1
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Busch FA, Ainsworth EA, Amtmann A, Cavanagh AP, Driever SM, Ferguson JN, Kromdijk J, Lawson T, Leakey ADB, Matthews JSA, Meacham-Hensold K, Vath RL, Vialet-Chabrand S, Walker BJ, Papanatsiou M. A guide to photosynthetic gas exchange measurements: Fundamental principles, best practice and potential pitfalls. PLANT, CELL & ENVIRONMENT 2024; 47:3344-3364. [PMID: 38321805 DOI: 10.1111/pce.14815] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2022] [Accepted: 12/31/2023] [Indexed: 02/08/2024]
Abstract
Gas exchange measurements enable mechanistic insights into the processes that underpin carbon and water fluxes in plant leaves which in turn inform understanding of related processes at a range of scales from individual cells to entire ecosytems. Given the importance of photosynthesis for the global climate discussion it is important to (a) foster a basic understanding of the fundamental principles underpinning the experimental methods used by the broad community, and (b) ensure best practice and correct data interpretation within the research community. In this review, we outline the biochemical and biophysical parameters of photosynthesis that can be investigated with gas exchange measurements and we provide step-by-step guidance on how to reliably measure them. We advise on best practices for using gas exchange equipment and highlight potential pitfalls in experimental design and data interpretation. The Supporting Information contains exemplary data sets, experimental protocols and data-modelling routines. This review is a community effort to equip both the experimental researcher and the data modeller with a solid understanding of the theoretical basis of gas-exchange measurements, the rationale behind different experimental protocols and the approaches to data interpretation.
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Affiliation(s)
- Florian A Busch
- School of Biosciences and Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK
- Research School of Biology, The Australian National University, Canberra, Australian Captial Territory, Australia
| | | | - Anna Amtmann
- School of Molecular Biosciences, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
| | - Amanda P Cavanagh
- School of Life Sciences, University of Essex, Colchester, UK
- Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, Illinois, USA
| | - Steven M Driever
- Centre for Crop Systems Analysis, Wageningen University & Research, Wageningen, The Netherlands
| | - John N Ferguson
- School of Life Sciences, University of Essex, Colchester, UK
| | - Johannes Kromdijk
- Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, Illinois, USA
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Tracy Lawson
- School of Life Sciences, University of Essex, Colchester, UK
| | - Andrew D B Leakey
- Departments of Plant Biology and Crop Sciences, University of Illinois Urbana Champaign, Urbana, Illinois, USA
| | | | | | - Richard L Vath
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
- LI-COR Environmental, Lincoln, Nebraska, USA
| | - Silvere Vialet-Chabrand
- Department of Plant Sciences, Horticulture and Product Physiology, Wageningen, The Netherlands
| | - Berkley J Walker
- Plant Research Laboratory, Michigan State University, East Lansing, Michigan, USA
- Department of Plant Biology, Michigan State University, East Lansing, Michigan, USA
| | - Maria Papanatsiou
- School of Molecular Biosciences, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
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2
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Ye ZP, An T, Govindjee G, Robakowski P, Stirbet A, Yang XL, Hao XY, Kang HJ, Wang FB. Addressing the long-standing limitations of double exponential and non-rectangular hyperbolic models in quantifying light-response of electron transport rates in different photosynthetic organisms under various conditions. FRONTIERS IN PLANT SCIENCE 2024; 15:1332875. [PMID: 38476692 PMCID: PMC10929714 DOI: 10.3389/fpls.2024.1332875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Accepted: 02/02/2024] [Indexed: 03/14/2024]
Abstract
The models used to describe the light response of electron transport rate in photosynthesis play a crucial role in determining two key parameters i.e., the maximum electron transport rate (J max) and the saturation light intensity (I sat). However, not all models accurately fit J-I curves, and determine the values of J max and I sat. Here, three models, namely the double exponential (DE) model, the non-rectangular hyperbolic (NRH) model, and a mechanistic model developed by one of the coauthors (Z-P Ye) and his coworkers (referred to as the mechanistic model), were compared in terms of their ability to fit J-I curves and estimate J max and I sat. Here, we apply these three models to a series of previously collected Chl a fluorescence data from seven photosynthetic organisms, grown under different conditions. Our results show that the mechanistic model performed well in describing the J-I curves, regardless of whether photoinhibition/dynamic down-regulation of photosystem II (PSII) occurs. Moreover, both J max and I sat estimated by this model are in very good agreement with the measured data. On the contrary, although the DE model simulates quite well the J-I curve for the species studied, it significantly overestimates both the J max of Amaranthus hypochondriacus and the I sat of Microcystis aeruginosa grown under NH4 +-N supply. More importantly, the light intensity required to achieve the potential maximum of J (J s) estimated by this model exceeds the unexpected high value of 105 μmol photons m-2 s-1 for Triticum aestivum and A. hypochondriacus. The NRH model fails to characterize the J-I curves with dynamic down-regulation/photoinhibition for Abies alba, Oryza sativa and M. aeruginosa. In addition, this model also significantly overestimates the values of J max for T. aestivum at 21% O2 and A. hypochondriacus grown under normal condition, and significantly underestimates the values of J max for M. aeruginosa grown under NO3 -N supply. Our study provides evidence that the 'mechanistic model' is much more suitable than both the DE and NRH models in fitting the J-I curves and in estimating the photosynthetic parameters. This is a powerful tool for studying light harvesting properties and the dynamic down-regulation of PSII/photoinhibition.
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Affiliation(s)
- Zi-Piao Ye
- The Institute of Biophysics in College of Mathematics and Physics, Jinggangshan University, Ji’an, Jiangxi, China
| | - Ting An
- School of Biological Sciences and Engineering, Jiangxi Agriculture University, Nanchang, China
| | - Govindjee Govindjee
- Plant Biology, Biochemistry, and Biophysics, University of Illinois at Urbana-Champaign, Urbana, IL, United States
| | - Piotr Robakowski
- Faculty of Forestry and Wood Technology, Poznan University of Life Sciences, Poznan, Poland
| | | | - Xiao-Long Yang
- School of Life Sciences, University of Nantong, Nantong, Jiangsu, China
| | - Xing-Yu Hao
- College of Agriculture/State Key Laboratory of Sustainable Dry land Agriculture Jointly Built by the Shanxi Province and the Ministry of Science and Technology, Shanxi Agricultural University, Taiyuan, Shanxi, China
| | - Hua-Jing Kang
- Southern Zhejiang Key Laboratory of Crop Breeding of Zhejiang Province, Wenzhou Academy of Agricultural Sciences, Wenzhou, Zhejiang, China
| | - Fu-Biao Wang
- The Institute of Biophysics in College of Mathematics and Physics, Jinggangshan University, Ji’an, Jiangxi, China
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3
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Busch FA. Photosynthetic Gas Exchange in Land Plants at the Leaf Level. Methods Mol Biol 2024; 2790:41-61. [PMID: 38649565 DOI: 10.1007/978-1-0716-3790-6_3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2024]
Abstract
Leaf-level gas exchange enables insights into the physiology and in vivo biochemical processes of plants. Advances in infrared gas analysis have resulted in user-friendly off-the-shelf gas exchange systems that allow researchers to collect physiological measurements with the push of a few buttons. Here, I describe how to set up the gas exchange equipment, what to pay attention to while making measurements, and provide some guidelines on how to analyze and interpret the data obtained.
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Affiliation(s)
- Florian A Busch
- School of Biosciences and The Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK.
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4
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Ye ZP, Stirbet A, An T, Robakowski P, Kang HJ, Yang XL, Wang FB. Investigation on absorption cross-section of photosynthetic pigment molecules based on a mechanistic model of the photosynthetic electron flow-light response in C 3, C 4 species and cyanobacteria grown under various conditions. FRONTIERS IN PLANT SCIENCE 2023; 14:1234462. [PMID: 37711288 PMCID: PMC10497745 DOI: 10.3389/fpls.2023.1234462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/04/2023] [Accepted: 08/07/2023] [Indexed: 09/16/2023]
Abstract
Investigation on intrinsic properties of photosynthetic pigment molecules participating in solar energy absorption and excitation, especially their eigen-absorption cross-section (σ ik) and effective absorption cross-section (σ ' ik), is important to understand photosynthesis. Here, we present the development and application of a new method to determine these parameters, based on a mechanistic model of the photosynthetic electron flow-light response. The analysis with our method of a series of previously collected chlorophyll a fluorescence data shows that the absorption cross-section of photosynthetic pigment molecules has different values of approximately 10-21 m2, for several photosynthetic organisms grown under various conditions: (1) the conifer Abies alba Mill., grown under high light or low light; (2) Taxus baccata L., grown under fertilization or non-fertilization conditions; (3) Glycine max L. (Merr.), grown under a CO2 concentration of 400 or 600 μmol CO2 mol-1 in a leaf chamber under shaded conditions; (4) Zea mays L., at temperatures of 30°C or 35°C in a leaf chamber; (5) Osmanthus fragrans Loureiro, with shaded-leaf or sun-leaf; and (6) the cyanobacterium Microcystis aeruginosa FACHB905, grown under two different nitrogen supplies. Our results show that σ ik has the same order of magnitude (approximately 10-21 m2), and σ ' ik for these species decreases with increasing light intensity, demonstrating the operation of a key regulatory mechanism to reduce solar absorption and avoid high light damage. Moreover, compared with other approaches, both σ ik and σ ' ik can be more easily estimated by our method, even under various growth conditions (e.g., different light environment; different CO2, NO2, O2, and O3 concentrations; air temperatures; or water stress), regardless of the type of the sample (e.g., dilute or concentrated cell suspensions or leaves). Our results also show that CO2 concentration and temperature have little effect on σ ik values for G. max and Z. mays. Consequently, our approach provides a powerful tool to investigate light energy absorption of photosynthetic pigment molecules and gives us new information on how plants and cyanobacteria modify their light-harvesting properties under different stress conditions.
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Affiliation(s)
- Zi-Piao Ye
- The Institute of Biophysics in College of Mathematics and Physics, Jinggangshan University, Ji’an, Jiangxi, China
| | | | - Ting An
- School of Biological Sciences and Engineering, Jiangxi Agriculture University, Nanchang, China
| | - Piotr Robakowski
- Faculty of Forestry and Wood Technology, Poznan University of Life Sciences, Poznan, Poland
| | - Hua-Jing Kang
- Southern Zhejiang Key Laboratory of Crop Breeding, Wenzhou Academy of Agricultural Sciences, Wenzhou, Zhejiang, China
| | - Xiao-Long Yang
- School of Life Sciences, Nantong University, Nantong, Jiangsu, China
| | - Fu-Biao Wang
- The Institute of Biophysics in College of Mathematics and Physics, Jinggangshan University, Ji’an, Jiangxi, China
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5
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Joubert D, Zhang N, Berman S, Kaiser E, Molenaar J, Stigter J. A small dynamic leaf-level model predicting photosynthesis in greenhouse tomatoes. PLoS One 2023; 18:e0275047. [PMID: 36927993 PMCID: PMC10019686 DOI: 10.1371/journal.pone.0275047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Accepted: 03/01/2023] [Indexed: 03/17/2023] Open
Abstract
The conversion of supplemental greenhouse light energy into biomass is not always optimal. Recent trends in global energy prices and discussions on climate change highlight the need to reduce our energy footprint associated with the use of supplemental light in greenhouse crop production. This can be achieved by implementing "smart" lighting regimens which in turn rely on a good understanding of how fluctuating light influences photosynthetic physiology. Here, a simple fit-for-purpose dynamic model is presented. It accurately predicts net leaf photosynthesis under natural fluctuating light. It comprises two ordinary differential equations predicting: 1) the total stomatal conductance to CO2 diffusion and 2) the CO2 concentration inside a leaf. It contains elements of the Farquhar-von Caemmerer-Berry model and the successful incorporation of this model suggests that for tomato (Solanum lycopersicum L.), it is sufficient to assume that Rubisco remains activated despite rapid fluctuations in irradiance. Furthermore, predictions of the net photosynthetic rate under both 400ppm and enriched 800ppm ambient CO2 concentrations indicate a strong correlation between the dynamic rate of photosynthesis and the rate of electron transport. Finally, we are able to indicate whether dynamic photosynthesis is Rubisco or electron transport rate limited.
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Affiliation(s)
- Dominique Joubert
- Mathematical and Statistical Methods Group, Wageningen University and Research, Wageningen, Gelderland, The Netherlands
- * E-mail:
| | - Ningyi Zhang
- Horticulture and Product Physiology, Wageningen University and Research, Wageningen, Gelderland, The Netherlands
| | - Sarah.R. Berman
- Horticulture and Product Physiology, Wageningen University and Research, Wageningen, Gelderland, The Netherlands
| | - Elias Kaiser
- Horticulture and Product Physiology, Wageningen University and Research, Wageningen, Gelderland, The Netherlands
| | - Jaap Molenaar
- Mathematical and Statistical Methods Group, Wageningen University and Research, Wageningen, Gelderland, The Netherlands
| | - J.D. Stigter
- Mathematical and Statistical Methods Group, Wageningen University and Research, Wageningen, Gelderland, The Netherlands
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6
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Wang H, Harrison SP, Li M, Prentice IC, Qiao S, Wang R, Xu H, Mengoli G, Peng Y, Yang Y. The China plant trait database version 2. Sci Data 2022; 9:769. [PMID: 36522346 PMCID: PMC9755148 DOI: 10.1038/s41597-022-01884-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Accepted: 12/06/2022] [Indexed: 12/23/2022] Open
Abstract
Plant functional traits represent adaptive strategies to the environment, linked to biophysical and biogeochemical processes and ecosystem functioning. Compilations of trait data facilitate research in multiple fields from plant ecology through to land-surface modelling. Here we present version 2 of the China Plant Trait Database, which contains information on morphometric, physical, chemical, photosynthetic and hydraulic traits from 1529 unique species in 140 sites spanning a diversity of vegetation types. Version 2 has five improvements compared to the previous version: (1) new data from a 4-km elevation transect on the edge of Tibetan Plateau, including alpine vegetation types not sampled previously; (2) inclusion of traits related to hydraulic processes, including specific sapwood conductance, the area ratio of sapwood to leaf, wood density and turgor loss point; (3) inclusion of information on soil properties to complement the existing data on climate and vegetation (4) assessments and flagging the reliability of individual trait measurements; and (5) inclusion of standardized templates for systematical field sampling and measurements.
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Grants
- 694481 GC2.0 EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council)
- 787203 REALM EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council)
- the LEMONTREE (Land Ecosystem Models based On New Theory, obseRvations and ExperimEnts) project, funded through the generosity of Eric and Wendy Schmidt by recommendation of the Schmidt Futures program
- High-End Foreign Expert award at Tsinghua University (G20190001075, G20200001064, G2021102001); the LEMONTREE (Land Ecosystem Models based On New Theory, obseRvations and ExperimEnts) project, funded through the generosity of Eric and Wendy Schmidt by recommendation of the Schmidt Futures program
- the LEMONTREE (Land Ecosystem Models based On New Theory, obseRvations and ExperimEnts) project, funded through the generosity of Eric and Wendy Schmidt by recommendation of the Schmidt Futures program; the High-End Foreign Expert award at Tsinghua University (G20190001075, G20200001064, G2021102001); the Imperial College initiative on Grand Challenges in Ecology and Environment
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Affiliation(s)
- Han Wang
- Department of Earth System Science, Ministry of Education Key Laboratory for Earth System Modeling, Institute for Global Change Studies, Tsinghua University, Beijing, 100084, China.
| | - Sandy P Harrison
- Department of Earth System Science, Ministry of Education Key Laboratory for Earth System Modeling, Institute for Global Change Studies, Tsinghua University, Beijing, 100084, China
- School of Archaeology, Geography and Environmental Sciences (SAGES), University of Reading, Reading, RG6 6AH, United Kingdom
| | - Meng Li
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, Nanjing, 210037, China
| | - I Colin Prentice
- Department of Earth System Science, Ministry of Education Key Laboratory for Earth System Modeling, Institute for Global Change Studies, Tsinghua University, Beijing, 100084, China
- Georgina Mace Centre for the Living Planet, Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, United Kingdom
| | - Shengchao Qiao
- Department of Earth System Science, Ministry of Education Key Laboratory for Earth System Modeling, Institute for Global Change Studies, Tsinghua University, Beijing, 100084, China
| | - Runxi Wang
- School of Biological Sciences, University of Hong Kong, Pok Fu Lam Road, Hong Kong SAR, China
| | - Huiying Xu
- Department of Earth System Science, Ministry of Education Key Laboratory for Earth System Modeling, Institute for Global Change Studies, Tsinghua University, Beijing, 100084, China
| | - Giulia Mengoli
- Georgina Mace Centre for the Living Planet, Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, United Kingdom
| | - Yunke Peng
- Department of Environmental Systems Science, ETH, Universitätsstrasse 2, 8092, Zurich, Switzerland
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, 8903, Birmensdorf, Switzerland
| | - Yanzheng Yang
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China
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7
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Jiménez-Leyva A, Orozco-Avitia J, Gutiérrez A, Vargas G, Sánchez E, Muñoz E, Esqueda M. Functional plasticity of Capsicum annuum var. glabriusculum through multiple traits. AOB PLANTS 2022; 14:plac017. [PMID: 35774379 PMCID: PMC9237842 DOI: 10.1093/aobpla/plac017] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 05/04/2022] [Indexed: 06/15/2023]
Abstract
The diversity of functional traits still has not been studied enough in model plant species, even less so in little-known species. This experiment was carried out under the extreme heat of Sonoran Desert, using shading nets and under conditions where the availability of water and nutrients was not a stress factor. We evaluated how the low, intermediate and high sunlight regimes impact survival and promote multiple alterations on phenological and ecophysiological response of cultivated Capsicum annuum var. glabriusculum plants. Extremely warm temperatures promoted a high heat sum in degrees days throughout plants development. Most plants grown in high sunlight regimes did not survive; under intermediate sunlight regimes survival was high and plants developed vegetative and reproductively; but under low sunlight regimes plants survival was high; however, they developed just vegetatively. Photosynthetic response to light suggests that plants are physiologically acclimated to low and intermediate irradiance, whereas the CO2 assimilation curves suggest contrasting photosynthetic capacity traits. Under the intermediate sunlight regimes, plants strengthened their performance through multiple functional traits (e.g. CO2 and water diffusion traits, photosynthetic capacity, respiration, among others). Consequently, their biomass gain was faster and proportionally higher by 76 % with an investment of 14 % in fruits development. The principal components analysis extracted the main explanatory functional traits: photosynthetic nitrogen allocation, stomatal limitation, mesophyll conductance, Rubisco maximum carboxylation velocity, among others. In conclusion, phenological response and multiple functional traits determine plants acclimation to sunlight regimes and extremely warm temperatures in short term.
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Affiliation(s)
- Alberto Jiménez-Leyva
- Centro de Investigación en Alimentación y Desarrollo, Carretera Gustavo Enrique Astiazarán Rosas No. 46, Col. La Victoria, Hermosillo, Sonora C.P. 83304, México
| | - Jesús Orozco-Avitia
- Centro de Investigación en Alimentación y Desarrollo, Carretera Gustavo Enrique Astiazarán Rosas No. 46, Col. La Victoria, Hermosillo, Sonora C.P. 83304, México
| | - Aldo Gutiérrez
- Centro de Investigación en Alimentación y Desarrollo, Carretera Gustavo Enrique Astiazarán Rosas No. 46, Col. La Victoria, Hermosillo, Sonora C.P. 83304, México
| | - Georgina Vargas
- Centro de Investigación en Alimentación y Desarrollo, Carretera Gustavo Enrique Astiazarán Rosas No. 46, Col. La Victoria, Hermosillo, Sonora C.P. 83304, México
| | - Esteban Sánchez
- Centro de Investigación en Alimentación y Desarrollo, Av. 4ta Sur 3820, Fracc. Vencedores del Desierto, Delicias, Chihuahua C.P. 33089, México
| | - Ezequiel Muñoz
- Centro de Investigación en Alimentación y Desarrollo, Av. 4ta Sur 3820, Fracc. Vencedores del Desierto, Delicias, Chihuahua C.P. 33089, México
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8
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McAusland L, Vialet-Chabrand S, Jauregui I, Burridge A, Hubbart-Edwards S, Fryer MJ, King IP, King J, Pyke K, Edwards KJ, Carmo-Silva E, Lawson T, Murchie EH. Variation in key leaf photosynthetic traits across wheat wild relatives is accession dependent not species dependent. THE NEW PHYTOLOGIST 2020; 228:1767-1780. [PMID: 32910841 DOI: 10.1111/nph.16832] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Accepted: 07/03/2020] [Indexed: 05/26/2023]
Abstract
The wild relatives of modern wheat represent an underutilized source of genetic and phenotypic diversity and are of interest in breeding owing to their wide adaptation to diverse environments. Leaf photosynthetic traits underpin the rate of production of biomass and yield and have not been systematically explored in the wheat relatives. This paper identifies and quantifies the phenotypic variation in photosynthetic, stomatal, and morphological traits in up to 88 wheat wild relative accessions across five genera. Both steady-state measurements and dynamic responses to step changes in light intensity are assessed. A 2.3-fold variation for flag leaf light and CO2 -saturated rates of photosynthesis Amax was observed. Many accessions showing higher and more variable Amax , maximum rates of carboxylation, electron transport, and Rubisco activity when compared with modern genotypes. Variation in dynamic traits was also significant; with distinct genus-specific trends in rates of induction of nonphotochemical quenching and rate of stomatal opening. We conclude that utilization of wild relatives for improvement of photosynthesis is supported by the existence of a high degree of natural variation in key traits and should consider not only genus-level properties but variation between individual accessions.
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Affiliation(s)
- Lorna McAusland
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Nottingham, LE12 5RD, UK
| | | | - Iván Jauregui
- Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, UK
| | | | - Stella Hubbart-Edwards
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Nottingham, LE12 5RD, UK
| | - Michael J Fryer
- School of Life Science, University of Essex, Wivenhoe Park, Colchester, CO4 3SQ, UK
| | - Ian P King
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Nottingham, LE12 5RD, UK
| | - Julie King
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Nottingham, LE12 5RD, UK
| | - Kevin Pyke
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Nottingham, LE12 5RD, UK
| | | | | | - Tracy Lawson
- School of Life Science, University of Essex, Wivenhoe Park, Colchester, CO4 3SQ, UK
| | - Erik H Murchie
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Sutton Bonington, Nottingham, LE12 5RD, UK
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9
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Emerging research in plant photosynthesis. Emerg Top Life Sci 2020; 4:137-150. [PMID: 32573736 DOI: 10.1042/etls20200035] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Revised: 06/03/2020] [Accepted: 06/05/2020] [Indexed: 12/27/2022]
Abstract
Photosynthesis involves capturing light energy and, most often, converting it to chemical energy stored as reduced carbon. It is the source of food, fuel, and fiber and there is a resurgent interest in basic research on photosynthesis. Plants make excellent use of visible light energy; leaves are ideally suited to optimize light use by having a large area per amount of material invested and also having leaf angles to optimize light utilization. It is thought that plants do not use green light but in fact they use green light better than blue light under some conditions. Leaves also have mechanisms to protect against excess light and how these work in a stochastic light environment is currently a very active area of current research. The speed at which photosynthesis can begin when leaves are first exposed to light and the speed of induction of protective mechanisms, as well as the speed at which protective mechanisms dissipate when light levels decline, have recently been explored. Research is also focused on reducing wasteful processes such as photorespiration, when oxygen instead of carbon dioxide is used. Some success has been reported in altering the path of carbon in photorespiration but on closer inspection there appears to be unforeseen effects contributing to the good news. The stoichiometry of interaction of light reactions with carbon metabolism is rigid and the time constants vary tremendously presenting large challenges to regulatory mechanisms. Regulatory mechanisms will be the topic of photosynthesis research for some time to come.
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10
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Lu Z, Ren T, Li J, Hu W, Zhang J, Yan J, Li X, Cong R, Guo S, Lu J. Nutrition-mediated cell and tissue-level anatomy triggers the covariation of leaf photosynthesis and leaf mass per area. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:6524-6537. [PMID: 32725164 DOI: 10.1093/jxb/eraa356] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 07/22/2020] [Indexed: 06/11/2023]
Abstract
Plants in nutrient-poor habitats converge towards lower rates of leaf net CO2 assimilation (Aarea); however, they display variability in leaf mass investment per area (LMA). How a plant optimizes its leaf internal carbon investment may have knock-on effects on structural traits and, in turn, affect leaf carbon fixation. Quantitative models were applied to evaluate the structural causes of variations in LMA and their relevance to Aarea in rapeseed (Brassica napus) based on their responses to nitrogen (N), phosphorus (P), potassium (K), and boron (B) deficiencies. Leaf carbon fixation decreased in response to nutrient deficiency, but the photosynthetic limitations varied greatly depending on the deficient nutrient. In comparison with Aarea, the LMA exhibited diverse responses, being increased under P or B deficiency, decreased under K deficiency, and unaffected under N deficiency. These variations were due to changes in cell- and tissue-level carbon investments between cell dry mass density (N or K deficiency) and cellular anatomy, including cell dimension and number (P deficiency), or both (B deficiency). However, there was a conserved pattern independent of nutrient-specific limitations-low nutrient availability reduced leaf carbon fixation but increased carbon investment in non-photosynthetic structures, resulting in larger but fewer mesophyll cells with a thicker cell wall but a lower chloroplast surface area appressed to the intercellular airspace, which reduced the mesophyll conductance and feedback-limited Aarea. Our results provide insight into the importance of mineral nutrients in balancing the leaf carbon economy by coordinating leaf carbon assimilation and internal distribution.
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Affiliation(s)
- Zhifeng Lu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Tao Ren
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Jing Li
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Wenshi Hu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Jianglin Zhang
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Jinyao Yan
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Xiaokun Li
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Rihuan Cong
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Shiwei Guo
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Nanjing, China
| | - Jianwei Lu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
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11
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Ye ZP, Kang HJ, An T, Duan HL, Wang FB, Yang XL, Zhou SX. Modeling Light Response of Electron Transport Rate and Its Allocation for Ribulose Biphosphate Carboxylation and Oxygenation. FRONTIERS IN PLANT SCIENCE 2020; 11:581851. [PMID: 33042194 PMCID: PMC7522219 DOI: 10.3389/fpls.2020.581851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Accepted: 08/25/2020] [Indexed: 06/11/2023]
Abstract
Accurately describing the light response curve of electron transport rate (J-I curve) and allocation of electron flow for ribulose biphosphate (RuBP) carboxylation (J C-I curve) and that for oxygenation (J O-I curve) is fundamental for modeling of light relations of electron flow at the whole-plant and ecosystem scales. The non-rectangular hyperbolic model (hereafter, NH model) has been widely used to characterize light response of net photosynthesis rate (A n; A n-I curve) and J-I curve. However, NH model has been reported to overestimate the maximum A n (A nmax) and the maximum J (J max), largely due to its asymptotic function. Meanwhile, few efforts have been delivered for describing J C-I and J O-I curves. The long-standing challenge on describing A n-I and J-I curves have been resolved by a recently developed A n-I and J-I models (hereafter, Ye model), which adopt a nonasymptotic function. To test whether Ye model can resolve the challenge of NH model in reproducing J-I, J C-I and J O-I curves over light-limited, light-saturated, and photoinhibitory I levels, we compared the performances of Ye model and NH model against measurements on two C3 crops (Triticum aestivum L. and Glycine max L.) grown in field. The results showed that NH model significantly overestimated the A nmax and J max for both species, which can be accurately obtained by Ye model. Furthermore, NH model significantly overestimated the maximum electron flow for carboxylation (J C-max) but not the maximum electron flow for oxygenation (J O-max) for both species, disclosing the reason underlying the long-standing problem of NH model-overestimation of J max and A nmax.
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Affiliation(s)
- Zi-Piao Ye
- Maths and Physics College, Jinggangshan University, Ji’an, China
| | - Hua-Jing Kang
- Department of Landscape and Water Conservancy Engineering, Wenzhou Vocational College of Science and Technology, Wenzhou, China
| | - Ting An
- Maths and Physics College, Jinggangshan University, Ji’an, China
| | - Hong-Lang Duan
- Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang, China
| | - Fu-Biao Wang
- Maths and Physics College, Jinggangshan University, Ji’an, China
| | - Xiao-Long Yang
- Maths and Physics College, Jinggangshan University, Ji’an, China
| | - Shuang-Xi Zhou
- The New Zealand Institute for Plant and Food Research Limited, Hawke’s Bay, New Zealand
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12
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Herrmann HA, Schwartz JM, Johnson GN. From empirical to theoretical models of light response curves - linking photosynthetic and metabolic acclimation. PHOTOSYNTHESIS RESEARCH 2020; 145:5-14. [PMID: 31654195 PMCID: PMC7308256 DOI: 10.1007/s11120-019-00681-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Accepted: 10/04/2019] [Indexed: 05/08/2023]
Abstract
Light response curves (LRCs) describe how the rate of photosynthesis varies as a function of light. They provide information on the maximum photosynthetic capacity, quantum yield, light compensation point and leaf radiation use efficiency of leaves. Light response curves are widely used to capture photosynthetic phenotypes in response to changing environmental conditions. However, models describing these are predominantly empirical and do not attempt to explain behaviour at a mechanistic level. Here, we use modelling to understand the metabolic changes required for photosynthetic acclimation to changing environmental conditions. Using a simple kinetic model, we predicted LRCs across the physiological temperature range of Arabidopsis thaliana and confirm these using experimental data. We use our validated metabolic model to make novel predictions about the metabolic changes of temperature acclimation. We demonstrate that NADPH utilization are enhanced in warm-acclimated plants, whereas both NADPH and CO2 utilization is enhanced in cold-acclimated plants. We demonstrate how different metabolic acclimation strategies may lead to the same photosynthetic response across environmental change. We further identify that certain metabolic acclimation strategies, such as NADPH utilization, are only triggered when plants are moved beyond a threshold high or low temperature.
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Affiliation(s)
- Helena A. Herrmann
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, M13 9PT UK
- Division of Evolution & Genomic Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, M13 9PT UK
| | - Jean-Marc Schwartz
- Division of Evolution & Genomic Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, M13 9PT UK
| | - Giles N. Johnson
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, M13 9PT UK
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13
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Zhang JY, Cun Z, Chen JW. Photosynthetic performance and photosynthesis-related gene expression coordinated in a shade-tolerant species Panax notoginseng under nitrogen regimes. BMC PLANT BIOLOGY 2020; 20:273. [PMID: 32593292 PMCID: PMC7321538 DOI: 10.1186/s12870-020-02434-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Accepted: 05/10/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Nitrogen (N) is an essential component of photosynthetic apparatus. However, the mechanism that photosynthetic capacity is suppressed by N is not completely understood. Photosynthetic capacity and photosynthesis-related genes were comparatively analyzed in a shade-tolerant species Panax notoginseng grown under the levels of low N (LN), moderate N (MN) and high N (HN). RESULTS Photosynthetic assimilation was significantly suppressed in the LN- and HN-grown plants. Compared with the MN-grown plants, the HN-grown plants showed thicker anatomic structure and larger chloroplast accompanied with decreased ratio of mesophyll conductance (gm) to Rubisco content (gm/Rubisco) and lower Rubisco activity. Meanwhile, LN-grown plants displayed smaller chloroplast and accordingly lower internal conductance (gi). LN- and HN-grown individuals allocated less N to light-harvesting system (NL) and carboxylation system (NC), respectively. N surplus negatively affected the expression of genes in Car biosynthesis (GGPS, DXR, PSY, IPI and DXS). The LN individuals outperformed others with respect to non-photochemical quenching. The expression of genes (FBA, PGK, RAF2, GAPC, CAB, PsbA and PsbH) encoding enzymes of Calvin cycle and structural protein of light reaction were obviously repressed in the LN individuals, accompanying with a reduction in Rubisco content and activity. Correspondingly, the expression of genes encoding RAF2, RPI4, CAB and PetE were repressed in the HN-grown plants. CONCLUSIONS LN-induced depression of photosynthetic capacity might be caused by the deceleration on Calvin cycle and light reaction of photosynthesis, and HN-induced depression of ones might derive from an increase in the form of inactivated Rubisco.
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Affiliation(s)
- Jin-Yan Zhang
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, 650201, China
- Key Laboratory of Medical Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, 650201, China
- National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, 650201, China
| | - Zhu Cun
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, 650201, China
- Key Laboratory of Medical Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, 650201, China
- National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, 650201, China
| | - Jun-Wen Chen
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, 650201, China.
- Key Laboratory of Medical Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, 650201, China.
- National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, 650201, China.
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14
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Verryckt LT, Ellsworth DS, Vicca S, Van Langenhove L, Peñuelas J, Ciais P, Posada JM, Stahl C, Coste S, Courtois EA, Obersteiner M, Chave J, Janssens IA. Can light‐saturated photosynthesis in lowland tropical forests be estimated by one light level? Biotropica 2020. [DOI: 10.1111/btp.12817] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | - David S. Ellsworth
- Hawkesbury Institute for the Environment Western Sydney University Penrith NSW Australia
| | - Sara Vicca
- Department of Biology University of Antwerp Wilrijk Belgium
| | | | - Josep Peñuelas
- CREAF Barcelona Spain
- CSIC Global Ecology CREAF‐CSIC‐UAB Barcelona Spain
| | - Philippe Ciais
- Laboratoire des Sciences du Climat et de l’Environnement CEA‐CNRS‐UVSQ Gif‐sur‐Yvette France
| | - Juan M. Posada
- Biology Department Faculty of Natural Sciences Universidad del Rosario Bogotá, D.C. Colombia
| | - Clément Stahl
- INRA UMR Ecofog AgroParisTech CNRS Cirad Université des AntillesUniversité de Guyane Kourou France
| | - Sabrina Coste
- UMR Ecofog AgroParisTech CNRS Cirad INRA Université de GuyaneUniversité des Antilles Kourou France
| | - Elodie A. Courtois
- Laboratoire Ecologie, évolution, interactions des systèmes amazoniens (LEEISA) CNRS IFREMER Université de Guyane Cayenne French Guiana
| | - Michael Obersteiner
- International Institute for Applied Systems Analysis (IIASA) Laxenburg Austria
| | - Jérôme Chave
- UMR 5174 Laboratoire Evolution et Diversité Biologique CNRS Université Paul Sabatier Toulouse France
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15
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Zhu L, Cernusak LA, Song X. Dynamic responses of gas exchange and photochemistry to heat interference during drought in wheat and sorghum. FUNCTIONAL PLANT BIOLOGY : FPB 2020; 47:611-627. [PMID: 32393434 DOI: 10.1071/fp19242] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Accepted: 01/14/2020] [Indexed: 06/11/2023]
Abstract
Drought and heat stress significantly affect crop growth and productivity worldwide. It is unknown how heat interference during drought affects physiological processes dynamically in crops. Here we focussed on gas exchange and photochemistry in wheat and sorghum in response to simulated heat interference via +15°C of temperature during ~2 week drought and re-watering. Results showed that drought decreased net photosynthesis (Anet), stomatal conductance (gs), maximum velocity of ribulose-1, 5-bisphosphate carboxylase/oxygenase carboxylation (Vcmax) and electron transport rate (J) in both wheat and sorghum. Heat interference did not further reduce Anet or gs. Drought increased non-photochemical quenching (Φnpq), whereas heat interference decreased Φnpq. The δ13C of leaf, stem and roots was higher in drought-treated wheat but lower in drought-treated sorghum. The results suggest that (1) even under drought conditions wheat and sorghum increased or maintained gs for transpirational cooling to alleviate negative effects by heat interference; (2) non-photochemical quenching responded differently to drought and heat stress; (3) wheat and sorghum responded in opposing patterns in δ13C. These findings point to the importance of stomatal regulation under heat crossed with drought stress and could provide useful information on development of better strategies to secure crop production for future climate change.
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Affiliation(s)
- Lingling Zhu
- Shenzhen Key Laboratory of Marine Biological Resources and Ecological Environment, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, 518060, China; and Key Laboratory of Optoelectronic Devices and Systems of Ministry of Education and Guangdong Province, College of Optoelectronic Engineering, Shenzhen University, Shenzhen, 518060, China
| | - Lucas A Cernusak
- College of Science and Engineering, James Cook University, Cairns, Australia
| | - Xin Song
- Shenzhen Key Laboratory of Marine Biological Resources and Ecological Environment, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, 518060, China; and Corresponding author.
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16
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Tomeo NJ, Rosenthal DM. Photorespiration differs among Arabidopsis thaliana ecotypes and is correlated with photosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2018; 69:5191-5204. [PMID: 30053111 PMCID: PMC6184796 DOI: 10.1093/jxb/ery274] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2018] [Accepted: 07/16/2018] [Indexed: 05/19/2023]
Abstract
A greater understanding of natural variation in photosynthesis will inform strategies for crop improvement by revealing overlooked opportunities. We use Arabidopsis thaliana ecotypes as a model system to assess (i) how photosynthesis and photorespiration covary and (ii) how mesophyll conductance influences water use efficiency (WUE). Phenotypic variation in photorespiratory CO2 efflux was correlated with assimilation rates and two metrics of photosynthetic capacity (i.e. VCmax and Jmax); however, genetic correlations were not detected between photosynthesis and photorespiration. We found standing genetic variation-as broad-sense heritability-for most photosynthetic traits, including photorespiration. Genetic correlation between photosynthetic electron transport and carboxylation capacities indicates that these traits are genetically constrained. Winter ecotypes had greater mesophyll conductance, maximum carboxylation capacity, maximum electron transport capacity, and leaf structural robustness when compared with spring ecotypes. Stomatal conductance varied little in winter ecotypes, leading to a positive correlation between integrated WUE and mesophyll conductance. Thus, variation in mesophyll conductance can modulate WUE among A. thaliana ecotypes without a significant loss in assimilation. Genetic correlations between traits supplying energy and carbon to the Calvin-Benson cycle are consistent with biochemical models, suggesting that selection on either of these traits would improve all of them. Similarly, the lack of a genetic correlation between photosynthesis and photorespiration suggests that the positive scaling of these two traits can be broken.
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Affiliation(s)
- Nicholas J Tomeo
- Ohio University, Department of Environmental and Plant Biology, Athens, OH, USA
| | - David M Rosenthal
- Ohio University, Department of Environmental and Plant Biology, Athens, OH, USA
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17
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Urban L, Aarrouf J, Bidel LPR. Assessing the Effects of Water Deficit on Photosynthesis Using Parameters Derived from Measurements of Leaf Gas Exchange and of Chlorophyll a Fluorescence. FRONTIERS IN PLANT SCIENCE 2017; 8:2068. [PMID: 29312367 PMCID: PMC5735977 DOI: 10.3389/fpls.2017.02068] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Accepted: 11/20/2017] [Indexed: 05/21/2023]
Abstract
Water deficit (WD) is expected to increase in intensity, frequency and duration in many parts of the world as a consequence of global change, with potential negative effects on plant gas exchange and growth. We review here the parameters that can be derived from measurements made on leaves, in the field, and that can be used to assess the effects of WD on the components of plant photosynthetic rate, including stomatal conductance, mesophyll conductance, photosynthetic capacity, light absorbance, and efficiency of absorbed light conversion into photosynthetic electron transport. We also review some of the parameters related to dissipation of excess energy and to rerouting of electron fluxes. Our focus is mainly on the techniques of gas exchange measurements and of measurements of chlorophyll a fluorescence (ChlF), either alone or combined. But we put also emphasis on some of the parameters derived from analysis of the induction phase of maximal ChlF, notably because they could be used to assess damage to photosystem II. Eventually we briefly present the non-destructive methods based on the ChlF excitation ratio method which can be used to evaluate non-destructively leaf contents in anthocyanins and flavonols.
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Affiliation(s)
- Laurent Urban
- UMR 95 Qualisud/Laboratoire de Physiologie des Fruits et Légumes, Université d'Avignon, Avignon, France
| | - Jawad Aarrouf
- UMR 95 Qualisud/Laboratoire de Physiologie des Fruits et Légumes, Université d'Avignon, Avignon, France
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18
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Moualeu-Ngangue DP, Chen TW, Stützel H. A new method to estimate photosynthetic parameters through net assimilation rate-intercellular space CO 2 concentration (A-C i ) curve and chlorophyll fluorescence measurements. THE NEW PHYTOLOGIST 2017; 213:1543-1554. [PMID: 27768807 DOI: 10.1111/nph.14260] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2016] [Accepted: 09/08/2016] [Indexed: 06/06/2023]
Abstract
Gas exchange (GE) and chlorophyll fluorescence (CF) measurements are widely used to noninvasively study photosynthetic parameters, for example the rates of maximum Rubisco carboxylation (Vcmax ), electron transport rate (J), daytime respiration (Rd ) and mesophyll conductance (gm ). Existing methods for fitting GE data (net assimilation rate-intercellular space CO2 concentration (A-Ci ) curve) are based on two assumptions: gm is unvaried with CO2 concentration in the intercellular space (Ci ); and light absorption (α) and the proportion of quanta absorbed by photosystem II (β) are constant in the data set. These may result in significant bias in estimating photosynthetic parameters. To avoid the above-mentioned hypotheses, we present a new method for fitting A-Ci curves and CF data simultaneously. This method was applied to a data set obtained from cucumber (Cucumis sativus) leaves of various leaf ages and grown under eight different light conditions. The new method had significantly lower root mean square error and a lower rate of failures compared with previously published methods (6.72% versus 24.1%, respectively) and the effect of light conditions on Vcmax and J was better observed. Furthermore, the new method allows the estimation of a new parameter, the fraction of incoming irradiance harvested by photosystem II, and the dependence of gm on Ci .
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Affiliation(s)
- Dany P Moualeu-Ngangue
- Institute for Horticultural Production Systems, Vegetable Systems Modelling Section, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Straße 2, D-30419, Hannover, Germany
| | - Tsu-Wei Chen
- Institute for Horticultural Production Systems, Vegetable Systems Modelling Section, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Straße 2, D-30419, Hannover, Germany
- INRA, UMR759 Laboratoire d'Ecophysiologie des Plantes sous Stress Environnementaux, Place Viala, F-34060, Montpellier, France
| | - Hartmut Stützel
- Institute for Horticultural Production Systems, Vegetable Systems Modelling Section, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Straße 2, D-30419, Hannover, Germany
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19
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Sharkey TD. What gas exchange data can tell us about photosynthesis. PLANT, CELL & ENVIRONMENT 2016; 39:1161-3. [PMID: 26390237 DOI: 10.1111/pce.12641] [Citation(s) in RCA: 95] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2015] [Revised: 09/04/2015] [Accepted: 09/10/2015] [Indexed: 05/21/2023]
Affiliation(s)
- Thomas D Sharkey
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, 48823, USA
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20
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Bellasio C, Beerling DJ, Griffiths H. An Excel tool for deriving key photosynthetic parameters from combined gas exchange and chlorophyll fluorescence: theory and practice. PLANT, CELL & ENVIRONMENT 2016; 39:1180-97. [PMID: 25923517 DOI: 10.1111/pce.12560] [Citation(s) in RCA: 51] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2014] [Revised: 02/10/2015] [Accepted: 02/25/2015] [Indexed: 05/23/2023]
Abstract
Combined photosynthetic gas exchange and modulated fluorometres are widely used to evaluate physiological characteristics associated with phenotypic and genotypic variation, whether in response to genetic manipulation or resource limitation in natural vegetation or crops. After describing relatively simple experimental procedures, we present the theoretical background to the derivation of photosynthetic parameters, and provide a freely available Excel-based fitting tool (EFT) that will be of use to specialists and non-specialists alike. We use data acquired in concurrent variable fluorescence-gas exchange experiments, where A/Ci and light-response curves have been measured under ambient and low oxygen. From these data, the EFT derives light respiration, initial PSII (photosystem II) photochemical yield, initial quantum yield for CO2 fixation, fraction of incident light harvested by PSII, initial quantum yield for electron transport, electron transport rate, rate of photorespiration, stomatal limitation, Rubisco (ribulose 1·5-bisphosphate carboxylase/oxygenase) rate of carboxylation and oxygenation, Rubisco specificity factor, mesophyll conductance to CO2 diffusion, light and CO2 compensation point, Rubisco apparent Michaelis-Menten constant, and Rubisco CO2 -saturated carboxylation rate. As an example, a complete analysis of gas exchange data on tobacco plants is provided. We also discuss potential measurement problems and pitfalls, and suggest how such empirical data could subsequently be used to parameterize predictive photosynthetic models.
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Affiliation(s)
- Chandra Bellasio
- Department of Animal and Plant Sciences, University of Sheffield, Sheffield, S10 2TN, UK
| | - David J Beerling
- Department of Animal and Plant Sciences, University of Sheffield, Sheffield, S10 2TN, UK
| | - Howard Griffiths
- Department of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK
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21
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Sperlich D, Barbeta A, Ogaya R, Sabaté S, Peñuelas J. Balance between carbon gain and loss under long-term drought: impacts on foliar respiration and photosynthesis in Quercus ilex L. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:821-33. [PMID: 26552882 PMCID: PMC4737074 DOI: 10.1093/jxb/erv492] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Terrestrial carbon exchange is a key process of the global carbon cycle consisting of a delicate balance between photosynthetic carbon uptake and respiratory release. We have, however, a limited understanding how long-term decreases in precipitation induced by climate change affect the boundaries and mechanisms of photosynthesis and respiration. We examined the seasonality of photosynthetic and respiratory traits and evaluated the adaptive mechanism of the foliar carbon balance of Quercus ilex L. experiencing a long-term rainfall-exclusion experiment. Day respiration (Rd) but not night respiration (Rn) was generally higher in the drought treatment leading to an increased Rd/Rn ratio. The limitation of mesophyll conductance (gm) on photosynthesis was generally stronger than stomatal limitation (gs) in the drought treatment, reflected in a lower gm/gs ratio. The peak photosynthetic activity in the drought treatment occurred in an atypical favourable summer in parallel with lower Rd/Rn and higher gm/gs ratios. The plant carbon balance was thus strongly improved through: (i) higher photosynthetic rates induced by gm; and (ii) decreased carbon losses mediated by Rd. Interestingly, photosynthetic potentials (Vc,max, Jmax, and TPU) were not affected by the drought treatment, suggesting a dampening effect on the biochemical level in the long term. In summary, the trees experiencing a 14-year-long drought treatment adapted through higher plasticity in photosynthetic and respiratory traits, so that eventually the atypical favourable growth period was exploited more efficiently.
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Affiliation(s)
- D Sperlich
- Departament d'Ecologia, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - A Barbeta
- CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain CSIC, Global Ecology Unit CREAF-CSIC-UAB, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - R Ogaya
- CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain CSIC, Global Ecology Unit CREAF-CSIC-UAB, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - S Sabaté
- Departament d'Ecologia, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - J Peñuelas
- CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain CSIC, Global Ecology Unit CREAF-CSIC-UAB, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
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22
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Sperlich D, Chang CT, Peñuelas J, Gracia C, Sabaté S. Seasonal variability of foliar photosynthetic and morphological traits and drought impacts in a Mediterranean mixed forest. TREE PHYSIOLOGY 2015; 35:501-20. [PMID: 25836361 DOI: 10.1093/treephys/tpv017] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2014] [Accepted: 01/29/2015] [Indexed: 05/24/2023]
Abstract
The Mediterranean region is a hot spot of climate change vulnerable to increased droughts and heat waves. Scaling carbon fluxes from leaf to landscape levels is particularly challenging under drought conditions. We aimed to improve the mechanistic understanding of the seasonal acclimation of photosynthesis and morphology in sunlit and shaded leaves of four Mediterranean trees (Quercus ilex L., Pinus halepensis Mill., Arbutus unedo L. and Quercus pubescens Willd.) under natural conditions. Vc,max and Jmax were not constant, and mesophyll conductance was not infinite, as assumed in most terrestrial biosphere models, but varied significantly between seasons, tree species and leaf position. Favourable conditions in winter led to photosynthetic recovery and growth in the evergreens. Under moderate drought, adjustments in the photo/biochemistry and stomatal/mesophyllic diffusion behaviour effectively protected the photosynthetic machineries. Severe drought, however, induced early leaf senescence mostly in A. unedo and Q. pubescens, and significantly increased leaf mass per area in Q. ilex and P. halepensis. Shaded leaves had lower photosynthetic potentials but cushioned negative effects during stress periods. Species-specificity, seasonal variations and leaf position are key factors to explain vegetation responses to abiotic stress and hold great potential to reduce uncertainties in terrestrial biosphere models especially under drought conditions.
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Affiliation(s)
- D Sperlich
- Departament d'Ecologia, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - C T Chang
- Departament d'Ecologia, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - J Peñuelas
- CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain CSIC, global Ecology Unit CREAF-CSIC-UAB, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - C Gracia
- Departament d'Ecologia, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
| | - S Sabaté
- Departament d'Ecologia, Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain CREAF, Cerdanyola del Vallès, 08193 Barcelona, Catalonia, Spain
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