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Niu F, Cui X, Yang B, Wang R, Zhao P, Zhao X, Zhang H, Fan X, Li Y, Deyholos MK, Jiang YQ. WRKY6 transcription factor modulates root potassium acquisition through promoting expression of AKT1 in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 118:1652-1667. [PMID: 38418388 DOI: 10.1111/tpj.16703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Revised: 02/01/2024] [Accepted: 02/14/2024] [Indexed: 03/01/2024]
Abstract
Potassium (K+), being an essential macronutrient in plants, plays a central role in many aspects. Root growth is highly plastic and is affected by many different abiotic stresses including nutrient deficiency. The Shaker-type K+ channel Arabidopsis (Arabidopsis thaliana) K+ Transporter 1 (AKT1) is responsible for K+ uptake under both low and high external K+ conditions. However, the upstream transcription factor of AKT1 is not clear. Here, we demonstrated that the WRKY6 transcription factor modulates root growth to low potassium (LK) stress in Arabidopsis. WRKY6 showed a quick response to LK stress and also to many other abiotic stress treatments. The two wrky6 T-DNA insertion mutants were highly sensitive to LK treatment, whose primary root lengths were much shorter, less biomass and lower K+ content in roots than those of wild-type plants, while WRKY6-overexpression lines showed opposite phenotypes. A further investigation showed that WRKY6 regulated the expression of the AKT1 gene via directly binding to the W-box elements in its promoter through EMSA and ChIP-qPCR assays. A dual luciferase reporter analysis further demonstrated that WRKY6 enhanced the transcription of AKT1. Genetic analysis further revealed that the overexpression of AKT1 greatly rescued the short root phenotype of the wrky6 mutant under LK stress, suggesting AKT1 is epistatic to WRKY6 in the control of LK response. Further transcriptome profiling suggested that WRKY6 modulates LK response through a complex regulatory network. Thus, this study unveils a transcription factor that modulates root growth under potassium deficiency conditions by affecting the potassium channel gene AKT1 expression.
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Affiliation(s)
- Fangfang Niu
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Xing Cui
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Bo Yang
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Rui Wang
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Peiyu Zhao
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Xinjie Zhao
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Hanfeng Zhang
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Xiaojiang Fan
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Ye Li
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Michael K Deyholos
- Department of Biology, University of British Columbia, Okanagan Campus, Kelowna, V1V 1V7, Canada
| | - Yuan-Qing Jiang
- National Key Laboratory of Crop Improvement for Stress Tolerance and Production, College of Life Science, Northwest A&F University, Yangling, 712100, Shaanxi, China
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2
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Lan Y, Kuktaite R, Chawade A, Johansson E. Chasing high and stable wheat grain mineral content: Mining diverse spring genotypes under induced drought stress. PLoS One 2024; 19:e0298350. [PMID: 38359024 PMCID: PMC10868752 DOI: 10.1371/journal.pone.0298350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 01/23/2024] [Indexed: 02/17/2024] Open
Abstract
Climate change-induced drought has an effect on the nutritional quality of wheat. Here, the impact of drought at different plant stages on mineral content in mature wheat was evaluated in 30 spring-wheat lines of diverse backgrounds (modern, old and wheat-rye-introgressions). Genotypes with rye chromosome 3R introgression showed a high accumulation of several important minerals, including Zn and Fe, and these also showed stability across drought conditions. High Se content was found in genotypes with chromosome 1R. Old cultivars (K, Mg, Na, P and S) and 2R introgression lines (Fe, Ca, Mn, Mg and Na) demonstrated high mineral yield at early and late drought, respectively. Based on the low nutritional value often reported for modern wheat and negative climate effects on the stability of mineral content and yield, genes conferring high Zn/Fe, Se, and stable mineral yield under drought at various plant stages should be explicitly explored among 3R, 1R, old and 2R genotypes, respectively.
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Affiliation(s)
- Yuzhou Lan
- Department of Plant Breeding, The Swedish University of Agricultural Sciences, Lomma, Sweden
| | - Ramune Kuktaite
- Department of Plant Breeding, The Swedish University of Agricultural Sciences, Lomma, Sweden
| | - Aakash Chawade
- Department of Plant Breeding, The Swedish University of Agricultural Sciences, Lomma, Sweden
| | - Eva Johansson
- Department of Plant Breeding, The Swedish University of Agricultural Sciences, Lomma, Sweden
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3
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Tariq A, Zeng F, Graciano C, Ullah A, Sadia S, Ahmed Z, Murtaza G, Ismoilov K, Zhang Z. Regulation of Metabolites by Nutrients in Plants. PLANT IONOMICS 2023:1-18. [DOI: 10.1002/9781119803041.ch1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
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4
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Rapid Changes to Endomembrane System of Infected Root Nodule Cells to Adapt to Unusual Lifestyle. Int J Mol Sci 2023; 24:ijms24054647. [PMID: 36902077 PMCID: PMC10002930 DOI: 10.3390/ijms24054647] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 02/20/2023] [Accepted: 02/21/2023] [Indexed: 03/06/2023] Open
Abstract
Symbiosis between leguminous plants and soil bacteria rhizobia is a refined type of plant-microbial interaction that has a great importance to the global balance of nitrogen. The reduction of atmospheric nitrogen takes place in infected cells of a root nodule that serves as a temporary shelter for thousands of living bacteria, which, per se, is an unusual state of a eukaryotic cell. One of the most striking features of an infected cell is the drastic changes in the endomembrane system that occur after the entrance of bacteria to the host cell symplast. Mechanisms for maintaining intracellular bacterial colony represent an important part of symbiosis that have still not been sufficiently clarified. This review focuses on the changes that occur in an endomembrane system of infected cells and on the putative mechanisms of infected cell adaptation to its unusual lifestyle.
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Dabravolski SA, Isayenkov SV. Recent updates on the physiology and evolution of plant TPK/KCO channels. FUNCTIONAL PLANT BIOLOGY : FPB 2023; 50:17-28. [PMID: 36220140 DOI: 10.1071/fp22117] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Accepted: 09/21/2022] [Indexed: 06/16/2023]
Abstract
Plant vacuoles are the main cellular reservoirs to store K+ . The vacuolar K+ channels play a pivotal role in K+ exchange between cytosol and vacuolar sap. Among vacuolar K+ transporters, the Two Pore Potassium Channels (TPKs) are highly selective K+ channels present in most or all plant vacuoles and could be involved in various plant stress responses and developmental processes. Although the majority of TPK members have a vacuolar specialisation, some TPKs display different membrane localisation including the plasma membrane, tonoplast of protein storage vacuoles and probably chloroplast membranes. The functional properties as well as physiological roles of TPKs remains largely unexplored. In this review, we have collected recent data about the physiology, structure, functionality and evolution of TPK/KCO3 channels. We also critically evaluate the latest findings on the biological role, physiological functions, and regulation of TPK/KCO3 channels in relation to their structure and phylogenetic position. The possible role of TPK/KCO3 channels in plant tolerance to various abiotic stresses is summarised, and the future priority directions for TPK/KCO3 studies are addressed.
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Affiliation(s)
- Siarhei A Dabravolski
- Department of Biotechnology Engineering, ORT Braude College, Snunit 51, P.O. Box 78, Karmiel 2161002, Israel
| | - Stanislav V Isayenkov
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China; and Department of Plant Food Products and Biofortification, Institute of Food Biotechnology and Genomics NAS of Ukraine, Kyiv, Ukraine
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6
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Pang A, Rutter A, Bordenave S, Gainer A, Haack E, Zeeb B. Assessment of the toxicity of weathered petroleum hydrocarbon impacted soils to native plants from a site in the Canadian Subarctic. ECOTOXICOLOGY (LONDON, ENGLAND) 2022; 31:1287-1298. [PMID: 36125662 DOI: 10.1007/s10646-022-02585-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 09/06/2022] [Indexed: 06/15/2023]
Abstract
Remedial guidelines for petroleum hydrocarbons (PHCs) in soil aid in the mitigation of risks to human health and the environmental. However, some remediation guidelines may overestimate the potential for adverse effects to native plant species, contributing to unnecessary remedial efforts in attempts to meet the guidelines. At sites where PHC-contaminated soils undergo weathering, some PHCs may persist but with decreased bioavailability to organisms. In this study, the toxicity of both coarse and fine-grained subarctic soils, contaminated with weathered PHCs were assessed using five native plant species (Picea mariana, Achillea millefolium, Alnus viridis, Elymus trachycaulus and Salix bebbiana). Soil toxicity tests were conducted in a growth chamber with parameters set to simulate the site's subarctic climate conditions. Reference toxicant tests using boric acid were conducted to provide confidence in the interpretation of the results for the PHC-contaminated soils, and also provide new information on the sensitivities of the four boreal species to boric acid. All plants exhibited reduced growth and germination rates as boric acid concentrations increased. Despite exceeding the Canada-wide standard guidelines for Fraction 3 PHCs, field-collected contaminated soils had no significant negative impacts on the growth (i.e., length, dry weight and emergence) of any of the plant species tested.
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Affiliation(s)
- Adrian Pang
- School of Environmental Studies, Queen's University, Kingston, ON, K7L 3N6, Canada.
| | - Allison Rutter
- School of Environmental Studies, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - Sylvain Bordenave
- Trace Associates Incorporated, 37 Richard Way SW, Calgary, AB, T3E 7M8, Canada
| | - Amy Gainer
- Advisian (Worley Canada Services), 4811 87 Street NW, Edmonton, AB, T6E 0V3, Canada
| | - Elizabeth Haack
- Ecometrix Incorporated, 6800 Campobello Road, Mississauga, ON, L5N 2L8, Canada
| | - Barbara Zeeb
- Department of Chemistry and Chemical Engineering, Royal Military College of Canada, Kingston, ON, K7K 7B4, Canada
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D'Oria A, Courbet G, Billiot B, Jing L, Pluchon S, Arkoun M, Maillard A, Roux CP, Trouverie J, Etienne P, Diquélou S, Ourry A. Drought specifically downregulates mineral nutrition: Plant ionomic content and associated gene expression. PLANT DIRECT 2022; 6:e402. [PMID: 35949952 PMCID: PMC9356223 DOI: 10.1002/pld3.402] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Revised: 03/28/2022] [Accepted: 04/01/2022] [Indexed: 06/02/2023]
Abstract
One of the main limiting factors of plant yield is drought, and while the physiological responses to this environmental stress have been broadly described, research addressing its impact on mineral nutrition is scarce. Brassica napus and Triticum aestivum were subjected to moderate or severe water deficit, and their responses to drought were assessed by functional ionomic analysis, and derived calculation of the net uptake of 20 nutrients. While the uptake of most mineral nutrients decreased, Fe, Zn, Mn, and Mo uptake were impacted earlier and at a larger scale than most physiological parameters assessed (growth, ABA concentration, gas exchanges and photosynthetic activity). Additionally, in B. napus, the patterns of 183 differentially expressed genes in leaves related to the ionome (known ionomic genes, KIGs) or assumed to be involved in transport of a given nutrient were analyzed. This revealed three patterns of gene expression under drought consisting of up (transport of Cl and Co), down (transport of N, P, B, Mo, and Ni), or mixed levels (transport of S, Mg, K, Zn, Fe, Cu, or Mn) of regulation. The three patterns of gene regulations are discussed in relation to specific gene functions, changes of leaf ionomic composition and with consideration of the crosstalks that have been established between elements. It is suggested that the observed reduction in Fe uptake occurred via a specific response to drought, leading indirectly to reduced uptake of Zn and Mn, and these may be taken up by common transporters encoded by genes that were downregulated.
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Affiliation(s)
- Aurélien D'Oria
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Normandie Université, UNICAENINRAECaenFrance
- Laboratoire de Nutrition Végétale, Centre Mondial de l'InnovationLe Groupe RoullierSaint‐MaloFrance
| | - Galatéa Courbet
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Normandie Université, UNICAENINRAECaenFrance
| | - Bastien Billiot
- Laboratoire de Nutrition Végétale, Centre Mondial de l'InnovationLe Groupe RoullierSaint‐MaloFrance
| | - Lun Jing
- Laboratoire de Nutrition Végétale, Centre Mondial de l'InnovationLe Groupe RoullierSaint‐MaloFrance
| | - Sylvain Pluchon
- Laboratoire de Nutrition Végétale, Centre Mondial de l'InnovationLe Groupe RoullierSaint‐MaloFrance
| | - Mustapha Arkoun
- Laboratoire de Nutrition Végétale, Centre Mondial de l'InnovationLe Groupe RoullierSaint‐MaloFrance
| | - Anne Maillard
- Laboratoire de Nutrition Végétale, Centre Mondial de l'InnovationLe Groupe RoullierSaint‐MaloFrance
| | | | - Jacques Trouverie
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Normandie Université, UNICAENINRAECaenFrance
| | - Philippe Etienne
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Normandie Université, UNICAENINRAECaenFrance
| | - Sylvain Diquélou
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Normandie Université, UNICAENINRAECaenFrance
| | - Alain Ourry
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions N, C, S, Normandie Université, UNICAENINRAECaenFrance
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8
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Bashir SS, Hussain A, Hussain SJ, Wani OA, Zahid Nabi S, Dar NA, Baloch FS, Mansoor S. Plant drought stress tolerance: understanding its physiological, biochemical and molecular mechanisms. BIOTECHNOL BIOTEC EQ 2022. [DOI: 10.1080/13102818.2021.2020161] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022] Open
Affiliation(s)
- Sheikh Shanawaz Bashir
- Department of Botany, School of Chemical and Life Science, Jamia Hamdard University, New Delhi, India
| | - Anjuman Hussain
- Department of Botany, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
| | - Sofi Javed Hussain
- Department of Botany, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
| | - Owais Ali Wani
- Department of Soil Science, FoA, Wadura, Sopore, Sher-e-Kashmir University of Agricultural Sciences & Technology Shalimar Kashmir, Srinagar, Jammu and Kashmir, India
| | - Sheikh Zahid Nabi
- Division of Biochemistry, Faculty of Basic Sciences, Sher-e-Kashmir University of Agricultural Sciences and Technology, Jammu, India
| | - Niyaz A. Dar
- ARSSSS Pampore, Sher-e-Kashmir University of Agricultural Sciences and Technology, Shalimar Kashmir, Srinagar, Jammu and Kashmir, India
| | - Faheem Shehzad Baloch
- Department of Plant Protection, Faculty of Agricultural Sciences and Technologies, Sivas University of Science and Technology, Sivas, Turkey
| | - Sheikh Mansoor
- Division of Biochemistry, Faculty of Basic Sciences, Sher-e-Kashmir University of Agricultural Sciences and Technology, Jammu, India
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9
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Fitzpatrick TB, Noordally Z. Of clocks and coenzymes in plants: intimately connected cycles guiding central metabolism? THE NEW PHYTOLOGIST 2021; 230:416-432. [PMID: 33264424 DOI: 10.1111/nph.17127] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Accepted: 11/03/2020] [Indexed: 06/12/2023]
Abstract
Plant fitness is a measure of the capacity of a plant to survive and reproduce in its particular environment. It is inherently dependent on plant health. Molecular timekeepers like the circadian clock enhance fitness due to their ability to coordinate biochemical and physiological processes with the environment on a daily basis. Central metabolism underlies these events and it is well established that diel metabolite adjustments are intimately and reciprocally associated with the genetically encoded clock. Thus, metabolic pathway activities are time-of-day regulated. Metabolite rhythms are driven by enzymes, a major proportion of which rely on organic coenzymes to facilitate catalysis. The B vitamin complex is the key provider of coenzymes in all organisms. Emerging evidence suggests that B vitamin levels themselves undergo daily oscillations in animals but has not been studied in any depth in plants. Moreover, it is rarely considered that daily rhythmicity in coenzyme levels may dictate enzyme activity levels and therefore metabolite levels. Here we put forward the proposal that B-vitamin-derived coenzyme rhythmicity is intertwined with metabolic and clock derived rhythmicity to achieve a tripartite homeostasis integrated into plant fitness.
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Affiliation(s)
- Teresa B Fitzpatrick
- Vitamins and Environmental Stress Responses in Plants, Department of Botany and Plant Biology, University of Geneva, Geneva, 1211, Switzerland
| | - Zeenat Noordally
- Vitamins and Environmental Stress Responses in Plants, Department of Botany and Plant Biology, University of Geneva, Geneva, 1211, Switzerland
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10
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Sardans J, Peñuelas J. Potassium Control of Plant Functions: Ecological and Agricultural Implications. PLANTS (BASEL, SWITZERLAND) 2021; 10:419. [PMID: 33672415 PMCID: PMC7927068 DOI: 10.3390/plants10020419] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Revised: 02/18/2021] [Accepted: 02/21/2021] [Indexed: 02/06/2023]
Abstract
Potassium, mostly as a cation (K+), together with calcium (Ca2+) are the most abundant inorganic chemicals in plant cellular media, but they are rarely discussed. K+ is not a component of molecular or macromolecular plant structures, thus it is more difficult to link it to concrete metabolic pathways than nitrogen or phosphorus. Over the last two decades, many studies have reported on the role of K+ in several physiological functions, including controlling cellular growth and wood formation, xylem-phloem water content and movement, nutrient and metabolite transport, and stress responses. In this paper, we present an overview of contemporary findings associating K+ with various plant functions, emphasizing plant-mediated responses to environmental abiotic and biotic shifts and stresses by controlling transmembrane potentials and water, nutrient, and metabolite transport. These essential roles of K+ account for its high concentrations in the most active plant organs, such as leaves, and are consistent with the increasing number of ecological and agricultural studies that report K+ as a key element in the function and structure of terrestrial ecosystems, crop production, and global food security. We synthesized these roles from an integrated perspective, considering the metabolic and physiological functions of individual plants and their complex roles in terrestrial ecosystem functions and food security within the current context of ongoing global change. Thus, we provide a bridge between studies of K+ at the plant and ecological levels to ultimately claim that K+ should be considered at least at a level similar to N and P in terrestrial ecological studies.
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Affiliation(s)
- Jordi Sardans
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, 08913 Bellaterra, Catalonia, Spain;
- CREAF, 08913 Cerdanyola del Vallès, Catalonia, Spain
| | - Josep Peñuelas
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, 08913 Bellaterra, Catalonia, Spain;
- CREAF, 08913 Cerdanyola del Vallès, Catalonia, Spain
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11
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Potassium: A key modulator for cell homeostasis. J Biotechnol 2020; 324:198-210. [PMID: 33080306 DOI: 10.1016/j.jbiotec.2020.10.018] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2020] [Revised: 09/28/2020] [Accepted: 10/14/2020] [Indexed: 02/06/2023]
Abstract
Potassium (K) is the most vital and abundant macro element for the overall growth of plants and its deficiency or, excess concentration results in many diseases in plants. It is involved in regulation of many crucial roles in plant development. Depending on soil-root interactions, complex soil dynamics often results in unpredictable availability of the elements. Based on the importance index, K is considered to be the second only to nitrogen for the overall growth of plants. More than 60 enzymes within the plant system depend on K for its activation, in which K act as a key regulator. K helps plants to resist several abiotic and biotic stresses in the environment. We have reviewed the research progress about K's role in plants covering various important considerations of K highlighting the effects of microbes on soil K+; K and its contribution to adsorbed dose in plants; the importance of K+ deficiency; physiological functions of K+ transporters and channels; and interference of abiotic stressor in the regulatory role of K. This review further highlights the scope of future research regarding K.
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12
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Nieves-Cordones M, Rubio F, Santa-María GE. Editorial: Nutrient Use-Efficiency in Plants: An Integrative Approach. FRONTIERS IN PLANT SCIENCE 2020; 11:623976. [PMID: 33384709 PMCID: PMC7769762 DOI: 10.3389/fpls.2020.623976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 11/23/2020] [Indexed: 06/12/2023]
Affiliation(s)
- Manuel Nieves-Cordones
- Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura-CSIC, Murcia, Spain
| | - Francisco Rubio
- Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura-CSIC, Murcia, Spain
| | - Guillermo E. Santa-María
- Instituto Tecnológico Chascomús (INTECH), Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de San Martín, Buenos Aires, Argentina
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13
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Vega C, González G, Bahamonde HA, Valbuena-Carabaña M, Gil L, Fernández V. Effect of irradiation and canopy position on anatomical and physiological features of Fagus sylvatica and Quercus petraea leaves. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 152:232-242. [PMID: 32449682 DOI: 10.1016/j.plaphy.2020.05.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Revised: 05/07/2020] [Accepted: 05/08/2020] [Indexed: 06/11/2023]
Abstract
Growing conditions at different tree canopy positions may significantly vary and lead to foliar changes even within the same tree. An assessment of foliar anatomy, including also epidermal features, can help us understand how plants respond to environmental factors. Working with two model tree species (i.e., Quercus petraea and Fagus sylvatica) grown at their southernmost European distribution area in Central Spain, the influence of irradiation and canopy height was examined by sampling lower canopy leaves and comparing them with fully irradiated, top canopy leaves and shaded top canopy leaves grown for months within a bag made of shade netting fabric before they sprouted. At the end of the summer, samples were collected, and several parameters were analysed. The results indicate that SLA (specific leaf area) differences are significant both between species and groups. Leaf and cuticle thickness differed significantly between groups while stomatal densities only between species. Regarding mineral concentrations, differences between species were significant for K, Mn, N and N: P ratios. It is concluded that leaf responses to environmental conditions may be variable both within the same tree and between species.
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Affiliation(s)
- Clara Vega
- Departamento de Sistemas y Recursos Naturales, Universidad Politécnica de Madrid (UPM), Ciudad Universitaria s/n, 28040, Madrid, Spain
| | - Guillermo González
- Departamento de Sistemas y Recursos Naturales, Universidad Politécnica de Madrid (UPM), Ciudad Universitaria s/n, 28040, Madrid, Spain
| | - Héctor A Bahamonde
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, Diagonal 113 Nº 469, 1900, La Plata, Argentina
| | - María Valbuena-Carabaña
- Departamento de Sistemas y Recursos Naturales, Universidad Politécnica de Madrid (UPM), Ciudad Universitaria s/n, 28040, Madrid, Spain
| | - Luis Gil
- Departamento de Sistemas y Recursos Naturales, Universidad Politécnica de Madrid (UPM), Ciudad Universitaria s/n, 28040, Madrid, Spain
| | - Victoria Fernández
- Departamento de Sistemas y Recursos Naturales, Universidad Politécnica de Madrid (UPM), Ciudad Universitaria s/n, 28040, Madrid, Spain.
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14
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Pishva ZK, Amini-Dehaghi M, Bostani A, Naji AM. Biological and chemical nitrogen fertilizer impact on cumin ( Cuminum cyminum L) under different irrigation regimens. JOURNAL OF HERBMED PHARMACOLOGY 2020. [DOI: 10.34172/jhp.2020.27] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
Introduction: Water and nitrogen deficits are the most important limiting factors for plant growth and crop production in the world. Drought stress would be amplified by the global warming. Moreover, nitrogen scarcity is occurred in most arid and semi-arid areas. Cumin (Cuminum cyminum L.) is an important plant due to export benefits and low water demand. This study was aimed to evaluate nitrogen fertilizer effect on yield and some physiological characteristics of cumin under different irrigation regimens. Methods: The experiment was performed based on a split plot as randomized complete block design. Experiment treatments were irrigation regimens (field capacity, irrigation by draining 40% of soil water as middle stress, and irrigation by draining 80% of soil water as severe stress) and nitrogen fertilizers (60 kg ha-1 urea, 30 kg ha-1 urea, Nitroxin, and Nitroxin + 30 kg ha-1 urea). Results: Drought stress reduced cumin dry weight, seed yield, and chlorophyll content. In contrary, proline content, malondialdehyde (MDA) rate, phenol content, anthocyanin amount, and activity of catalase (CAT) and peroxidase (POX) increased by water stress. Increment urea use resulted in amending cumin growth and seed yield in the field capacity. Also, nitrogen use and raising its rate under the middle water stress caused to improve cumin drought tolerance. However, under the severe water stress, nitrogen application had not a significant impress on drought acclimation and seed yield. Conclusion: Nitroxin inoculation with use of 30 kg ha-1 urea was the most effective treatment to ameliorate seed yield and drought tolerance.
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Affiliation(s)
- Zeynab-Kobra Pishva
- Department of Agronomy and Plant Breeding, Faculty of Agriculture, Shahed University, Tehran, Iran
| | - Majid Amini-Dehaghi
- Department of Agronomy and Plant Breeding, Faculty of Agriculture, Shahed University, Tehran, Iran
| | - Amir Bostani
- Department of Soil Science, Faculty of Agriculture, Shahed University, Tehran, Iran
| | - Amir-Mohammad Naji
- Department of Agronomy and Plant Breeding, Faculty of Agriculture, Shahed University, Tehran, Iran
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15
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Sheng H, Cong DL, Ju HY. Functional Characterization of ZmHAK1 Promoter and Its Regulatory Transcription Factors in Maize. Mol Biol 2020. [DOI: 10.1134/s0026893320030152] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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16
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Multiple High-Affinity K + Transporters and ABC Transporters Involved in K + Uptake/Transport in the Potassium-Hyperaccumulator Plant Phytolacca acinosa Roxb. PLANTS 2020; 9:plants9040470. [PMID: 32276334 PMCID: PMC7238005 DOI: 10.3390/plants9040470] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Revised: 04/01/2020] [Accepted: 04/02/2020] [Indexed: 11/20/2022]
Abstract
Potassium is an important essential element for plant growth and development. Long-term potassium deprivation can lead to a severe deficiency phenotype in plants. Interestingly, Phytolacca acinosa is a plant with an unusually high potassium content and can grow well and complete its lifecycle even in severely potassium deficient soil. In this study, we found that its stems and leaves were the main tissues for high potassium accumulation, and P. acinosa showed a strong ability of K+ absorption in roots and a large capability of potassium accumulation in shoots. Analysis of plant growth and physiological characteristics indicated that P. acinosa had an adaptability in a wide range of external potassium levels. To reveal the mechanism of K+ uptake and transport in the potassium-hyperaccumulator plant P. acinosa, K+ uptake-/transport-related genes were screened by transcriptome sequencing, and their expression profiles were compared between K+ starved plants and normal cultured plants. Eighteen members of HAK/KT/KUPs, ten members of AKTs, and one member of HKT were identified in P. acinosa. Among them, six HAKs, and two AKTs and PaHKT1 showed significantly different expression. These transporters might be coordinatively involved in K+ uptake/transport in P. acinosa and lead to high potassium accumulation in plant tissues. In addition, significantly changed expression of some ABC transporters indicated that ABC transporters might be important for K+ uptake and transport in P. acinosa under low K+ concentrations.
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17
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Dikšaitytė A, Viršilė A, Žaltauskaitė J, Januškaitienė I, Praspaliauskas M, Pedišius N. Do plants respond and recover from a combination of drought and heatwave in the same manner under adequate and deprived soil nutrient conditions? PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 291:110333. [PMID: 31928679 DOI: 10.1016/j.plantsci.2019.110333] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Revised: 10/25/2019] [Accepted: 11/03/2019] [Indexed: 06/10/2023]
Abstract
Extreme climatic conditions with extended drought periods and heatwaves are predicted to increase in frequency and severity in many regions of the world. Aside from this, other abiotic stress factors such as nutrient deficiency could pose a serious problem to plants when combined with other stressors resulting in more complex underpinning mechanisms. In the present study, we evaluated the response of Brassica napus to single and combined impacts of drought and heatwave (HW) under adequate or deprived (N-A and N-D) soil nutrient conditions. In addition, to get better insights in the plant response to combined stress, a post-stress period, pointing out a degree of the recovery after the cessation of stress, was also included. The results showed a different manner of single drought and heatwave action. The adverse effect of drought on leaf gas exchange was lagged on the growth and became more apparent only after recovery period with no obvious difference between different nutrient levels. Contrary, the growth response of nutrient-deprived plants to single HW was weak and in most cases, insignificant. Heatwave applied simultaneously with drought highly exacerbated the adverse effect of drought both under N-A and N-D conditions. Combined drought and heatwave stress resulted in the sharper decline of Asat and it was attributed to both stomatal and non-stomatal limitations. Interestingly, plants underwent combined drought and HW treatment under N-D conditions showed better aboveground growth recovery, compared to those grown under N-A conditions, while displayed far more diminished photochemistry of photosystem II and badly disturbed the C/N balance. This discrepancy came from the fact that soil nutrient deficiency, by itself, evoked strong stress under control climate conditions resulting in a dramatically slower aboveground growth of nutrient-deprived plant. In turn, although combined drought and HW stress had similar effect on the aboveground growth either under N-A or N-D conditions, the recovery of later one was better. These results highlight the necessity to look at plants' performance under unfavorable environmental conditions beyond the actual event, since it can be depended not only on the duration of exposure but also on the legacy effect after treatment.
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Affiliation(s)
- Austra Dikšaitytė
- Institute of Horticulture, Lithuanian Research Centre for Agriculture and Forestry, Kauno St. 30, LT-54333, Babtai, Kaunas Distr., Lithuania; Department of Environmental Sciences, Faculty of Natural Sciences, Vytautas Magnus University, Vileikos St. 8, LT-44404, Kaunas, Lithuania.
| | - Akvilė Viršilė
- Institute of Horticulture, Lithuanian Research Centre for Agriculture and Forestry, Kauno St. 30, LT-54333, Babtai, Kaunas Distr., Lithuania
| | - Jūratė Žaltauskaitė
- Department of Environmental Sciences, Faculty of Natural Sciences, Vytautas Magnus University, Vileikos St. 8, LT-44404, Kaunas, Lithuania
| | - Irena Januškaitienė
- Department of Environmental Sciences, Faculty of Natural Sciences, Vytautas Magnus University, Vileikos St. 8, LT-44404, Kaunas, Lithuania
| | - Marius Praspaliauskas
- Lithuanian Energy Institute, Laboratory of Heat-Equipment Research and Testing, Breslaujos St. 3, LT-44403, Kaunas, Lithuania
| | - Nerijus Pedišius
- Lithuanian Energy Institute, Laboratory of Heat-Equipment Research and Testing, Breslaujos St. 3, LT-44403, Kaunas, Lithuania
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18
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Buet A, Galatro A, Ramos-Artuso F, Simontacchi M. Nitric oxide and plant mineral nutrition: current knowledge. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4461-4476. [PMID: 30903155 DOI: 10.1093/jxb/erz129] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 03/14/2019] [Indexed: 05/20/2023]
Abstract
Plants under conditions of essential mineral deficiency trigger signaling mechanisms that involve common components. Among these components, nitric oxide (NO) has been identified as a key participant in responses to changes in nutrient availability. Usually, nutrient imbalances affect the levels of NO in specific plant tissues, via modification of its rate of synthesis or degradation. Changes in the level of NO affect plant morphology and/or trigger responses associated with nutrient homeostasis, mediated by its interaction with reactive oxygen species, phytohormones, and through post-translational modification of proteins. NO-related events constitute an exciting field of research to understand how plants adapt and respond to conditions of nutrient shortage. This review summarizes the current knowledge on NO as a component of the multiple processes related to plant performance under conditions of deficiency in mineral nutrients, focusing on macronutrients such as nitrogen, phosphate, potassium, and magnesium, as well as micronutrients such as iron and zinc.
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Affiliation(s)
- Agustina Buet
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, La Plata, Argentina
| | - Andrea Galatro
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
| | - Facundo Ramos-Artuso
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, La Plata, Argentina
| | - Marcela Simontacchi
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, La Plata, Argentina
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19
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Zuluaga DL, Sonnante G. The Use of Nitrogen and Its Regulation in Cereals: Structural Genes, Transcription Factors, and the Role of miRNAs. PLANTS 2019; 8:plants8080294. [PMID: 31434274 PMCID: PMC6724420 DOI: 10.3390/plants8080294] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/05/2019] [Revised: 08/15/2019] [Accepted: 08/16/2019] [Indexed: 01/31/2023]
Abstract
Cereals and, especially, rice, maize, and wheat, are essential commodities, on which human nutrition is based. Expanding population and food demand have required higher production which has been achieved by increasing fertilization, and especially nitrogen supply to cereal crops. In fact, nitrogen is a crucial nutrient for the plant, but excessive use poses serious environmental and health issues. Therefore, increasing nitrogen use efficiency in cereals is of pivotal importance for sustainable agriculture. The main steps in the use of nitrogen are uptake and transport, reduction and assimilation, and translocation and remobilization. Many studies have been carried out on the genes involved in these phases, and on transcription factors regulating these genes. Lately, increasing attention has been paid to miRNAs responding to abiotic stress, including nutrient deficiency. Many miRNAs have been found to regulate transcription factors acting on the expression of specific genes for nitrogen uptake or remobilization. Recent studies on gene regulatory networks have also demonstrated that miRNAs can interact with several nodes in the network, functioning as key regulators in nitrogen metabolism.
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Affiliation(s)
- Diana L Zuluaga
- Institute of Biosciences and Bioresources, National Research Council, Via Amendola 165/A, 70126 Bari, Italy.
| | - Gabriella Sonnante
- Institute of Biosciences and Bioresources, National Research Council, Via Amendola 165/A, 70126 Bari, Italy.
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20
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Watanabe M, Hoefgen R. Sulphur systems biology-making sense of omics data. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4155-4170. [PMID: 31404467 PMCID: PMC6698701 DOI: 10.1093/jxb/erz260] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Accepted: 05/24/2019] [Indexed: 05/22/2023]
Abstract
Systems biology approaches have been applied over the last two decades to study plant sulphur metabolism. These 'sulphur-omics' approaches have been developed in parallel with the advancing field of systems biology, which is characterized by permanent improvements of high-throughput methods to obtain system-wide data. The aim is to obtain a holistic view of sulphur metabolism and to generate models that allow predictions of metabolic and physiological responses. Besides known sulphur-responsive genes derived from previous studies, numerous genes have been identified in transcriptomics studies. This has not only increased our knowledge of sulphur metabolism but has also revealed links between metabolic processes, thus indicating a previously unexpected complex interconnectivity. The identification of response and control networks has been supported through metabolomics and proteomics studies. Due to the complex interlacing nature of biological processes, experimental validation using targeted or systems approaches is ongoing. There is still room for improvement in integrating the findings from studies of metabolomes, proteomes, and metabolic fluxes into a single unifying concept and to generate consistent models. We therefore suggest a joint effort of the sulphur research community to standardize data acquisition. Furthermore, focusing on a few different model plant systems would help overcome the problem of fragmented data, and would allow us to provide a standard data set against which future experiments can be designed and compared.
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Affiliation(s)
- Mutsumi Watanabe
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
- Nara Institute of Science and Technology, Ikoma, Japan
| | - Rainer Hoefgen
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
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21
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Vishwakarma K, Mishra M, Patil G, Mulkey S, Ramawat N, Pratap Singh V, Deshmukh R, Kumar Tripathi D, Nguyen HT, Sharma S. Avenues of the membrane transport system in adaptation of plants to abiotic stresses. Crit Rev Biotechnol 2019; 39:861-883. [DOI: 10.1080/07388551.2019.1616669] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Kanchan Vishwakarma
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Prayagraj, India
| | - Mitali Mishra
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Prayagraj, India
| | - Gunvant Patil
- Department of Agronomy and Plant Genetics, University of Minnesota St. Paul, Minnesota, MN, USA
| | - Steven Mulkey
- Department of Agronomy and Plant Genetics, University of Minnesota St. Paul, Minnesota, MN, USA
| | - Naleeni Ramawat
- Amity Institute of Organic Agriculture, Amity University, Uttar Pradesh, Noida, India
| | - Vijay Pratap Singh
- Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Allahabad, India
| | - Rupesh Deshmukh
- National Agri-Food Biotechnology Institute (NABI), Mohali, India
| | | | - Henry T. Nguyen
- Department of Agronomy and Plant Genetics, University of Minnesota St. Paul, Minnesota, MN, USA
| | - Shivesh Sharma
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Prayagraj, India
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22
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High External K + Concentrations Impair Pi Nutrition, Induce the Phosphate Starvation Response, and Reduce Arsenic Toxicity in Arabidopsis Plants. Int J Mol Sci 2019; 20:ijms20092237. [PMID: 31067662 PMCID: PMC6539835 DOI: 10.3390/ijms20092237] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Revised: 04/30/2019] [Accepted: 05/03/2019] [Indexed: 01/30/2023] Open
Abstract
Potassium (K+) and phosphorous (Pi) are two of the most important nutrients required by plants and there is an interest in studying how they are acquired. Most studies have focused on the characterization of the mechanisms involved in K+ and Pi uptake and their distribution within the plants, as well as the regulatory mechanisms involved. Evidence is emerging which points to interactions in the nutrition of different nutrients and to the existence of crosstalk in the signaling cascades regulating their acquisition. However, the interaction between K+ and Pi has been scarcely studied. Here we show that high concentrations of K+ in the external solution inhibit Pi uptake and impair Pi nutrition in Arabidopsis plants, resulting in the induction of phosphate starvation response (PSR) and the upregulation of genes encoding root phosphate uptake systems. The high K+-induced PSR depends on the PHR1 and PHL1 transcription factors that are key pieces of Pi signaling in Arabidopsis. Importantly, high K+ reduces arsenic accumulation in plants and its toxic effects. The results presented may help to design strategies to reduce Pi deficiency as well as the accumulation of arsenic in crops.
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23
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Podda A, Pisuttu C, Hoshika Y, Pellegrini E, Carrari E, Lorenzini G, Nali C, Cotrozzi L, Zhang L, Baraldi R, Neri L, Paoletti E. Can nutrient fertilization mitigate the effects of ozone exposure on an ozone-sensitive poplar clone? THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 657:340-350. [PMID: 30550899 DOI: 10.1016/j.scitotenv.2018.11.459] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2018] [Revised: 11/28/2018] [Accepted: 11/29/2018] [Indexed: 06/09/2023]
Abstract
We tested the independent and interactive effects of nitrogen (N; 0 and 80 kg ha-1), phosphorus (P; 0, 40 and 80 kg ha-1), and ozone (O3) application/exposure [ambient concentration (AA), 1.5 × AA and 2.0 × AA] for five consecutive months on biochemical traits of the O3-sensitive Oxford poplar clone. Plants exposed to O3 showed visible injury and an alteration of membrane integrity, as confirmed by the malondialdehyde by-product accumulation (+3 and +17% under 1.5 × AA and 2.0 × AA conditions, in comparison to AA). This was probably due to O3-induced oxidative damage, as documented by the production of superoxide anion radical (O2-, +27 and +63%, respectively). Ozone per se, independently from the concentrations, induced multiple signals (e.g., alteration of cellular redox state, increase of abscisic acid/indole-3-acetic acid ratio and reduction of proline content) that might be part of premature leaf senescence processes. By contrast, nutrient fertilization (both N and P) reduced reactive oxygen species accumulation (as confirmed by the decreased O2- and hydrogen peroxide content), resulting in enhanced membrane stability. This was probably due to the simultaneous involvement of antioxidant compounds (e.g., carotenoids, ascorbate and glutathione) and osmoprotectants (e.g., proline) that regulate the detoxification processes of coping with oxidative stress by reducing the O3 sensitivity of Oxford clone. These mitigation effects were effective only under AA and 1.5 × AA conditions. Nitrogen and P supply activated a free radical scavenging system that was not able to delay leaf senescence and mitigate the adverse effects of a general peroxidation due to the highest O3 concentrations.
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Affiliation(s)
- Alessandra Podda
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; Institute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Claudia Pisuttu
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Yasutomo Hoshika
- Institute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Elisa Pellegrini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Center for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy.
| | - Elisa Carrari
- Institute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Giacomo Lorenzini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Center for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Cristina Nali
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Center for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Lorenzo Cotrozzi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Lu Zhang
- Institute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy; College of Horticulture and Landscape Architecture, Northeast Agricultural University, Changjiang Road 600, Harbin 150030, China
| | - Rita Baraldi
- Institute of Biometeorology, National Research Council, Via P. Gobetti 101, Bologna 40129, Italy
| | - Luisa Neri
- Institute of Biometeorology, National Research Council, Via P. Gobetti 101, Bologna 40129, Italy
| | - Elena Paoletti
- Institute for Sustainable Plant Protection, National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
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24
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Nieves-Cordones M, Ródenas R, Lara A, Martínez V, Rubio F. The combination of K + deficiency with other environmental stresses: What is the outcome? PHYSIOLOGIA PLANTARUM 2019; 165:264-276. [PMID: 30187486 DOI: 10.1111/ppl.12827] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 07/19/2018] [Accepted: 08/31/2018] [Indexed: 05/25/2023]
Abstract
Potassium (K+ ) is a macronutrient known for its high mobility and positive charge, which allows efficient and fast control of the electrical balance and osmotic potential in plant cells. Such features allow K+ to remarkably contribute to plant stress adaptation. Some agricultural lands are deficient in K+ , imposing a stress that reduces crop yield and makes fertilization a common practice. However, individual stress conditions in the field are rare, and crops usually face a combination of different stresses. As plant response to a stress combination cannot always be deduced from individual stress action, it is necessary to gain insights into the specific mechanisms that connect K+ homeostasis with other stress effects to improve plant performance in the context of climate change. Surprisingly, plant responses to environmental stresses under a K+ -limiting scenario are poorly understood. In the present review, we summarize current knowledge and find substantial gaps regarding specific outcomes of K+ deficiency in addition to other environmental stresses. In this regard, combined nutrient deficiencies of K+ and other macronutrients are covered in the first part of the review and interactions arising from K+ deficiency with salinity, drought and biotic factors in the second part. Information available so far suggests a prominent role of potassium and nitrate transport systems and their regulatory proteins in the response of plants to several stress combinations. Thus, such molecular pathways, which are located at the crossroad between K+ homeostasis and environmental stresses, could be considered biotechnological targets in future studies.
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Affiliation(s)
| | - Reyes Ródenas
- Departamento de Nutrición Vegetal, CEBAS-CSIC, 30100 Murcia, Spain
| | - Alberto Lara
- Departamento de Nutrición Vegetal, CEBAS-CSIC, 30100 Murcia, Spain
| | - Vicente Martínez
- Departamento de Nutrición Vegetal, CEBAS-CSIC, 30100 Murcia, Spain
| | - Francisco Rubio
- Departamento de Nutrición Vegetal, CEBAS-CSIC, 30100 Murcia, Spain
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25
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Nitrate transporter NPF7.3/NRT1.5 plays an essential role in regulating phosphate deficiency responses in Arabidopsis. Biochem Biophys Res Commun 2019; 508:314-319. [DOI: 10.1016/j.bbrc.2018.11.118] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2018] [Accepted: 11/19/2018] [Indexed: 11/21/2022]
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26
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Lefoulon C, Waghmare S, Karnik R, Blatt MR. Gating control and K + uptake by the KAT1 K + channel leaveraged through membrane anchoring of the trafficking protein SYP121. PLANT, CELL & ENVIRONMENT 2018; 41:2668-2677. [PMID: 29940699 PMCID: PMC6220998 DOI: 10.1111/pce.13392] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2018] [Revised: 06/19/2018] [Accepted: 06/19/2018] [Indexed: 05/20/2023]
Abstract
Vesicle traffic is tightly coordinated with ion transport for plant cell expansion through physical interactions between subsets of vesicle-trafficking (so-called SNARE) proteins and plasma membrane Kv channels, including the archetypal inward-rectifying K+ channel, KAT1 of Arabidopsis. Ion channels open and close rapidly over milliseconds, whereas vesicle fusion events require many seconds. Binding has been mapped to conserved motifs of both the Kv channels and the SNAREs, but knowledge of the temporal kinetics of their interactions, especially as it might relate to channel gating and its coordination with vesicle fusion remains unclear. Here, we report that the SNARE SYP121 promotes KAT1 gating through a persistent interaction that alters the stability of the channel, both in its open and closed states. We show, too, that SYP121 action on the channel open state requires SNARE anchoring in the plasma membrane. Our findings indicate that SNARE binding confers a conformational bias that encompasses the microscopic kinetics of channel gating, with leverage applied through the SNARE anchor in favour of the open channel.
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Affiliation(s)
- Cécile Lefoulon
- Laboratory of Plant Physiology and Biophysics, Bower BuildingUniversity of GlasgowGlasgowUK
| | - Sakharam Waghmare
- Laboratory of Plant Physiology and Biophysics, Bower BuildingUniversity of GlasgowGlasgowUK
| | - Rucha Karnik
- Laboratory of Plant Physiology and Biophysics, Bower BuildingUniversity of GlasgowGlasgowUK
| | - Michael R. Blatt
- Laboratory of Plant Physiology and Biophysics, Bower BuildingUniversity of GlasgowGlasgowUK
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27
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Zhao C, Haigh AM, Holford P, Chen ZH. Roles of Chloroplast Retrograde Signals and Ion Transport in Plant Drought Tolerance. Int J Mol Sci 2018; 19:E963. [PMID: 29570668 PMCID: PMC5979362 DOI: 10.3390/ijms19040963] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Revised: 03/18/2018] [Accepted: 03/20/2018] [Indexed: 01/09/2023] Open
Abstract
Worldwide, drought affects crop yields; therefore, understanding plants' strategies to adapt to drought is critical. Chloroplasts are key regulators of plant responses, and signals from chloroplasts also regulate nuclear gene expression during drought. However, the interactions between chloroplast-initiated retrograde signals and ion channels under stress are still not clear. In this review, we summarise the retrograde signals that participate in regulating plant stress tolerance. We compare chloroplastic transporters that modulate retrograde signalling through retrograde biosynthesis or as critical components in retrograde signalling. We also discuss the roles of important plasma membrane and tonoplast ion transporters that are involved in regulating stomatal movement. We propose how retrograde signals interact with ion transporters under stress.
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Affiliation(s)
- Chenchen Zhao
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Anthony M Haigh
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Paul Holford
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia.
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28
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Aslam R, Williams LE, Bhatti MF, Virk N. Genome-wide analysis of wheat calcium ATPases and potential role of selected ACAs and ECAs in calcium stress. BMC PLANT BIOLOGY 2017; 17:174. [PMID: 29078753 PMCID: PMC5658947 DOI: 10.1186/s12870-017-1112-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2017] [Accepted: 10/09/2017] [Indexed: 05/02/2023]
Abstract
BACKGROUND P2- type calcium ATPases (ACAs-auto inhibited calcium ATPases and ECAs-endoplasmic reticulum calcium ATPases) belong to the P- type ATPase family of active membrane transporters and are significantly involved in maintaining accurate levels of Ca2+, Mn2+ and Zn2+ in the cytosol as well as playing a very important role in stress signaling, stomatal opening and closing and pollen tube growth. Here we report the identification and possible role of some of these ATPases from wheat. RESULTS In this study, ACA and ECA sequences of six species (belonging to Poaceae) were retrieved from different databases and a phylogenetic tree was constructed. A high degree of evolutionary relatedness was observed among P2 sequences characterized in this study. Members of the respective groups from different plant species were observed to fall under the same clade. This pattern highlights the common ancestry of P2- type calcium ATPases. Furthermore, qRT-PCR was used to analyse the expression of selected ACAs and ECAs from Triticum aestivum (wheat) under calcium toxicity and calcium deficiency. The data indicated that expression of ECAs is enhanced under calcium stress, suggesting possible roles of these ATPases in calcium homeostasis in wheat. Similarly, the expression of ACAs was significantly different in plants grown under calcium stress as compared to plants grown under control conditions. This gives clues to the role of ACAs in signal transduction during calcium stress in wheat. CONCLUSION Here we concluded that wheat genome consists of nine P2B and three P2A -type calcium ATPases. Moreover, gene loss events in wheat ancestors lead to the loss of a particular homoeolog of a gene in wheat. To elaborate the role of these wheat ATPases, qRT-PCR was performed. The results indicated that when plants are exposed to calcium stress, both P2A and P2B gene expression get enhanced. This further gives clues about the possible role of these ATPases in wheat in calcium management. These findings can be useful in future for genetic manipulations as well as in wheat genome annotation process.
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Affiliation(s)
- Roohi Aslam
- Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, 44000 Pakistan
| | | | - Muhammad Faraz Bhatti
- Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, 44000 Pakistan
| | - Nasar Virk
- Atta-ur-Rahman School of Applied Biosciences, National University of Sciences and Technology, Islamabad, 44000 Pakistan
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29
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Ródenas R, García-Legaz MF, López-Gómez E, Martínez V, Rubio F, Ángeles Botella M. NO 3- , PO 43- and SO 42- deprivation reduced LKT1-mediated low-affinity K + uptake and SKOR-mediated K + translocation in tomato and Arabidopsis plants. PHYSIOLOGIA PLANTARUM 2017; 160:410-424. [PMID: 28244226 DOI: 10.1111/ppl.12558] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Revised: 02/02/2017] [Accepted: 02/09/2017] [Indexed: 05/27/2023]
Abstract
Regulation of essential macronutrients acquisition by plants in response to their availability is a key process for plant adaptation to changing environments. Here we show in tomato and Arabidopsis plants that when they are subjected to NO3- , PO43- and SO42- deprivation, low-affinity K+ uptake and K+ translocation to the shoot are reduced. In parallel, these nutritional deficiencies produce reductions in the messenger levels of the genes encoding the main systems for low-affinity K+ uptake and K+ translocation, i.e. AKT1 and SKOR in Arabidopsis and LKT1 and the tomato homolog of SKOR, SlSKOR in tomato, respectively. The results suggest that the shortage of one nutrient produces a general downregulation of the acquisition of other nutrients. In the case of K+ nutrient, one of the mechanisms for such a response resides in the transcriptional repression of the genes encoding the systems for K+ uptake and translocation.
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Affiliation(s)
- Reyes Ródenas
- Departamento de Nutrición Vegetal, CEBAS-CSIC, Murcia, 30100, Spain
| | | | - Elvira López-Gómez
- Departamento de Agroquímica y Medioambiente, Universidad Miguel Hernández, Alicante, 03312, Spain
| | - Vicente Martínez
- Departamento de Nutrición Vegetal, CEBAS-CSIC, Murcia, 30100, Spain
| | - Francisco Rubio
- Departamento de Nutrición Vegetal, CEBAS-CSIC, Murcia, 30100, Spain
| | - M Ángeles Botella
- Departamento de Biología Aplicada, Universidad Miguel Hernández, Alicante, 03312, Spain
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30
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Moschen S, Di Rienzo JA, Higgins J, Tohge T, Watanabe M, González S, Rivarola M, García-García F, Dopazo J, Hopp HE, Hoefgen R, Fernie AR, Paniego N, Fernández P, Heinz RA. Integration of transcriptomic and metabolic data reveals hub transcription factors involved in drought stress response in sunflower (Helianthus annuus L.). PLANT MOLECULAR BIOLOGY 2017; 94:549-564. [PMID: 28639116 DOI: 10.1007/s11103-017-0625-5] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2017] [Accepted: 06/12/2017] [Indexed: 05/19/2023]
Abstract
By integration of transcriptional and metabolic profiles we identified pathways and hubs transcription factors regulated during drought conditions in sunflower, useful for applications in molecular and/or biotechnological breeding. Drought is one of the most important environmental stresses that effects crop productivity in many agricultural regions. Sunflower is tolerant to drought conditions but the mechanisms involved in this tolerance remain unclear at the molecular level. The aim of this study was to characterize and integrate transcriptional and metabolic pathways related to drought stress in sunflower plants, by using a system biology approach. Our results showed a delay in plant senescence with an increase in the expression level of photosynthesis related genes as well as higher levels of sugars, osmoprotectant amino acids and ionic nutrients under drought conditions. In addition, we identified transcription factors that were upregulated during drought conditions and that may act as hubs in the transcriptional network. Many of these transcription factors belong to families implicated in the drought response in model species. The integration of transcriptomic and metabolomic data in this study, together with physiological measurements, has improved our understanding of the biological responses during droughts and contributes to elucidate the molecular mechanisms involved under this environmental condition. These findings will provide useful biotechnological tools to improve stress tolerance while maintaining crop yield under restricted water availability.
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Affiliation(s)
- Sebastián Moschen
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Ciudad Autónoma de Buenos Aires, Argentina
| | - Julio A Di Rienzo
- Facultad de Ciencias Agropecuarias, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - Janet Higgins
- Earlham Institute, Norwich Research Park, Norwich, NR4 7UZ, UK
| | - Takayuki Tohge
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany
| | - Mutsumi Watanabe
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany
| | - Sergio González
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Ciudad Autónoma de Buenos Aires, Argentina
| | - Máximo Rivarola
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Ciudad Autónoma de Buenos Aires, Argentina
| | - Francisco García-García
- Computational Genomics Department, Centro de Investigación Príncipe Felipe. Functional Genomics Node (INB-ELIXIR-es). Bioinformatics in Rare Diseases (BiER), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Valencia, 46012, Spain
| | - Joaquin Dopazo
- Computational Genomics Department, Centro de Investigación Príncipe Felipe. Functional Genomics Node (INB-ELIXIR-es). Bioinformatics in Rare Diseases (BiER), Centro de Investigación Biomédica en Red de Enfermedades Raras (CIBERER), Valencia, 46012, Spain
| | - H Esteban Hopp
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina
- Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Autónoma de Buenos Aires, Argentina
| | - Rainer Hoefgen
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany
| | - Alisdair R Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Potsdam-Golm, Germany
| | - Norma Paniego
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Ciudad Autónoma de Buenos Aires, Argentina
| | - Paula Fernández
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas, Ciudad Autónoma de Buenos Aires, Argentina
- Escuela de Ciencia y Tecnología, Universidad Nacional de San Martín, San Martín, Buenos Aires, Argentina
| | - Ruth A Heinz
- Instituto de Biotecnología, Centro de Investigaciones en Ciencias Agronómicas y Veterinarias, Instituto Nacional de Tecnología Agropecuaria, Hurlingham, Buenos Aires, Argentina.
- Consejo Nacional de Investigaciones Científicas y Técnicas, Ciudad Autónoma de Buenos Aires, Argentina.
- Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Autónoma de Buenos Aires, Argentina.
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31
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Sharma D, Jamra G, Singh UM, Sood S, Kumar A. Calcium Biofortification: Three Pronged Molecular Approaches for Dissecting Complex Trait of Calcium Nutrition in Finger Millet ( Eleusine coracana) for Devising Strategies of Enrichment of Food Crops. FRONTIERS IN PLANT SCIENCE 2017; 7:2028. [PMID: 28144246 PMCID: PMC5239788 DOI: 10.3389/fpls.2016.02028] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2016] [Accepted: 12/19/2016] [Indexed: 05/07/2023]
Abstract
Calcium is an essential macronutrient for plants and animals and plays an indispensable role in structure and signaling. Low dietary intake of calcium in humans has been epidemiologically linked to various diseases which can have serious health consequences over time. Major staple food-grains are poor source of calcium, however, finger millet [Eleusine coracana (L.) Gaertn.], an orphan crop has an immense potential as a nutritional security crop due to its exceptionally high calcium content. Understanding the existing genetic variation as well as molecular mechanisms underlying the uptake, transport, accumulation of calcium ions (Ca2+) in grains is of utmost importance for development of calcium bio-fortified crops. In this review, we have discussed molecular mechanisms involved in calcium accumulation and transport thoroughly, emphasized the role of molecular breeding, functional genomics and transgenic approaches to understand the intricate mechanism of calcium nutrition in finger millet. The objective is to provide a comprehensive up to date account of molecular mechanisms regulating calcium nutrition and highlight the significance of bio-fortification through identification of potential candidate genes and regulatory elements from finger millet to alleviate calcium malnutrition. Hence, finger millet could be used as a model system for explaining the mechanism of elevated calcium (Ca2+) accumulation in its grains and could pave way for development of nutraceuticals or designer crops.
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Affiliation(s)
- Divya Sharma
- Department of Molecular Biology and Genetic Engineering, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and TechnologyPantnagar, India
| | - Gautam Jamra
- Department of Molecular Biology and Genetic Engineering, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and TechnologyPantnagar, India
| | - Uma M. Singh
- International Rice Research Institute Division, International Crops Research Institute for the Semi-Arid TropicsPatancheru, India
| | - Salej Sood
- Indian Council of Agricultural Research-Vivekananda Institute of Hill AgricultureAlmora, India
| | - Anil Kumar
- Department of Molecular Biology and Genetic Engineering, College of Basic Sciences and Humanities, Govind Ballabh Pant University of Agriculture and TechnologyPantnagar, India
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Karnik R, Waghmare S, Zhang B, Larson E, Lefoulon C, Gonzalez W, Blatt MR. Commandeering Channel Voltage Sensors for Secretion, Cell Turgor, and Volume Control. TRENDS IN PLANT SCIENCE 2017; 22:81-95. [PMID: 27818003 PMCID: PMC5224186 DOI: 10.1016/j.tplants.2016.10.006] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2016] [Revised: 10/06/2016] [Accepted: 10/07/2016] [Indexed: 05/20/2023]
Abstract
Control of cell volume and osmolarity is central to cellular homeostasis in all eukaryotes. It lies at the heart of the century-old problem of how plants regulate turgor, mineral and water transport. Plants use strongly electrogenic H+-ATPases, and the substantial membrane voltages they foster, to drive solute accumulation and generate turgor pressure for cell expansion. Vesicle traffic adds membrane surface and contributes to wall remodelling as the cell grows. Although a balance between vesicle traffic and ion transport is essential for cell turgor and volume control, the mechanisms coordinating these processes have remained obscure. Recent discoveries have now uncovered interactions between conserved subsets of soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) proteins that drive the final steps in secretory vesicle traffic and ion channels that mediate in inorganic solute uptake. These findings establish the core of molecular links, previously unanticipated, that coordinate cellular homeostasis and cell expansion.
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Affiliation(s)
- Rucha Karnik
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Sakharam Waghmare
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Ben Zhang
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Emily Larson
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Cécile Lefoulon
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Wendy Gonzalez
- Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile
| | - Michael R Blatt
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK.
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33
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Limited phosphorus availability is the Achilles heel of tropical reef corals in a warming ocean. Sci Rep 2016; 6:31768. [PMID: 27531136 PMCID: PMC4987665 DOI: 10.1038/srep31768] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2016] [Accepted: 07/27/2016] [Indexed: 12/04/2022] Open
Abstract
During the 20th century, seawater temperatures have significantly increased, leading to profound alterations in biogeochemical cycles and ecosystem processes. Elevated temperatures have also caused massive bleaching (symbiont/pigment loss) of autotrophic symbioses, such as in coral-dinoflagellate association. As symbionts provide most nutrients to the host, their expulsion during bleaching induces host starvation. However, with the exception of carbon, the nutritional impact of bleaching on corals is still unknown, due to the poorly understood requirements in inorganic nutrients during stress. We therefore assessed the uptake rates of nitrogen and phosphate by five coral species maintained under normal and thermal stress conditions. Our results showed that nitrogen acquisition rates were significantly reduced during thermal stress, while phosphorus uptake rates were significantly increased in most species, suggesting a key role of this nutrient. Additional experiments showed that during thermal stress, phosphorus was required to maintain symbiont density and photosynthetic rates, as well as to enhance the translocation and retention of carbon within the host tissue. These findings shed new light on the interactions existing between corals and inorganic nutrients during thermal stress, and highlight the importance of phosphorus for symbiont health.
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Gutierrez-Carbonell E, Takahashi D, Lüthje S, González-Reyes JA, Mongrand S, Contreras-Moreira B, Abadía A, Uemura M, Abadía J, López-Millán AF. A Shotgun Proteomic Approach Reveals That Fe Deficiency Causes Marked Changes in the Protein Profiles of Plasma Membrane and Detergent-Resistant Microdomain Preparations from Beta vulgaris Roots. J Proteome Res 2016; 15:2510-24. [PMID: 27321140 DOI: 10.1021/acs.jproteome.6b00026] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In the present study we have used label-free shotgun proteomic analysis to examine the effects of Fe deficiency on the protein profiles of highly pure sugar beet root plasma membrane (PM) preparations and detergent-resistant membranes (DRMs), the latter as an approach to study microdomains. Altogether, 545 proteins were detected, with 52 and 68 of them changing significantly with Fe deficiency in PM and DRM, respectively. Functional categorization of these proteins showed that signaling and general and vesicle-related transport accounted for approximately 50% of the differences in both PM and DRM, indicating that from a qualitative point of view changes induced by Fe deficiency are similar in both preparations. Results indicate that Fe deficiency has an impact in phosphorylation processes at the PM level and highlight the involvement of signaling proteins, especially those from the 14-3-3 family. Lipid profiling revealed Fe-deficiency-induced decreases in phosphatidic acid derivatives, which may impair vesicle formation, in agreement with the decreases measured in proteins related to intracellular trafficking and secretion. The modifications induced by Fe deficiency in the relative enrichment of proteins in DRMs revealed the existence of a group of cytoplasmic proteins that appears to be more attached to the PM in conditions of Fe deficiency.
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Affiliation(s)
| | | | - Sabine Lüthje
- University of Hamburg , Biocenter Klein Flottbek, Ohnhorststrasse 18, 22609 Hamburg, Germany
| | - José Antonio González-Reyes
- Departamento de Biología Celular, Fisiología e Inmunología, Universidad de Córdoba , Campus de Rabanales, Edificio Severo Ochoa, Córdoba 14014, Spain
| | - Sébastien Mongrand
- Laboratoire de Biogenèse Membranaire, UMR 5200 CNRS-Université Bordeaux Segalen, Bâtiment A3, INRA Bordeaux Aquitaine , 71 Rue Edouard Borlaux, CS 20032, F-33140 Villenave d'Ornon, France
| | | | | | | | | | - Ana Flor López-Millán
- USDA-ARS Chindren's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine , 1100 Bates Street, Houston, Texas 77030, United States
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35
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Ogbaga CC, Stepien P, Dyson BC, Rattray NJW, Ellis DI, Goodacre R, Johnson GN. Biochemical Analyses of Sorghum Varieties Reveal Differential Responses to Drought. PLoS One 2016; 11:e0154423. [PMID: 27153323 PMCID: PMC4859509 DOI: 10.1371/journal.pone.0154423] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Accepted: 04/13/2016] [Indexed: 12/17/2022] Open
Abstract
We have examined the biochemical responses of two sorghum cultivars of differing drought tolerance, Samsorg 17 (more drought tolerant) and Samsorg 40 (less drought tolerant), to sustained drought. Plants were exposed to different degrees of drought and then maintained at that level for five days. Responses were examined in terms of metabolic changes and the expression of drought induced proteins-Heat Shock Proteins (HSPs) and dehydrins (DHNs). Generalised phenotypic changes were studied using Fourier transform infrared (FT-IR) Spectroscopy and non-targeted Gas Chromatography Mass Spectrometry (GC-MS) was employed to detect changes in metabolites, while changes in protein expression were examined using Western blot analysis. Different response profiles of metabolites, HSPs and DHNs were observed in the two cultivars. Metabolic changes involved variation in amino acids, polysaccharides and their derivatives. A total of 188 compounds, with 142 known metabolites and 46 unknown small molecules, were detected in the two sorghum varieties. Under water deficit conditions, Samsorg 17 accumulated sugars and sugar alcohols, while in Samsorg 40 amino acids increased in concentration. This study suggest that the two Sorghum varieties adopt distinct approaches in response to drought, with Samsorg 17 being better able to maintain leaf function under severe drought conditions.
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Affiliation(s)
- Chukwuma C. Ogbaga
- The University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom
| | - Piotr Stepien
- The University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom
- Wroclaw University of Environmental and Life Sciences, Department of Plant Nutrition, ul. Grunwaldzka, Wroclaw, Poland
| | - Beth C. Dyson
- The University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom
- Manchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom
| | - Nicholas J. W. Rattray
- Manchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom
| | - David I. Ellis
- Manchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom
| | - Royston Goodacre
- Manchester Institute of Biotechnology, School of Chemistry, University of Manchester, United Kingdom
| | - Giles N. Johnson
- The University of Manchester, Faculty of Life Sciences, Oxford Road, Manchester, United Kingdom
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36
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Nath M, Tuteja N. NPKS uptake, sensing, and signaling and miRNAs in plant nutrient stress. PROTOPLASMA 2016; 253:767-786. [PMID: 26085375 DOI: 10.1007/s00709-015-0845-y] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2015] [Accepted: 06/08/2015] [Indexed: 05/24/2023]
Abstract
Sessile nature of higher plants consequently makes it highly adaptable for nutrient absorption and acquisition from soil. Plants require 17 essential elements for their growth and development which include 14 minerals (macronutrients: N, P, K, Mg, Ca, S; micronutrients: Cl, Fe, B, Mn, Zn, Cu, Ni, Mo) and 3 non-mineral (C, H, O) elements. The roots of higher plants must acquire these macronutrients and micronutrients from rhizosphere and further allocate to other plant parts for completing their life cycle. Plants evolved an intricate series of signaling and sensing cascades to maintain nutrient homeostasis and to cope with nutrient stress/availability. The specific receptors for nutrients in root, root system architecture, and internal signaling pathways help to develop plasticity in response to the nutrient starvation. Nitrogen (N), phosphorus (P), potassium (K), and sulfur (S) are essential for various metabolic processes, and their deficiency negatively effects the plant growth and yield. Genes coding for transporters and receptors for nutrients as well as some small non-coding RNAs have been implicated in nutrient uptake and signaling. This review summarizes the N, P, K, and S uptake, sensing and signaling events in nutrient stress condition especially in model plant Arabidopsis thaliana and involvement of microRNAs in nutrient deficiency. This article also provides a framework of uptake, sensing, signaling and to highlight the microRNA as an emerging major players in nutrient stress condition. Nutrient-plant-miRNA cross talk may help plant to cope up nutrient stress, and understanding their precise mechanism(s) will be necessary to develop high yielding smart crop with low nutrient input.
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Affiliation(s)
- Manoj Nath
- Plant Molecular Biology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110067, New Delhi, India
| | - Narendra Tuteja
- Plant Molecular Biology Group, International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110067, New Delhi, India.
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37
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Chen ZH, Wang Y, Wang JW, Babla M, Zhao C, García-Mata C, Sani E, Differ C, Mak M, Hills A, Amtmann A, Blatt MR. Nitrate reductase mutation alters potassium nutrition as well as nitric oxide-mediated control of guard cell ion channels in Arabidopsis. THE NEW PHYTOLOGIST 2016; 209:1456-69. [PMID: 26508536 DOI: 10.1111/nph.13714] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2015] [Accepted: 09/17/2015] [Indexed: 05/04/2023]
Abstract
Maintaining potassium (K(+) ) nutrition and a robust guard cell K(+) inward channel activity is considered critical for plants' adaptation to fluctuating and challenging growth environment. ABA induces stomatal closure through hydrogen peroxide and nitric oxide (NO) along with subsequent ion channel-mediated loss of K(+) and anions. However, the interactions of NO synthesis and signalling with K(+) nutrition and guard cell K(+) channel activities have not been fully explored in Arabidopsis. Physiological and molecular techniques were employed to dissect the interaction of nitrogen and potassium nutrition in regulating stomatal opening, CO2 assimilation and ion channel activity. These data, gene expression and ABA signalling transduction were compared in wild-type Columbia-0 (Col-0) and the nitrate reductase mutant nia1nia2. Growth and K(+) nutrition were impaired along with stomatal behaviour, membrane transport, and expression of genes associated with ABA signalling in the nia1nia2 mutant. ABA-inhibited K(+) in current and ABA-enhanced slow anion current were absent in nia1nia2. Exogenous NO restored regulation of these channels for complete stomatal closure in nia1nia2. While NO is an important signalling component in ABA-induced stomatal closure in Arabidopsis, our findings demonstrate a more complex interaction associating potassium nutrition and nitrogen metabolism in the nia1nia2 mutant that affects stomatal function.
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Affiliation(s)
- Zhong-Hua Chen
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China
- School of Science and Health, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Yizhou Wang
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK
| | - Jian-Wen Wang
- College of Pharmaceutical Sciences, Soochow University, Suzhou, 215123, China
| | - Mohammad Babla
- School of Science and Health, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Chenchen Zhao
- School of Science and Health, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Carlos García-Mata
- Instituto de Investigaciones Biológicas, CONCIET-Universidad Nacional de Mar del Plata, CC 1245, 7600, Mar del Plata, Argentina
| | - Emanuela Sani
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK
| | - Christopher Differ
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK
| | - Michelle Mak
- School of Science and Health, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Adrian Hills
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK
| | - Anna Amtmann
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK
| | - Michael R Blatt
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Bower Building, Glasgow, G12 8QQ, UK
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38
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Yang J, Hu W, Zhao W, Chen B, Wang Y, Zhou Z, Meng Y. Fruiting Branch K(+) Level Affects Cotton Fiber Elongation Through Osmoregulation. FRONTIERS IN PLANT SCIENCE 2016; 7:13. [PMID: 26834777 PMCID: PMC4722289 DOI: 10.3389/fpls.2016.00013] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2015] [Accepted: 01/07/2016] [Indexed: 05/08/2023]
Abstract
Potassium (K) deficiency in cotton plants results in reduced fiber length. As one of the primary osmotica, K(+) contributes to an increase in cell turgor pressure during fiber elongation. Therefore, it is hypothesized that fiber length is affected by K deficiency through an osmotic pathway, so in 2012 and 2013, an experiment was conducted to test this hypothesis by imposing three potassium supply regimes (0, 125, 250 kg K ha(-1)) on a low-K-sensitive cultivar, Siza 3, and a low-K-tolerant cultivar, Simian 3. We found that fibers were longer in the later season bolls than in the earlier ones in cotton plants grown under normal growth conditions, but later season bolls showed a greater sensitivity to low-K stress, especially the low-K sensitive genotype. We also found that the maximum velocity of fibre elongation (V max) is the parameter that best reflects the change in fiber elongation under K deficiency. This parameter mostly depends on cell turgor, so the content of the osmotically active solutes was analyzed accordingly. Statistical analysis showed that K(+) was the major osmotic factor affecting fiber length, and malate was likely facilitating K(+) accumulation into fibers, which enabled the low-K-tolerant genotype to cope with low-K stress. Moreover, the low-K-tolerant genotype tended to have greater K(+) absorptive capacities in the upper fruiting branches. Based on our findings, we suggest a fertilization scheme for Gossypium hirsutum that adds extra potash fertilizer or distributes it during the development of late season bolls to mitigate K deficiency in the second half of the growth season and to enhance fiber length in late season bolls.
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Affiliation(s)
| | | | | | | | | | - Zhiguo Zhou
- Key Laboratory of Crop Physiology and Ecology, Department of Agronomy, College of Agriculture, Nanjing Agricultural UniversityNanjing, China
| | - Yali Meng
- Key Laboratory of Crop Physiology and Ecology, Department of Agronomy, College of Agriculture, Nanjing Agricultural UniversityNanjing, China
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39
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Nieves-Cordones M, Martínez V, Benito B, Rubio F. Comparison between Arabidopsis and Rice for Main Pathways of K(+) and Na(+) Uptake by Roots. FRONTIERS IN PLANT SCIENCE 2016; 7:992. [PMID: 27458473 PMCID: PMC4932104 DOI: 10.3389/fpls.2016.00992] [Citation(s) in RCA: 61] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Accepted: 06/22/2016] [Indexed: 05/22/2023]
Abstract
K(+) is an essential macronutrient for plants. It is acquired by specific uptake systems located in roots. Although the concentrations of K(+) in the soil solution are widely variable, K(+) nutrition is secured by uptake systems that exhibit different affinities for K(+). Two main systems have been described for root K(+) uptake in several species: the high-affinity HAK5-like transporter and the inward-rectifier AKT1-like channel. Other unidentified systems may be also involved in root K(+) uptake, although they only seem to operate when K(+) is not limiting. The use of knock-out lines has allowed demonstrating their role in root K(+) uptake in Arabidopsis and rice. Plant adaptation to the different K(+) supplies relies on the finely tuned regulation of these systems. Low K(+)-induced transcriptional up-regulation of the genes encoding HAK5-like transporters occurs through a signal cascade that includes changes in the membrane potential of root cells and increases in ethylene and reactive oxygen species concentrations. Activation of AKT1 channels occurs through phosphorylation by the CIPK23/CBL1 complex. Recently, activation of the Arabidopsis HAK5 by the same complex has been reported, pointing to CIPK23/CBL as a central regulator of the plant's adaptation to low K(+). Na(+) is not an essential plant nutrient but it may be beneficial for some plants. At low concentrations, Na(+) improves growth, especially under K(+) deficiency. Thus, high-affinity Na(+) uptake systems have been described that belong to the HKT and HAK families of transporters. At high concentrations, typical of saline environments, Na(+) accumulates in plant tissues at high concentrations, producing alterations that include toxicity, water deficit and K(+) deficiency. Data concerning pathways for Na(+) uptake into roots under saline conditions are still scarce, although several possibilities have been proposed. The apoplast is a significant pathway for Na(+) uptake in rice grown under salinity conditions, but in other plant species different mechanisms involving non-selective cation channels or transporters are under discussion.
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Affiliation(s)
- Manuel Nieves-Cordones
- Biochimie et Physiologie Moléculaire des Plantes, Institut de Biologie Intégrative des Plantes, UMR 5004 CNRS/UMR 0386 INRA/Montpellier SupAgro/Université Montpellier 2Montpellier, France
| | - Vicente Martínez
- Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura – Consejo Superior de Investigaciones CientíficasMurcia, Spain
| | - Begoña Benito
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de MadridMadrid, Spain
| | - Francisco Rubio
- Departamento de Nutrición Vegetal, Centro de Edafología y Biología Aplicada del Segura – Consejo Superior de Investigaciones CientíficasMurcia, Spain
- *Correspondence: Francisco Rubio,
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The calcium sensor CBL7 modulates plant responses to low nitrate in Arabidopsis. Biochem Biophys Res Commun 2015; 468:59-65. [DOI: 10.1016/j.bbrc.2015.10.164] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2015] [Accepted: 10/30/2015] [Indexed: 12/31/2022]
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Sung J, Lee S, Lee Y, Ha S, Song B, Kim T, Waters BM, Krishnan HB. Metabolomic profiling from leaves and roots of tomato (Solanum lycopersicum L.) plants grown under nitrogen, phosphorus or potassium-deficient condition. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2015; 241:55-64. [PMID: 26706058 DOI: 10.1016/j.plantsci.2015.09.027] [Citation(s) in RCA: 69] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2015] [Revised: 09/29/2015] [Accepted: 09/30/2015] [Indexed: 05/21/2023]
Abstract
Specific metabolic network responses to mineral deficiencies are not well-defined. Here, we conducted a detailed broad-scale identification of metabolic responses of tomato leaves and roots to N, P or K deficiency. Tomato plants were grown hydroponically under optimal (5mM N, 0.5mM P, or 5mM K) and deficient (0.5mM N, 0.05mM P, or 0.5mM K) conditions and metabolites were measured by LC-MS and GC-MS. Based on these results, deficiency of any of these three minerals affected energy production and amino acid metabolism. N deficiency generally led to decreased amino acids and organic acids, and increased soluble sugars. P deficiency resulted in increased amino acids and organic acids in roots, and decreased soluble sugars. K deficiency caused accumulation of soluble sugars and amino acids in roots, and decreased organic acids and amino acids in leaves. Notable metabolic pathway alterations included; (1) increased levels of α-ketoglutarate and raffinose family oligosaccharides in N, P or K-deficient tomato roots, and (2) increased putrescine in K-deficient roots. These findings provide new knowledge of metabolic changes in response to mineral deficiencies.
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Affiliation(s)
- Jwakyung Sung
- Division of Soil and Fertilizer, National Academy of Agricultural Science, RDA, Wanju, North Jeolla Province 565-851, Republic of Korea
| | - Suyeon Lee
- Division of Soil and Fertilizer, National Academy of Agricultural Science, RDA, Wanju, North Jeolla Province 565-851, Republic of Korea
| | - Yejin Lee
- Division of Soil and Fertilizer, National Academy of Agricultural Science, RDA, Wanju, North Jeolla Province 565-851, Republic of Korea
| | - Sangkeun Ha
- Division of Soil and Fertilizer, National Academy of Agricultural Science, RDA, Wanju, North Jeolla Province 565-851, Republic of Korea
| | - Beomheon Song
- Department of Agronomy, Chungbuk National University, Cheongju, North Chungcheong Province 361-763, Republic of Korea
| | - Taewan Kim
- Department of Plant Life and Environmental Science, Hankyong National University, Anseong, Gyeonggi Province 456-749, Republic of Korea
| | - Brian M Waters
- Department of Agronomy and Horticulture, University of Nebraska, Lincoln, NE, USA
| | - Hari B Krishnan
- Plant Genetics Research Unit, Agriculture Research Service, USDA, 205 Curtis Hall, Columbia, MO 65211, USA; Plant Science Division, University of Missouri, 1-41, Agriculture Bldg., Columbia, MO 65211, USA.
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Shen Y, Shen L, Shen Z, Jing W, Ge H, Zhao J, Zhang W. The potassium transporter OsHAK21 functions in the maintenance of ion homeostasis and tolerance to salt stress in rice. PLANT, CELL & ENVIRONMENT 2015; 38:2766-79. [PMID: 26046379 DOI: 10.1111/pce.12586] [Citation(s) in RCA: 114] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2015] [Revised: 05/28/2015] [Accepted: 06/01/2015] [Indexed: 05/20/2023]
Abstract
The intracellular potassium (K(+) ) homeostasis, which is crucial for plant survival in saline environments, is modulated by K(+) channels and transporters. Some members of the high-affinity K(+) transporter (HAK) family are believed to function in the regulation of plant salt tolerance, but the physiological mechanisms remain unclear. Here, we report a significant inducement of OsHAK21 expression by high-salinity treatment and provide genetic evidence of the involvement of OsHAK21 in rice salt tolerance. Disruption of OsHAK21 rendered plants sensitive to salt stress. Compared with the wild type, oshak21 accumulated less K(+) and considerably more Na(+) in both shoots and roots, and had a significantly lower K(+) net uptake rate but higher Na(+) uptake rate. Our analyses of subcellular localizations and expression patterns showed that OsHAK21 was localized in the plasma membrane and expressed in xylem parenchyma and individual endodermal cells (putative passage cells). Further functional characterizations of OsHAK21 in K(+) uptake-deficient yeast and Arabidopsis revealed that OsHAK21 possesses K(+) transporter activity. These results demonstrate that OsHAK21 may mediate K(+) absorption by the plasma membrane and play crucial roles in the maintenance of the Na(+) /K(+) homeostasis in rice under salt stress.
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Affiliation(s)
- Yue Shen
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Like Shen
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Zhenxing Shen
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Wen Jing
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Hongliang Ge
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Jiangzhe Zhao
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Wenhua Zhang
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China
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Nguyen GN, Rothstein SJ, Spangenberg G, Kant S. Role of microRNAs involved in plant response to nitrogen and phosphorous limiting conditions. FRONTIERS IN PLANT SCIENCE 2015; 6:629. [PMID: 26322069 PMCID: PMC4534779 DOI: 10.3389/fpls.2015.00629] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2015] [Accepted: 07/30/2015] [Indexed: 05/22/2023]
Abstract
Plant microRNAs (miRNAs) are a class of small non-coding RNAs which target and regulate the expression of genes involved in several growth, development, and metabolism processes. Recent researches have shown involvement of miRNAs in the regulation of uptake and utilization of nitrogen (N) and phosphorus (P) and more importantly for plant adaptation to N and P limitation conditions by modifications in plant growth, phenology, and architecture and production of secondary metabolites. Developing strategies that allow for the higher efficiency of using both N and P fertilizers in crop production is important for economic and environmental benefits. Improved crop varieties with better adaptation to N and P limiting conditions could be a key approach to achieve this effectively. Furthermore, understanding on the interactions between N and P uptake and use and their regulation is important for the maintenance of nutrient homeostasis in plants. This review describes the possible functions of different miRNAs and their cross-talk relevant to the plant adaptive responses to N and P limiting conditions. In addition, a comprehensive understanding of these processes at molecular level and importance of biological adaptation for improved N and P use efficiency is discussed.
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Affiliation(s)
- Giao N. Nguyen
- Biosciences Research, Department of Economic DevelopmentHorsham, VIC, Australia
| | - Steven J. Rothstein
- Department of Molecular and Cellular Biology, College of Biological Science, University of GuelphGuelph, ON, Canada
| | - German Spangenberg
- Biosciences Research, Department of Economic Development, AgriBio, Centre for AgriBioscienceBundoora, VIC, Australia
- School of Applied Systems Biology, La Trobe UniversityBundoora, VIC, Australia
| | - Surya Kant
- Biosciences Research, Department of Economic DevelopmentHorsham, VIC, Australia
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44
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Grefen C, Karnik R, Larson E, Lefoulon C, Wang Y, Waghmare S, Zhang B, Hills A, Blatt MR. A vesicle-trafficking protein commandeers Kv channel voltage sensors for voltage-dependent secretion. NATURE PLANTS 2015; 1:15108. [PMID: 27250541 DOI: 10.1038/nplants.2015.108] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2015] [Accepted: 06/29/2015] [Indexed: 06/05/2023]
Abstract
Growth in plants depends on ion transport for osmotic solute uptake and secretory membrane trafficking to deliver material for wall remodelling and cell expansion. The coordination of these processes lies at the heart of the question, unresolved for more than a century, of how plants regulate cell volume and turgor. Here we report that the SNARE protein SYP121 (SYR1/PEN1), which mediates vesicle fusion at the Arabidopsis plasma membrane, binds the voltage sensor domains (VSDs) of K(+) channels to confer a voltage dependence on secretory traffic in parallel with K(+) uptake. VSD binding enhances secretion in vivo subject to voltage, and mutations affecting VSD conformation alter binding and secretion in parallel with channel gating, net K(+) concentration, osmotic content and growth. These results demonstrate a new and unexpected mechanism for secretory control, in which a subset of plant SNAREs commandeer K(+) channel VSDs to coordinate membrane trafficking with K(+) uptake for growth.
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Affiliation(s)
- Christopher Grefen
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Rucha Karnik
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Emily Larson
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Cécile Lefoulon
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Yizhou Wang
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Sakharam Waghmare
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Ben Zhang
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Adrian Hills
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
| | - Michael R Blatt
- Laboratory of Plant Physiology and Biophysics, Bower Building, University of Glasgow, Glasgow G12 8QQ, UK
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Haydon MJ, Román Á, Arshad W. Nutrient homeostasis within the plant circadian network. FRONTIERS IN PLANT SCIENCE 2015; 6:299. [PMID: 25972889 PMCID: PMC4413779 DOI: 10.3389/fpls.2015.00299] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2015] [Accepted: 04/14/2015] [Indexed: 05/18/2023]
Abstract
Circadian clocks have evolved to enhance adaptive physiology in the predictable, fluctuating environment caused by the rotation of the planet. Nutrient acquisition is central to plant growth performance and the nutrient demands of a plant change according to the time of day. Therefore, major aspects of nutrient homeostasis, including carbon assimilation and mineral uptake, are under circadian control. It is also emerging that there is feedback of nutritional status to the circadian clock to integrate these processes. This review will highlight recent insights into the role of the circadian clock in regulating plant nutrition as well as discuss the role for nutrients in affecting circadian function.
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Affiliation(s)
- Michael J. Haydon
- *Correspondence: Michael J. Haydon, Department of Biology, University of York, Wentworth Way, York YO10 5DD, UK,
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Rubio F, Fon M, Ródenas R, Nieves-Cordones M, Alemán F, Rivero RM, Martínez V. A low K+ signal is required for functional high-affinity K+ uptake through HAK5 transporters. PHYSIOLOGIA PLANTARUM 2014; 152:558-70. [PMID: 24716623 DOI: 10.1111/ppl.12205] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2013] [Revised: 02/17/2014] [Accepted: 03/06/2014] [Indexed: 05/27/2023]
Abstract
The high-affinity K(+) transporter HAK5 is a key system for root K(+) uptake and, under very low external K(+), the only one capable of supplying K(+) to the plant. Functional HAK5-mediated K(+) uptake should be tightly regulated for plant adaptation to different environmental conditions. Thus, it has been described that the gene encoding the transporter is transcriptionally regulated, being highly induced under K(+) limitation. Here we show that environmental conditions, such as the lack of K(+), NO(3)(-) or P, that induced a hyperpolarization of the plasma membrane of root cells, induce HAK5 transcription. However, only the deprivation of K(+) produces functional HAK5-mediated K(+) uptake in the root. These results suggest on the one hand the existence of a posttranscriptional regulation of HAK5 elicited by the low K(+) signal and on the other that HAK5 may be involved in yet-unknown functions related to NO(3)(-) and P deficiencies. These results have been obtained here with Solanum lycopersicum (cv. Micro-Tom) as well as Arabidopsis thaliana plants, suggesting that the posttranscriptional regulation of high-affinity HAK transporters take place in all plant species.
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Affiliation(s)
- Francisco Rubio
- Departamento de Nutrición Vegetal, CEBAS-CSIC, Campus de Espinardo, Murcia, 30100, Spain
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Lefoulon C, Karnik R, Honsbein A, Gutla PV, Grefen C, Riedelsberger J, Poblete T, Dreyer I, Gonzalez W, Blatt MR. Voltage-sensor transitions of the inward-rectifying K+ channel KAT1 indicate a latching mechanism biased by hydration within the voltage sensor. PLANT PHYSIOLOGY 2014; 166:960-75. [PMID: 25185120 PMCID: PMC4213121 DOI: 10.1104/pp.114.244319] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
The Kv-like (potassium voltage-dependent) K(+) channels at the plasma membrane, including the inward-rectifying KAT1 K(+) channel of Arabidopsis (Arabidopsis thaliana), are important targets for manipulating K(+) homeostasis in plants. Gating modification, especially, has been identified as a promising means by which to engineer plants with improved characteristics in mineral and water use. Understanding plant K(+) channel gating poses several challenges, despite many similarities to that of mammalian Kv and Shaker channel models. We have used site-directed mutagenesis to explore residues that are thought to form two electrostatic countercharge centers on either side of a conserved phenylalanine (Phe) residue within the S2 and S3 α-helices of the voltage sensor domain (VSD) of Kv channels. Consistent with molecular dynamic simulations of KAT1, we show that the voltage dependence of the channel gate is highly sensitive to manipulations affecting these residues. Mutations of the central Phe residue favored the closed KAT1 channel, whereas mutations affecting the countercharge centers favored the open channel. Modeling of the macroscopic current kinetics also highlighted a substantial difference between the two sets of mutations. We interpret these findings in the context of the effects on hydration of amino acid residues within the VSD and with an inherent bias of the VSD, when hydrated around a central Phe residue, to the closed state of the channel.
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Affiliation(s)
- Cécile Lefoulon
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Rucha Karnik
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Annegret Honsbein
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Paul Vijay Gutla
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Christopher Grefen
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Janin Riedelsberger
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Tomás Poblete
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Ingo Dreyer
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Wendy Gonzalez
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
| | - Michael R Blatt
- Laboratory of Plant Physiology and Biophysics, University of Glasgow, Glasgow G12 8QQ, United Kingdom (C.L., R.K., A.H., P.V.G., C.G., M.R.B.);Centro de Bioinformatica y Simulacion Molecular, Universidad de Talca, Casilla 721, Talca, Chile (J.R., T.P., W.G.);University of Potsdam, Biochemistry and Biology Group BPMBP, D14476 Golm, Germany (J.R., I.D., W.G.); andCentre for Biotechnology and Plant Genomics UPM, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria, 28223 Pozuelo de Alacon, Madrid, Spain (I.D.)
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Mirza N, Taj G, Arora S, Kumar A. Transcriptional expression analysis of genes involved in regulation of calcium translocation and storage in finger millet (Eleusine coracana L. Gartn.). Gene 2014; 550:171-9. [PMID: 25101868 DOI: 10.1016/j.gene.2014.08.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2014] [Revised: 07/31/2014] [Accepted: 08/02/2014] [Indexed: 12/20/2022]
Abstract
Finger millet (Eleusine coracana) variably accumulates calcium in different tissues, due to differential expression of genes involved in uptake, translocation and accumulation of calcium. Ca(2+)/H(+) antiporter (CAX1), two pore channel (TPC1), CaM-stimulated type IIB Ca(2+) ATPase and two CaM dependent protein kinase (CaMK1 and 2) homologs were studied in finger millet. Two genotypes GP-45 and GP-1 (high and low calcium accumulating, respectively) were used to understand the role of these genes in differential calcium accumulation. For most of the genes higher expression was found in the high calcium accumulating genotype. CAX1 was strongly expressed in the late stages of spike development and could be responsible for accumulating high concentrations of calcium in seeds. TPC1 and Ca(2+) ATPase homologs recorded strong expression in the root, stem and developing spike and signify their role in calcium uptake and translocation, respectively. Calmodulin showed strong expression and a similar expression pattern to the type IIB ATPase in the developing spike only and indicating developing spike or even seed specific isoform of CaM affecting the activity of downstream target of calcium transportation. Interestingly, CaMK1 and CaMK2 had expression patterns similar to ATPase and TPC1 in various tissues raising a possibility of their respective regulation via CaM kinase. Expression pattern of 14-3-3 gene was observed to be similar to CAX1 gene in leaf and developing spike inferring a surprising possibility of CAX1 regulation through 14-3-3 protein. Our results provide a molecular insight for explaining the mechanism of calcium accumulation in finger millet.
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Affiliation(s)
- Neelofar Mirza
- Department of Molecular Biology & Genetic Engineering, College of Basic Sciences & Humanities, G B Pant University of Agriculture & Technology, Pantnagar 263145, Uttarakhand, India
| | - Gohar Taj
- Department of Molecular Biology & Genetic Engineering, College of Basic Sciences & Humanities, G B Pant University of Agriculture & Technology, Pantnagar 263145, Uttarakhand, India
| | - Sandeep Arora
- Department of Molecular Biology & Genetic Engineering, College of Basic Sciences & Humanities, G B Pant University of Agriculture & Technology, Pantnagar 263145, Uttarakhand, India
| | - Anil Kumar
- Department of Molecular Biology & Genetic Engineering, College of Basic Sciences & Humanities, G B Pant University of Agriculture & Technology, Pantnagar 263145, Uttarakhand, India.
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49
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Abstract
Potassium is a macronutrient that is crucial for healthy plant growth. Potassium availability, however, is often limited in agricultural fields and thus crop yields and quality are reduced. Therefore, improving the efficiency of potassium uptake and transport, as well as its utilization, in plants is important for agricultural sustainability. This review summarizes the current knowledge on the molecular mechanisms involved in potassium uptake and transport in plants, and the molecular response of plants to different levels of potassium availability. Based on this information, four strategies for improving potassium use efficiency in plants are proposed; 1) increased root volume, 2) increasing efficiency of potassium uptake from the soil and translocation in planta, 3) increasing mobility of potassium in soil, and 4) molecular breeding new varieties with greater potassium efficiency through marker assisted selection which will require identification and utilization of potassium associated quantitative trait loci.
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Affiliation(s)
- Ryoung Shin
- RIKEN Center for Sustainable Resource Science, Yokohama 230-0045,
Japan
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Tegeder M. Transporters involved in source to sink partitioning of amino acids and ureides: opportunities for crop improvement. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:1865-78. [PMID: 24489071 DOI: 10.1093/jxb/eru012] [Citation(s) in RCA: 138] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
In most plant species, amino acids are the predominant chemical forms in which nitrogen is transported. However, in nodulated tropical or subtropical legumes, ureides are the main nitrogen transport compounds. This review describes the partitioning of amino acids and ureides within the plant, and follows their movement from the location of synthesis (source) to the sites of usage (sink). Xylem and phloem connect source and sink organs and serve as routes for long-distance transport of the organic nitrogen. Loading and unloading of these transport pathways might require movement of amino acids and ureides across cell membranes, a task that is mediated by membrane proteins (i.e. transporters) functioning as export or import systems. The current knowledge on amino acid and ureide transporters involved in long-distance transport of nitrogen is provided and their importance for source and sink physiology discussed. The review concludes by exploring possibilities for genetic manipulation of organic nitrogen transporter activities to confer increases in crop productivity.
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Affiliation(s)
- Mechthild Tegeder
- School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA
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