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For: van Veen H, Vashisht D, Akman M, Girke T, Mustroph A, Reinen E, Hartman S, Kooiker M, van Tienderen P, Schranz ME, Bailey-Serres J, Voesenek LACJ, Sasidharan R. Transcriptomes of Eight Arabidopsis thaliana Accessions Reveal Core Conserved, Genotype- and Organ-Specific Responses to Flooding Stress. Plant Physiol 2016;172:668-689. [PMID: 27208254 PMCID: PMC5047075 DOI: 10.1104/pp.16.00472] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2016] [Accepted: 05/13/2016] [Indexed: 05/02/2023]
Number Cited by Other Article(s)
1
Dalle Carbonare L, Jiménez JDLC, Lichtenauer S, van Veen H. Plant responses to limited aeration: Advances and future challenges. PLANT DIRECT 2023;7:e488. [PMID: 36993903 PMCID: PMC10040318 DOI: 10.1002/pld3.488] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2022] [Revised: 02/21/2023] [Accepted: 02/22/2023] [Indexed: 06/19/2023]
2
Zhu FY, Chen X, Song YC, Lam LPY, Tobimatsu Y, Gao B, Chen MX, Cao FL. SWATH-MS-based proteogenomic analysis reveals the involvement of alternative splicing in poplar upon lead stress. Genome Res 2023;33:371-385. [PMID: 36963844 PMCID: PMC10078296 DOI: 10.1101/gr.277473.122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 02/22/2023] [Indexed: 03/26/2023]
3
Marszalek-Zenczak M, Satyr A, Wojciechowski P, Zenczak M, Sobieszczanska P, Brzezinski K, Iefimenko T, Figlerowicz M, Zmienko A. Analysis of Arabidopsis non-reference accessions reveals high diversity of metabolic gene clusters and discovers new candidate cluster members. FRONTIERS IN PLANT SCIENCE 2023;14:1104303. [PMID: 36778696 PMCID: PMC9909608 DOI: 10.3389/fpls.2023.1104303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Accepted: 01/11/2023] [Indexed: 06/18/2023]
4
Brazel AJ, Graciet E. Complexity of Abiotic Stress Stimuli: Mimicking Hypoxic Conditions Experimentally on the Basis of Naturally Occurring Environments. Methods Mol Biol 2023;2642:23-48. [PMID: 36944871 DOI: 10.1007/978-1-0716-3044-0_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]
5
Santiago-Velasco M, Ortiz-López E, Flores-Méndez A, Barrera-Figueroa BE, García-López E, Peña-Castro JM. Transformation efficiency of Arabidopsis thaliana ecotypes with differential tolerance to submergence stress. ALL LIFE 2022. [DOI: 10.1080/26895293.2022.2124315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]  Open
6
Yang J, Mathew IE, Rhein H, Barker R, Guo Q, Brunello L, Loreti E, Barkla BJ, Gilroy S, Perata P, Hirschi KD. The vacuolar H+/Ca transporter CAX1 participates in submergence and anoxia stress responses. PLANT PHYSIOLOGY 2022;190:2617-2636. [PMID: 35972350 PMCID: PMC9706465 DOI: 10.1093/plphys/kiac375] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 07/17/2022] [Indexed: 05/04/2023]
7
Liu Z, Hartman S, van Veen H, Zhang H, Leeggangers HACF, Martopawiro S, Bosman F, de Deugd F, Su P, Hummel M, Rankenberg T, Hassall KL, Bailey-Serres J, Theodoulou FL, Voesenek LACJ, Sasidharan R. Ethylene augments root hypoxia tolerance via growth cessation and reactive oxygen species amelioration. PLANT PHYSIOLOGY 2022;190:1365-1383. [PMID: 35640551 PMCID: PMC9516759 DOI: 10.1093/plphys/kiac245] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 04/29/2022] [Indexed: 05/20/2023]
8
Morales A, de Boer HJ, Douma JC, Elsen S, Engels S, Glimmerveen T, Sajeev N, Huber M, Luimes M, Luitjens E, Raatjes K, Hsieh C, Teapal J, Wildenbeest T, Jiang Z, Pareek A, Singla-Pareek S, Yin X, Evers J, Anten NPR, van Zanten M, Sasidharan R. Effects of sublethal single, simultaneous and sequential abiotic stresses on phenotypic traits of Arabidopsis thaliana. AOB PLANTS 2022;14:plac029. [PMID: 35854681 PMCID: PMC9291396 DOI: 10.1093/aobpla/plac029] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Accepted: 06/21/2022] [Indexed: 05/24/2023]
9
Alternative Splicing and Its Roles in Plant Metabolism. Int J Mol Sci 2022;23:ijms23137355. [PMID: 35806361 PMCID: PMC9266299 DOI: 10.3390/ijms23137355] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 06/27/2022] [Accepted: 06/28/2022] [Indexed: 01/02/2023]  Open
10
Yuan Z, Ni X, Chen C, Zhang S, Chen X, Yang Z, Li C. Effects of different water conditions on the biomass, root morphology and aerenchyma formation in bermudagrass (Cynodon dactylon (L.) Pers). BMC PLANT BIOLOGY 2022;22:266. [PMID: 35637438 PMCID: PMC9150380 DOI: 10.1186/s12870-022-03653-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Accepted: 05/18/2022] [Indexed: 06/15/2023]
11
Full-Length Transcriptome and RNA-Seq Analyses Reveal the Mechanisms Underlying Waterlogging Tolerance in Kiwifruit (Actinidia valvata). Int J Mol Sci 2022;23:ijms23063237. [PMID: 35328659 PMCID: PMC8951935 DOI: 10.3390/ijms23063237] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Revised: 03/15/2022] [Accepted: 03/15/2022] [Indexed: 12/13/2022]  Open
12
Hydrogen Sulfide Enhances Plant Tolerance to Waterlogging Stress. PLANTS 2021;10:plants10091928. [PMID: 34579462 PMCID: PMC8468677 DOI: 10.3390/plants10091928] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 09/13/2021] [Accepted: 09/13/2021] [Indexed: 12/26/2022]
13
Bjornson M, Pimprikar P, Nürnberger T, Zipfel C. The transcriptional landscape of Arabidopsis thaliana pattern-triggered immunity. NATURE PLANTS 2021;7:579-586. [PMID: 33723429 PMCID: PMC7610817 DOI: 10.1038/s41477-021-00874-5] [Citation(s) in RCA: 130] [Impact Index Per Article: 43.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 02/08/2021] [Indexed: 05/04/2023]
14
Mohanty B. Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence. Front Genet 2021;12:639654. [PMID: 33796132 PMCID: PMC8008075 DOI: 10.3389/fgene.2021.639654] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Accepted: 02/08/2021] [Indexed: 12/24/2022]  Open
15
Sanclemente MA, Ma F, Liu P, Della Porta A, Singh J, Wu S, Colquhoun T, Johnson T, Guan JC, Koch KE. Sugar modulation of anaerobic-response networks in maize root tips. PLANT PHYSIOLOGY 2021;185:295-317. [PMID: 33721892 PMCID: PMC8133576 DOI: 10.1093/plphys/kiaa029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Accepted: 10/28/2020] [Indexed: 05/11/2023]
16
Long-Term Waterlogging as Factor Contributing to Hypoxia Stress Tolerance Enhancement in Cucumber: Comparative Transcriptome Analysis of Waterlogging Sensitive and Tolerant Accessions. Genes (Basel) 2021;12:genes12020189. [PMID: 33525400 PMCID: PMC7912563 DOI: 10.3390/genes12020189] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 01/15/2021] [Accepted: 01/23/2021] [Indexed: 02/06/2023]  Open
17
Kou SM, Jin R, Wu YY, Huang JW, Zhang QY, Sun NJ, Yang Y, Guan CF, Wang WQ, Zhu CQ, Zhu QG, Yin XR. Transcriptome Analysis Revealed the Roles of Carbohydrate Metabolism on Differential Acetaldehyde Production Capacity in Persimmon Fruit in Response to High-CO2 Treatment. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021;69:836-845. [PMID: 33416310 DOI: 10.1021/acs.jafc.0c06001] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
18
Formation and diversification of a paradigm biosynthetic gene cluster in plants. Nat Commun 2020;11:5354. [PMID: 33097700 PMCID: PMC7584637 DOI: 10.1038/s41467-020-19153-6] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Accepted: 09/29/2020] [Indexed: 12/31/2022]  Open
19
Identification of nitric oxide (NO)-responsive genes under hypoxia in tomato (Solanum lycopersicum L.) root. Sci Rep 2020;10:16509. [PMID: 33020554 PMCID: PMC7536229 DOI: 10.1038/s41598-020-73613-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2020] [Accepted: 09/14/2020] [Indexed: 12/04/2022]  Open
20
The Anaerobic Product Ethanol Promotes Autophagy-Dependent Submergence Tolerance in Arabidopsis. Int J Mol Sci 2020;21:ijms21197361. [PMID: 33028029 PMCID: PMC7583018 DOI: 10.3390/ijms21197361] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2020] [Revised: 09/29/2020] [Accepted: 10/02/2020] [Indexed: 02/07/2023]  Open
21
Two Alternative Splicing Variants of AtERF73/HRE1, HRE1α and HRE1β, Have Differential Transactivation Activities in Arabidopsis. Int J Mol Sci 2020;21:ijms21196984. [PMID: 32977426 PMCID: PMC7582492 DOI: 10.3390/ijms21196984] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 09/20/2020] [Accepted: 09/21/2020] [Indexed: 12/24/2022]  Open
22
Sousa AO, Camillo LR, Assis ETCM, Lima NS, Silva GO, Kirch RP, Silva DC, Ferraz A, Pasquali G, Costa MGC. EgPHI-1, a PHOSPHATE-INDUCED-1 gene from Eucalyptus globulus, is involved in shoot growth, xylem fiber length and secondary cell wall properties. PLANTA 2020;252:45. [PMID: 32880001 DOI: 10.1007/s00425-020-03450-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Accepted: 08/27/2020] [Indexed: 05/15/2023]
23
Hartman S, van Dongen N, Renneberg DM, Welschen-Evertman RA, Kociemba J, Sasidharan R, Voesenek LA. Ethylene Differentially Modulates Hypoxia Responses and Tolerance across Solanum Species. PLANTS 2020;9:plants9081022. [PMID: 32823611 PMCID: PMC7465973 DOI: 10.3390/plants9081022] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Revised: 08/10/2020] [Accepted: 08/10/2020] [Indexed: 02/07/2023]
24
Integration of QTL, Transcriptome and Polymorphism Studies Reveals Candidate Genes for Water Stress Response in Tomato. Genes (Basel) 2020;11:genes11080900. [PMID: 32784535 PMCID: PMC7465520 DOI: 10.3390/genes11080900] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Revised: 08/03/2020] [Accepted: 08/04/2020] [Indexed: 11/22/2022]  Open
25
Calf OW, Lortzing T, Weinhold A, Poeschl Y, Peters JL, Huber H, Steppuhn A, van Dam NM. Slug Feeding Triggers Dynamic Metabolomic and Transcriptomic Responses Leading to Induced Resistance in Solanum dulcamara. FRONTIERS IN PLANT SCIENCE 2020;11:803. [PMID: 32625224 PMCID: PMC7314995 DOI: 10.3389/fpls.2020.00803] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Accepted: 05/19/2020] [Indexed: 05/22/2023]
26
Yu F, Tan Z, Fang T, Tang K, Liang K, Qiu F. A Comprehensive Transcriptomics Analysis Reveals Long Non-Coding RNA to be Involved in the Key Metabolic Pathway in Response to Waterlogging Stress in Maize. Genes (Basel) 2020;11:genes11030267. [PMID: 32121334 PMCID: PMC7140884 DOI: 10.3390/genes11030267] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Revised: 02/24/2020] [Accepted: 02/27/2020] [Indexed: 12/17/2022]  Open
27
Wang J, Sun H, Sheng J, Jin S, Zhou F, Hu Z, Diao Y. Transcriptome, physiological and biochemical analysis of Triarrhena sacchariflora in response to flooding stress. BMC Genet 2019;20:88. [PMID: 31783726 PMCID: PMC6884903 DOI: 10.1186/s12863-019-0790-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2018] [Accepted: 11/18/2019] [Indexed: 01/17/2023]  Open
28
Lee TA, Bailey-Serres J. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. THE PLANT CELL 2019;31:2573-2595. [PMID: 31519798 PMCID: PMC6881120 DOI: 10.1105/tpc.19.00463] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Revised: 08/21/2019] [Accepted: 09/12/2019] [Indexed: 05/19/2023]
29
Savchenko T, Rolletschek H, Heinzel N, Tikhonov K, Dehesh K. Waterlogging tolerance rendered by oxylipin-mediated metabolic reprogramming in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2019;70:2919-2932. [PMID: 30854562 PMCID: PMC6506769 DOI: 10.1093/jxb/erz110] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Accepted: 02/26/2019] [Indexed: 05/20/2023]
30
Liu W, Lin L, Zhang Z, Liu S, Gao K, Lv Y, Tao H, He H. Gene co-expression network analysis identifies trait-related modules in Arabidopsis thaliana. PLANTA 2019;249:1487-1501. [PMID: 30701323 DOI: 10.1007/s00425-019-03102-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2018] [Accepted: 01/28/2019] [Indexed: 05/22/2023]
31
Fukao T, Barrera-Figueroa BE, Juntawong P, Peña-Castro JM. Submergence and Waterlogging Stress in Plants: A Review Highlighting Research Opportunities and Understudied Aspects. FRONTIERS IN PLANT SCIENCE 2019;10:340. [PMID: 30967888 PMCID: PMC6439527 DOI: 10.3389/fpls.2019.00340] [Citation(s) in RCA: 121] [Impact Index Per Article: 24.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2018] [Accepted: 03/05/2019] [Indexed: 05/20/2023]
32
Chen MX, Zhu FY, Wang FZ, Ye NH, Gao B, Chen X, Zhao SS, Fan T, Cao YY, Liu TY, Su ZZ, Xie LJ, Hu QJ, Wu HJ, Xiao S, Zhang J, Liu YG. Alternative splicing and translation play important roles in hypoxic germination in rice. JOURNAL OF EXPERIMENTAL BOTANY 2019;70:817-833. [PMID: 30535157 PMCID: PMC6363088 DOI: 10.1093/jxb/ery393] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Accepted: 10/27/2018] [Indexed: 05/04/2023]
33
Bajay SK, Cruz MV, da Silva CC, Murad NF, Brandão MM, de Souza AP. Extremophiles as a Model of a Natural Ecosystem: Transcriptional Coordination of Genes Reveals Distinct Selective Responses of Plants Under Climate Change Scenarios. FRONTIERS IN PLANT SCIENCE 2018;9:1376. [PMID: 30283484 PMCID: PMC6156123 DOI: 10.3389/fpls.2018.01376] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2018] [Accepted: 08/29/2018] [Indexed: 05/29/2023]
34
Improving Flooding Tolerance of Crop Plants. AGRONOMY-BASEL 2018. [DOI: 10.3390/agronomy8090160] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
35
Cheng B, Furtado A, Henry RJ. Long-read sequencing of the coffee bean transcriptome reveals the diversity of full-length transcripts. Gigascience 2018;6:1-13. [PMID: 29048540 PMCID: PMC5737654 DOI: 10.1093/gigascience/gix086] [Citation(s) in RCA: 70] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2017] [Accepted: 08/23/2017] [Indexed: 11/20/2022]  Open
36
Yao X, Ma F, Li Y, Ding X, Zou D, Niu Y, Bian H, Deng J. Effect of water cadmium concentration and water level on the growth performance of Salix triandroides cuttings. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018;25:8002-8011. [PMID: 29305802 DOI: 10.1007/s11356-017-1158-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Accepted: 12/26/2017] [Indexed: 06/07/2023]
37
Munch D, Gupta V, Bachmann A, Busch W, Kelly S, Mun T, Andersen SU. The Brassicaceae Family Displays Divergent, Shoot-Skewed NLR Resistance Gene Expression. PLANT PHYSIOLOGY 2018;176:1598-1609. [PMID: 29187571 PMCID: PMC5813569 DOI: 10.1104/pp.17.01606] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2017] [Accepted: 11/24/2017] [Indexed: 05/18/2023]
38
Wurzinger B, Nukarinen E, Nägele T, Weckwerth W, Teige M. The SnRK1 Kinase as Central Mediator of Energy Signaling between Different Organelles. PLANT PHYSIOLOGY 2018;176:1085-1094. [PMID: 29311271 PMCID: PMC5813556 DOI: 10.1104/pp.17.01404] [Citation(s) in RCA: 100] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2017] [Accepted: 12/29/2017] [Indexed: 05/03/2023]
39
Sasidharan R, Hartman S, Liu Z, Martopawiro S, Sajeev N, van Veen H, Yeung E, Voesenek LACJ. Signal Dynamics and Interactions during Flooding Stress. PLANT PHYSIOLOGY 2018;176:1106-1117. [PMID: 29097391 PMCID: PMC5813540 DOI: 10.1104/pp.17.01232] [Citation(s) in RCA: 117] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Accepted: 10/27/2017] [Indexed: 05/20/2023]
40
Kadam S, Abril A, Dhanapal AP, Koester RP, Vermerris W, Jose S, Fritschi FB. Characterization and Regulation of Aquaporin Genes of Sorghum [Sorghum bicolor (L.) Moench] in Response to Waterlogging Stress. FRONTIERS IN PLANT SCIENCE 2017;8:862. [PMID: 28611797 PMCID: PMC5447673 DOI: 10.3389/fpls.2017.00862] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2016] [Accepted: 05/09/2017] [Indexed: 05/25/2023]
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Wang X, Jiang Y, Zhao X, Song X, Xiao X, Pei Z, Liu H. Association of Candidate Genes With Submergence Response in Perennial Ryegrass. FRONTIERS IN PLANT SCIENCE 2017;8:791. [PMID: 28559908 PMCID: PMC5432546 DOI: 10.3389/fpls.2017.00791] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/25/2017] [Accepted: 04/27/2017] [Indexed: 06/07/2023]
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Yin X, Hiraga S, Hajika M, Nishimura M, Komatsu S. Transcriptomic analysis reveals the flooding tolerant mechanism in flooding tolerant line and abscisic acid treated soybean. PLANT MOLECULAR BIOLOGY 2017;93:479-496. [PMID: 28012053 DOI: 10.1007/s11103-016-0576-2] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2016] [Accepted: 12/07/2016] [Indexed: 06/06/2023]
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Yuan LB, Dai YS, Xie LJ, Yu LJ, Zhou Y, Lai YX, Yang YC, Xu L, Chen QF, Xiao S. Jasmonate Regulates Plant Responses to Postsubmergence Reoxygenation through Transcriptional Activation of Antioxidant Synthesis. PLANT PHYSIOLOGY 2017;173:1864-1880. [PMID: 28082717 PMCID: PMC5338657 DOI: 10.1104/pp.16.01803] [Citation(s) in RCA: 71] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Accepted: 01/11/2017] [Indexed: 05/19/2023]
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Kusunoki K, Nakano Y, Tanaka K, Sakata Y, Koyama H, Kobayashi Y. Transcriptomic variation among six Arabidopsis thaliana accessions identified several novel genes controlling aluminium tolerance. PLANT, CELL & ENVIRONMENT 2017;40:249-263. [PMID: 27861992 DOI: 10.1111/pce.12866] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2016] [Revised: 10/28/2016] [Accepted: 10/30/2016] [Indexed: 05/10/2023]
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Zhou M, Callaham JB, Reyes M, Stasiak M, Riva A, Zupanska AK, Dixon MA, Paul AL, Ferl RJ. Dissecting Low Atmospheric Pressure Stress: Transcriptome Responses to the Components of Hypobaria in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2017;8:528. [PMID: 28443120 PMCID: PMC5385376 DOI: 10.3389/fpls.2017.00528] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2016] [Accepted: 03/24/2017] [Indexed: 05/10/2023]
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Vashisht D, van Veen H, Akman M, Sasidharan R. Variation in Arabidopsis flooding responses identifies numerous putative "tolerance genes". PLANT SIGNALING & BEHAVIOR 2016;11:e1249083. [PMID: 27830990 PMCID: PMC5157898 DOI: 10.1080/15592324.2016.1249083] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Accepted: 10/11/2016] [Indexed: 05/31/2023]
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Ainsworth EA, Bernacchi CJ, Dohleman FG. Focus on Ecophysiology. PLANT PHYSIOLOGY 2016;172:619-621. [PMID: 27694394 PMCID: PMC5047120 DOI: 10.1104/pp.16.01408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
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Loreti E, van Veen H, Perata P. Plant responses to flooding stress. CURRENT OPINION IN PLANT BIOLOGY 2016;33:64-71. [PMID: 27322538 DOI: 10.1016/j.pbi.2016.06.005] [Citation(s) in RCA: 144] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2016] [Revised: 06/04/2016] [Accepted: 06/06/2016] [Indexed: 05/18/2023]
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