WSF), on rice growth, yield, and soil properties through a field experiment. The results show that compared with the OF treatment, the new SF, SRF, and WSF treatments increased plant height, main root length, tiller number, leaf area index, chlorophyll content, and aboveground dry weight. The SF, SRF, and WSF treatments improved rice grain yield by 30.65-32.51% and 0.24-1.66% compared to the CK and OF treatments, respectively. The SRF treatment increased nitrogen (N) and phosphorus (P) uptake by 18.78% and 28.68%, the harvest indexes of N and P by 1.75% and 0.59%, and the partial productivity of N and P by 2.64% and 2.63%, respectively, compared with the OF treatment. However, fertilization did not significantly affect the average yield, harvest indexes of N and P, and partial productivity of N and P. The contents of TN, AN, SOM, TP, AP, and AK across all the treatments decreased significantly with increasing soil depth, while soil pH increased with soil depth. The SF treatment could more effectively increase soil pH and NH4+-N content compared to the SRF and WSF treatments, while the SRF treatment could greatly enhance other soil nutrients and enzyme activities compared to the SF and WSF treatments. A correlation analysis showed that rice yield was significantly positively associated with tiller number, leaf area index, chlorophyll, soil NO3--N, NH4+-N, SOM, TP, AK, and soil enzyme activity. The experimental results indicate that SRF was the best fertilization method to improve rice growth and yield and enhance soil properties, followed by the SF, WSF, and OF treatments. Hence, the results provide useful information for better fertilization management in the Chaohu Lake region of China.
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Affiliation(s)
- Mei Luo
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Ying Liu
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Jing Li
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Tingfeng Gao
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Sheng Wu
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Lei Wu
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Xijun Lai
- Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing 210008, China
| | - Hongjun Xu
- Station of Agricultural Environment Protection, Chaohu 238006, China
| | - Hongxiang Hu
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
| | - Youhua Ma
- College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China; (M.L.)
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21
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Keller B, Soto J, Steier A, Portilla-Benavides AE, Raatz B, Studer B, Walter A, Muller O, Urban MO. Linking photosynthesis and yield reveals a strategy to improve light use efficiency in a climbing bean breeding population. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:901-916. [PMID: 37878015 PMCID: PMC10837016 DOI: 10.1093/jxb/erad416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Accepted: 10/21/2023] [Indexed: 10/26/2023]
Abstract
Photosynthesis drives plant physiology, biomass accumulation, and yield. Photosynthetic efficiency, specifically the operating efficiency of PSII (Fq'/Fm'), is highly responsive to actual growth conditions, especially to fluctuating photosynthetic photon fluence rate (PPFR). Under field conditions, plants constantly balance energy uptake to optimize growth. The dynamic regulation complicates the quantification of cumulative photochemical energy uptake based on the intercepted solar energy, its transduction into biomass, and the identification of efficient breeding lines. Here, we show significant effects on biomass related to genetic variation in photosynthetic efficiency of 178 climbing bean (Phaseolus vulgaris L.) lines. Under fluctuating conditions, the Fq'/Fm' was monitored throughout the growing period using hand-held and automated chlorophyll fluorescence phenotyping. The seasonal response of Fq'/Fm' to PPFR (ResponseG:PPFR) achieved significant correlations with biomass and yield, ranging from 0.33 to 0.35 and from 0.22 to 0.31 in two glasshouse and three field trials, respectively. Phenomic yield prediction outperformed genomic predictions for new environments in four trials under different growing conditions. Investigating genetic control over photosynthesis, one single nucleotide polymorphism (Chr09_37766289_13052) on chromosome 9 was significantly associated with ResponseG:PPFR in proximity to a candidate gene controlling chloroplast thylakoid formation. In conclusion, photosynthetic screening facilitates and accelerates selection for high yield potential.
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Affiliation(s)
- Beat Keller
- Crop Science, Institute of Agricultural Sciences, ETH Zurich, Zurich, Switzerland
- Molecular Plant Breeding, Institute of Agricultural Sciences, ETH Zurich, Zurich, Switzerland
| | - Jonatan Soto
- Bean Program, Crops for nutrition and health, International Center for Tropical Agriculture (CIAT), Cali, Colombia
| | - Angelina Steier
- Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| | | | - Bodo Raatz
- Bean Program, Crops for nutrition and health, International Center for Tropical Agriculture (CIAT), Cali, Colombia
| | - Bruno Studer
- Molecular Plant Breeding, Institute of Agricultural Sciences, ETH Zurich, Zurich, Switzerland
| | - Achim Walter
- Crop Science, Institute of Agricultural Sciences, ETH Zurich, Zurich, Switzerland
| | - Onno Muller
- Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Milan O Urban
- Bean Program, Crops for nutrition and health, International Center for Tropical Agriculture (CIAT), Cali, Colombia
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22
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Wang Y, Zhang C, Xiao X, Wu H, Zhang J. Water-use strategies and functional traits explain divergent linkages in physiological responses to simulated precipitation change. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 908:168238. [PMID: 37939960 DOI: 10.1016/j.scitotenv.2023.168238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 10/14/2023] [Accepted: 10/29/2023] [Indexed: 11/10/2023]
Abstract
As a part of global climate change, precipitation patterns in arid regions will change significantly, and the different responses of desert plants to these changes will lead to alterations in community composition, thereby impacting ecosystem stability. Thus, understanding the mechanism underlying the associations among physiological response variables considering changing precipitation is crucial. Here, water-use strategies, functional traits, and physiological processes (e.g., photosynthesis (An), transpiration (Tr), leaf water potential (Ψl), stomatal conductance (gs), and soil respiration (Rs)) were measured in a precipitation experiment with two coexisting desert riparian species to determine how water-use strategies and functional traits operate together in generating physiological response mechanisms. The results showed that the two species exhibited divergent response pathways of physiological processes following rainfall events, although both were identified as isohydric plants with stringent stomatal regulation. For the shallow-rooted species N. sphaerocarpa, gs was sensitive to changes in both surface soil moisture (Swc) and Ψl, and Swc was the primary factor influencing Rs. These results were supported by the preference for shallow water and predominance of functional traits associated with drought avoidance. For the deep-rooted species R. soongorica, variations in gs were decoupled from Swc and directly influenced by enhanced Ψl, An was the main factor affecting Rs, while Ψl negatively affected Rs. These correlations could be attributed to the preference for deep water and functional traits associated with drought tolerance. These findings suggest that R. soongorica had a stronger tolerance to environmental water deficits and may expand extensively under drier climatic conditions in the future.
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Affiliation(s)
- Yang Wang
- College of Life Science and Technology, Inner Mongolia Normal University, Hohhot 010022, China; Key Laboratory of Biodiversity conservation and Sustainable utilization in Mongolian Plateau for College and University of Inner Mongolia Autonomous Region, Hohhot 010022, China.; Key Laboratory of Infinite-dimensional Hamiltonian System and Its Algorithm Application, Inner Mongolia Normal University, Hohhot 010022, China..
| | - Cicheng Zhang
- College of Geographic Science, Hunan Normal University, Changsha, China.
| | - Xiong Xiao
- College of Geographic Science, Hunan Normal University, Changsha, China.
| | - Huawu Wu
- Key Laboratory of Watershed Geographic Sciences, Nanjing Institute of Geography and Limnology Chinese Academy of Sciences, Nanjing 210008, China.
| | - Jinghui Zhang
- School of Ecology and Environment, Inner Mongolia University, Hohhot 010021, China.
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23
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Martins J, Neves M, Canhoto J. Drought-Stress-Induced Changes in Chloroplast Gene Expression in Two Contrasting Strawberry Tree ( Arbutus unedo L.) Genotypes. PLANTS (BASEL, SWITZERLAND) 2023; 12:4133. [PMID: 38140460 PMCID: PMC10747485 DOI: 10.3390/plants12244133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2023] [Revised: 12/04/2023] [Accepted: 12/08/2023] [Indexed: 12/24/2023]
Abstract
This study investigated the effect of drought stress on the expression of chloroplast genes in two different genotypes (A1 and A4) of strawberry tree plants with contrasting performances. Two-year-old plants were subjected to drought (20 days at 18% field capacity), and the photosynthetic activity, chlorophyll content, and expression levels of 16 chloroplast genes involved in photosynthesis and metabolism-related enzymes were analyzed. Genotype-specific responses were prominent, with A1 displaying wilting and leaf curling, contrasting with the mild symptoms observed in A4. Quantification of damage using the net CO2 assimilation rates and chlorophyll content unveiled a significant reduction in A1, while A4 maintained stability. Gene expression analysis revealed substantial downregulation of A1 (15 out of 16 genes) and upregulation of A4 (14 out of 16 genes). Notably, psbC was downregulated in A1, while it was prominently upregulated in A4. Principal Component Analysis (PCA) highlighted genotype-specific clusters, emphasizing distinct responses under stress, whereas a correlation analysis elucidated intricate relationships between gene expression, net CO2 assimilation, and chlorophyll content. Particularly, a positive correlation with psaB, whereas a negative correlation with psbC was found in genotype A1. Regression analysis identified potential predictors for net CO2 assimilation, in particular psaB. These findings contribute valuable insights for future strategies targeting crop enhancement and stress resilience, highlighting the central role of chloroplasts in orchestrating plant responses to environmental stressors, and may contribute to the development of drought-tolerant plant varieties, which are essential for sustaining agriculture in regions affected by water scarcity.
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Affiliation(s)
- João Martins
- Centre for Functional Ecology, Associate Laboratory TERRA, Department of Life Sciences, University of Coimbra, Calçada Martim de Freitas, 3000-456 Coimbra, Portugal; (M.N.); (J.C.)
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24
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Yan T, Wang L, Wang P, Zhong T. Stability in the leaf functional traits of understory herbaceous species after 12-yr of nitrogen addition in temperate larch plantations. FRONTIERS IN PLANT SCIENCE 2023; 14:1282884. [PMID: 38116147 PMCID: PMC10728480 DOI: 10.3389/fpls.2023.1282884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 11/20/2023] [Indexed: 12/21/2023]
Abstract
Leaf functional traits play critical roles in plant functioning. Although the functional traits of overstory trees have been extensively studied, minimal research has been conducted regarding understory species, despite the understory layer is an important component of temperate forests. Such insufficiency limit the broader understanding of processes and functions in forest ecosystems, particularly when under the increasing atmospheric nitrogen (N) deposition. Here, we investigated the responses of 18 leaf functional traits in six understory herbaceous species within young and mature stands (three species per stand) in larch (Larix principis-rupprechtii) plantations that subjected to 12 years of anthropogenic N addition. We found that N addition did not significantly impact the photosynthetic traits of understory herbaceous species in either stand; it only led to increased chlorophyll content in Geum aleppicum Jacq. Similarly, with the exception of decreases in the predawn leaf water potential of Sanguisorba officinalis L., N addition did not significantly affect leaf hydraulic traits. With the exception of changes to adaxial epidermis thickness in Potentilla chinensis Ser. (decreased) and G. aleppicum (increased), N addition had negligible effects on leaf anatomical traits and specific leaf area, however, interspecific variations in the plasticity of leaf anatomical traits were observed. Stable responses to N addition were also observed for nonstructural carbohydrates (NSC) and their components (soluble sugars and starch), with the exception of Polygonum divaricatum L., which exhibited increases in NSC. Overall, our results suggest that the functional traits of understory herbaceous species exhibit stability under conditions of long-term N enrichment in temperate plantations.
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Affiliation(s)
- Tao Yan
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
- Qingyuan Forest CERN, National Observation and Research Station, Shenyang, China
| | - Liying Wang
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
| | - Peilin Wang
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
| | - Tianyu Zhong
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
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25
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Han K, Zhao Y, Sun Y, Li Y. NACs, generalist in plant life. PLANT BIOTECHNOLOGY JOURNAL 2023; 21:2433-2457. [PMID: 37623750 PMCID: PMC10651149 DOI: 10.1111/pbi.14161] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 07/24/2023] [Accepted: 08/01/2023] [Indexed: 08/26/2023]
Abstract
Plant-specific NAC proteins constitute a major transcription factor family that is well-known for its roles in plant growth, development, and responses to abiotic and biotic stresses. In recent years, there has been significant progress in understanding the functions of NAC proteins. NAC proteins have a highly conserved DNA-binding domain; however, their functions are diverse. Previous understanding of the structure of NAC transcription factors can be used as the basis for their functional diversity. NAC transcription factors consist of a target-binding domain at the N-terminus and a highly versatile C-terminal domain that interacts with other proteins. A growing body of research on NAC transcription factors helps us comprehend the intricate signalling network and transcriptional reprogramming facilitated by NAC-mediated complexes. However, most studies of NAC proteins have been limited to a single function. Here, we discuss the upstream regulators, regulatory components and targets of NAC in the context of their prospective roles in plant improvement strategies via biotechnology intervention, highlighting the importance of the NAC transcription factor family in plants and the need for further research.
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Affiliation(s)
- Kunjin Han
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Ye Zhao
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Yuhan Sun
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
| | - Yun Li
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Research Center of Tree Breeding and Ecological Restoration, College of Biological Sciences and TechnologyBeijing Forestry UniversityBeijingChina
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26
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Li R, Chen S, Matsumoto H, Gouda M, Gafforov Y, Wang M, Liu Y. Predicting rice diseases using advanced technologies at different scales: present status and future perspectives. ABIOTECH 2023; 4:359-371. [PMID: 38106429 PMCID: PMC10721578 DOI: 10.1007/s42994-023-00126-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 10/30/2023] [Indexed: 12/19/2023]
Abstract
The past few years have witnessed significant progress in emerging disease detection techniques for accurately and rapidly tracking rice diseases and predicting potential solutions. In this review we focus on image processing techniques using machine learning (ML) and deep learning (DL) models related to multi-scale rice diseases. Furthermore, we summarize applications of different detection techniques, including genomic, physiological, and biochemical approaches. In addition, we also present the state-of-the-art in contemporary optical sensing applications of pathogen-plant interaction phenotypes. This review serves as a valuable resource for researchers seeking effective solutions to address the challenges of high-throughput data and model recognition for early detection of issues affecting rice crops through ML and DL models.
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Affiliation(s)
- Ruyue Li
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058 China
- College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, 310058 China
| | - Sishi Chen
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058 China
| | - Haruna Matsumoto
- State Key Laboratory of Rice Biology, and Ministry of Agricultural and Rural Affairs Laboratory of Molecular Biology of Crop Pathogens and Insects, Zhejiang University, Hangzhou, 310058 China
| | - Mostafa Gouda
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058 China
- Department of Nutrition and Food Science, National Research Centre, Giza, 12622 Egypt
| | - Yusufjon Gafforov
- Central Asian Center for Development Studies, New Uzbekistan University, Tashkent, 100000 Uzbekistan
| | - Mengcen Wang
- State Key Laboratory of Rice Biology, and Ministry of Agricultural and Rural Affairs Laboratory of Molecular Biology of Crop Pathogens and Insects, Zhejiang University, Hangzhou, 310058 China
- Global Education Program for AgriScience Frontiers, Graduate School of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Yufei Liu
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058 China
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27
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Lamour J, Souza DC, Gimenez BO, Higuchi N, Chave J, Chambers J, Rogers A. Wood-density has no effect on stomatal control of leaf-level water use efficiency in an Amazonian forest. PLANT, CELL & ENVIRONMENT 2023; 46:3806-3821. [PMID: 37635450 DOI: 10.1111/pce.14704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 07/20/2023] [Accepted: 08/16/2023] [Indexed: 08/29/2023]
Abstract
Forest disturbances increase the proportion of fast-growing tree species compared to slow-growing ones. To understand their relative capacity for carbon uptake and their vulnerability to climate change, and to represent those differences in Earth system models, it is necessary to characterise the physiological differences in their leaf-level control of water use efficiency and carbon assimilation. We used wood density as a proxy for the fast-slow growth spectrum and tested the assumption that trees with a low wood density (LWD) have a lower water-use efficiency than trees with a high wood density (HWD). We selected 5 LWD tree species and 5 HWD tree species growing in the same location in an Amazonian tropical forest and measured in situ steady-state gas exchange on top-of-canopy leaves with parallel sampling and measurement of leaf mass area and leaf nitrogen content. We found that LWD species invested more nitrogen in photosynthetic capacity than HWD species, had higher photosynthetic rates and higher stomatal conductance. However, contrary to expectations, we showed that the stomatal control of the balance between transpiration and carbon assimilation was similar in LWD and HWD species and that they had the same dark respiration rates.
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Affiliation(s)
- Julien Lamour
- Department of Environmental & Climate Sciences, Brookhaven National Laboratory, Upton, New York, USA
- Evolution and Biological Diversity (EDB), CNRS/IRD/UPS, Toulouse, France
| | - Daisy C Souza
- National Institute of Amazonian Research (INPA), Forest Management Laboratory (LMF), Manaus, Amazonas, Brazil
| | - Bruno O Gimenez
- National Institute of Amazonian Research (INPA), Forest Management Laboratory (LMF), Manaus, Amazonas, Brazil
- Department of Geography, University of California, Berkeley, California, USA
| | - Niro Higuchi
- National Institute of Amazonian Research (INPA), Forest Management Laboratory (LMF), Manaus, Amazonas, Brazil
| | - Jérôme Chave
- Evolution and Biological Diversity (EDB), CNRS/IRD/UPS, Toulouse, France
| | - Jeffrey Chambers
- Department of Geography, University of California, Berkeley, California, USA
| | - Alistair Rogers
- Department of Environmental & Climate Sciences, Brookhaven National Laboratory, Upton, New York, USA
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28
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Liu X, Qiao Y, Zhou W, Dong W, Gu L. Determinants of photochemical characteristics of the photosynthetic electron transport chain of maize. FRONTIERS IN PLANT SCIENCE 2023; 14:1279963. [PMID: 38053761 PMCID: PMC10694277 DOI: 10.3389/fpls.2023.1279963] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/19/2023] [Accepted: 10/25/2023] [Indexed: 12/07/2023]
Abstract
Introduction The photosynthetic electron transport chain (ETC) is the bridge that links energy harvesting during the photophysical reactions at one end and energy consumption during the biochemical reactions at the other. Its functioning is thus fundamental for the proper balance between energy supply and demand in photosynthesis. Currently, there is a lack of understanding regarding how the structural properties of the ETC are affected by nutrient availability and plant developmental stages, which is a major roadblock to comprehensive modeling of photosynthesis. Methods Redox parameters reflect the structural controls of ETC on the photochemical reactions and electron transport. We conducted joint measurements of chlorophyll fluorescence (ChlF) and gas exchange under systematically varying environmental conditions and growth stages of maize and sampled foliar nutrient contents. We utilized the recently developed steady-state photochemical model to infer redox parameters of electron transport from these measurements. Results and discussion We found that the inferred values of these photochemical redox parameters varied with leaf macronutrient content. These variations may be caused either directly by these nutrients being components of protein complexes on the ETC or indirectly by their impacts on the structural integrity of the thylakoid and feedback from the biochemical reactions. Also, the redox parameters varied with plant morphology and developmental stage, reflecting seasonal changes in the structural properties of the ETC. Our findings will facilitate the parameterization and simulation of complete models of photosynthesis.
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Affiliation(s)
- Xiuping Liu
- Key Laboratory of Agricultural Water Resources, Hebei Key Laboratory of Soil Ecology, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang, China
| | - Yunzhou Qiao
- Key Laboratory of Agricultural Water Resources, Hebei Key Laboratory of Soil Ecology, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang, China
| | - Wangming Zhou
- School of Life Sciences, Anqing Normal University, Anqing, China
| | - Wenxu Dong
- Key Laboratory of Agricultural Water Resources, Hebei Key Laboratory of Soil Ecology, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang, China
| | - Lianhong Gu
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN, United States
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An YQ, Ma DJ, Xi Z. Multi-Omics Analysis Reveals Synergistic Enhancement of Nitrogen Assimilation Efficiency via Coordinated Regulation of Nitrogen and Carbon Metabolism by Co-Application of Brassinolide and Pyraclostrobin in Arabidopsis thaliana. Int J Mol Sci 2023; 24:16435. [PMID: 38003624 PMCID: PMC10671621 DOI: 10.3390/ijms242216435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 11/13/2023] [Accepted: 11/15/2023] [Indexed: 11/26/2023] Open
Abstract
Improving nitrogen (N) assimilation efficiency without yield penalties is important to sustainable food security. The chemical regulation approach of N assimilation efficiency is still less explored. We previously found that the co-application of brassinolide (BL) and pyraclostrobin (Pyr) synergistically boosted biomass and yield via regulating photosynthesis in Arabidopsis thaliana. However, the synergistic effect of BL and Pyr on N metabolism remains unclear. In this work, we examined the N and protein contents, key N assimilatory enzyme activities, and transcriptomic and metabolomic changes in the four treatments (untreated, BL, Pyr, and BL + Pyr). Our results showed that BL + Pyr treatment synergistically improved N and protein contents by 56.2% and 58.0%, exceeding the effects of individual BL (no increase) or Pyr treatment (36.4% and 36.1%). Besides synergistically increasing the activity of NR (354%), NiR (42%), GS (62%), and GOGAT (62%), the BL + Pyr treatment uniquely coordinated N metabolism, carbon utilization, and photosynthesis at the transcriptional and metabolic levels, outperforming the effects of individual BL or Pyr treatments. These results revealed that BL + Pyr treatments could synergistically improve N assimilation efficiency through improving N assimilatory enzyme activities and coordinated regulation of N and carbon metabolism. The identified genes and metabolites also informed potential targets and agrochemical combinations to enhance N assimilation efficiency.
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Affiliation(s)
- Ya-Qi An
- State Key Laboratory of Elemento-Organic Chemistry, Department of Chemical Biology, National Pesticide Engineering Research Center, College of Chemistry, Nankai University, Tianjin 300071, China; (Y.-Q.A.); (D.-J.M.)
| | - De-Jun Ma
- State Key Laboratory of Elemento-Organic Chemistry, Department of Chemical Biology, National Pesticide Engineering Research Center, College of Chemistry, Nankai University, Tianjin 300071, China; (Y.-Q.A.); (D.-J.M.)
| | - Zhen Xi
- State Key Laboratory of Elemento-Organic Chemistry, Department of Chemical Biology, National Pesticide Engineering Research Center, College of Chemistry, Nankai University, Tianjin 300071, China; (Y.-Q.A.); (D.-J.M.)
- Frontiers Science Center for New Organic Matter, Nankai University, Tianjin 300071, China
- Collaborative Innovation Center of Chemical Science and Engineering, Tianjin 300071, China
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Miraglio T, Coops NC, Wallis CIB, Crofts AL, Kalacska M, Vellend M, Serbin SP, Arroyo-Mora JP, Laliberté E. Mapping canopy traits over Québec using airborne and spaceborne imaging spectroscopy. Sci Rep 2023; 13:17179. [PMID: 37821515 PMCID: PMC10567784 DOI: 10.1038/s41598-023-44384-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Accepted: 10/07/2023] [Indexed: 10/13/2023] Open
Abstract
The advent of new spaceborne imaging spectrometers offers new opportunities for ecologists to map vegetation traits at global scales. However, to date most imaging spectroscopy studies exploiting satellite spectrometers have been constrained to the landscape scale. In this paper we present a new method to map vegetation traits at the landscape scale and upscale trait maps to the continental level, using historical spaceborne imaging spectroscopy (Hyperion) to derive estimates of leaf mass per area, nitrogen, and carbon concentrations of forests in Québec, Canada. We compare estimates for each species with reference field values and obtain good agreement both at the landscape and continental scales, with patterns consistent with the leaf economic spectrum. By exploiting the Hyperion satellite archive to map these traits and successfully upscale the estimates to the continental scale, we demonstrate the great potential of recent and upcoming spaceborne spectrometers to benefit plant biodiversity monitoring and conservation efforts.
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Affiliation(s)
- Thomas Miraglio
- Integrated Remote Sensing Studio, Department of Forest Resources Management, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada.
| | - Nicholas C Coops
- Integrated Remote Sensing Studio, Department of Forest Resources Management, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada
| | | | - Anna L Crofts
- Département de Biologie, Université de Sherbrooke, Sherbrooke, QC, Canada
| | - Margaret Kalacska
- Applied Remote Sensing Lab, Department of Geography, McGill University, Montréal, QC, H3A 0G4, Canada
| | - Mark Vellend
- Département de Biologie, Université de Sherbrooke, Sherbrooke, QC, Canada
| | - Shawn P Serbin
- Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Juan Pablo Arroyo-Mora
- Flight Research Laboratory, National Research Council of Canada, Ottawa, ON, K1A 0R6, Canada
| | - Etienne Laliberté
- Département de Sciences Biologiques, Institut de Recherche en Biologie Végétale, Université de Montréal, Montréal, QC, H3A 0G4, Canada
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Li Y, Zhang P, Sheng W, Zhang Z, Rose RJ, Song Y. Securing maize reproductive success under drought stress by harnessing CO 2 fertilization for greater productivity. FRONTIERS IN PLANT SCIENCE 2023; 14:1221095. [PMID: 37860252 PMCID: PMC10582713 DOI: 10.3389/fpls.2023.1221095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 09/19/2023] [Indexed: 10/21/2023]
Abstract
Securing maize grain yield is crucial to meet food and energy needs for the future growing population, especially under frequent drought events and elevated CO2 (eCO2) due to climate change. To maximize the kernel setting rate under drought stress is a key strategy in battling against the negative impacts. Firstly, we summarize the major limitations to leaf source and kernel sink in maize under drought stress, and identified that loss in grain yield is mainly attributed to reduced kernel set. Reproductive drought tolerance can be realized by collective contribution with a greater assimilate import into ear, more available sugars for ovary and silk use, and higher capacity to remobilize assimilate reserve. As such, utilization of CO2 fertilization by improved photosynthesis and greater reserve remobilization is a key strategy for coping with drought stress under climate change condition. We propose that optimizing planting methods and mining natural genetic variation still need to be done continuously, meanwhile, by virtue of advanced genetic engineering and plant phenomics tools, the breeding program of higher photosynthetic efficiency maize varieties adapted to eCO2 can be accelerated. Consequently, stabilizing maize production under drought stress can be achieved by securing reproductive success by harnessing CO2 fertilization.
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Affiliation(s)
- Yangyang Li
- College of Agronomy, Anhui Agricultural University, Hefei, Anhui, China
| | - Pengpeng Zhang
- College of Agronomy, Anhui Agricultural University, Hefei, Anhui, China
| | - Wenjing Sheng
- College of Agronomy, Anhui Agricultural University, Hefei, Anhui, China
| | - Zixiang Zhang
- College of Agronomy, Anhui Agricultural University, Hefei, Anhui, China
| | - Ray J. Rose
- School of Environmental and Life Sciences, The University of Newcastle, Newcastle, NSW, Australia
| | - Youhong Song
- College of Agronomy, Anhui Agricultural University, Hefei, Anhui, China
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD, Australia
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32
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Song Y, Wan GY, Wang JX, Zhang ZS, Xia JQ, Sun LQ, Lu J, Ma CX, Yu LH, Xiang CB, Wu J. Balanced nitrogen-iron sufficiency boosts grain yield and nitrogen use efficiency by promoting tillering. MOLECULAR PLANT 2023; 16:1661-1677. [PMID: 37674316 DOI: 10.1016/j.molp.2023.09.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Revised: 08/19/2023] [Accepted: 09/04/2023] [Indexed: 09/08/2023]
Abstract
Crop yield plays a critical role in global food security. For optimal plant growth and maximal crop yields, nutrients must be balanced. However, the potential significance of balanced nitrogen-iron (N-Fe) for improving crop yield and nitrogen use efficiency (NUE) has not previously been addressed. Here, we show that balanced N-Fe sufficiency significantly increases tiller number and boosts yield and NUE in rice and wheat. NIN-like protein 4 (OsNLP4) plays a pivotal role in maintaining the N-Fe balance by coordinately regulating the expression of multiple genes involved in N and Fe metabolism and signaling. OsNLP4 also suppresses OsD3 expression and strigolactone (SL) signaling, thereby promoting tillering. Balanced N-Fe sufficiency promotes the nuclear localization of OsNLP4 by reducing H2O2 levels, reinforcing the functions of OsNLP4. Interestingly, we found that OsNLP4 upregulates the expression of a set of H2O2-scavenging genes to promote its own accumulation in the nucleus. Furthermore, we demonstrated that foliar spraying of balanced N-Fe fertilizer at the tillering stage can effectively increase tiller number, yield, and NUE of both rice and wheat in the field. Collectively, these findings reveal the previously unrecognized effects of N-Fe balance on grain yield and NUE as well as the molecular mechanism by which the OsNLP4-OsD3 module integrates N-Fe nutrient signals to downregulate SL signaling and thereby promote rice tillering. Our study sheds light on how N-Fe nutrient signals modulate rice tillering and provide potential innovative approaches that improve crop yield with reduced N fertilizer input for benefitting sustainable agriculture worldwide.
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Affiliation(s)
- Ying Song
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China
| | - Guang-Yu Wan
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China
| | - Jing-Xian Wang
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China
| | - Zi-Sheng Zhang
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China
| | - Jin-Qiu Xia
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China
| | - Liang-Qi Sun
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China
| | - Jie Lu
- School of Agronomy, Anhui Agricultural University, Hefei, Anhui Province 230036, China
| | - Chuan-Xi Ma
- School of Agronomy, Anhui Agricultural University, Hefei, Anhui Province 230036, China
| | - Lin-Hui Yu
- State Key Laboratory of Crop Stress Biology for Arid Areas and Institute of Future Agriculture, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Cheng-Bin Xiang
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China.
| | - Jie Wu
- Division of Life Sciences and Medicine, Division of Molecular & Cell Biophysics, Hefei National Science Center for Interdisciplinary Sciences at the Microscale, MOE Key Laboratory for Membraneless Organelles and Cellular Dynamics, University of Science and Technology of China, The Innovation Academy of Seed Design, Chinese Academy of Sciences, Hefei, Anhui Province 230027, China.
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33
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Mohd-Radzman NA, Drapek C. Compartmentalisation: A strategy for optimising symbiosis and tradeoff management. PLANT, CELL & ENVIRONMENT 2023; 46:2998-3011. [PMID: 36717758 DOI: 10.1111/pce.14553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 01/19/2023] [Accepted: 01/26/2023] [Indexed: 06/18/2023]
Abstract
Plant root architecture is developmentally plastic in response to fluctuating nutrient levels in the soil. Part of this developmental plasticity is the formation of dedicated root cells and organs to host mutualistic symbionts. Structures like nitrogen-fixing nodules serve as alternative nutrient acquisition strategies during starvation conditions. Some root systems can also form myconodules-globular root structures that can host mycorrhizal fungi. The myconodule association is different from the wide-spread arbuscular mycorrhization. This range of symbiotic associations provides different degrees of compartmentalisation, from the cellular to organ scale, which allows the plant host to regulate the entry and extent of symbiotic interactions. In this review, we discuss the degrees of symbiont compartmentalisation by the plant host as a developmental strategy and speculate how spatial confinement mitigates risks associated with root symbiosis.
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Affiliation(s)
| | - Colleen Drapek
- Sainsbury Laboratory Cambridge University (SLCU), Bateman Street, Cambridge, UK
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34
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Davidson KJ, Lamour J, McPherran A, Rogers A, Serbin SP. Seasonal trends in leaf-level photosynthetic capacity and water use efficiency in a North American Eastern deciduous forest and their impact on canopy-scale gas exchange. THE NEW PHYTOLOGIST 2023; 240:138-156. [PMID: 37475146 DOI: 10.1111/nph.19137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Accepted: 06/24/2023] [Indexed: 07/22/2023]
Abstract
Vegetative transpiration (E) and photosynthetic carbon assimilation (A) are known to be seasonally dynamic, with changes in their ratio determining the marginal water use efficiency (WUE). Despite an understanding that stomata play a mechanistic role in regulating WUE, it is still unclear how stomatal and nonstomatal processes influence change in WUE over the course of the growing season. As a result, limited understanding of the primary physiological drivers of seasonal dynamics of canopy WUE remains one of the largest uncertainties in earth system model projections of carbon and water exchange in temperate deciduous forest ecosystems. We investigated seasonal patterns in leaf-level physiological, hydraulic, and anatomical properties, including the seasonal progress of the stomatal slope parameter (g1 ; inversely proportional to WUE) and the maximum carboxylation rate (Vcmax ). Vcmax and g1 were seasonally variable; however, their patterns were not temporally synchronized. g1 generally showed an increasing trend until late in the season, while Vcmax peaked during the midsummer months. Seasonal progression of Vcmax was primarily driven by changes in leaf structural, and anatomical characteristics, while seasonal changes in g1 were most strongly related to changes in Vcmax and leaf hydraulics. Using a seasonally variable Vcmax and g1 to parameterize a canopy-scale gas exchange model increased seasonally aggregated A and E by 3% and 16%, respectively.
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Affiliation(s)
- Kenneth J Davidson
- Department of Environmental and Climate Sciences, Brookhaven National Laboratory, Upton, NY, 11973, USA
- Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY, 11794, USA
| | - Julien Lamour
- Department of Environmental and Climate Sciences, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Anna McPherran
- Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY, 11794, USA
| | - Alistair Rogers
- Department of Environmental and Climate Sciences, Brookhaven National Laboratory, Upton, NY, 11973, USA
| | - Shawn P Serbin
- Department of Environmental and Climate Sciences, Brookhaven National Laboratory, Upton, NY, 11973, USA
- Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY, 11794, USA
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35
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García-López JV, Redondo-Gómez S, Flores-Duarte NJ, Zunzunegui M, Rodríguez-Llorente ID, Pajuelo E, Mateos-Naranjo E. Exploring through the use of physiological and isotopic techniques the potential of a PGPR-based biofertilizer to improve nitrogen fertilization practices efficiency in strawberry cultivation. FRONTIERS IN PLANT SCIENCE 2023; 14:1243509. [PMID: 37780506 PMCID: PMC10540466 DOI: 10.3389/fpls.2023.1243509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Accepted: 08/28/2023] [Indexed: 10/03/2023]
Abstract
The use of microorganisms as a biofertilizer in strawberry has focused mainly on pathogen biocontrol, which has led to the underestimation of the potential of microorganisms for the improvement of nutritional efficiency in this crop. A study was established to investigate the impact of a plant growth-promoting rhizobacteria (PGPR) based biofertilizer integrated by self-compatible stress tolerant strains with multiple PGP properties, including atmospheric nitrogen fixation, on strawberry (Fragaria × ananassa cv. Rociera) tolerance to N deficiency in terms of growth and physiological performance. After 40 days of nitrogen fertilization shortage, inoculated plants were able to maintain root development and fertility structures (i.e. fruits and flowers) at a level similar to plants properly fertilized. In addition, inoculation lessened the negative impact of nitrogen deficiency on leaves' dry weight and relative water content. This effect was mediated by a higher root/shoot ratio, which would have allowed them to explore larger volumes of soil for the acquisition of water. Moreover, inoculation was able to buffer up to 50% of the reduction in carbon assimilation capacity, due to its positive effect on the diffusion efficiency of CO2 and the biochemical capacity of photosynthesis, as well as on the activity of photosystem II light harvesting. Furthermore, the higher leaf C/N ratio and the maintained δ15N values close to control plants were related to positive bacterial effects at the level of the plant nutritional balance. Despite these positive effects, the application of the bacterial inoculum was unable to completely counteract the restriction of fertilization, being necessary to apply a certain amount of synthetic fertilizer for the strawberry nutrition. However, according to our results, the complementary effect of this PGPR-based biofertilizer could provide a higher efficiency in environmental and economic yields on this crop.
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Affiliation(s)
- Jesús V. García-López
- Servicio General de Invernadero, Centro de Investigación, Tecnología e Innovación de la Universidad de Sevilla (CITIUS), Seville, Spain
| | - Susana Redondo-Gómez
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Seville, Spain
| | - Noris J. Flores-Duarte
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, Seville, Spain
| | - María Zunzunegui
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Seville, Spain
| | | | - Eloísa Pajuelo
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, Seville, Spain
| | - Enrique Mateos-Naranjo
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Seville, Spain
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36
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Waring EF, Perkowski EA, Smith NG. Soil nitrogen fertilization reduces relative leaf nitrogen allocation to photosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:5166-5180. [PMID: 37235800 DOI: 10.1093/jxb/erad195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Accepted: 05/25/2023] [Indexed: 05/28/2023]
Abstract
The connection between soil nitrogen availability, leaf nitrogen, and photosynthetic capacity is not perfectly understood. Because these three components tend to be positively related over large spatial scales, some posit that soil nitrogen positively drives leaf nitrogen, which positively drives photosynthetic capacity. Alternatively, others posit that photosynthetic capacity is primarily driven by above-ground conditions. Here, we examined the physiological responses of a non-nitrogen-fixing plant (Gossypium hirsutum) and a nitrogen-fixing plant (Glycine max) in a fully factorial combination of light by soil nitrogen availability to help reconcile these competing hypotheses. Soil nitrogen stimulated leaf nitrogen in both species, but the relative proportion of leaf nitrogen used for photosynthetic processes was reduced under elevated soil nitrogen in all light availability treatments due to greater increases in leaf nitrogen content than chlorophyll and leaf biochemical process rates. Leaf nitrogen content and biochemical process rates in G. hirsutum were more responsive to changes in soil nitrogen than those in G. max, probably due to strong G. max investments in root nodulation under low soil nitrogen. Nonetheless, whole-plant growth was significantly enhanced by increased soil nitrogen in both species. Light availability consistently increased relative leaf nitrogen allocation to leaf photosynthesis and whole-plant growth, a pattern that was similar between species. These results suggest that the leaf nitrogen-photosynthesis relationship varies under different soil nitrogen levels and that these species preferentially allocated more nitrogen to plant growth and non-photosynthetic leaf processes, rather than photosynthesis, as soil nitrogen increased.
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Affiliation(s)
- Elizabeth F Waring
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, USA
- Department of Natural Sciences, Northeastern State University, Tahlequah, OK, USA
| | - Evan A Perkowski
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, USA
| | - Nicholas G Smith
- Department of Biological Sciences, Texas Tech University, Lubbock, TX, USA
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Dag A, Badichi S, Ben-Gal A, Perry A, Tel-Zur N, Ron Y, Tietel Z, Yermiyahu U. Optimizing Nitrogen Application for Jojoba under Intensive Cultivation. PLANTS (BASEL, SWITZERLAND) 2023; 12:3132. [PMID: 37687378 PMCID: PMC10489925 DOI: 10.3390/plants12173132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2023] [Revised: 08/29/2023] [Accepted: 08/30/2023] [Indexed: 09/10/2023]
Abstract
Although jojoba (Simmondsia chinensis) has been cultivated for years, information on its N requirements is limited. A 6-year study of mature jojoba plants grown under field conditions with an intensive management regime evaluated the effect of N application rate on plant nutrient status, growth, and productivity, and nitrate accumulation in the soil. Five levels of N application were tested: 50, 150, 250, 370, and 500 kg N ha-1. Fertilizers were provided throughout the growing season via a subsurface drip irrigation system. Leaf N concentration, in both spring and summer, reflected the level of N applied. A diagnostic leaf (youngest leaf that has reached full size) concentration of 1.3% N was identified as the threshold for N deficiency. Increasing rates of N application resulted in higher P levels in young leaves. Plant K status, as reflected in the leaf analysis, was not affected by N treatment but was strongly affected by fruit load. Vegetative growth was inhibited when only 50 kg N ha-1 was applied. Soil analysis at the end of the fertilization season showed substantial accumulation of nitrate for the two highest application rates. Considering productivity, N costs, and environmental risk, 150 kg N ha-1 is the recommended dosage for intensively grown jojoba. N deficiencies can be identified using leaf analysis, and excess N can be detected via soil sampling toward the end of the growing season. These results and tools will facilitate precise N fertilization in intensive jojoba plantations.
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Affiliation(s)
- Arnon Dag
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
| | - Shamir Badichi
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
- The R.H. Smith Institute of Plant Science and Genetics in Agriculture, Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot 7610000, Israel
| | - Alon Ben-Gal
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
| | - Aviad Perry
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Sede Boqer Campus, Ben-Gurion University of the Negev, Sede Boker 8499000, Israel
| | - Noemi Tel-Zur
- French Associates Institute for Agriculture and Biotechnology of Dryland, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Sede Boker 8499000, Israel;
| | - Yonatan Ron
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
| | - Zipora Tietel
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
| | - Uri Yermiyahu
- Gilat Research Center, Agricultural Research Organization, Volcani Institute, Rishon LeTsiyon 8528000, Israel; (S.B.); (A.B.-G.); (A.P.); (Y.R.); (Z.T.); (U.Y.)
- The R.H. Smith Institute of Plant Science and Genetics in Agriculture, Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot 7610000, Israel
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38
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Hu W, Gu H, Wang K, Lu Z, Li X, Cong R, Ren T, Lu J. Potassium deficiency stress reduces Rubisco activity in Brassica napus leaves by subcellular acidification decreasing photosynthetic rate. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 201:107912. [PMID: 37523826 DOI: 10.1016/j.plaphy.2023.107912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 07/17/2023] [Accepted: 07/24/2023] [Indexed: 08/02/2023]
Abstract
Under potassium (K) deficiency photosynthetic carboxylation capacities are limited, affecting the photosynthetic rate of plants. However, it is not clear how ionic K within plants regulates carboxylation capacities. Therefore, the photosynthetic rate (A), ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco, EC 4.1.1.39) characteristics, and cytoplasmic pH of Brassica napus leaves with different K levels were measured to evaluate the effects of K on the carboxylation capacity by regulating subcellular pH. The results showed that biochemical limitation dominates the decrease of A. There was a close positive correlation between A and the Rubisco maximum carboxylation rate (Vcmax), which was closer than that between A and the maximum electron transport rate. The thresholds of leaf K concentrations causing decreased A, Vcmax, and Rubisco initial activity were consistent and close to 1.0% in the hydroponic experiments and 1.2% in the field experiments. K deficiency resulted in decreased Rubisco activity, which reduced carboxylation capacity. Moreover, the Rubisco initial activities in vitro with sufficient K supply or under K deficiency all were significantly reduced when the pH was decreased. The cytoplasmic pH was kept neutral at 7.5 under sufficient K supply, and decreased as the leaf K concentration declined below the threshold. Acidified cytoplasmic environment caused by K deficiency could not maintain the pH balance of the chloroplasts, leading to decreased Rubisco initial activity and photosynthetic capacity.
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Affiliation(s)
- Wenshi Hu
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China; Oil Crops Research Institute of Chinese Academy of Agricultural Sciences, Wuhan, 430062, China
| | - Hehe Gu
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
| | - Kunjiao Wang
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
| | - Zhifeng Lu
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
| | - Xiaokun Li
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
| | - Rihuan Cong
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
| | - Tao Ren
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China.
| | - Jianwei Lu
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, 430070, China
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Arogoundade AM, Mutanga O, Odindi J, Naicker R. The role of remote sensing in tropical grassland nutrient estimation: a review. ENVIRONMENTAL MONITORING AND ASSESSMENT 2023; 195:954. [PMID: 37452968 PMCID: PMC10349770 DOI: 10.1007/s10661-023-11562-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Accepted: 06/26/2023] [Indexed: 07/18/2023]
Abstract
The carbon (C) and nitrogen (N) ratio is a key indicator of nutrient utilization and limitations in rangelands. To understand the distribution of herbivores and grazing patterns, information on grass quality and quantity is important. In heterogeneous environments, remote sensing offers a timely, economical, and effective method for assessing foliar biochemical ratios at varying spatial and temporal scales. Hence, this study provides a synopsis of the advancement in remote sensing technology, limitations, and emerging opportunities in mapping the C:N ratio in rangelands. Specifically, the paper focuses on multispectral and hyperspectral sensors and investigates their properties, absorption features, empirical and physical methods, and algorithms in predicting the C:N ratio in grasslands. Literature shows that the determination of the C:N ratio in grasslands is not in line with developments in remote sensing technologies. Thus, the use of advanced and freely available sensors with improved spectral and spatial properties such as Sentinel 2 and Landsat 8/9 with sophisticated algorithms may provide new opportunities to estimate C:N ratio in grasslands at regional scales, especially in developing countries. Spectral bands in the near-infrared, shortwave infrared, red, and red edge were identified to predict the C:N ratio in plants. New indices developed from recent multispectral satellite imagery, for example, Sentinel 2 aided by cutting-edge algorithms, can improve the estimation of foliar biochemical ratios. Therefore, this study recommends that future research should adopt new satellite technologies with recent development in machine learning algorithms for improved mapping of the C:N ratio in grasslands.
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Affiliation(s)
- Adeola M. Arogoundade
- Discipline of Geography, School of Agricultural, Earth and Environmental Sciences, Department of Geography, University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - Onisimo Mutanga
- Discipline of Geography, School of Agricultural, Earth and Environmental Sciences, Department of Geography, University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - John Odindi
- Discipline of Geography, School of Agricultural, Earth and Environmental Sciences, Department of Geography, University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - Rowan Naicker
- Discipline of Geography, School of Agricultural, Earth and Environmental Sciences, Department of Geography, University of KwaZulu-Natal, Pietermaritzburg, South Africa
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40
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Zhou Y, Gunn LH, Birch R, Andersson I, Whitney SM. Grafting Rhodobacter sphaeroides with red algae Rubisco to accelerate catalysis and plant growth. NATURE PLANTS 2023; 9:978-986. [PMID: 37291398 DOI: 10.1038/s41477-023-01436-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2022] [Accepted: 05/10/2023] [Indexed: 06/10/2023]
Abstract
Improving the carboxylation properties of Rubisco has primarily arisen from unforeseen amino acid substitutions remote from the catalytic site. The unpredictability has frustrated rational design efforts to enhance plant Rubisco towards the prized growth-enhancing carboxylation properties of red algae Griffithsia monilis GmRubisco. To address this, we determined the crystal structure of GmRubisco to 1.7 Å. Three structurally divergent domains were identified relative to the red-type bacterial Rhodobacter sphaeroides RsRubisco that, unlike GmRubisco, are expressed in Escherichia coli and plants. Kinetic comparison of 11 RsRubisco chimaeras revealed that incorporating C329A and A332V substitutions from GmRubisco Loop 6 (corresponding to plant residues 328 and 331) into RsRubisco increased the carboxylation rate (kcatc) by 60%, the carboxylation efficiency in air by 22% and the CO2/O2 specificity (Sc/o) by 7%. Plastome transformation of this RsRubisco Loop 6 mutant into tobacco enhanced photosynthesis and growth up to twofold over tobacco producing wild-type RsRubisco. Our findings demonstrate the utility of RsRubisco for the identification and in planta testing of amino acid grafts from algal Rubisco that can enhance the enzyme's carboxylase potential.
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Affiliation(s)
- Yu Zhou
- Plant Science Division, Research School of Biology, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Laura H Gunn
- Laboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden
| | - Rosemary Birch
- Plant Science Division, Research School of Biology, The Australian National University, Canberra, Australian Capital Territory, Australia
| | - Inger Andersson
- Laboratory of Molecular Biophysics, Department of Cell and Molecular Biology, Uppsala University, Uppsala, Sweden
- Norwegian College of Fisheries Sciences, UiT Arctic University of Norway, Tromsø, Norway
- Institute of Biotechnology, Academy of Sciences of the Czech Republic, Biocev, Vestec, Czech Republic
| | - Spencer M Whitney
- Plant Science Division, Research School of Biology, The Australian National University, Canberra, Australian Capital Territory, Australia.
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41
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Schmiege SC, Heskel M, Fan Y, Way DA. It's only natural: Plant respiration in unmanaged systems. PLANT PHYSIOLOGY 2023; 192:710-727. [PMID: 36943293 PMCID: PMC10231469 DOI: 10.1093/plphys/kiad167] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 02/27/2023] [Accepted: 02/27/2023] [Indexed: 06/01/2023]
Abstract
Respiration plays a key role in the terrestrial carbon cycle and is a fundamental metabolic process in all plant tissues and cells. We review respiration from the perspective of plants that grow in their natural habitat and how it is influenced by wide-ranging elements at different scales, from metabolic substrate availability to shifts in climate. Decades of field-based measurements have honed our understanding of the biological and environmental controls on leaf, root, stem, and whole-organism respiration. Despite this effort, there remain gaps in our knowledge within and across species and ecosystems, especially in more challenging-to-measure tissues like roots. Recent databases of respiration rates and associated leaf traits from species representing diverse biomes, plant functional types, and regional climates have allowed for a wider-lens view at modeling this important CO2 flux. We also re-analyze published data sets to show that maximum leaf respiration rates (Rmax) in species from around the globe are related both to leaf economic traits and environmental variables (precipitation and air temperature), but that root respiration does not follow the same latitudinal trends previously published for leaf data. We encourage the ecophysiological community to continue to expand their study of plant respiration in tissues that are difficult to measure and at the whole plant and ecosystem levels to address outstanding questions in the field.
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Affiliation(s)
- Stephanie C Schmiege
- Plant Resilience Institute, Michigan State University, East Lansing, MI, 48824, USA
- Department of Biology, Western University, N6A 3K7, London, ON, Canada
| | - Mary Heskel
- Department of Biology, Macalester College, Saint Paul, MN, USA 55105
| | - Yuzhen Fan
- Research School of Biology, The Australian National University, Acton, ACT, Australia
| | - Danielle A Way
- Department of Biology, Western University, N6A 3K7, London, ON, Canada
- Research School of Biology, The Australian National University, Acton, ACT, Australia
- Environmental & Climate Sciences Department, Brookhaven National Laboratory, Upton, NY, USA
- Nicholas School of the Environment, Duke University, Durham, NC, USA
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Mishra D, Chitara MK, Upadhayay VK, Singh JP, Chaturvedi P. Plant growth promoting potential of urea doped calcium phosphate nanoparticles in finger millet ( Eleusine coracana (L.) Gaertn.) under drought stress. FRONTIERS IN PLANT SCIENCE 2023; 14:1137002. [PMID: 37255562 PMCID: PMC10225717 DOI: 10.3389/fpls.2023.1137002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Accepted: 04/12/2023] [Indexed: 06/01/2023]
Abstract
Drought is a leading threat that impinges on plant growth and productivity. Nanotechnology is considered an adequate tool for resolving various environmental issues by offering avant-garde and pragmatic solutions. Using nutrients in the nano-scale including CaP-U NPs is a novel fertilization strategy for crops. The present study was conducted to develop and utilize environment-friendly urea nanoparticles (NPs) based nano-fertilizers as a crop nutrient. The high solubility of urea molecules was controlled by integrating them with a matrix of calcium phosphate nanoparticles (CaP NPs). CaP NPs contain high phosphorous and outstanding biocompatibility. Scanning electron microscopy (FE-SEM), transmission electron microscopy (TEM) and X-ray diffraction analysis (XRD) were used to characterize the fabricated NPs. FE-SEM determined no areas of phase separation in urea and calcium phosphate, indicating the successful formation of an encapsulated nanocomposite between the two nano matrices. TEM examination confirmed a fiber-like structure of CaP-U NPs with 15 to 50 nm diameter and 100 to 200 nm length. The synthesized CaP-U NPs and bulk urea (0.0, 0.1% and 0.5%) were applied by foliar sprays at an interval of 15 days on pre-sowed VL-379 variety of finger millet (Eleusine coracana (L.) Gaertn.), under irrigated and drought conditions. The application of the CaP-U NPs significantly enhanced different plant growth attributes such as shoot length (29.4 & 41%), root length (46.4 & 51%), shoot fresh (33.6 & 55.8%) and dry weight (63 & 59.1%), and root fresh (57 & 61%) and dry weight (78 & 80.7%), improved pigment system (chlorophyll) and activated plant defense enzymes such as proline (35.4%), superoxide dismutase (47.7%), guaiacol peroxidase (30.2%), ascorbate peroxidase (70%) under both irrigated and drought conditions. Superimposition of five treatment combinations on drought suggested that CaP-U NPs at 0.5 followed by 0.1% provided the highest growth indices and defense-related enzymes, which were significantly different. Overall, our findings suggested that synthesized CaP-U NPs treatment of finger millet seeds improved plant growth and enzymatic regulation, particularly more in drought conditions providing insight into the strategy for not only finger millet but probably for other commercial cereals crops which suffer from fluctuating environmental conditions.
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Affiliation(s)
- Dhruv Mishra
- Department of Biological Sciences, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand (U.K.), India
| | - Manoj Kumar Chitara
- Department of Plant Pathology, College of Agriculture, G.B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand, India
| | - Viabhav Kumar Upadhayay
- Department of Microbiology, College of Basic Sciences & Humanities, Dr. Rajendra Prasad Central Agricultural University, Samastipur, Bihar, India
| | - Jagat Pal Singh
- Department of Physics, College of Basic Sciences and Humanities, G. B. Pant University of Agriculture and Technology, Pantnagar, India
| | - Preeti Chaturvedi
- Department of Biological Sciences, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand (U.K.), India
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Zhuang J, Chi Y, Wang Y, Zhou L. Trade-off of leaf-scale resource-use efficiencies along the vertical canopy of the subtropical forest. JOURNAL OF PLANT PHYSIOLOGY 2023; 286:154004. [PMID: 37209459 DOI: 10.1016/j.jplph.2023.154004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2022] [Revised: 04/26/2023] [Accepted: 05/07/2023] [Indexed: 05/22/2023]
Abstract
Leaf resource-use efficiencies are key indicators of plant adaptability to climate change, as they depend on both photosynthetic carbon assimilation and available resources. However, accurately quantifying the response of the coupled carbon and water cycles is challenging due to the canopy vertical variability in resource-use efficiencies, which introduces greater uncertainty into the calculations. Here we experimented to ascertain the vertical variations of leaf resource-use efficiencies along three canopy gradients of coniferous (Pinus elliottii Engelmann.) and broad-leaved (Schima Superba Gardn & Champ.) forests over one year in the subtropical region of China. The efficiency of water (WUE), and nitrogen (NUE) showed higher values in the top canopy level for the two species. The maximum efficiency of light (LUE) occurred in the bottom canopy level for both species. The impact of photosynthetic photon flux density (PPFD), leaf temperature (Tleaf), and vapor pressure deficit (VPD) on leaf resource-use efficiencies varied with canopy gradients in slash pine and schima superba. We also observed a trade-off between NUE and LUE for slash pine and between NUE and WUE for schima superba. Moreover, the variation in the correlation between LUE and WUE indicated a change in resource-use strategies for slash pine. These results emphasize the significance of vertical variations in resource-use efficiencies to enhance the prediction of future carbon-water dynamics in the subtropical forest.
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Affiliation(s)
- Jie Zhuang
- College of Geography and Environmental Sciences, Zhejiang Normal University, Jinhua, 321004, China
| | - Yonggang Chi
- College of Geography and Environmental Sciences, Zhejiang Normal University, Jinhua, 321004, China.
| | - Yonglin Wang
- College of Geography and Environmental Sciences, Zhejiang Normal University, Jinhua, 321004, China; National Engineering and Technology Center for Information Agriculture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Lei Zhou
- College of Geography and Environmental Sciences, Zhejiang Normal University, Jinhua, 321004, China.
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44
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Wang F, Wang Y, Ying L, Lu H, Liu Y, Liu Y, Xu J, Wu Y, Mo X, Wu Z, Mao C. Integrated transcriptomic analysis identifies coordinated responses to nitrogen and phosphate deficiency in rice. FRONTIERS IN PLANT SCIENCE 2023; 14:1164441. [PMID: 37223782 PMCID: PMC10200874 DOI: 10.3389/fpls.2023.1164441] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2023] [Accepted: 03/15/2023] [Indexed: 05/25/2023]
Abstract
Nitrogen (N) and phosphorus (P) are two primary components of fertilizers for crop production. Coordinated acquisition and utilization of N and P are crucial for plants to achieve nutrient balance and optimal growth in a changing rhizospheric nutrient environment. However, little is known about how N and P signaling pathways are integrated. We performed transcriptomic analyses and physiological experiments to explore gene expression profiles and physiological homeostasis in the response of rice (Oryza sativa) to N and P deficiency. We revealed that N and P shortage inhibit rice growth and uptake of other nutrients. Gene Ontology (GO) analysis of differentially expressed genes (DEGs) suggested that N and Pi deficiency stimulate specific different physiological reactions and also some same physiological processes in rice. We established the transcriptional regulatory network between N and P signaling pathways based on all DEGs. We determined that the transcript levels of 763 core genes changed under both N or P starvation conditions. Among these core genes, we focused on the transcription factor gene NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1 (NIGT1) and show that its encoded protein is a positive regulator of P homeostasis and a negative regulator of N acquisition in rice. NIGT1 promoted Pi uptake but inhibited N absorption, induced the expression of Pi responsive genes PT2 and SPX1 and repressed the N responsive genes NLP1 and NRT2.1. These results provide new clues about the mechanisms underlying the interaction between plant N and P starvation responses.
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Affiliation(s)
- Fei Wang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Yan Wang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Luying Ying
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Hong Lu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Yijian Liu
- Hainan Institute, Zhejiang University, Yazhou Bay Science and Technology City, Sanya, Hainan, China
| | - Yu Liu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Jiming Xu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Yunrong Wu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Xiaorong Mo
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Zhongchang Wu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
| | - Chuanzao Mao
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, Hangzhou, China
- Hainan Institute, Zhejiang University, Yazhou Bay Science and Technology City, Sanya, Hainan, China
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45
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Liu J, Zhang K, Bi J, Yu X, Luo L, Hu L. Mesophyll conductance and N allocation co-explained the variation in photosynthesis in two canola genotypes under contrasting nitrogen supply. FRONTIERS IN PLANT SCIENCE 2023; 14:1171331. [PMID: 37223789 PMCID: PMC10202220 DOI: 10.3389/fpls.2023.1171331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/22/2023] [Accepted: 04/13/2023] [Indexed: 05/25/2023]
Abstract
The application of nitrogen fertilizer within a normal range has been found to increase the leaf nitrogen content and photosynthetic rate of canola plants (Brassica napus L.). Despite numerous studies on the separate effects of CO2 diffusion limitation and nitrogen allocation trade-off on photosynthetic rate, few have examined both these factors in relation to the photosynthetic rate of canola. In this study, two genotypes of canola with varying leaf nitrogen content were analyzed to determine the impact of nitrogen supply on leaf photosynthesis, mesophyll conductance, and nitrogen partitioning. The results showed that the CO2 assimilation rate (A), mesophyll conductance (g m), and photosynthetic nitrogen content (N psn) increased with an increase in nitrogen supply in both genotypes. The relationship between nitrogen content and A followed a linear-plateau regression, while A had linear relationships with both photosynthetic nitrogen content and g m, indicating that the key to enhancing A is increasing the distribution of leaf nitrogen into the photosynthetic apparatus and g m, rather than just increasing nitrogen content. Under high nitrogen treatment, the genotype (QZ) with high nitrogen content had 50.7% more nitrogen than the other genotype (ZY21), but had similar A, which was primarily due to ZY21's higher photosynthetic nitrogen distribution ratio and stomatal conductance (g sw). On the other hand, QZ showed a higher A than ZY21 under low nitrogen treatment as QZ had higher N psn and g m compared to ZY21. Our results indicate that, in selecting high PNUE rapeseed varieties, it is important to consider the higher photosynthetic nitrogen distribution ratio and CO2 diffusion conductance.
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Affiliation(s)
- Jiahuan Liu
- Ministry of Agriculture and Rural Affairs (MARA) Key Laboratory of Crop Ecophysiology Farming System in the Middle Reaches of the Yangtze River, College of Plant Science Technology, Huazhong Agricultural University, Wuhan, China
| | | | - Junguo Bi
- Shanghai Agrobiological Gene Center, Shanghai, China
| | - Xinqiao Yu
- Shanghai Agrobiological Gene Center, Shanghai, China
| | - Lijun Luo
- Shanghai Agrobiological Gene Center, Shanghai, China
| | - Liyong Hu
- Ministry of Agriculture and Rural Affairs (MARA) Key Laboratory of Crop Ecophysiology Farming System in the Middle Reaches of the Yangtze River, College of Plant Science Technology, Huazhong Agricultural University, Wuhan, China
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46
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Wang XQ, Sun H, Zeng ZL, Huang W. Within-branch photosynthetic gradients are more related to the coordinated investments of nitrogen and water than leaf mass per area. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 198:107681. [PMID: 37054614 DOI: 10.1016/j.plaphy.2023.107681] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Revised: 03/18/2023] [Accepted: 04/03/2023] [Indexed: 05/07/2023]
Abstract
Nitrogen (N) and water are key resources for leaf photosynthesis and the growth of whole plants. Within-branch leaves need different amounts of N and water to support their differing photosynthetic capacities according to light exposure. To test this scheme, we measured the within-branch investments of N and water and their effects on photosynthetic traits in two deciduous tree species Paulownia tomentosa and Broussonetia papyrifera. We found that leaf photosynthetic capacity gradually increased from branch bottom to top (i.e. from shade to sun leaves). Concomitantly, stomatal conductance (gs) and leaf N content gradually increased, owing to the symport of water and inorganic mineral from root to leaf. Variation of leaf N content led to large gradients of mesophyll conductance, maximum velocity of Rubisco for carboxylation, maximum electron transport rate and leaf mass per area (LMA). Correlation analysis indicated that the within-branch difference in photosynthetic capacity was mainly related to gs and leaf N content, with a relatively minor contribution of LMA. Furthermore, the simultaneous increases of gs and leaf N content enhanced photosynthetic N use efficiency (PNUE) but hardly affected water use efficiency. Therefore, within-branch adjustment of N and water investments is an important strategy used by plants to optimize the overall photosynthetic carbon gain and PNUE.
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Affiliation(s)
- Xiao-Qian Wang
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China
| | - Hu Sun
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Zhi-Lan Zeng
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Wei Huang
- Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, China.
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47
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Peng B, Wu X, Zhang C, Zhang C, Lan L, Ping J, Ying Y. In-Time Detection of Plant Water Status Change by Self-Adhesive, Water-Proof, and Gas-Permeable Electrodes. ACS APPLIED MATERIALS & INTERFACES 2023; 15:19199-19208. [PMID: 37022351 DOI: 10.1021/acsami.3c01789] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Leaf capacitance can reflect plant water content. However, the rigid electrodes used in leaf capacitance monitoring may affect plant health status. Herein, we report a self-adhesive, water-proof, and gas-permeable electrode fabricated by in situ electrospinning of a polylactic acid nanofiber membrane (PLANFM) on a leaf, spraying a layer of the carbon nanotube membrane (CNTM) on PLANFM, and in situ electrospinning of PLANFM on CNTM. The electrodes could be self-adhered to the leaf via electrostatic adhesion due to the charges on PLANFM and the leaf, thus forming a capacitance sensor. Compared with the electrode fabricated by a transferring approach, the in situ fabricated one did not show obvious influence on plant physiological parameters. On that basis, a wireless leaf capacitance sensing system was developed, and the change of plant water status was detected in the first day of drought stress, which was much earlier than direct observation of the plant appearance. This work paved a useful way to realize noninvasive and real-time detection of stress using plant wearable electronics.
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Affiliation(s)
- Bo Peng
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
| | - Xinyue Wu
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
| | - Chi Zhang
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
| | - Chao Zhang
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
| | - Lingyi Lan
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
| | - Jianfeng Ping
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
- Innovation Platform of Micro/Nano Technology for Biosensing, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou 311200, People's Republic of China
- Key Laboratory of Intelligent Equipment and Robotics for Agriculture of Zhejiang Province, Hangzhou 310058, People's Republic of China
| | - Yibin Ying
- Laboratory of Agricultural Information Intelligent Sensing, School of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, People's Republic of China
- Innovation Platform of Micro/Nano Technology for Biosensing, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou 311200, People's Republic of China
- Key Laboratory of Intelligent Equipment and Robotics for Agriculture of Zhejiang Province, Hangzhou 310058, People's Republic of China
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48
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Parkash V, Snider JL, Sintim HY, Hand LC, Virk G, Pokhrel A. Differential sensitivities of photosynthetic processes and carbon loss mechanisms govern N-induced variation in net carbon assimilation rate for field-grown cotton. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:2638-2652. [PMID: 36715336 DOI: 10.1093/jxb/erad038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Accepted: 01/28/2023] [Indexed: 06/06/2023]
Abstract
Nitrogen (N) deficiency limits the net carbon assimilation rate (AN), but the relative N sensitivities of photosynthetic component processes and carbon loss mechanisms remain relatively unexplored for field-grown cotton. Therefore, the objective of the current study was to define the relative sensitivity of individual physiological processes driving N deficiency-induced declines in AN for field-grown cotton. Among the potential diffusional limitations evaluated, mesophyll conductance was the only parameter substantially reduced by N deficiency, but this did not affect CO2 availability in the chloroplast. A number of metabolic processes were negatively impacted by N deficiency, and these effects were more pronounced at lower leaf positions in the cotton canopy. Ribulose bisphosphate (RuBP) regeneration and carboxylation, AN, and gross photosynthesis were the most sensitive metabolic processes to N deficiency, whereas photosynthetic electron transport processes, electron flux to photorespiration, and dark respiration exhibited intermediate sensitivity to N deficiency. Among thylakoid-specific processes, the quantum yield of PSI end electron acceptor reduction was the most sensitive process to N deficiency. It was concluded that AN is primarily limited by Rubisco carboxylation and RuBP regeneration under N deficiency in field-grown cotton, and the differential N sensitivities of the photosynthetic process and carbon loss mechanisms contributed significantly to photosynthetic declines.
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Affiliation(s)
- Ved Parkash
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA 31794, USA
| | - John L Snider
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA 31794, USA
| | - Henry Y Sintim
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA 31794, USA
| | - Lavesta C Hand
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA 31794, USA
| | - Gurpreet Virk
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA 31794, USA
| | - Amrit Pokhrel
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA 31794, USA
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49
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Gago J, Nadal M, Clemente-Moreno MJ, Figueroa CM, Medeiros DB, Cubo-Ribas N, Cavieres LA, Gulías J, Fernie AR, Flexas J, Bravo LA. Nutrient availability regulates Deschampsia antarctica photosynthetic and stress tolerance performance in Antarctica. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:2620-2637. [PMID: 36880307 DOI: 10.1093/jxb/erad043] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2022] [Accepted: 03/05/2023] [Indexed: 06/06/2023]
Abstract
Deschampsia antarctica is one of the only two native vascular plants in Antarctica, mostly located in the ice-free areas of the Peninsula's coast and adjacent islands. This region is characterized by a short growing season, frequent extreme climatic events, and soils with reduced nutrient availability. However, it is unknown whether its photosynthetic and stress tolerance mechanisms are affected by the availability of nutrients to deal with this particular environment. We studied the photosynthetic, primary metabolic, and stress tolerance performance of D. antarctica plants growing on three close sites (<500 m) with contrasting soil nutrient conditions. Plants from all sites showed similar photosynthetic rates, but mesophyll conductance and photobiochemistry were more limiting (~25%) in plants growing on low-nutrient availability soils. Additionally, these plants showed higher stress levels and larger investments in photoprotection and carbon pools, most probably driven by the need to stabilize proteins and membranes, and remodel cell walls. In contrast, when nutrients were readily available, plants shifted their carbon investment towards amino acids related to osmoprotection, growth, antioxidants, and polyamines, leading to vigorous plants without appreciable levels of stress. Taken together, these findings demonstrate that D. antarctica displays differential physiological performances to cope with adverse conditions depending on resource availability, allowing it to maximize stress tolerance without jeopardizing photosynthetic capacity.
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Affiliation(s)
- Jorge Gago
- Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB)/Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Ctra. Valldemossa km 7.5, 07122 Palma, Spain
| | - Miquel Nadal
- Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB)/Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Ctra. Valldemossa km 7.5, 07122 Palma, Spain
- Departamento de Sistemas Agrícolas, Forestales y Medio Ambiente, Centro de Investigación y Tecnología Agroalimentaria de Aragón (CITA), Avda. Montañana 930, 50059 Zaragoza, Spain
| | - María José Clemente-Moreno
- Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB)/Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Ctra. Valldemossa km 7.5, 07122 Palma, Spain
| | - Carlos María Figueroa
- Instituto de Agrobiotecnología del Litoral, UNL, CONICET, FBCB, 3000 Santa Fe, Argentina
| | - David Barbosa Medeiros
- Central Metabolism Group, Molecular Physiology Department, Max-Planck-Institut für Molekulare Pflanzenphysiologie, Golm, Germany
| | - Neus Cubo-Ribas
- Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB)/Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Ctra. Valldemossa km 7.5, 07122 Palma, Spain
| | - Lohengrin Alexis Cavieres
- Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción and Instituto de Ecología y Biodiversidad (IEB), Concepción, Chile
- Center of Plant, Soil Interaction and Natural Resources Biotechnology, Scientific and Technological Bioresource Nucleus. Universidad de La Frontera, Temuco, Chile
| | - Javier Gulías
- Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB)/Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Ctra. Valldemossa km 7.5, 07122 Palma, Spain
| | - Alisdair Robert Fernie
- Central Metabolism Group, Molecular Physiology Department, Max-Planck-Institut für Molekulare Pflanzenphysiologie, Golm, Germany
| | - Jaume Flexas
- Research Group on Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB)/Instituto de Investigaciones Agroambientales y de Economía del Agua (INAGEA), Ctra. Valldemossa km 7.5, 07122 Palma, Spain
| | - León Aloys Bravo
- Laboratorio de Fisiología y Biología Molecular Vegetal, Dpt. de Cs. Agronómicas y Recursos Naturales, Facultad de Cs. Agropecuarias y Forestales, Instituto de Agroindustria, Universidad de La Frontera, Temuco, Chile
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Shen Q, Zeng X, Kong L, Sun X, Shi J, Wu Z, Guo Y, Pan D. Research Progress of Nitrite Metabolism in Fermented Meat Products. Foods 2023; 12:foods12071485. [PMID: 37048306 PMCID: PMC10094046 DOI: 10.3390/foods12071485] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 03/14/2023] [Accepted: 03/21/2023] [Indexed: 04/05/2023] Open
Abstract
Nitrite is a common color and flavor enhancer in fermented meat products, but its secondary amines may transfer to the carcinogen N-nitrosamines. This review focuses on the sources, degradation, limitations, and alteration techniques of nitrite. The transition among NO3− and NO2−, NH4+, and N2 constitutes the balance of nitrogen. Exogenous addition is the most common source of nitrite in fermented meat products, but it can also be produced by contamination and endogenous microbial synthesis. While nitrite is degraded by acids, enzymes, and other metabolites produced by lactic acid bacteria (LAB), four nitrite reductase enzymes play a leading role. At a deeper level, nitrite metabolism is primarily regulated by the genes found in these bacteria. By incorporating antioxidants, chromogenic agents, bacteriostats, LAB, or non-thermal plasma sterilization, the amount of nitrite supplied can be decreased, or even eliminated. Finally, the aim of producing low-nitrite fermented meat products is expected to be achieved.
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Affiliation(s)
- Qiyuan Shen
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
| | - Xiaoqun Zeng
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
| | - Lingyu Kong
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
| | - Xiaoqian Sun
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
| | - Jingjing Shi
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
| | - Zhen Wu
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
| | - Yuxing Guo
- School of Food Science and Pharmaceutical Engineering, Nanjing Normal University, Nanjing 210097, China
| | - Daodong Pan
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Ningbo 315211, China
- Key Laboratory of Animal Protein Food Processing Technology of Zhejiang Province, College of Food and Pharmaceutical Sciences, Ningbo University, Ningbo 315800, China
- Zhejiang-Malaysia Joint Research Laboratory for Agricultural Product Processing and Nutrition, Ningbo 315800, China
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