A global map of human impact on marine ecosystems

Cyanobacteria-cyanophage interactions between freshwater and marine ecosystems based on large-scale cyanophage genomic analysis

The disparities in harmful algal blooms dynamics are largely attributed to variations in cyanobacteria populations within aquatic ecosystems. However, cyanobacteria-cyanophage interactions and their role in shaping cyanobacterial populations has been previously underappreciated. To address this knowledge gap, we isolated and sequenced 42 cyanophages from diverse water sources in China, with the majority (n = 35) originating from freshwater sources. We designated these sequences as the "Novel Cyanophage Genome sequence Collection" (NCGC). NCGC displayed notable genetic variations, with 95 % (40/42) of the sequences representing previously unidentified taxonomic ranks. By integrating NCGC with public data of cyanophages and cyanobacteria, we found evidence for more frequent historical cyanobacteria-cyanophage interactions in freshwater ecosystems. This was evidenced by a higher prevalence of prophage integrase-related genes in freshwater cyanophages (37.97 %) than marine cyanophages (7.42 %). In addition, freshwater cyanophages could infect a broader range of cyanobacteria orders (n = 4) than marine ones (n = 0). Correspondingly, freshwater cyanobacteria harbored more defense systems per million base pairs in their genomes, indicating more frequent phage infections. Evolutionary and cyanophage epidemiological studies suggest that interactions between cyanobacteria and cyanophages in freshwater and marine ecosystems are interconnected, and that brackish water can act as a transitional zone for freshwater and marine cyanophages. In conclusion, our research significantly expands the genetic information database of cyanophage, offering a wider selection of cyanophages to control harmful cyanobacterial blooms. Additionally, we represent a pioneering large-scale and comprehensive analysis of cyanobacteria and cyanophage sequencing data, and it provides theoretical guidance for the application of cyanophages in different environments.

Spatial and seasonal variability in benthic impact of mussel farms: Predicting and mitigating impacts using ambient oxygen conditions

Environmental impacts are a cause for concern when developing and expanding aquaculture and to be sustainable potential negative effects need to be addressed. The intensity and extent of these impacts likely vary among sites and seasons, depending on multiple factors including the physical and biological setting and operational aspects. Using a combination of sampling techniques, we investigated the spatial variability in epibenthic impacts in eleven commercial mussel farms, on the Swedish west coast. We found increased levels of organic content, changes in epibenthic macrofauna and increased cover of Beggiatoa sp., a documented indicator of hypoxia. The extent of these impacts was generally limited to the extent of the farms. Because the cover of Beggiatoa sp. was particularly clear and because oxygen conditions in the sediment is of great importance to the structure and function of these habitats, we analysed spatial patterns using an index of the benthic footprint (BFI) accounting for both intensity and extent of impacts. In the summer, the BFI varied strongly among farm-sites and subsequent analyses showed that it highly correlated with ambient bottom oxygen concentration. Repeated sampling during early spring, however, showed that impacts were quickly reversible also in the most impacted sites. Thus, we conclude that in Swedish coastal waters the benthic footprint calculated on the % cover of Beggiatoa sp. is highly dependent on ambient oxygen concentration. We suggest that knowledge about spatial and temporal patterns of oxygen in the bottom water can be used to predict the severity of impacts and provide an important criterion in a site-selection process aimed at developing a sustainable food industry.

Effect of biodegradable and conventional microplastic exposure in combination with seawater inundation on the coastal terrestrial plant Plantago coronopus

Coastal ecosystems face a multitude of pressures including plastic pollution and increased flood risk due to sea level rise and the frequency and severity of storms. Experiments seldom examine multiple stressors such as these, but here we quantified the effect of microplastics (polyethylene terephthalate (PET): a durable plastic and polybutylene adipate terephthalate (PBAT): a biodegradable polymer), in combination with simulated seawater inundation on the coastal species Plantago coronopus. After 35-days exposure to plastic (0.02 g.Kg-1, <300 μm diameter), P. coronopus were flooded to pot height with artificial seawater for 72-h, drained and grown for a further 24-days. Plant mortality, necrosis and photosynthetic efficiency (Fv/Fm) were recorded throughout, with root:shoot biomass and scape production (flower stalks) quantified at harvest. There were significant interactions between microplastics and seawater on the root:shoot ratio; a measure of resource allocation. The allocation to belowground biomass increased significantly under the PET + inundation treatment compared to the PBAT + inundation and the no plastic + inundation treatments, with potential consequences on the capture of water, nutrients and sunlight, which can affect plant performance. Plant necrosis significantly increased, and Fv/Fm declined as a result of seawater inundation. While not significant, plant Fv/Fm responses were influenced by microplastics (17% and 7% reduction in PBAT and PET exposure respectively compared to the no plastic control). Plants mediated this stress response with no discernible treatment-specific effects detected in Fv/Fm 14-days after seawater introduction. Plastic exposure significantly influenced potential reproductive output, with lower average scape numbers across PBAT treatments, but higher in PET treatments. This study highlights the complex interactions and potential for microplastics to present an elevated risk when in combination with additional stressors like seawater flooding; establishing the threat presented to ecosystem resilience in a changing world is a priority.

Detection of 10 commonly used pharmaceuticals in reef-building stony corals from shallow (5-12 m) and deep (30-40 m) sites in the Red Sea

Although pharmaceutically-active compounds (PhACs) are increasingly being found to be present in marine environments, their presence in coral reefs, already under threat from various stressors, has remains unexplored. This study focused on PhAC presence in two stony-coral genera, collected from different depths and sites in the Red Sea. The findings reveal the presence of ten different PhACs, with elevated concentrations detected in corals from shallow sites and in areas with heavy human activity. Notably, all samples contained at least one PhAC, with the antibiotic sulfamethoxazole being the most prevalent compound, detected in 93% of the samples, at concentrations ranging from 1.5 to 2080 ng/g dry weight (dw) tissue, with an average concentration of 106 ng/g dw. These findings underscore the urgent need for conservation initiatives aimed at protecting coral-reef ecosystems from the escalating threat of anthropogenic contamination, including such potential risks as the development of antibiotic resistance in marine organisms and the disruption of critical spawning synchrony among coral populations.

Phthalates and fatty acid markers in free-ranging cetaceans from an insular oceanic region: Ecological niches as drivers of contamination

Plastic additives, such as phthalates, are ubiquitous contaminants that can have detrimental impacts on marine organisms and overall ecosystems' health. Valuable information about the status and resilience of marine ecosystems can be obtained through the monitoring of key indicator species, such as cetaceans. In this study, fatty acid profiles and phthalates were examined in blubber biopsies of free-ranging individuals from two delphinid species (short-finned pilot whale - Globicephala macrorhynchus, n = 45; common bottlenose dolphin - Tursiops truncatus, n = 39) off Madeira Island (NE Atlantic). This investigation aimed to explore the relations between trophic niches (epipelagic vs. mesopelagic), contamination levels, and the health status of individuals within different ecological and biological groups (defined by species, residency patterns and sex). Multivariate analysis of selected dietary fatty acids revealed a clear niche segregation between the two species. Di-n-butylphthalate (DBP), diethyl phthalate (DEP), and bis(2-ethylhexyl) phthalate (DEHP) were the most prevalent among the seven studied phthalates, with the highest concentration reached by DEHP in a bottlenose dolphin (4697.34 ± 113.45 ng/g). Phthalates esters (PAEs) concentration were higher in bottlenose dolphins (Mean ∑ PAEs: 947.56 ± 1558.34 ng/g) compared to pilot whales (Mean ∑ PAEs: 229.98 ± 158.86 ng/g). In bottlenose dolphins, DEHP was the predominant phthalate, whereas in pilot whales, DEP and DBP were more prevalent. Health markers suggested pilot whales might suffer from poorer physiological conditions than bottlenose dolphins, although high metabolic differences were seen between the two species. Phthalate levels showed no differences by ecological or biological groups, seasons, or years. This study is the first to assess the extent of plastic additive contamination in free-ranging cetaceans from a remote oceanic island system, underscoring the intricate relationship between ecological niches and contaminant exposure. Monitoring these chemicals and their potential impacts is vital to assess wild population health, inform conservation strategies, and protect critical species and habitats.

Disentangling the effect of space, time, and environmental and anthropogenic drivers on coastal macrobenthic β diversity in contrasting habitats over 15 years

Coastal zones are biodiversity hotspots and deliver essential ecosystem functions and services, yet they are exposed to multiple and interacting anthropogenic and environmental constraints. The individual and cumulative effects of these constraints on benthic communities, a key component of coastal ecosystems, and their variability across space and time, remains to be thoroughly quantified to guide conservation actions. Here, we explored how the presence of biogenic habitats influences the response of benthic communities to natural and anthropogenic constraints. We investigated this effect in both intertidal and subtidal habitats exposed to different pressures. We used data collected in the North-East Atlantic over 15 years (2005-2019) as part of the REBENT monitoring program, covering 38 sites of bare sediments, intertidal seagrass beds and maerl beds. We collected a range of environmental variables and proxies of anthropogenic pressures and used variation and hierarchical partitioning with redundancy analyses to estimate their relative effect on macrobenthic communities. We used descriptors modeling spatial and temporal structures (dbMEMs) to explore the scale of their effects and potential missing predictors. The selected variables explained between 53 % and 64 % of macrobenthic β diversity depending on habitat and depth. Fishing pressures, sedimentary and hydrodynamics variables stood out as the most important predictors across all habitats while proxies of anthropogenic pressures were overall more important in intertidal habitats. In the intertidal, presence of biogenic habitat strongly modulated the amount of explained variance and the identity of the selected variable. Across both tidal levels, analysis of models' residuals further indicated that biogenic habitats might mitigate the effect of extreme environmental events. Our study provides a hierarchy of the most important drivers of benthic communities across different habitats and tidal levels, emphasizing the prominence of anthropogenic pressures on intertidal communities and the role of biogenic habitats in mitigating environmental changes.

Tracing troubles: Unveiling the hidden impact of inorganic contamination on juvenile green sea turtle

Human activities and climate change have negatively affected the world's oceans, leading to a decline of 30 to 60 % in coastal ecosystems' biodiversity and habitats. The projected increase in the human population to 9.7 billion by 2050 raises concerns about the sustainability of marine ecosystem conservation and exploitation. Marine turtles, as sentinel species, accumulate contaminants, including trace elements, due to their extensive migration and long-life span. However, there is a lack of data on the degree of contamination and their effects on marine turtles' health. This study focuses on assessing in-situ inorganic contamination in juvenile green sea turtles from La Réunion Island and its short-term impact on individual health, using conventional biomarkers and proteomics. The goals include examining contamination patterns in different tissues and identifying potential new biomarkers for long-term monitoring and conservation efforts. The study identified differential metal contamination between blood and scute samples, which could help illuminate temporal exposure to trace elements in turtle individuals. We also found that some conventional biomarkers were related to trace element exposure, while the proteome responded differently to various contaminant mixtures. Immune processes, cellular organization, and metabolism were impacted, indicating that contaminant mixtures in the wild would have an effect on turtle's health. Fifteen biomarker candidates associated with strong molecular responses of sea turtle to trace element contamination are proposed for future long-term monitoring. The findings emphasize the importance of using proteomic approaches to detect subtle physiological responses to contaminants in the wild and support the need for non-targeted analysis of trace elements in the biomonitoring of sea turtle health.

Polychlorinated biphenyls (PCBs) in the Persian Gulf and Gulf of Oman: baseline report on occurrence, distribution, and ecological risk assessment

In the present study, 18 polychlorinated biphenyl (PCB) compounds were measured in marine sediments collected from 49 offshore stations in the Persian Gulf and the Gulf of Oman in 2019. After the last oceanographic cruise in 2006, no study has been performed on the offshore sediments of this region, and this is the first study on the PCBs in this area. The total amount of PCB compounds in the sediment samples ranged from 74.38 ng kg-1 (near Abu Musa Island) to 1212.98 ng kg-1 (near Siri and Kish Island). The maximum and minimum values of the individual detected PCB compounds were 175.88 ng kg-1 (PCB52) and 2.09 ng kg-1 (PCB156), respectively. The levels of total PCBs detected in sediments were lower than the Canadian interim sediment quality guideline value of 21500 ng kg-1 for marine sediments. The sedimentary mass inventories for Σ18PCBs were 0.6 and 0.2 mt for the Persian Gulf and Gulf of Oman, respectively.

The quantifying, mapping, and risk analysis of human-related stressors in the high seas

Objectives: Marine biodiversity and ecosystem services in the high seas are threatened by numerous stress factors caused by human activities, including global shipping, high-sea fishing, marine plastic pollution, and anthropogenic climate change. Socioeconomic factors are one of the criteria for the establishment of area-based management tools in the high seas for marine biodiversity conservation beyond national jurisdiction. The aim of the work is to propose a spatiotemporal approach to identify risks from marine human activities and recommendations for high seas governance. Methods: Data related to human activities from 2014 to 2022 were used to calculate the distribution and changes of human-related stressors, and the risk to marine biodiversity in the high seas caused by human activities. Results: The North Atlantic, Philippine Sea, Arabian Sea, Bay of Bengal, and East Central Atlantic show high and increasing intensities of human-related stressors, and are therefore particularly at need for the protection and conservation of marine biodiversity. Risks from human activities vary within the marine areas that are prioritized for biodiversity protection. The study recommends that the designation of high seas protected areas should take into account the types of risks to which the different marine areas are exposed, and that the high seas protected areas should be established gradually. At the same time, appropriate management measures should be formulated according to the intensity of human activities in the different marine areas. Conclusions: Quantifying and classifying the risk from human-related stressors could help identify solution for the protection and conservation and facilitate the marine spatial planning, establishment area based management tools, including marine protected areas in the high seas.

Effects of seismic water guns on the peristomial membrane of sea urchins (Arbacia lixula, Linnaeus 1758)

The seismic water gun is widely used and plays an important role in seabed imaging acquisition; however, acoustic impacts on marine organisms are currently poorly understood. The aim of this study was to analyse the biochemical responses on the peristomial membrane (PM) of the sea urchin, Arbacia lixula, when exposed to water gun shots in open water. The PM (located around the mouth) is involved in vital functions, such as nutrition and protection. Individuals of sea urchins (n = 7 for each time slot) were sampled before, at the end, and at intervals of 3 h and 24 h after acoustic emission (duration of 20 min). Significant increases in superoxide dismutase, peroxidase, esterase and alkaline were observed immediately after water gun shots, highlighting an increase in the oxidative and inflammatory state of the tissue. Our results showed that acoustic impacts could interfere with PM vital functions, compromising the health, survival and ultimately the conservation of the species. Understanding these effects is crucial to predicting consequences on sea urchin populations and marine ecosystems.

Cumulative human impacts on global marine fauna highlight risk to biological and functional diversity

Anthropogenic stressors to marine ecosystems from climate change and human activities increase extinction risk of species, disrupt ecosystem integrity, and threaten important ecosystem services. Addressing these stressors requires understanding where and to what extent they are impacting marine biological and functional diversity. We model cumulative risk of human impact upon 21,159 marine animal species by combining information on species-level vulnerability and spatial exposure to a range of anthropogenic stressors. We apply this species-level assessment of human impacts to examine patterns of species-stressor interactions within taxonomic groups. We then spatially map impacts across the global ocean, identifying locations where climate-driven impacts overlap with fishing, shipping, and land-based stressors to help inform conservation needs and opportunities. Comparing species-level modeled impacts to those based on marine habitats that represent important marine ecosystems, we find that even relatively untouched habitats may still be home to species at elevated risk, and that many species-rich coastal regions may be at greater risk than indicated from habitat-based methods alone. Finally, we incorporate a trait-based metric of functional diversity to identify where impacts to functionally unique species might pose greater risk to community structure and ecosystem integrity. These complementary lenses of species, function, and habitat provide a richer understanding of threats to marine biodiversity to help inform efforts to meet conservation targets and ensure sustainability of nature's contributions to people.

Environmental DNA metabarcoding reveals the influence of environmental heterogeneity on microeukaryotic plankton in the offshore waters of East China Sea

Microeukaryotic plankton are essential to marine food webs and biogeochemical cycles, with coastal seas playing a critical role in aquatic ecosystems. Understanding the diversity of microeukaryotic plankton, deciphering their community structure and succession patterns, and identifying the key factors influencing these dynamics remain central challenges in coastal ecology. In this study, we examine patterns of biodiversity, community structure, and co-occurrence using environmental DNA (eDNA)-based methods. Our results show a linear correlation between α-diversity and distance from the shore, with nutrient-related factors, especially inorganic nitrogen, being the primary determinants of the spatial distribution of plankton communities. Alternation of coastal habitat have shifted the succession patterns of coastal eukaryotic plankton communities from stochastic to deterministic processes. Additionally, our observations indicate that the topology and structure of eukaryotic plankton symbiotic patterns and networks are significantly influenced by environmental heterogeneity such as nutrients, which increase the vulnerability and decrease the stability of offshore ecological networks. Overall, our study demonstrates that the distribution of microeukaryotic plankton communities is influenced by factors related to environmental heterogeneity.

Diet characteristics of tidal creek-associated fishes of the northeastern Arabian Sea with special reference to microplastic ingestion

The present study assessed the diet characteristics, trophic guild structure, and microplastics (MPs) ingestion by a group of fish sourced from the tidal creeks of the Mumbai coast along the Eastern Arabian Sea. The diet patterns were characterized using gastro-somatic index (GaSI), relative length of gut (RGL), diet overlap (α), diet breadth (Bi), and relative abundance of food items (%IOP), with a special emphasis on MPs contamination. The findings revealed that teleost and shrimps are the most preferred food items for these species. Whereas MPs contribute 5.50% of the total diet composition of the selected fishes. Additionally, we tried to find out the influence of fish size and dietary attributes on MP ingestion, identifying trophic level as a significant factor influencing contamination levels. Using the Polymer Hazard Index (PHI), the potential risks posed by MPs in fish samples were assessed, revealing notable discrepancies among polymers. For instance, polyvinyl chloride showed the highest PHI score of 198.75 and a hazard score reaching the highest risk category (IV), indicating substantial environmental risk. In summary, our findings highlight the impact of fish diet characteristics on MPs contamination and the varying levels of MP risks along the Mumbai coast, categorized according to polymer type from low to high risk.

Spatiotemporal dynamics of ecosystem supply service intensity in China: Patterns, drivers, and implications for sustainable development

With the steady development of global economy and the rapid increase of population, it is of great significance to quantify the supply capacity of ecosystem services and reveal its driving factors for sustainable development. We quantify the ecosystem supply service intensity (ESSI) using multiple sources of natural and cultural data from 2000 to 2020. We then jointly analyze this data with the information entropy of the land to obtain the temporal and spatial evolution law of ESSI under multiple scales in China. At the same time, according to the spatial distribution of ESSI in China, the concept of China's ecosystem supply service intensity development equilibrium line (ESSIL) is innovatively put forward. The results show that the spatial distribution pattern of China's ESSI is symmetrical with the ESSIL which is nearly orthogonal to Hu Huanyong line. Because of the different regional development policies, different regions with different economic levels have different driving effects on land change. Furthermore, due to the country's large size, the primary ESSI drivers vary greatly throughout its various regions. The assessment of the ESSI changes in China from multi-scale, combined with the effects of land cover change, climate and human activities, and put forward a new pattern distribution mode of ESSI in China, which provides a new perspective for formulating ecologically sustainable development strategies in large-scale areas.

Arctic copepod copper sensitivity and comparison with Antarctic and temperate copepods

The ongoing global climate crisis increases temperatures in polar regions faster and with greater magnitude than elsewhere. The decline of Arctic sea ice opens up new passages, eventually leading to higher anthropogenic activities such as shipping, fishing, and mining. Climate change and anthropogenic activities will increase contaminant transport from temperate to Arctic regions. The shipping industry uses copper as an antifouling coating. Copper is an essential element but becomes toxic at excess concentrations, and its use may inadvertently affect non-target organisms such as copepods. Copper affects copepods by lowering reproductive output, prolonging developmental time, and causing increased mortality. As data on copper sensitivity of polar copepods at low temperatures are rare, we conducted onboard survival experiments with the Arctic region's most common copepod species (Calanus finmarchicus, C. glacialis, C. hyperboreus). Acute survival tests were done for up to 8 days on individuals in 70 ml bottles at 1 °C with nominal copper concentrations ranging from 3 to 480 μg L-1. We used a reduced General Unified Threshold model for Survival (GUTS) to analyse the data, and placed our results in the context of the few published copper sensitivity data of the Antarctic and temperate copepod species at low temperatures. The sensitivity of Cu exposure was similar between the three Calanus species. However, a model comparison suggests that the tested C. glacialis population is less sensitive than the other two species in our experiments. Compared to published data, the three Arctic species appear slightly less sensitive to copper compared to their Antarctic counterparts but more compared to their temperate ones. Our literature search revealed only a few available studies on the copper sensitivity of polar copepods. In the future, this species group will be exposed to more pollutants, which warrants more studies to predict potential risks, especially given possible interactions with environmental factors.

The complex effects of modern oncogenic environments on the fitness, evolution and conservation of wildlife species

Growing evidence indicates that human activities are causing cancer rates to rise in both human and wildlife populations. This is due to the inability of ancestral anti-cancer defences to cope with modern environmental risks. The evolutionary mismatch between modern oncogenic risks and evolved cancer defences has far-reaching effects on various biological aspects at different timeframes, demanding a comprehensive study of the biology and evolutionary ecology of the affected species. Firstly, the increased activation of anti-cancer defences leads to excessive energy expenditure, affecting other biological functions and potentially causing health issues like autoimmune diseases. Secondly, tumorigenesis itself can impact important fitness-related parameters such as competitiveness, predator evasion, resistance to parasites, and dispersal capacity. Thirdly, rising cancer risks can influence the species' life-history traits, often favoring early reproduction to offset fitness costs associated with cancer. However, this strategy has its limits, and it may not ensure the sustainability of the species if cancer risks continue to rise. Lastly, some species may evolve additional anti-cancer defences, with uncertain consequences for their biology and future evolutionary path. In summary, we argue that the effects of increased exposure to cancer-causing substances on wildlife are complex, ranging from immediate responses to long-term evolutionary changes. Understanding these processes, especially in the context of conservation biology, is urgently needed.

Effects of coastal development on sawfish movements and the need for marine animal crossing solutions

Although human-made barriers to animal movement are ubiquitous across many types of ecosystems, the science behind these barriers and how to ameliorate their effects lags far behind in marine environments compared with terrestrial and freshwater realms. Using juvenile sawfish in an Australian nursery habitat as a model system, we aimed to assess the effects of a major anthropogenic development on the movement behavior of coastal species. We compared catch rates and movement behavior (via acoustic telemetry) of juvenile green sawfish (Pristis zijsron) before and after a major coastal structure was built in an important nursery habitat. Acoustic tracking and catch data showed that the development did not affect levels of sawfish recruitment in the nursery, but it did constrain movements of juveniles moving throughout the nursery, demonstrating the reluctance of shoreline-associated species to travel around large or unfamiliar coastal structures. Given the current lack of information on human-made movement barriers in the marine environment, these findings highlight the need for further research in this area, and we propose the development of and experimentation with marine animal crossings as an important area of emerging research.

Assessing patterns of metazoans in the global ocean using environmental DNA

Documenting large-scale patterns of animals in the ocean and determining the drivers of these patterns is needed for conservation efforts given the unprecedented rates of change occurring within marine ecosystems. We used existing datasets from two global expeditions, Tara Oceans and Malaspina, that circumnavigated the oceans and sampled down to 4000 m to assess metazoans from environmental DNA (eDNA) extracted from seawater. We describe patterns of taxonomic richness within metazoan phyla and orders based on metabarcoding and infer the relative abundance of phyla using metagenome datasets, and relate these data to environmental variables. Arthropods had the greatest taxonomic richness of metazoan phyla at the surface, while cnidarians had the greatest richness in pelagic zones. Half of the marine metazoan eDNA from metagenome datasets was from arthropods, followed by cnidarians and nematodes. We found that mean surface temperature and primary productivity were positively related to metazoan taxonomic richness. Our findings concur with existing knowledge that temperature and primary productivity are important drivers of taxonomic richness for specific taxa at the ocean's surface, but these correlations are less evident in the deep ocean. Massive sequencing of eDNA can improve understanding of animal distributions, particularly for the deep ocean where sampling is challenging.

Biomonitoring of petroleum hydrocarbon residues in commercially important fish and shrimp species from a tropical coastal ecosystem Chilika, India: Associated human health risk assessment

Petroleum hydrocarbons (PHCs) residues in commercially important fish and shrimp species from Asia's largest brackish water lagoon, Chilika and their dietary risk factors like Bioaccumulation factor (BAF), Estimated dietary intake (EDI) and Exposure risk index (ERI) were investigated. The PHCs in water samples were found within the range of 2.21 to 9.41 μg/l; while in organisms, PHCs varied from 0.74 to 3.16 μg/g (wet weight). The lowest and highest PHCs concentration was observed in Etroplus suratensis (0.74 ± 0.12; crude fat 0.57 %) and Nematalosa nasus (3.16 ± 0.12; crude fat 6.43 %) respectively. From human health risk view point, the calculated BAF, EDI, ERI were within the prescribed safe limits. Our finding suggests that Nematalosa nasus can be used as biomonitor species for petroleum hydrocarbon contamination status for this ecosystem and also continuous pollution monitoring programs must be conducted by the concerned authorities to safeguard this important aquatic ecosystem.

Impacts of estuarine habitat degradation on the modeled life history of marine estuarine-dependent and resident fish species

Shallow coastal and estuarine habitats play an essential role in the life cycles of many fish species, providing spawning, nursery, feeding, and migration areas. However, these ecologically valuable habitats are increasingly threatened by anthropogenic activities, causing substantial changes in both habitat availability and quality. Fish species use these shallow coastal habitats and estuaries during various life stages, leading to their categorization into guilds based on how and when they rely on these areas. This differential functional use of estuaries means that changes to these habitats may affect each guild differently. To understand the impact of estuarine habitat degradation on fish populations, it is therefore necessary to consider the full life cycle of fish and when they rely on these coastal habitats. Here, we use conceptual size-structured population models to study how estuarine habitat degradation affects two functionally different guilds. We use these models to predict how reduced food productivity in the estuary affects the demographic rates and population dynamics of these groups. Specifically, we model estuarine residents, which complete their entire life cycle in estuaries, and marine estuarine-dependent species, which inhabit estuaries during early life before transitioning offshore. We find that total fish biomass for both guilds decreases with decreasing food productivity. However, the density of juveniles of the marine estuarine-dependent guild can, under certain conditions, increase in the estuary. This occurs due to a shift in the population biomass distribution over different life stages and a simultaneous shift in which life stage is most limited by food. At the individual level, somatic growth of juveniles belonging to the estuarine-dependent guild decreased with lower food supply in the estuary, due to increased competition for food. The somatic growth rates of fish belonging to the resident guild were largely unaffected by low food supply, as the total fish density decreased at the same time and therefore the per-capita food availability was similar. These outcomes challenge the assumption that responses to habitat degradation are similar between fish guilds. Our study highlights the need to assess not only fish biomass but also size distributions, survival, and somatic growth rates for a comprehensive understanding of the effects of habitat degradation on fish populations. This understanding is crucial not only for estuary fish communities but also for successful conservation and management of commercially harvested offshore population components.

Bioaccumulation of trace elements in marine mammals: New data and transplacental transfer on threatened species

Coastal areas are affected by urban, industrial and agriculture pollutants runoff, wastewater and stormwater discharges, making this environment the final repository of chemical contaminants. These contaminants have the potential to spread out to the entire food chain, impacting marine life and the quality of their habitat. In this aspect, the concept of marine mammals as bioindicators provides an approach to the degree of contamination in the environment and to the identification and management of multiple sources of contaminants. The present study analyzed several elements like As, Ba, Cd, Cr, Cu, Hg, Mn, Mo, Ni, Pb, V and Zn in liver tissue from two dolphin species: Sotalia guianensis, a near-threatened species, and the vulnerable Pontoporia blainvillei. In the study, we also investigated if dolphins (population) recorded using the heaviest urban areas have higher concentrations of contaminants in their tissues. Dolphin samples (n = 40 S. guianensis; n = 97 P. blainvillei) were collected by daily monitoring carried out by Santos Basin Beach Monitoring Project (PMP-BS), from stranded individuals found in São Paulo state. The Spearman's rank correlation showed distinct correlations in the accumulation of trace elements by both species, indicating different sources of exposure to the elements studied or distinct biochemical processes between species. Interspecific and intraspecific variations were observed, possibly related to the individual distribution and feeding habits. Correlations were observed between age and concentrations of trace elements, positive for Cd, Hg and Mo. Finally, our findings indicate high levels of Cu, Zn, and concentrations of As, V and Hg in fetuses, in particular, an analysis was performed on a fetus found inside a stranded individual, indicating placental transfer as the first route of exposure for some elements.

Innovative and practical tools for monitoring and assessing biodiversity status and impacts of multiple human pressures in marine systems

Human activities at sea can produce pressures and cumulative effects on ecosystem components that need to be monitored and assessed in a cost-effective manner. Five Horizon European projects have joined forces to collaboratively increase our knowledge and skills to monitor and assess the ocean in an innovative way, assisting managers and policy-makers in taking decisions to maintain sustainable activities at sea. Here, we present and discuss the status of some methods revised during a summer school, aiming at better management of coasts and seas. We include novel methods to monitor the coastal and ocean waters (e.g. environmental DNA, drones, imaging and artificial intelligence, climate modelling and spatial planning) and innovative tools to assess the status (e.g. cumulative impacts assessment, multiple pressures, Nested Environmental status Assessment Tool (NEAT), ecosystem services assessment or a new unifying approach). As a concluding remark, some of the most important challenges ahead are assessing the pros and cons of novel methods, comparing them with benchmark technologies and integrating these into long-standing time series for data continuity. This requires transition periods and careful planning, which can be covered through an intense collaboration of current and future European projects on marine biodiversity and ecosystem health.

Biomonitoring of human activities recovery following lockdown in a highly touristic Mediterranean Island using Mytilus galloprovincialis

Coastal waters face significant anthropogenic stress, particularly from tourism, exacerbating pollution, especially in areas like touristic islands. Ischia, the largest island in the Gulf of Naples and part of the Regno di Nettuno Marine Protected Area, suffers from pollution due to tourism and maritime traffic. During the initial SARS-CoV-2 lockdown from March to June 2020, Ischia was isolated, providing a unique opportunity to study pollutant release and its impact on coastal ecosystems. Adult Mytilus galloprovincialis mussels were transplanted to three sites on the island for active biomonitoring. Accumulation of chemicals in tissues and biomarkers related to metabolism, detoxification, and oxidative stress were measured. Results indicated that pollutants from daily activities entered the sea, affecting filter feeders. Translocated organisms showed modulated metabolic functions and biochemical changes, highlighting coastal vulnerability and calling for conservation efforts.

Long-term data reveal that grazer density mediates climatic stress in salt marshes

Understanding how climate and local stressors interact is paramount for predicting future ecosystem structure. The effects of multiple stressors are often examined in small-scale and short-term field experiments, limiting understanding of the spatial and temporal generality of the findings. Using a 22-year observational dataset of plant and grazer abundance in a southeastern US salt marsh, we analyzed how changes in drought and grazer density combined to affect plant biomass. We found: (1) increased drought severity and higher snail density both correlated with lower plant biomass; (2) drought and snail effects interacted additively; and, (3) snail effects had a threshold, with additive top-down effects only occurring when snails were present at high densities. These results suggest that the emergence of multiple stressor effects can be density dependent, and they validate short-term experimental evidence that consumers can augment environmental stress. These findings have important implications for predicting future ecosystem structure and managing natural ecosystems.

Spatial and life history variation in a trait-based species vulnerability and impact model

Anthropogenic pressures threaten biodiversity, necessitating conservation actions founded on robust ecological models. However, prevailing models inadequately capture the spatiotemporal variation in environmental pressures faced by species with high mobility or complex life histories, as data are often aggregated across species' life histories or spatial distributions. We highlight the limitations of static models for dynamic species and incorporate life history variation and spatial distributions for species and stressors into a trait-based vulnerability and impact model. We use green sea turtles in the Greater Caribbean Region to demonstrate how vulnerability and anthropogenic impact for a dynamic species change across four life stages. By incorporating life stages into a trait-based vulnerability model, we observed life stage-specific vulnerabilities that were otherwise unnoticed when using an aggregated trait value set. Early life stages were more vulnerable to some stressors, such as inorganic pollution or marine heat waves, and less vulnerable to others, such as bycatch. Incorporating spatial distributions of stressors and life stages revealed impacts differ for each life stage across spatial areas, emphasizing the importance of stage-specific conservation measures. Our approach showcases the importance of incorporating dynamic processes into ecological models and will enable better and more targeted conservation actions for species with complex life histories and high mobility.

Ocean carbon emission prediction and management measures based on artificial intelligence remote sensing estimation in the context of carbon neutrality

With rapid economic development, the gradual deterioration of the natural environment has posed unprecedented challenges to human social civilization. The marine economy, as an important part of economic development, is the breakthrough of economic transformation for many coastal countries. Additionally, green development and environmental impact assessment have become the focus of research in these countries. This study employs remote sensing technology, an efficient observational method, to significantly enhance the efficiency of ocean information observation. It investigates ocean carbon emissions within the framework of carbon neutrality. First, we identified the ships along the coastline based on marine remote sensing information through the YOLO (you only look once) framework. Second, we applied the LSTM (long short-term memory) method to combine the target identification results and the historical data of carbon emissions to complete the corresponding carbon emission data fitting. Finally, carbon emission data from the past three years in the offshore area of Dalian were used to make accurate predictions. The results suggested that the recognition rate of the proposed target detection method could reach 88%, and the LSTM method has shown the best performance in terms of absolute error for the subsequent short-term carbon emission prediction. This framework not only provides essential technical support for analyzing remote sensing information within the context of carbon neutrality but also introduces innovative insights for carbon emission prediction.

Vertical structure of reef fish assemblages and light penetration reveal new boundaries of mesophotic ecosystems in the subtropical Southwestern Atlantic

In the Southwest Atlantic, fisheries and in situ observations suggest that mesophotic reefs occur further south than has been reported in the literature, and a description of these subtropical regions is still lacking. We used Baited Remote Underwater stereo-Videos to explore unrevealed patterns in the vertical structure of fish assemblages on subtropical Atlantic reefs, contrasting shallow and mesophotic habitats. Our data on species turnover and light penetration reveal that in the subtropical Atlantic, the boundaries between shallow and mesophotic habitats occur at depths of 18 m, which is shallower than most previous studies have shown. Generalized additive mixed models identified different environmental and management factors as important predictor variables that explain distribution of fish assemblages' attributes. Besides adding new evidence about mesophotic limits, we described variations in the vertical structure of fish assemblages, providing important information for the description and conservation of mesophotic environments in subtropical regions.

Status, threats, and conservation considerations of selected marine habitats and organisms in the Arabian/Persian Gulf

Many studies indicated that marine habitats and organisms in the Arabian/Persian Gulf ('Gulf') are broadly deteriorating. However, this likely results from the generalization of a few declining habitats or organisms in some locations. Here, we conduct a review to evaluate the status of selected habitats (mangroves, seagrasses, and coral reefs) and organisms (exploited bony fish, sharks, rays, dolphins, whales, and dugongs) and identify major threats to them in each Gulf country (except Iraq and Oman). We show that out of 52 habitats and organisms in the six countries, the predominant status (63.5%) is "Data-deficient", followed by "Decline" (21.2%) and "Increase-stable" (15.4%). The major threats to these habitats and organisms are coastal development, desalination plants, climate change, and fishing. However, our findings differentiate that some of these threats are causing severe degradation (i.e., have "Observed" impacts) while other threats, such as desalination plants, have potential impacts that are derived from laboratory experiments or modelling work. Our results can be used to guide conservation efforts in the region.

Global biogeography of microbes driving ocean ecological status under climate change

Microbial communities play a crucial role in ocean ecology and global biogeochemical processes. However, understanding the intricate interactions among diversity, taxonomical composition, functional traits, and how these factors respond to climate change remains a significant challenge. Here, we propose seven distinct ecological statuses by systematically considering the diversity, structure, and biogeochemical potential of the ocean microbiome to delineate their biogeography. Anthropogenic climate change is expected to alter the ecological status of the surface ocean by influencing environmental conditions, particularly nutrient and oxygen contents. Our predictive model, which utilizes machine learning, indicates that the ecological status of approximately 32.44% of the surface ocean may undergo changes from the present to the end of this century, assuming no policy interventions. These changes mainly include poleward shifts in the main taxa, increases in photosynthetic carbon fixation and decreases in nutrient metabolism. However, this proportion can decrease significantly with effective control of greenhouse gas emissions. Our study underscores the urgent necessity for implementing policies to mitigate climate change, particularly from an ecological perspective.

A Pretty Kettle of Fish: A Review on the Current Challenges in Mediterranean Teleost Reproduction

The Mediterranean region is facing several environmental changes and pollution issues. Teleosts are particularly sensitive to these challenges due to their intricate reproductive biology and reliance on specific environmental cues for successful reproduction. Wild populations struggle with the triad of climate change, environmental contamination, and overfishing, which can deeply affect reproductive success and population dynamics. In farmed species, abiotic factors affecting reproduction are easier to control, whereas finding alternatives to conventional diets for farmed teleosts is crucial for enhancing broodstock health, reproductive success, and the sustainability of the aquaculture sector. Addressing these challenges involves ongoing research into formulating specialized diets, optimizing feeding strategies, and developing alternative and sustainable feed ingredients. To achieve a deeper comprehension of these challenges, studies employing model species have emerged as pivotal tools. These models offer advantages in understanding reproductive mechanisms due to their well-defined physiology, genetic tractability, and ease of manipulation. Yet, while providing invaluable insights, their applicability to diverse species remains constrained by inherent variations across taxa and oversimplification of complex environmental interactions, thus limiting the extrapolation of the scientific findings. Bridging these gaps necessitates multidisciplinary approaches, emphasizing conservation efforts for wild species and tailored nutritional strategies for aquaculture, thereby fostering sustainable teleost reproduction in the Mediterranean.

3D ocean assessments reveal that fisheries reach deep but marine protection remains shallow

The wave of new global conservation targets, the conclusion of the High Seas Treaty negotiations, and the expansion of extractive use into the deep sea call for a paradigm shift in ocean conservation. The current reductionist 2D representation of the ocean to set targets and measure impacts will fail at achieving effective biodiversity conservation. Here, we develop a framework that overlays depth realms onto marine ecoregions to conduct the first three-dimensional spatial analysis of global marine conservation achievements and fisheries footprint. Our novel approach reveals conservation gaps of mesophotic, rariphotic, and abyssal depths and an underrepresentation of high protection levels across all depths. In contrast, the 3D footprint of fisheries covers all depths, with benthic fishing occurring down to the lower bathyal and mesopelagic fishing peaking in areas overlying abyssal depths. Additionally, conservation efforts are biased towards areas where the lowest fishing pressures occur, compromising the effectiveness of the marine conservation network. These spatial mismatches emphasize the need to shift towards 3D thinking to achieve ocean sustainability.

Long term declines in the functional diversity of sharks in the coastal oceans of eastern Australia

Human impacts lead to widespread changes in the abundance, diversity and traits of shark assemblages, altering the functioning of coastal ecosystems. The functional consequences of shark declines are often poorly understood due to the absence of empirical data describing long-term change. We use data from the Queensland Shark Control Program in eastern Australia, which has deployed mesh nets and baited hooks across 80 beaches using standardised methodologies since 1962. We illustrate consistent declines in shark functional richness quantified using both ecological (e.g., feeding, habitat and movement) and morphological (e.g., size, morphology) traits, and this corresponds with declining ecological functioning. We demonstrate a community shift from targeted apex sharks to a greater functional richness of non-target species. Declines in apex shark functional richness and corresponding changes in non-target species may lead to an anthropogenically induced trophic cascade. We suggest that repairing diminished shark populations is crucial for the stability of coastal ecosystems.

The complete chloroplast genome sequence of Hydrocotyle vulgaris L. (Araliaceae)

Hydrocotyle vulgaris is a perennial wetland clonal plant in the Araliaceae family, which was introduced to China as an ornamental plant in the 1990s. Although H. vulgaris is now considered a potential invasiveness species in China, it also plays a significant role in the remediation of water pollution. Here, we reported its complete chloroplast genome and analyzed the basic characteristics. The chloroplast genome was 153,165 bp in length, including a pair of inverted repeat (IR) regions of 25,072 bp separated by a large single-copy (LSC) region of 84,291 bp and a small single-copy (SSC) region of 18,730 bp. The H. vulgaris chloroplast genome contained 132 predicted genes, and its overall GC content was 37.60%. Phylogenetic analysis revealed that H. vulgaris was closely related to H. verticillata. The H. vulgaris chloroplast genome presented in this study will lay a foundation for further genetic and genomic studies of the genus Hydrocotyle.

Changes in maerl-associated macroalgal community dynamics as evidence of anthropogenic pressure

BACKGROUND AND AIMS

Maerl-associated communities have received considerable attention due to their uniqueness, biodiversity and functional importance. Although the impacts of human activities are well documented for maerl-associated macrofauna, the spatio-temporal variations of macroalgae have comparatively been neglected, and the drivers that influence their dynamics are poorly known. We investigate the links between maerl-associated macroalgal communities, anthropogenic pressures and environmental conditions, and hypothesize that sites under human pressure would exhibit different dynamics when compared to reference sites.

METHODS

To better understand community variation through space and time, four subtidal maerl beds under different pressures were consistently monitored over one year in the bay of Brest, Brittany, France. Both macroalgae community monitoring and environmental data were acquired through field sampling and available models.

KEY RESULTS

Higher macroalgal biomass was observed within eutrophic sites, especially in summer (more than ten times higher than in the Unimpacted site), caused by free-living forms of opportunistic red macroalgae. The Dredged site also exhibited distinct macroalgal communities during summer from the Unimpacted site. Nutrient concentrations and seasonality proved to be key factors affecting the macroalgal community composition, although dredging and its effects on granulometry also had a strong influence. Over the long term, fewer than half of the species identified during historical surveys were found, indicating major temporal changes.

CONCLUSIONS

Human pressures have strong impacts on maerl-associated macroalgal communities. Nutrient concentrations and dredging pressure appear as the main anthropogenic factors shaping maerl-associated macroalgal communities. Additionally, our results suggest historical changes in maerl-associated macroalgal communities over 25 years in response to changes in local human pressure management. This study suggests that maerl-associated macroalgal communities could be used as indicators of anthropogenically driven changes in this habitat.

Planktonic eukaryotes in the Chesapeake Bay: contrasting responses of abundant and rare taxa to estuarine gradients

Phytoplankton are important drivers of aquatic ecosystem function and environmental health. Their community compositions and distributions are directly impacted by environmental processes and human activities, including in the largest estuary in North America, the Chesapeake Bay. It is crucial to uncover how planktonic eukaryotes play fundamental roles as primary producers and trophic links and sustain estuarine ecosystems. In this study, we investigated the detailed community structure and spatiotemporal variations of planktonic eukaryotes in the Chesapeake Bay across space and time for three consecutive years. A clear seasonal and spatial shift of total, abundant, and rare planktonic eukaryotes was evident, and the pattern recurred interannually. Multiple harmful algal species have been identified in the Bay with varied distribution patterns, such as Karlodinium, Heterosigma akashiwo, Protoperidinium sp., etc. Compared to abundant taxa, rare subcommunities were more sensitive to environmental disturbance in terms of richness, diversity, and distribution. The combined effects of temporal variation (13.3%), nutrient availability (10.0%), and spatial gradients (8.8%) structured the distribution of eukaryotic microbial communities in the Bay. Similar spatiotemporal patterns between planktonic prokaryotes and eukaryotes suggest common mechanisms of adjustment, replacement, and species interaction for planktonic microbiomes under strong estuarine gradients. To our best knowledge, this work represents the first systematic study on planktonic eukaryotes in the Bay. A comprehensive view of the distribution of planktonic microbiomes and their interactions with environmental processes is critical in understanding the underlying microbial mechanisms involved in maintaining the stability, function, and environmental health of estuarine ecosystems.

IMPORTANCE

Deep sequencing analysis of planktonic eukaryotes in the Chesapeake Bay reveals high community diversity with many newly recognized phytoplankton taxa. The Chesapeake Bay planktonic eukaryotes show distinct seasonal and spatial variability, with recurring annual patterns of total, abundant, and rare groups. Rare taxa mainly contribute to eukaryotic diversity compared to abundant groups, and they are more sensitive to spatiotemporal variations and environmental filtering. Temporal variations, nutrient availability, and spatial gradients significantly affect the distribution of eukaryotic microbial communities. Similar spatiotemporal patterns in prokaryotes and eukaryotes suggest common mechanisms of adjustment, substitution, and species interactions in planktonic microbiomes under strong estuarine gradients. Interannually recurring patterns demonstrate that diverse eukaryotic taxa have well adapted to the estuarine environment with a long residence time. Further investigations of how human activities impact estuarine planktonic eukaryotes are critical in understanding their essential ecosystem roles and in maintaining environmental safety and public health.

Resilience assessment in complex natural systems

Ecological resilience is the capability of an ecosystem to maintain the same structure and function and avoid crossing catastrophic tipping points (i.e. undergoing irreversible regime shifts). While fundamental for management, concrete ways to estimate and interpret resilience in real ecosystems are still lacking. Here, we develop an empirical approach to estimate resilience based on the stochastic cusp model derived from catastrophe theory. The cusp model models tipping points derived from a cusp bifurcation. We extend cusp in order to identify the presence of stable and unstable states in complex natural systems. Our Cusp Resilience Assessment (CUSPRA) has three characteristics: (i) it provides estimates on how likely a system is to cross a tipping point (in the form of a cusp bifurcation) characterized by hysteresis, (ii) it assesses resilience in relation to multiple external drivers and (iii) it produces straightforward results for ecosystem-based management. We validate our approach using simulated data and demonstrate its application using empirical time series of an Atlantic cod population and marine ecosystems in the North Sea and the Mediterranean Sea. We show that Cusp Resilience Assessment is a powerful method to empirically estimate resilience in support of a sustainable management of our constantly adapting ecosystems under global climate change.

Not so silent spectators: How spectator vessels at international sailing regattas alter marine soundscapes

International sailing regattas are major sporting events often held within coastal marine environments which overlap with the habitats of marine species. Although races are confined to courses, the popularity of these events can attract large spectator flotillas, sometimes composed of hundreds of motorized vessels. Underwater noise from these flotillas can potentially alter soundscapes experienced by marine species. To understand how these flotillas may alter soundscapes, acoustic recordings were taken around racecourses during the 36th America's Cup in the Hauraki Gulf, New Zealand in 2021. Sustained increases in broadband underwater sound levels during the regatta (up to 17 dB re 1 μPa rms; 0.01-24 kHz) that extended beyond racecourse boundaries (>8.5 km) and racing hours were observed; very likely attributable to the increase in regatta-related vessel activity. Underwater noise pollution from spectator flotillas attending larger regattas should be considered during event planning stages, particularly when events occur in ecologically significance areas.

Climate change effects on aquaculture production and its sustainable management through climate-resilient adaptation strategies: a review

Aquaculture witnessed a remarkable growth as one of the fastest-expanding sector in the food production industry; however, it faces serious threat from the unavoidable impacts of climate change. Understanding this threat, the present review explores the consequences of climate change on aquaculture production and provides need based strategies for its sustainable management, with a particular emphasis on climate-resilient approaches. The study examines the multi-dimensional impacts of climate change on aquaculture which includes the shifts in water temperature, sea-level rise, ocean acidification, harmful algal blooms, extreme weather events, and alterations in ecological dynamics. The review subsequently investigates innovative scientific interventions and climate-resilient aquaculture strategies aimed at strengthening the adaptive capacity of aquaculture practices. Some widely established solutions include selective breeding, species diversification, incorporation of ecosystem-based management practices, and the implementation of sustainable and advanced aquaculture systems (aquaponics and recirculating aquaculture systems (RAS). These strategies work towards fortifying aquaculture systems against climate-induced disturbances, thereby mitigating risks and ensuring sustained production. This review provides a detailed insight to the ongoing discourse on climate-resilient aquaculture, emphasizing an immediate need for prudent measures to secure the future sustainability of fish food production sector.

Divergent perspectives on the synergistic impacts of thermal-chemical stress on aquatic biota within the framework of climate change scenarios

Climate change, including global warming, leads to rising temperatures in aquatic ecosystems, which is one of the numerous repercussions it brings. Furthermore, water warming can indirectly impact aquatic organisms by modifying the toxicity levels of pollutants. Nevertheless, numerous studies have explored the potential impacts of chemical stress on aquatic biota, but little is known about how such chemicals and toxins interact with climate change factors, especially elevated temperatures. As such, this review paper focuses on exploring the potential effects of thermochemical stress on a wide sector of aquatic organisms, including aquatic vertebrates and invertebrates, in various aquatic ecosystems (freshwater and marine systems). Herein, the objective of this study is to explore the most up-to-date the impact of water warming (without chemical stress) and thermochemical stress on various biochemical and physiological processes in aquatic fauna and how this greatly affects biodiversity and sustainability. Therefore, there is a growing need to understand and evaluate this synergistic mechanism and its potential hazardous impacts. However, we need further investigations and scientific reports to address this serious environmental issue in order to confront anthropogenic pollutants regarding climate change and chemical pollution risks in the near future and subsequently find sustainable solutions for them.

Impacts of Desalination Brine Discharge on Benthic Ecosystems

Seawater reverse osmosis (SWRO) desalination facilities produce freshwater and, at the same time, discharge hypersaline brine that often includes various chemical additives such as antiscalants and coagulants. This dense brine can sink to the sea bottom and creep over the seabed, reaching up to 5 km from the discharge point. Previous reviews have discussed the effects of SWRO desalination brine on various marine ecosystems, yet little attention has been paid to the impacts on benthic habitats. This review comprehensibly discusses the effects of SWRO brine discharge on marine benthic fauna and flora. We review previous studies that indicated a suite of impacts by SWRO brine on benthic organisms, including bacteria, seagrasses, polychaetes, and corals. The effects within the discharge mixing zones range from impaired activities and morphological deformations to changes in the community composition. Recent modeling work demonstrated that brine could spread over the seabed, beyond the mixing zone, for up to several tens of kilometers and impair nutrient fluxes from the sediment to the water column. We also provide a possible perspective on brine's impact on the biogeochemical process within the mixing zone subsurface. Desalination brine can infiltrate into the sandy bottom around the discharge area due to gravity currents. Accumulation of brine and associated chemical additives, such as polyphosphonate-based antiscalants and ferric-based coagulants in the porewater, may change the redox zones and, hence, impact biogeochemical processes in sediments. With the demand for drinking water escalating worldwide, the volumes of brine discharge are predicted to triple during the current century. Future efforts should focus on the development and operation of viable technologies to minimize the volumes of brine discharged into marine environments, along with a change to environmentally friendly additives. However, the application of these technologies should be partly subsidized by governmental stakeholders to safeguard coastal ecosystems around desalination facilities.

Life goes on: Spatial heterogeneity promotes biodiversity in an urbanized coastal marine ecosystem

Both human populations and marine biodiversity are concentrated along coastlines, with growing conservation interest in how these ecosystems can survive intense anthropogenic impacts. Tropical urban centres provide valuable research opportunities because these megacities are often adjacent to mega-diverse coral reef systems. The Pearl River Delta is a prime exemplar, as it encompasses one of the most densely populated and impacted regions in the world and is located just northwest of the Coral Triangle. However, the spatial and taxonomic complexity of this biodiversity, most of which is small, cryptic in habitat and poorly known, make comparative analyses challenging. We deployed standardized settlement structures at seven sites differing in the intensity of human impacts and used COI metabarcoding to characterize benthic biodiversity, with a focus on metazoans. We found a total of 7184 OTUs, with an average of 665 OTUs per sampling unit; these numbers exceed those observed in many previous studies using comparable methods, despite the location of our study in an urbanized environment. Beta diversity was also high, with 52% of the OTUs found at just one site. As expected, we found that the sites close to point sources of pollution had substantially lower diversity (44% less) relative to sites bathed in less polluted oceanic waters. However, the polluted sites contributed substantially to the total animal diversity of the region, with 25% of all OTUs occurring only within polluted sites. Further analysis of Arthropoda, Annelida and Mollusca showed that phylogenetic clustering within a site was common, suggesting that environmental filtering reduced biodiversity to a subset of lineages present within the region, a pattern that was most pronounced in polluted sites and for the Arthropoda. The water quality gradients surrounding the PRD highlight the unique role of in situ studies for understanding the impacts of complex urbanization pressures on biodiversity.

Environmental drivers of global variation in home range size of terrestrial and marine mammals

As animal home range size (HRS) provides valuable information for species conservation, it is important to understand the driving factors of HRS variation. It is widely known that differences in species traits (e.g. body mass) are major contributors to variation in mammal HRS. However, most studies examining how environmental variation explains mammal HRS variation have been limited to a few species, or only included a single (mean) HRS estimate for the majority of species, neglecting intraspecific HRS variation. Additionally, most studies examining environmental drivers of HRS variation included only terrestrial species, neglecting marine species. Using a novel dataset of 2800 HRS estimates from 586 terrestrial and 27 marine mammal species, we quantified the relationships between HRS and environmental variables, accounting for species traits. Our results indicate that terrestrial mammal HRS was on average 5.3 times larger in areas with low human disturbance (human footprint index [HFI] = 0), compared to areas with maximum human disturbance (HFI = 50). Similarly, HRS was on average 5.4 times larger in areas with low annual mean productivity (NDVI = 0), compared to areas with high productivity (NDVI = 1). In addition, HRS increased by a factor of 1.9 on average from low to high seasonality in productivity (standard deviation (SD) of monthly NDVI from 0 to 0.36). Of these environmental variables, human disturbance and annual mean productivity explained a larger proportion of HRS variance than seasonality in productivity. Marine mammal HRS decreased, on average, by a factor of 3.7 per 10°C decline in annual mean sea surface temperature (SST), and increased by a factor of 1.5 per 1°C increase in SST seasonality (SD of monthly values). Annual mean SST explained more variance in HRS than SST seasonality. Due to the small sample size, caution should be taken when interpreting the marine mammal results. Our results indicate that environmental variation is relevant for HRS and that future environmental changes might alter the HRS of individuals, with potential consequences for ecosystem functioning and the effectiveness of conservation actions.

Early signals of Posidonia oceanica meadows recovery in a context of wastewater treatment improvements

Natural ecological restoration is a cornerstone of modern conservation science and managers need more documented "success stories" to lead the way. In French mediterranean sea, we monitored Posidonia oceanica lower limit using acoustic telemetry and photogrammetry and investigated the descriptors driving its variations, at a national scale and over more than a decade. We showed significant effects of environmental descriptors (region, sea surface temperature and bottom temperature) but also of wastewater treatment plant (WWTP) effluents proxies (size of WWTP, time since conformity, and distance to the closest effluent) on the meadows lower limit progression. This work indicates a possible positive response of P. oceanica meadows to improvements in wastewater treatment and a negative effect of high temperatures. While more data is needed, the example of French wastewater policy should inspire stakeholders and coastal managers in their efforts to limit anthropogenic pressures on vulnerable ecosystems.

Ecological baselines in the Eastern Mediterranean Sea shifted long before the availability of observational time series

Native biodiversity loss and invasions by nonindigenous species (NIS) have massively altered ecosystems worldwide, but trajectories of taxonomic and functional reorganization remain poorly understood due to the scarcity of long-term data. Where ecological time series are available, their temporal coverage is often shorter than the history of anthropogenic changes, posing the risk of drawing misleading conclusions on systems' current states and future development. Focusing on the Eastern Mediterranean Sea, a region affected by massive biological invasions and the largest climate change-driven collapse of native marine biodiversity ever documented, we followed the taxonomic and functional evolution of an emerging "novel ecosystem", using a unique dataset on shelled mollusks sampled in 2005-2022 on the Israeli shelf. To quantify the alteration of observed assemblages relative to historical times, we also analyzed decades- to centuries-old ecological baselines reconstructed from radiometrically dated death assemblages, time-averaged accumulations of shells on the seafloor that constitute natural archives of past community states. Against expectations, we found no major loss of native biodiversity in the past two decades, suggesting that its collapse had occurred even earlier than 2005. Instead, assemblage taxonomic and functional richness increased, reflecting the diversification of NIS whose trait structure was, and has remained, different from the native one. The comparison with the death assemblage, however, revealed that modern assemblages are taxonomically and functionally much impoverished compared to historical communities. This implies that NIS did not compensate for the functional loss of native taxa, and that even the most complete observational dataset available for the region represents a shifted baseline that does not reflect the actual magnitude of anthropogenic changes. While highlighting the great value of observational time series, our results call for the integration of multiple information sources on past ecosystem states to better understand patterns of biodiversity loss in the Anthropocene.

Navigating the unknown: assessing anthropogenic threats to beaked whales, family Ziphiidae

This review comprehensively evaluates the impacts of anthropogenic threats on beaked whales (Ziphiidae)-a taxonomic group characterized by cryptic biology, deep dives and remote offshore habitat, which have challenged direct scientific observation. By synthesizing information published in peer-reviewed studies and grey literature, we identified available evidence of impacts across 14 threats for each Ziphiidae species. Threats were assessed based on their pathways of effects on individuals, revealing many gaps in scientific understanding of the risks faced by beaked whales. By applying a comprehensive taxon-level analysis, we found evidence that all beaked whale species are affected by multiple stressors, with climate change, entanglement and plastic pollution being the most common threats documented across beaked whale species. Threats assessed as having a serious impact on individuals included whaling, military sonar, entanglement, depredation, vessel strikes, plastics and oil spills. This review emphasizes the urgent need for targeted research to address a range of uncertainties, including cumulative and population-level impacts. Understanding the evidence and pathways of the effects of stressors on individuals can support future assessments, guide practical mitigation strategies and advance current understanding of anthropogenic impacts on rare and elusive marine species.

A data-driven approach to multiple-stressor impact assessment for a marine protected area

The coastal environment is not managed in a way that considers the impact of cumulative threats, despite being subject to threats from all realms (marine, land, and atmosphere). Relationships between threats and species are often nonlinear; thus, current (linear) approaches to estimating the impact of threats may be misleading. We developed a data-driven approach to assessing cumulative impacts on ecosystems and applied it to explore nonlinear relationships between threats and a temperate reef fish community. We used data on water quality, commercial fishing, climate change, and indicators of recreational fishing and urbanization to build a cumulative threat map of the northern region in New South Wales, Australia. We used statistical models of fish abundance to quantify associations among threats and biophysical covariates and predicted where cumulative impacts are likely to have the greatest impact on fish. We also assessed the performance of no-take zones (NTZs), to protect fish from cumulative threats across 2 marine protected area networks (marine parks). Fishing had a greater impact on fish than water quality threats (i.e., percent increase above the mean for invertivores was 337% when fishing was removed and was 11% above the mean when water quality was removed inside NTZs), and fishing outside NTZs affected fish abundances inside NTZs. Quantifying the spatial influence of multiple threats enables managers to understand the multitude of management actions required to address threats.

Addressing the global challenge of coastal sewage pollution

Coastal environments, essential for about half of the world's population living near coastlines, face severe threats from human-induced activities such as intensified urbanization, aggressive development, and particularly, coastal sewage pollution. This type of pollution, comprising untreated sewage discharging nutrients, pathogens, heavy metals, microplastics, and organic compounds, significantly endangers these ecosystems. The issue of sewage in coastal areas is complex, influenced by factors like inadequate sewage systems, septic tanks, industrial and agricultural runoff, and natural processes like coastal erosion, further complicated by oceanic dynamics like tides and currents. A global statistic reveals that over 80 % of sewage enters the environment without treatment, contributing significantly to nitrogen pollution in coastal ecosystems. This pollution not only harms marine life and ecosystems through chemical contaminants and eutrophication, leading to hypoxic zones and biodiversity loss, but also affects human health through waterborne diseases and seafood contamination. Additionally, it has substantial economic repercussions, impacting tourism, recreation, and fisheries, and causing revenue and employment losses. Addressing this issue globally involves international agreements and national legislations, but their effectiveness is hindered by infrastructural disparities, particularly in developing countries. Thus, effective management requires a comprehensive approach including advanced treatment technologies, stringent regulations, regular monitoring, and international cooperation. The international scientific community plays a crucial role in fostering a collaborative and equitable response to this pressing environmental challenge.

Environmental DNA metabarcoding reveals the effects of seafloor litter and trawling on marine biodiversity

Environmental DNA (eDNA) techniques are emerging as promising tools for monitoring marine communities. However, they have not been applied to study the integrated effects of anthropogenic pressures on marine biodiversity. This study examined the relationships between demersal community species composition, key environmental features, and anthropogenic impacts such as fishing effort and seafloor litter using eDNA data in the central Tyrrhenian Sea. The results indicated that both fishing effort and seafloor litter influenced species composition and diversity. The adaptive traits of marine species played a critical role in their response to debris accumulation and fishing. Mobile species appeared to use relocation strategies, while sessile species showed flexibility in the face of disturbance. Epibiotic species relied on passive transport. The use of eDNA-based methods is a valuable resource for monitoring anthropogenic impacts during scientific surveys, enhancing our ability to monitor marine ecosystems and more effectively assess the effects of pollution.

Assessing combined effects of long-term exposure to copper and marine heatwaves on the reef-forming serpulid Ficopomatus enigmaticus through a biomarker approach

Sessile benthic organisms can be affected by global changes and local pressures, such as metal pollution, that can lead to damages at different levels of biological organization. Effects of exposure to marine heatwaves (MHWs) alone and in combination with environmentally relevant concentration of copper (Cu) were evaluated in the reef-forming tubeworm Ficopomatus enigmaticus using a multi-biomarker approach. Biomarkers of cell membrane damage, enzymatic antioxidant defences, metabolic activity, neurotoxicity, and DNA integrity were analyzed. The exposure to Cu alone did not produce any significant effect. Exposure to MHWs alone produced effects only on metabolic activity (increase of glutathione S-transferase) and energy reserves (decrease in protein content). MHWs in combination with copper was the condition that most influenced the status of cell homeostasis of exposed F. enigmaticus. The combination of MHWs plus Cu exposure induced increase of protein carbonylation and glutathione S-transferase activity, decrease in protein/carbohydrate content and carboxylesterase activity. This study on a reef-forming organism highlighted the additive effect of a climate change-related stressor to metals pollution of marine and brackish waters.