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Pérez-Moncada UA, Santander C, Ruiz A, Vidal C, Santos C, Cornejo P. Design of Microbial Consortia Based on Arbuscular Mycorrhizal Fungi, Yeasts, and Bacteria to Improve the Biochemical, Nutritional, and Physiological Status of Strawberry Plants Growing under Water Deficits. PLANTS (BASEL, SWITZERLAND) 2024; 13:1556. [PMID: 38891364 PMCID: PMC11175115 DOI: 10.3390/plants13111556] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2024] [Revised: 05/23/2024] [Accepted: 06/01/2024] [Indexed: 06/21/2024]
Abstract
Drought affects several plant physiological characteristics such as photosynthesis, carbon metabolism, and chlorophyll content, causing hormonal and nutritional imbalances and reducing nutrient uptake and transport, which inhibit growth and development. The use of bioinoculants based on plant growth-promoting microorganisms such as plant growth-promoting rhizobacteria (PGPR), yeasts, and arbuscular mycorrhizal fungi (AMF) has been proposed as an alternative to help plants tolerate drought. However, most studies have been based on the use of a single type of microorganism, while consortia studies have been scarcely performed. Therefore, the aim of this study was to evaluate different combinations of three PGPR, three AMF, and three yeasts with plant growth-promoting attributes to improve the biochemical, nutritional, and physiological behavior of strawberry plants growing under severe drought. The results showed that the growth and physiological attributes of the non-inoculated plants were significantly reduced by drought. In contrast, plants inoculated with the association of the fungus Claroideoglomus claroideum, the yeast Naganishia albida, and the rhizobacterium Burkholderia caledonica showed a stronger improvement in tolerance to drought. High biomass, relative water content, fruit number, photosynthetic rate, transpiration, stomatal conductance, quantum yield of photosystem II, N concentration, P concentration, K concentration, antioxidant activities, and chlorophyll contents were significantly improved in inoculated plants by up to 16.6%, 12.4%, 81.2%, 80%, 79.4%, 71.0%, 17.8%, 8.3%, 6.6%, 57.3%, 41%, and 22.5%, respectively, compared to stressed non-inoculated plants. Moreover, decreased malondialdehyde levels by up to 32% were registered. Our results demonstrate the feasibility of maximizing the effects of inoculation with beneficial rhizosphere microorganisms based on the prospect of more efficient combinations among different microbial groups, which is of interest to develop bioinoculants oriented to increase the growth of specific plant species in a global scenario of increasing drought stress.
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Affiliation(s)
- Urley A. Pérez-Moncada
- Doctorado en Ciencias de Recursos Naturales, Universidad de La Frontera, P.O. Box 54-D, Temuco 4811230, Chile;
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, P.O. Box 54-D, Temuco 4780000, Chile; (C.S.); (A.R.); (C.V.)
| | - Christian Santander
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, P.O. Box 54-D, Temuco 4780000, Chile; (C.S.); (A.R.); (C.V.)
- Grupo de Ingeniería Ambiental y Biotecnología, Facultad de Ciencias Ambientales y Centro EULA-Chile, Universidad de Concepción, Concepción 4070411, Chile
| | - Antonieta Ruiz
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, P.O. Box 54-D, Temuco 4780000, Chile; (C.S.); (A.R.); (C.V.)
| | - Catalina Vidal
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, P.O. Box 54-D, Temuco 4780000, Chile; (C.S.); (A.R.); (C.V.)
| | - Cledir Santos
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, P.O. Box 54-D, Temuco 4780000, Chile; (C.S.); (A.R.); (C.V.)
- Centro Regional de Investigación e Innovación para la Sostenibilidad de la Agricultura y los Territorios Rurales, CERES, La Palma, Quillota 2260000, Chile
| | - Pablo Cornejo
- Centro Regional de Investigación e Innovación para la Sostenibilidad de la Agricultura y los Territorios Rurales, CERES, La Palma, Quillota 2260000, Chile
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, Quillota 2260000, Chile
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da Silva RC, Oliveira HC, Igamberdiev AU, Stasolla C, Gaspar M. Interplay between nitric oxide and inorganic nitrogen sources in root development and abiotic stress responses. JOURNAL OF PLANT PHYSIOLOGY 2024; 297:154241. [PMID: 38640547 DOI: 10.1016/j.jplph.2024.154241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 03/14/2024] [Accepted: 03/26/2024] [Indexed: 04/21/2024]
Abstract
Nitrogen (N) is an essential nutrient for plants, and the sources from which it is obtained can differently affect their entire development as well as stress responses. Distinct inorganic N sources (nitrate and ammonium) can lead to fluctuations in the nitric oxide (NO) levels and thus interfere with nitric oxide (NO)-mediated responses. These could lead to changes in reactive oxygen species (ROS) homeostasis, hormone synthesis and signaling, and post-translational modifications of key proteins. As the consensus suggests that NO is primarily synthesized in the reductive pathways involving nitrate and nitrite reduction, it is expected that plants grown in a nitrate-enriched environment will produce more NO than those exposed to ammonium. Although the interplay between NO and different N sources in plants has been investigated, there are still many unanswered questions that require further elucidation. By building on previous knowledge regarding NO and N nutrition, this review expands the field by examining in more detail how NO responses are influenced by different N sources, focusing mainly on root development and abiotic stress responses.
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Affiliation(s)
- Rafael Caetano da Silva
- Department of Biodiversity Conservation, Institute of Environmental Research, São Paulo, SP, 04301-902, Brazil
| | - Halley Caixeta Oliveira
- Department of Animal and Plant Biology, State University of Londrina, Londrina, PR, 86057-970, Brazil
| | - Abir U Igamberdiev
- Department of Biology, Memorial University of Newfoundland, St. John's, NL, A1C 5S7, Canada
| | - Claudio Stasolla
- Department of Plant Science, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
| | - Marilia Gaspar
- Department of Biodiversity Conservation, Institute of Environmental Research, São Paulo, SP, 04301-902, Brazil.
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Ramirez-Builes VH, Küsters J, Thiele E, Lopez-Ruiz JC. Physiological and Agronomical Response of Coffee to Different Nitrogen Forms with and without Water Stress. PLANTS (BASEL, SWITZERLAND) 2024; 13:1387. [PMID: 38794457 PMCID: PMC11125271 DOI: 10.3390/plants13101387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Revised: 04/10/2024] [Accepted: 04/11/2024] [Indexed: 05/26/2024]
Abstract
Nitrogen (N) is the most important nutrient in coffee, with a direct impact on productivity, quality, and sustainability. N uptake by the roots is dominated by ammonium (NH4+) and nitrates (NO3-), along with some organic forms at a lower proportion. From the perspective of mineral fertilizer, the most common N sources are urea, ammonium (AM), ammonium nitrates (AN), and nitrates; an appropriate understanding of the right balance between N forms in coffee nutrition would contribute to more sustainable coffee production through the better N management of this important crop. The aim of this research was to evaluate the influences of different NH4-N/NO3-N ratios in coffee from a physiological and agronomical perspective, and their interaction with soil water levels. Over a period of 5 years, three trials were conducted under controlled conditions in a greenhouse with different growing media (quartz sand) and organic soil, with and without water stress, while one trial was conducted under field conditions. N forms and water levels directly influence physiological responses in coffee, including photosynthesis (Ps), chlorophyll content, dry biomass accumulation (DW), nutrient uptake, and productivity. In all of the trials, the plants group in soils with N ratios of 50% NH4-N/50% NO3-N, and 25% NH4-N/75% NO3-N showed better responses to water stress, as well as a higher Ps, a higher chlorophyll content, a higher N and cation uptake, higher DW accumulation, and higher productivity. The soil pH was significantly influenced by the N forms: the higher the NO3--N share, the lower the acidification level. The results allow us to conclude that the combination of 50% NH4-N/50% NO3-N and 25% NH4-N/75% NO3-N N forms in coffee improves the resistance capacity of the coffee to water stress, improves productivity, reduces the soil acidification level, and improves ion balance and nutrient uptake.
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Affiliation(s)
- Victor Hugo Ramirez-Builes
- Center for Plant Nutrition and Environmental Research Hanninghof, Yara International, 48249 Dülmen, Germany
| | - Jürgen Küsters
- Center for Plant Nutrition and Environmental Research Hanninghof, Yara International, 48249 Dülmen, Germany
| | - Ellen Thiele
- Center for Plant Nutrition and Environmental Research Hanninghof, Yara International, 48249 Dülmen, Germany
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Koua AP, Siddiqui MN, Heß K, Klag N, Kambona CM, Duarte-Delgado D, Oyiga BC, Léon J, Ballvora A. Genome-wide dissection and haplotype analysis identified candidate loci for nitrogen use efficiency under drought conditions in winter wheat. THE PLANT GENOME 2024; 17:e20394. [PMID: 37880495 DOI: 10.1002/tpg2.20394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 09/07/2023] [Accepted: 09/11/2023] [Indexed: 10/27/2023]
Abstract
Climate change causes extreme conditions like prolonged drought, which results in yield reductions due to its effects on nutrient balances such as nitrogen uptake and utilization by plants. Nitrogen (N) is a crucial nutrient element for plant growth and productivity. Understanding the mechanistic basis of nitrogen use efficiency (NUE) under drought conditions is essential to improve wheat (Triticum aestivum L.) yield. Here, we evaluated the genetic variation of NUE-related traits and photosynthesis response in a diversity panel of 200 wheat genotypes under drought and nitrogen stress conditions to uncover the inherent genetic variation and identify quantitative trait loci (QTLs) underlying these traits. The results revealed significant genetic variations among the genotypes in response to drought stress and nitrogen deprivation. Drought impacted plant performance more than N deprivation due to its effect on water and nutrient uptake. GWAS identified a total of 27 QTLs with a significant main effect on the drought-related traits, while 10 QTLs were strongly associated with the NUE traits. Haplotype analysis revealed two different haplotype blocks within the associated region on chromosomes 1B and 5A. The two haplotypes showed contrasting effects on N uptake and use efficiency traits. The in silico and transcript analyses implicated candidate gene coding for cold shock protein. This gene was the most highly expressed gene under several stress conditions, including drought stress. Upon validation, these QTLs on 1B and 5A could be used as a diagnostic marker for NUE and drought tolerance screening in wheat.
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Affiliation(s)
- Ahossi Patrice Koua
- INRES Pflanzenzüchtung, Rheinische Friedrich-Wilhelms-University, Bonn, Germany
| | - Md Nurealam Siddiqui
- INRES Pflanzenzüchtung, Rheinische Friedrich-Wilhelms-University, Bonn, Germany
- Department of Biochemistry and Molecular Biology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, Bangladesh
| | - Katrin Heß
- INRES Pflanzenzüchtung, Rheinische Friedrich-Wilhelms-University, Bonn, Germany
| | - Nikko Klag
- INRES Pflanzenzüchtung, Rheinische Friedrich-Wilhelms-University, Bonn, Germany
| | | | | | | | - Jens Léon
- INRES Pflanzenzüchtung, Rheinische Friedrich-Wilhelms-University, Bonn, Germany
- Field Lab Campus Klein-Altendorf, University of Bonn, Rheinbach, Germany
| | - Agim Ballvora
- INRES Pflanzenzüchtung, Rheinische Friedrich-Wilhelms-University, Bonn, Germany
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He Y, Zhang R, Li P, Men L, Xu M, Wang J, Niu S, Tian D. Nitrogen enrichment delays the drought threshold responses of leaf photosynthesis in alpine grassland plants. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 913:169560. [PMID: 38154633 DOI: 10.1016/j.scitotenv.2023.169560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Revised: 12/05/2023] [Accepted: 12/19/2023] [Indexed: 12/30/2023]
Abstract
Extreme drought is found to cause a threshold response in photosynthesis in ecosystem level. However, the mechanisms behind this phenomenon are not well understood, highlighting the importance of revealing the drought thresholds for multiple leaf-level photosynthetic processes. Thus, we conducted a long-term experiment involving precipitation reduction and nitrogen (N) addition. Moreover, an extreme drought event occurred within the experimental period. We found the presence of drought thresholds for multiple leaf-level photosynthetic processes, with the leaf light-saturated carbon assimilation rate (Asat) displaying the highest threshold (10.76 v/v%) and the maximum rate of carboxylation by Rubisco (Vcmax) showing the lowest threshold (5.38 v/v%). Beyond the drought thresholds, the sensitivities of leaf-level photosynthetic processes to soil water content could be greater. Moreover, N addition lowered the drought thresholds of Asat and stomatal conductance (gs), but had no effect on that of Vcmax. Among species, plants with higher leaf K concentration traits had a lower drought threshold of Asat. Overall, this study highlights that leaf photosynthesis may be suppressed abruptly as soil water content surpasses the drought threshold. However, N enrichment helps to improve the resistance via delaying drought threshold response. These new findings have important implications for understanding the nonlinearity of ecosystem productivity response and early warning management in the scenario of combined extreme drought events and continuous N deposition.
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Affiliation(s)
- Yicheng He
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; College of Grassland Science and Technology, China Agricultural University, Beijing 100193, China
| | - Ruiyang Zhang
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China
| | - Pengyu Li
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; School of Grassland Science, Beijing Forestry University, Beijing 100083, China
| | - Lu Men
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; Institute of Qinghai-Tibetan Plateau, Southwest Minzu University, Chengdu 610041, China
| | - Meng Xu
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China
| | - Jinsong Wang
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China
| | - Shuli Niu
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Dashuan Tian
- Key Laboratory of Ecosystem Network Observation and Modeling, Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China.
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Vukasovic S, Eckert AH, Moritz AL, Borsch C, Rudloff S, Snowdon RJ, Stahl A. Effect of a QTL on wheat chromosome 5B associated with enhanced root dry mass on transpiration and nitrogen uptake under contrasting drought scenarios in wheat. BMC PLANT BIOLOGY 2024; 24:83. [PMID: 38308236 PMCID: PMC10835935 DOI: 10.1186/s12870-024-04756-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Accepted: 01/19/2024] [Indexed: 02/04/2024]
Abstract
BACKGROUND A sufficient nitrogen supply is crucial for high-quality wheat yields. However, the use of nitrogen fertilization can also negatively influence ecosystems due to leaching or volatile atmospheric emissions. Drought events, increasingly prevalent in many crop production areas, significantly impact nitrogen uptake. Breeding more efficient wheat varieties is necessary to achieve acceptable yields with limited nitrogen and water. Crop root systems play a crucial role as the primary organ for absorbing water and nutrients. To investigate the impact of an enhanced root system on nitrogen and water use efficiency in wheat under various irrigation conditions, this study conducted two experiments using precision phenotyping platforms for controlled drought stress treatment. Experiment 1 involved four contrasting winter wheat genotypes. It included the Chinese variety Ning0604, carrying a quantitative trait locus (QTL) on chromosome 5B associated with a higher root dry biomass, and three elite German varieties, Elixer, Genius, and Leandrus. Experiment 2 compared near-isogenic lines (NIL) of the three elite varieties, each containing introgressions of the QTL on chromosome 5B linked to root dry mass. In both experiments, nitrogen partitioning was tracked via isotope discrimination after fertilization with 5 Atom % 15N-labeled KNO3-. RESULTS In experiment 1 the quantification by 15N isotope discrimination revealed significantly (p < 0.05) higher nitrogen derived from fertilizer in the root organ for Ning0604 than those of the three German varieties. In experiment 2, two out of three NILs showed a significantly (p < 0.05) higher uptake of N derived from fertilizer than their respective recipient line under well-watered conditions. Furthermore, significantly lower transpiration rates (p < 0.1) were observed in one NIL compared to its respective recipient. CONCLUSIONS The combination of the DroughtSpotter facility coupled with 15N tracer-based tracking of N uptake and remobilization extends the insight into the impact of genetically altered root biomass on wheat NUE and WUE under different water availability scenarios. The study shows the potential for how a modified genetic constitution of the locus on wheat chromosome 5B can reduce transpiration and enhance N uptake. The dependence of the observations on the recipient and water availability suggests a need for further research to investigate the interaction with genetic background traits.
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Affiliation(s)
- Stjepan Vukasovic
- Department of Plant Breeding, IFZ Research Centre for Biosystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany.
| | - Andreas H Eckert
- Department of Plant Breeding, IFZ Research Centre for Biosystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany
| | - Anna L Moritz
- Department of Plant Breeding, IFZ Research Centre for Biosystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany
| | - Christian Borsch
- Analytical Platform Stable Isotopes and Cell Biology, Institute of Nutritional Sciences, Justus Liebig University, Giessen, Germany
| | - Silvia Rudloff
- Analytical Platform Stable Isotopes and Cell Biology, Institute of Nutritional Sciences, Justus Liebig University, Giessen, Germany
| | - Rod J Snowdon
- Department of Plant Breeding, IFZ Research Centre for Biosystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany
| | - Andreas Stahl
- Department of Plant Breeding, IFZ Research Centre for Biosystems, Land Use and Nutrition, Justus Liebig University, Giessen, Germany
- Institute for Resistance Research and Stress Tolerance, Julius Kühn Institute (JKI) - Federal Research Center for Cultivated Plants, Quedlinburg, Germany
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Santander C, González F, Pérez U, Ruiz A, Aroca R, Santos C, Cornejo P, Vidal G. Enhancing Water Status and Nutrient Uptake in Drought-Stressed Lettuce Plants ( Lactuca sativa L.) via Inoculation with Different Bacillus spp. Isolated from the Atacama Desert. PLANTS (BASEL, SWITZERLAND) 2024; 13:158. [PMID: 38256712 PMCID: PMC10818642 DOI: 10.3390/plants13020158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Revised: 12/26/2023] [Accepted: 01/04/2024] [Indexed: 01/24/2024]
Abstract
Drought is a major challenge for agriculture worldwide, being one of the main causes of losses in plant production. Various studies reported that some soil's bacteria can improve plant tolerance to environmental stresses by the enhancement of water and nutrient uptake by plants. The Atacama Desert in Chile, the driest place on earth, harbors a largely unexplored microbial richness. This study aimed to evaluate the ability of various Bacillus sp. from the hyper arid Atacama Desert in the improvement in tolerance to drought stress in lettuce (Lactuca sativa L. var. capitata, cv. "Super Milanesa") plants. Seven strains of Bacillus spp. were isolated from the rhizosphere of the Chilean endemic plants Metharme lanata and Nolana jaffuelii, and then identified using the 16s rRNA gene. Indole acetic acid (IAA) production, phosphate solubilization, nitrogen fixation, and 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity were assessed. Lettuce plants were inoculated with Bacillus spp. strains and subjected to two different irrigation conditions (95% and 45% of field capacity) and their biomass, net photosynthesis, relative water content, photosynthetic pigments, nitrogen and phosphorus uptake, oxidative damage, proline production, and phenolic compounds were evaluated. The results indicated that plants inoculated with B. atrophaeus, B. ginsengihumi, and B. tequilensis demonstrated the highest growth under drought conditions compared to non-inoculated plants. Treatments increased biomass production and were strongly associated with enhanced N-uptake, water status, chlorophyll content, and photosynthetic activity. Our results show that specific Bacillus species from the Atacama Desert enhance drought stress tolerance in lettuce plants by promoting several beneficial plant traits that facilitate water absorption and nutrient uptake, which support the use of this unexplored and unexploited natural resource as potent bioinoculants to improve plant production under increasing drought conditions.
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Affiliation(s)
- Christian Santander
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco 4811230, Chile; (C.S.); (F.G.); (U.P.); (A.R.); (C.S.)
- Grupo de Ingeniería Ambiental y Biotecnología, Facultad de Ciencias Ambientales y Centro EULA-Chile, Universidad de Concepción, Concepción 4070411, Chile
| | - Felipe González
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco 4811230, Chile; (C.S.); (F.G.); (U.P.); (A.R.); (C.S.)
- Programa de Doctorado en Ciencias Mención Biología Celular y Molecular Aplicada, Universidad de La Frontera, Temuco 4811230, Chile
| | - Urley Pérez
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco 4811230, Chile; (C.S.); (F.G.); (U.P.); (A.R.); (C.S.)
| | - Antonieta Ruiz
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco 4811230, Chile; (C.S.); (F.G.); (U.P.); (A.R.); (C.S.)
| | - Ricardo Aroca
- Departamento de Microbiología del Suelo y la Planta, Estación Experimental del Zaidín, CSIC, Profesor Albareda 1, 18008 Granada, Spain;
| | - Cledir Santos
- Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco 4811230, Chile; (C.S.); (F.G.); (U.P.); (A.R.); (C.S.)
| | - Pablo Cornejo
- Escuela de Agronomía, Facultad de Ciencias Agronómicas y de los Alimentos, Pontificia Universidad Católica de Valparaíso, Quillota 2260000, Chile
- Centro Regional de Investigación e Innovación para la Sostenibilidad de la Agricultura y los Territorios Rurales, CERES, La Palma, Quillota 2260000, Chile
| | - Gladys Vidal
- Grupo de Ingeniería Ambiental y Biotecnología, Facultad de Ciencias Ambientales y Centro EULA-Chile, Universidad de Concepción, Concepción 4070411, Chile
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Xiang W, Guo Z, Han J, Gao Y, Ma F, Gong X. The apple autophagy-related gene MdATG10 improves drought tolerance and water use efficiency in transgenic apple plants. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 206:108214. [PMID: 38016369 DOI: 10.1016/j.plaphy.2023.108214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 10/19/2023] [Accepted: 11/20/2023] [Indexed: 11/30/2023]
Abstract
The Loess Plateau is the main apple production area in China; low precipitation is one of the most important factors limiting apple production here. Autophagy is a conserved process in eukaryotes that recycles cell contents or damaged macromolecules. Previously, we identified an autophagy-related gene MdATG10 from apple plants, which was involved in the responses to stressed conditions. In this study, we found that MdATG10 improved the drought tolerance and water use efficiency (WUE) of transgenic apple plants. MdATG10-overexpressing (OE) apple plants were more tolerant of short-term drought stress, as evidenced by their fewer drought-related injuries, compared with wild-type (WT) apple plants. In addition, the WUE of OE plants was higher than that of WT plants under long-term moderate water deficit conditions. The growth rate, biomass accumulation, photosynthetic efficiency, and stomatal aperture were higher in OE plants than in WT plants under long-term moderate drought conditions. During the process of adapting to drought, the expressions of genes involved in the abscisic acid (ABA) pathway were reduced in OE plants to decrease the synthesis of ABA, which helped maintain the stomatal opening for gas exchange. Furthermore, autophagic activity was higher in OE plants than in WT plants, as evidenced by the higher expressions of ATG genes and the greater number of autophagy bodies. In sum, our results suggested that overexpression of MdATG10 improved drought tolerance and WUE in apple plants, possibly by regulating stomatal movement and enhancing autophagic activity, which then enhanced the photosynthetic efficiency and reduced damage, as well as the reactive oxygen species (ROS) accumulation in apple plants.
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Affiliation(s)
- Weijia Xiang
- State Key Laboratory for Crop Stress Resistance and High-Efficiency Production/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Zijian Guo
- State Key Laboratory for Crop Stress Resistance and High-Efficiency Production/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Jifa Han
- State Key Laboratory for Crop Stress Resistance and High-Efficiency Production/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Yiran Gao
- State Key Laboratory for Crop Stress Resistance and High-Efficiency Production/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Fengwang Ma
- State Key Laboratory for Crop Stress Resistance and High-Efficiency Production/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
| | - Xiaoqing Gong
- State Key Laboratory for Crop Stress Resistance and High-Efficiency Production/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
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9
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Cerda A, Alvarez JM. Insights into molecular links and transcription networks integrating drought stress and nitrogen signaling. THE NEW PHYTOLOGIST 2024; 241:560-566. [PMID: 37974513 DOI: 10.1111/nph.19403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 10/03/2023] [Indexed: 11/19/2023]
Abstract
Drought and the availability of nitrate, the predominant source of nitrogen (N) in agriculture, are major factors limiting plant growth and crop productivity. The dissection of the transcriptional networks' components integrating droght stress and nitrate responses provides valuable insights into how plants effectively balance stress response with growth programs. Recent evidence in Arabidopsis thaliana indicates that transcription factors (TFs) involved in abscisic acid (ABA) signaling affect N metabolism and nitrate responses, and reciprocally, components of nitrate signaling might affect ABA and drought gene responses. Advances in understanding regulatory circuits of nitrate and drought crosstalk in plant tissues empower targeted genetic modifications to enhance plant development and stress resistance, critical traits for optimizing crop yield and promoting sustainable agriculture.
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Affiliation(s)
- Ariel Cerda
- Centro de Biotecnología Vegetal, Facultad de Ciencias, Universidad Andrés Bello, Santiago, 8370186, Chile
- Millennium Science Initiative - Millennium Institute for Integrative Biology (iBio), Santiago, 8331150, Chile
| | - José M Alvarez
- Centro de Biotecnología Vegetal, Facultad de Ciencias, Universidad Andrés Bello, Santiago, 8370186, Chile
- Millennium Science Initiative - Millennium Institute for Integrative Biology (iBio), Santiago, 8331150, Chile
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10
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Kitavi M, Gemenet DC, Wood JC, Hamilton JP, Wu S, Fei Z, Khan A, Buell CR. Identification of genes associated with abiotic stress tolerance in sweetpotato using weighted gene co-expression network analysis. PLANT DIRECT 2023; 7:e532. [PMID: 37794882 PMCID: PMC10546384 DOI: 10.1002/pld3.532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/28/2023] [Revised: 04/22/2023] [Accepted: 08/31/2023] [Indexed: 10/06/2023]
Abstract
Sweetpotato, Ipomoea batatas (L.), a key food security crop, is negatively impacted by heat, drought, and salinity stress. The orange-fleshed sweetpotato cultivar "Beauregard" was exposed to heat, salt, and drought treatments for 24 and 48 h to identify genes responding to each stress condition in leaves. Analysis revealed both common (35 up regulated, 259 down regulated genes in the three stress conditions) and unique sets of up regulated (1337 genes by drought, 516 genes by heat, and 97 genes by salt stress) and down regulated (2445 genes by drought, 678 genes by heat, and 204 genes by salt stress) differentially expressed genes (DEGs) suggesting common, yet stress-specific transcriptional responses to these three abiotic stressors. Gene Ontology analysis of down regulated DEGs common to both heat and salt stress revealed enrichment of terms associated with "cell population proliferation" suggestive of an impact on the cell cycle by the two stress conditions. To identify shared and unique gene co-expression networks under multiple abiotic stress conditions, weighted gene co-expression network analysis was performed using gene expression profiles from heat, salt, and drought stress treated 'Beauregard' leaves yielding 18 co-expression modules. One module was enriched for "response to water deprivation," "response to abscisic acid," and "nitrate transport" indicating synergetic crosstalk between nitrogen, water, and phytohormones with genes encoding osmotin, cell expansion, and cell wall modification proteins present as key hub genes in this drought-associated module. This research lays the groundwork for exploring to a further degree, mechanisms for abiotic stress tolerance in sweetpotato.
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Affiliation(s)
- Mercy Kitavi
- Research Technology Support Facility (RTSF)Michigan State UniversityEast LansingMichiganUSA
- Center for Applied Genetic TechnologiesUniversity of GeorgiaAthensGeorgiaUSA
| | - Dorcus C. Gemenet
- International Potato CenterLimaPeru
- International Maize and Wheat Improvement Center (CIMMYT), ICRAF HouseNairobiKenya
| | - Joshua C. Wood
- Center for Applied Genetic TechnologiesUniversity of GeorgiaAthensGeorgiaUSA
| | - John P. Hamilton
- Center for Applied Genetic TechnologiesUniversity of GeorgiaAthensGeorgiaUSA
- Department of Crop & Soil SciencesUniversity of GeorgiaAthensGeorgiaUSA
| | - Shan Wu
- Boyce Thompson InstituteCornell UniversityIthacaNew YorkUSA
| | - Zhangjun Fei
- Boyce Thompson InstituteCornell UniversityIthacaNew YorkUSA
| | - Awais Khan
- International Potato CenterLimaPeru
- Present address:
Plant Pathology and Plant‐Microbe Biology Section, School of Integrative Plant ScienceCornell UniversityGenevaNew YorkUSA
| | - C. Robin Buell
- Center for Applied Genetic TechnologiesUniversity of GeorgiaAthensGeorgiaUSA
- Department of Crop & Soil SciencesUniversity of GeorgiaAthensGeorgiaUSA
- Institute of Plant Breeding, Genetics, & GenomicsUniversity of GeorgiaAthensGeorgiaUSA
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11
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Ma Q, Zhao C, Hu S, Zuo K. Arabidopsis calcium-dependent protein kinase CPK6 regulates drought tolerance under high nitrogen by the phosphorylation of NRT1.1. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:5682-5693. [PMID: 37463320 DOI: 10.1093/jxb/erad277] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Accepted: 07/14/2023] [Indexed: 07/20/2023]
Abstract
Nitrogen (N) is an essential macronutrient for plant growth and development, and its availability is regulated to some extent by drought stress. Calcium-dependent protein kinases (CPKs) are a unique family of Ca2+ sensors with diverse functions in N uptake and drought-tolerance signaling pathways; however, how CPKs are involved in the crosstalk between drought stress and N transportation remains largely unknown. Here, we identify the drought-tolerance function of Arabidopsis CPK6 under high N conditions. CPK6 expression was induced by ABA and drought treatments. The mutant cpk6 was insensitive to ABA treatment and low N, but was sensitive to drought only under high N conditions. CPK6 interacted with the NRT1.1 (CHL1) protein and phosphorylated the Thr447 residue, which then repressed the NO3- transporting activity of Arabidopsis under high N and drought stress. Taken together, our results show that CPK6 regulates Arabidopsis drought tolerance through changing the phosphorylation state of NRT1.1, and improve our knowledge of N uptake in plants during drought stress.
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Affiliation(s)
- Qijun Ma
- Single Cell Research Center, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Chunyan Zhao
- Single Cell Research Center, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Shi Hu
- Single Cell Research Center, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Kaijing Zuo
- Single Cell Research Center, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai 200240, China
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12
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Xu W, Wuyun T, Chen J, Yu S, Zhang X, Zhang L. Responses of Trollius chinensis to drought stress and rehydration: From photosynthetic physiology to gene expression. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 201:107841. [PMID: 37331075 DOI: 10.1016/j.plaphy.2023.107841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 05/20/2023] [Accepted: 06/13/2023] [Indexed: 06/20/2023]
Abstract
Drought stress occurs more frequently in recent years due to the global climate change. Widely distributed in northern China, Mongolia, and Russia, Trollius chinensis Bunge has high medicinal and ornamental values and is often exposed to drought stress, while the mechanism underlying its drought response is still unclear. In this study, we applied 74-76% (control, CK), 49-51% (mild drought), 34-36% (moderate drought), and 19-21% (severe drought, SD) of the soil gravimetric water content to T. chinensis, and measured leaf physiological characteristics on the 0, 5th, 10th, 15th day after the soil reaching the set drought severities, and on the 10th day after rehydration. The results showed that many physiological parameters, such as chlorophyll contents, Fv/Fm, ΦPSⅡ, Pn, and gs decreased with the deepening of severity and duration of drought stress and recovered to some extent after rehydration. On the 10th day of drought stress, leaves in SD and CK were selected for RNA-Seq, and 1649 differentially expressed genes (DEGs) were found, including 548 up-regulated and 1101 down-regulated DEGs. Gene Ontology enrichment found that the DEGs were mainly enriched in catalytic activity and thylakoid. Koyto Encyclopedia of Genes and Genomes enrichment found that DEGs were enriched in some metabolic pathways such as carbon fixation and photosynthesis. Among them, the differential expression of genes related to photosynthesis process, ABA biosynthesis and signaling pathway, such as NCED, SnRK2, PsaD, PsbQ, and PetE, might explain why T. chinensis could tolerate and recover from as long as 15 days of severe drought conditions.
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Affiliation(s)
- Wenyi Xu
- College of Landscape Architecture, Zhejiang A&F University, Hangzhou, 311300, China; College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Tana Wuyun
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, 51006, Estonia.
| | - Jing Chen
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China
| | - Shuhan Yu
- College of Landscape Architecture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Xinyang Zhang
- College of Landscape Architecture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Lu Zhang
- College of Landscape Architecture, Zhejiang A&F University, Hangzhou, 311300, China.
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13
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Bělonožníková K, Černý M, Hýsková V, Synková H, Valcke R, Hodek O, Křížek T, Kavan D, Vaňková R, Dobrev P, Haisel D, Ryšlavá H. Casein as protein and hydrolysate: Biostimulant or nitrogen source for Nicotiana tabacum plants grown in vitro? PHYSIOLOGIA PLANTARUM 2023; 175:e13973. [PMID: 37402155 DOI: 10.1111/ppl.13973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 06/28/2023] [Accepted: 06/28/2023] [Indexed: 07/06/2023]
Abstract
In contrast to inorganic nitrogen (N) assimilation, the role of organic N forms, such as proteins and peptides, as sources of N and their impact on plant metabolism remains unclear. Simultaneously, organic biostimulants are used as priming agents to improve plant defense response. Here, we analysed the metabolic response of tobacco plants grown in vitro with casein hydrolysate or protein. As the sole source of N, casein hydrolysate enabled tobacco growth, while protein casein was used only to a limited extent. Free amino acids were detected in the roots of tobacco plants grown with protein casein but not in the plants grown with no source of N. Combining hydrolysate with inorganic N had beneficial effects on growth, root N uptake and protein content. The metabolism of casein-supplemented plants shifted to aromatic (Trp), branched-chain (Ile, Leu, Val) and basic (Arg, His, Lys) amino acids, suggesting their preferential uptake and/or alterations in their metabolic pathways. Complementarily, proteomic analysis of tobacco roots identified peptidase C1A and peptidase S10 families as potential key players in casein degradation and response to N starvation. Moreover, amidases were significantly upregulated, most likely for their role in ammonia release and impact on auxin synthesis. In phytohormonal analysis, both forms of casein influenced phenylacetic acid and cytokinin contents, suggesting a root system response to scarce N availability. In turn, metabolomics highlighted the stimulation of some plant defense mechanisms under such growth conditions, that is, the high concentrations of secondary metabolites (e.g., ferulic acid) and heat shock proteins.
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Affiliation(s)
- Kateřina Bělonožníková
- Department of Biochemistry, Faculty of Science, Charles University, Praha 2, Czech Republic
| | - Martin Černý
- Department of Molecular Biology and Radiobiology, Faculty of AgriSciences, Mendel University in Brno, Brno, Czech Republic
| | - Veronika Hýsková
- Department of Biochemistry, Faculty of Science, Charles University, Praha 2, Czech Republic
| | - Helena Synková
- Institute of Experimental Botany, Czech Academy of Sciences, Praha 6, Czech Republic
| | - Roland Valcke
- Molecular and Physical Plant Physiology, Faculty of Sciences, Hasselt University, Diepenbeek, Belgium
| | - Ondřej Hodek
- Department of Analytical Chemistry, Faculty of Science, Charles University, Praha 2, Czech Republic
| | - Tomáš Křížek
- Department of Analytical Chemistry, Faculty of Science, Charles University, Praha 2, Czech Republic
| | - Daniel Kavan
- Department of Biochemistry, Faculty of Science, Charles University, Praha 2, Czech Republic
| | - Radomíra Vaňková
- Institute of Experimental Botany, Czech Academy of Sciences, Praha 6, Czech Republic
| | - Petre Dobrev
- Institute of Experimental Botany, Czech Academy of Sciences, Praha 6, Czech Republic
| | - Daniel Haisel
- Institute of Experimental Botany, Czech Academy of Sciences, Praha 6, Czech Republic
| | - Helena Ryšlavá
- Department of Biochemistry, Faculty of Science, Charles University, Praha 2, Czech Republic
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14
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Taaime N, El Mejahed K, Choukr-Allah R, Bouabid R, Oukarroum A, El Gharous M. Optimization of macronutrients for improved grain yield of quinoa ( Chenopodium quinoa Wild.) crop under semi-arid conditions of Morocco. FRONTIERS IN PLANT SCIENCE 2023; 14:1146658. [PMID: 37441174 PMCID: PMC10333577 DOI: 10.3389/fpls.2023.1146658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Accepted: 06/06/2023] [Indexed: 07/15/2023]
Abstract
In the context of climate change, quinoa represents a potential alternative crop for increasing crops diversity, agricultural productivity, and farmer's income in semi-arid regions. However, appropriate crop management practices under limited water supply are still poorly documented. Quinoa, like other cultivated crops, needs optimum quantities of nutrients, especially nitrogen (N), phosphorus (P), and potassium (K), for better growth and high grain yield. To determine the adequate levels of nutrient requirements and their effect on quinoa growth and productivity, a field experiment was conducted during two growing seasons (2020-2021 and 2021-2022). The experiment was conducted in Ben Guerir region, north-central Morocco, and consisted of a randomized complete block design (RCBD) with three replications. The treatments studied consist of a combination of four N rates (0, 40, 80, and 120 kg ha-1), three P rates (0, 30, and 60 kg P2O5 ha-1), and three K rates (0, 60, and 120 kg K2O ha-1). The physiological, nutritional, and production parameters of quinoa were collected and analyzed. The results showed that the highest total biomass (3.9 t ha-1) and grain yield (0.8 t ha-1) under semi-arid conditions were obtained with 40 kg N ha-1, 60 kg P2O5 ha-1, and 120 kg K2O ha-1. The application of 40-60-120 kg ha-1 of N-P2O5-K2O increased plant height by 44%, chlorophyll content index by 96%, total biomass by 134%, grain yield by 112%, and seed weight by 118%. Among the three macronutrients, N was the most limiting factor, followed by K and P. Nutrients uptake data showed that quinoa needs 60 kg N, 26 kg P2O5, and 205 kg K2O to produce 1 t of grain yield. Our field results provide future recommendations for improving the agronomic and environmental sustainability of quinoa cultivation in dryland areas in Morocco.
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Affiliation(s)
- Nawal Taaime
- Agricultural Innovation and Technology Transfer Center, Agrobiosciences, Mohammed VI Polytechnic University, Ben Guerir, Morocco
| | - Khalil El Mejahed
- Agricultural Innovation and Technology Transfer Center, Agrobiosciences, Mohammed VI Polytechnic University, Ben Guerir, Morocco
| | - Redouane Choukr-Allah
- Agricultural Innovation and Technology Transfer Center, Agrobiosciences, Mohammed VI Polytechnic University, Ben Guerir, Morocco
| | - Rachid Bouabid
- Department of Agronomy, National School of Agriculture, Meknes, Morocco
| | - Abdallah Oukarroum
- Plant Stress Physiology Laboratory, Agrobiosciences, Mohammed VI Polytechnic University, Ben Guerir, Morocco
| | - Mohamed El Gharous
- Agricultural Innovation and Technology Transfer Center, Agrobiosciences, Mohammed VI Polytechnic University, Ben Guerir, Morocco
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15
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Mishra D, Chitara MK, Upadhayay VK, Singh JP, Chaturvedi P. Plant growth promoting potential of urea doped calcium phosphate nanoparticles in finger millet ( Eleusine coracana (L.) Gaertn.) under drought stress. FRONTIERS IN PLANT SCIENCE 2023; 14:1137002. [PMID: 37255562 PMCID: PMC10225717 DOI: 10.3389/fpls.2023.1137002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Accepted: 04/12/2023] [Indexed: 06/01/2023]
Abstract
Drought is a leading threat that impinges on plant growth and productivity. Nanotechnology is considered an adequate tool for resolving various environmental issues by offering avant-garde and pragmatic solutions. Using nutrients in the nano-scale including CaP-U NPs is a novel fertilization strategy for crops. The present study was conducted to develop and utilize environment-friendly urea nanoparticles (NPs) based nano-fertilizers as a crop nutrient. The high solubility of urea molecules was controlled by integrating them with a matrix of calcium phosphate nanoparticles (CaP NPs). CaP NPs contain high phosphorous and outstanding biocompatibility. Scanning electron microscopy (FE-SEM), transmission electron microscopy (TEM) and X-ray diffraction analysis (XRD) were used to characterize the fabricated NPs. FE-SEM determined no areas of phase separation in urea and calcium phosphate, indicating the successful formation of an encapsulated nanocomposite between the two nano matrices. TEM examination confirmed a fiber-like structure of CaP-U NPs with 15 to 50 nm diameter and 100 to 200 nm length. The synthesized CaP-U NPs and bulk urea (0.0, 0.1% and 0.5%) were applied by foliar sprays at an interval of 15 days on pre-sowed VL-379 variety of finger millet (Eleusine coracana (L.) Gaertn.), under irrigated and drought conditions. The application of the CaP-U NPs significantly enhanced different plant growth attributes such as shoot length (29.4 & 41%), root length (46.4 & 51%), shoot fresh (33.6 & 55.8%) and dry weight (63 & 59.1%), and root fresh (57 & 61%) and dry weight (78 & 80.7%), improved pigment system (chlorophyll) and activated plant defense enzymes such as proline (35.4%), superoxide dismutase (47.7%), guaiacol peroxidase (30.2%), ascorbate peroxidase (70%) under both irrigated and drought conditions. Superimposition of five treatment combinations on drought suggested that CaP-U NPs at 0.5 followed by 0.1% provided the highest growth indices and defense-related enzymes, which were significantly different. Overall, our findings suggested that synthesized CaP-U NPs treatment of finger millet seeds improved plant growth and enzymatic regulation, particularly more in drought conditions providing insight into the strategy for not only finger millet but probably for other commercial cereals crops which suffer from fluctuating environmental conditions.
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Affiliation(s)
- Dhruv Mishra
- Department of Biological Sciences, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand (U.K.), India
| | - Manoj Kumar Chitara
- Department of Plant Pathology, College of Agriculture, G.B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand, India
| | - Viabhav Kumar Upadhayay
- Department of Microbiology, College of Basic Sciences & Humanities, Dr. Rajendra Prasad Central Agricultural University, Samastipur, Bihar, India
| | - Jagat Pal Singh
- Department of Physics, College of Basic Sciences and Humanities, G. B. Pant University of Agriculture and Technology, Pantnagar, India
| | - Preeti Chaturvedi
- Department of Biological Sciences, College of Basic Sciences and Humanities, G.B. Pant University of Agriculture and Technology, Pantnagar, Uttarakhand (U.K.), India
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16
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Gai Z, Zhang M, Zhang P, Zhang J, Liu J, Cai L, Yang X, Zhang N, Yan Z, Liu L, Feng G. 2-Oxoglutarate contributes to the effect of foliar nitrogen on enhancing drought tolerance during flowering and grain yield of soybean. Sci Rep 2023; 13:7274. [PMID: 37142711 PMCID: PMC10160060 DOI: 10.1038/s41598-023-34403-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2023] [Accepted: 04/28/2023] [Indexed: 05/06/2023] Open
Abstract
Drought severely affects the growth and yield of soybean plants especially during the flowering period. To investigate the effect of 2-oxoglutarate (2OG) in combination with foliar nitrogen (N) at flowering stage on drought resistance and seed yield of soybean under drought stress. This experiment was conducted in 2021 and 2022 on drought-resistant variety (Hefeng 50) and drought-sensitive variety (Hefeng 43) soybean plants treated with foliar N (DS + N) and 2-oxoglutarate (DS + 2OG) at flowering stage under drought stress. The results showed that drought stress at flowering stage significantly increased leaf malonaldehyde (MDA) content and reduced soybean yield per plant. However, superoxide dismutase (SOD), peroxidase (POD) and catalase (CAT) activities were significantly increased by foliar N treatment, and 2-oxoglutarate synergistically with foliar N treatment (DS + N + 2OG) was more beneficial to plant photosynthesis. 2-oxoglutarate significantly enhanced plant N content, glutamine synthetase (GS) and glutamate synthase (GOGAT) activity. Furthermore, 2-oxoglutarate increased the accumulation of proline and soluble sugars under drought stress. Under drought stress, soybean seed yield was increased by DS + N + 2OG treatment by 16.48-17.10% and 14.96-18.84% in 2021 and 2022, respectively. Thus, the combination of foliar N and 2-oxoglutarate better mitigated the adverse effects of drought stress and could better compensate for the yield loss of soybean under drought stress.
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Affiliation(s)
- Zhijia Gai
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Maoming Zhang
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Pengfei Zhang
- Department of Agronomy, Northeast Agricultural University, Harbin, 15000, China
| | - Jingtao Zhang
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Jingqi Liu
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Lijun Cai
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Xu Yang
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Na Zhang
- Jiamusi Branch, Heilongjiang Academy of Agricultural Sciences/Key Laboratory of Breeding and Cultivation of Main Crops in Sanjiang Plain, Jiamusi, 154007, China
| | - Zhengnan Yan
- College of Horticulture, Qingdao Agricultural University, Qingdao, 266109, China
| | - Lei Liu
- College of Resources and Environment, Jilin Agricultural University, Changchun, 130118, China.
- State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China.
| | - Guozhong Feng
- College of Resources and Environment, Jilin Agricultural University, Changchun, 130118, China.
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17
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Machado J, Vasconcelos MW, Soares C, Fidalgo F, Heuvelink E, Carvalho SMP. Young Tomato Plants Respond Differently under Single or Combined Mild Nitrogen and Water Deficit: An Insight into Morphophysiological Responses and Primary Metabolism. PLANTS (BASEL, SWITZERLAND) 2023; 12:1181. [PMID: 36904041 PMCID: PMC10005627 DOI: 10.3390/plants12051181] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Revised: 02/21/2023] [Accepted: 02/27/2023] [Indexed: 06/18/2023]
Abstract
This study aimed to understand the morphophysiological responses and primary metabolism of tomato seedlings subjected to mild levels of nitrogen and/or water deficit (50% N and/or 50% W). After 16 days of exposure, plants grown under the combined deficit showed similar behavior to the one found upon exposure to single N deficit. Both N deficit treatments resulted in a significantly lower dry weight, leaf area, chlorophyll content, and N accumulation but in a higher N use efficiency when compared to control (CTR) plants. Moreover, concerning plant metabolism, at the shoot level, these two treatments also responded in a similar way, inducing higher C/N ratio, nitrate reductase (NR) and glutamine synthetase (GS) activity, expression of RuBisCO encoding genes as well as a downregulation of GS2.1 and GS2.2 transcripts. Interestingly, plant metabolic responses at the root level did not follow the same pattern, with plants under combined deficit behaving similarly to W deficit plants, resulting in enhanced nitrate and proline concentrations, NR activity, and an upregulation of GS1 and NR genes than in CTR plants. Overall, our data suggest that the N remobilization and osmoregulation strategies play a relevant role in plant acclimation to these abiotic stresses and highlight the complexity of plant responses under a combined N+W deficit.
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Affiliation(s)
- Joana Machado
- GreenUPorto—Sustainable Agrifood Production Research Centre/Inov4Agro, DGAOT, Faculty of Sciences, University of Porto, Campus de Vairão, Rua da Agrária 747, 4485-646 Vairão, Portugal;
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal
- Horticulture and Product Physiology Group, Department of Plant Sciences, Wageningen University, P.O. Box 16, 6700 AA Wageningen, The Netherlands
| | - Marta W. Vasconcelos
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua Diogo Botelho 1327, 4169-005 Porto, Portugal
| | - Cristiano Soares
- GreenUPorto—Sustainable Agrifood Production Research Centre/Inov4Agro, Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre s/n, 4169-007 Porto, Portugal
| | - Fernanda Fidalgo
- GreenUPorto—Sustainable Agrifood Production Research Centre/Inov4Agro, Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre s/n, 4169-007 Porto, Portugal
| | - Ep Heuvelink
- Horticulture and Product Physiology Group, Department of Plant Sciences, Wageningen University, P.O. Box 16, 6700 AA Wageningen, The Netherlands
| | - Susana M. P. Carvalho
- GreenUPorto—Sustainable Agrifood Production Research Centre/Inov4Agro, DGAOT, Faculty of Sciences, University of Porto, Campus de Vairão, Rua da Agrária 747, 4485-646 Vairão, Portugal;
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18
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Liu W, Liu L, Yan R, Gao J, Wu S, Liu Y. A comprehensive meta-analysis of the impacts of intensified drought and elevated CO 2 on forage growth. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 327:116885. [PMID: 36455442 DOI: 10.1016/j.jenvman.2022.116885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 11/17/2022] [Accepted: 11/24/2022] [Indexed: 06/17/2023]
Abstract
Forage crops are used worldwide as key feed sources for dairy systems. However, their productivity and quality are limited due to intensified drought events, elevated carbon dioxide (CO2), and their interaction with climate change, with consequences for the security of animal husbandry and the agricultural economy. Although studies have quantified the impacts of such stresses on forage growth, these impacts have been less systematically investigated in a global context due to differences among various forage groups, regional microclimates, and environmental factors. Herein we employed nine forage growth-related variables involving three perspectives, i.e., photosynthetic parameters, production, and quality, from research articles published between 1990 and 2021 via a meta-analysis. A linear mixed-effect model was then used to explore the quantitative relationship between these factors in a restricted dataset. Decreasing trends in all four photosynthetic parameters were detected across different eco-geographical regions with increasing drought stress. The maximum decrease in DMY occurred in the Mediterranean, with 52.8% under drought conditions. Globally, eCO2 significantly increased photosynthetic rate (Pn) and instantaneous water use efficiency (WUEi) by 40.8% and 62.1%, respectively, which also had positive effects on forage dry matter yield (DMY) (+25.1%), especially for forage in Northern Europe. However, this stress would significantly decrease forage quality by decreasing crude protein (CP) (-19.7%) and nitrogen content (N content) (-13.5%). These negative impacts would be aggravated under the co-occurrence of drought and eCO2, including a significant increase in WUEi (+111.1%) and a decrease in DMY (-12.3%). Gramineae showed a more sensitive response to drought stress in photosynthetic parameters and DMY than Leguminosae, but the latter exhibited a better response in photosynthetic parameters and production under eCO2. Our analysis provides a consensus concerning how the growth parameters of forage have changed under environmental stresses.
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Affiliation(s)
- Wanlu Liu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Science, Beijing, 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, 100049, China.
| | - Lulu Liu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Science, Beijing, 100101, China.
| | - Rui Yan
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Science, Beijing, 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, 100049, China.
| | - Jiangbo Gao
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Science, Beijing, 100101, China.
| | - Shaohong Wu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Science, Beijing, 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, 100049, China.
| | - Yanhua Liu
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Science, Beijing, 100101, China; College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, 100049, China.
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Hajeb M, Hamzeh S, Alavipanah SK, Neissi L, Verrelst J. Simultaneous retrieval of sugarcane variables from Sentinel-2 data using Bayesian regularized neural network. INTERNATIONAL JOURNAL OF APPLIED EARTH OBSERVATION AND GEOINFORMATION : ITC JOURNAL 2023; 116:103168. [PMID: 36644684 PMCID: PMC7614048 DOI: 10.1016/j.jag.2022.103168] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Quantifying biophysical and biochemical vegetation variables is of great importance in precision agriculture. Here, the ability of artificial neural networks (ANNs) to generate multiple outputs is exploited to simultaneously retrieve Leaf area index (LAI), leaf sheath moisture (LSM), leaf chlorophyll content (LCC), and leaf nitrogen concentration (LNC) of sugarcane from Sentinel-2 spectra. We apply a type of ANNs, Bayesian Regularized ANN (BRANN), which incorporates the Bayes' theorem into a regularization scheme to tackle the overfitting problem of ANN and improve its generalizability. Quantitatively assessing the result accuracy indicated RMSE values of 0.48 (m2/m2) for LAI, 2.36 (% wb) for LSM, 5.85 (μg/cm2) for LCC, and 0.23 (%) for LNC, applying simultaneous retrieval. It was demonstrated that simultaneous retrievals of the variables outperformed the individual retrievals. The superiority of the proposed BRANN over a conventional ANN trained with the Levenberg-Marquardt algorithm was confirmed through statistical comparison of their results. The model was applied over the entire Sentinel-2 images to map the considered variables. The maps were probed to qualitatively evaluate the model performance. The results indicated that the retrievals reasonably represent spatial and temporal variations of the variables. Generally, this study demonstrated that the BRANN simultaneous retrieval model can provide faster and more accurate retrievals than those obtained from conventional ANNs and individual retrievals.
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Affiliation(s)
- Mohammad Hajeb
- Department of Remote Sensing and GIS, Faculty of Geography, University of Tehran, Tehran, Iran
| | - Saeid Hamzeh
- Department of Remote Sensing and GIS, Faculty of Geography, University of Tehran, Tehran, Iran
| | - Seyed Kazem Alavipanah
- Department of Remote Sensing and GIS, Faculty of Geography, University of Tehran, Tehran, Iran
| | - Lamya Neissi
- Sugarcane Research and Training Institute and By-products Development of Khuzestan, Khuzestan, Iran
| | - Jochem Verrelst
- Image Processing Laboratory (IPL), Parc Científic, Universitat de Val encia, València, Spain
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Fang J, Tan X, Yang Z, Shen W, Peñuelas J. Contrasting terpene emissions from canopy and understory vegetation in response to increases in nitrogen deposition and seasonal changes in precipitation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 317:120800. [PMID: 36473640 DOI: 10.1016/j.envpol.2022.120800] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Revised: 11/28/2022] [Accepted: 11/29/2022] [Indexed: 06/17/2023]
Abstract
Given global change and shifts in climate are expected to increase BVOC emissions, the quantification of links between environmental conditions, plant physiology, and terpene emission dynamics is required to improve model predictions of ecosystem responses to increasing nitrogen deposition and changes in precipitation regimes. Here, we conducted a two-factor field experiment in sub-tropical forest plots to determine effects of N addition (N), precipitation change (PC), and NP (N and PC combined treatment) on wet and dry season terpene emissions and leaf photosynthetic parameters from canopy and understory species. Changes of β-ocimene and sabinene under PC and NP in the wet season (0.4-5.6-fold change) were the largest contributor to changes in total terpene emissions. In the dry season, the standardized total terpene emission rate was enhanced by 144.9% under N addition and 185.7% under PC for the understory species, while the total terpene emission rate was lower under NP than N addition and PC, indicating that N addition tended to moderate increases in PC-induced understory total terpene emissions. In the wet season, the total terpene emission rate under N and PC was close to ambient conditions for the canopy species, while the total terpene emission rate was enhanced by 54.6% under NP, indicating that N and PC combined treatment had an additive effect on canopy total terpene emissions. Total terpene emission rates increased with rates of net leaf photosynthesis (Pn) and transpiration (Tr) and there was a decoupling between terpene emission rates and Pn under NP, indicating that complex effects between PC and N decreased the regularity of single-factor effects. We recommend that N and PC interaction effects are included in models for the prediction of terpene emissions, particularly from canopy vegetation during the wet season as a major source of forest ecosystem terpene emissions.
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Affiliation(s)
- Jianbo Fang
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xiangping Tan
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Ziyin Yang
- University of Chinese Academy of Sciences, Beijing, 100049, China; Key Laboratory of South China Agricultural Plant Molecular Analysis and Genetic Improvement & Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, 510650, China
| | - Weijun Shen
- Guangxi Key Laboratory of Forest Ecology and Conservation, State Key Laboratory for Conservation and Utilization of Agro-bioresources, College of Forestry, Guangxi University, Nanning, Guangxi, 530004, China.
| | - Josep Peñuelas
- CREAF, Campus Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Barcelona, 08193, Catalonia, Spain; CSIC, Global Ecology Unit CREAF - CSIC-UAB, Bellaterra, Barcelona, 08193, Catalonia, Spain
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Kishchenko O, Stepanenko A, Straub T, Zhou Y, Neuhäuser B, Borisjuk N. Ammonium Uptake, Mediated by Ammonium Transporters, Mitigates Manganese Toxicity in Duckweed, Spirodela polyrhiza. PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12010208. [PMID: 36616338 PMCID: PMC9824425 DOI: 10.3390/plants12010208] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 12/27/2022] [Accepted: 12/30/2022] [Indexed: 06/12/2023]
Abstract
Nitrogen is an essential nutrient that affects all aspects of the growth, development and metabolic responses of plants. Here we investigated the influence of the two major sources of inorganic nitrogen, nitrate and ammonium, on the toxicity caused by excess of Mn in great duckweed, Spirodela polyrhiza. The revealed alleviating effect of ammonium on Mn-mediated toxicity, was complemented by detailed molecular, biochemical and evolutionary characterization of the species ammonium transporters (AMTs). Four genes encoding AMTs in S. polyrhiza, were classified as SpAMT1;1, SpAMT1;2, SpAMT1;3 and SpAMT2. Functional testing of the expressed proteins in yeast and Xenopus oocytes clearly demonstrated activity of SpAMT1;1 and SpAMT1;3 in transporting ammonium. Transcripts of all SpAMT genes were detected in duckweed fronds grown in cultivation medium, containing a physiological or 50-fold elevated concentration of Mn at the background of nitrogen or a mixture of nitrate and ammonium. Each gene demonstrated an individual expression pattern, revealed by RT-qPCR. Revealing the mitigating effect of ammonium uptake on manganese toxicity in aquatic duckweed S. polyrhiza, the study presents a comprehensive analysis of the transporters involved in the uptake of ammonium, shedding a new light on the interactions between the mechanisms of heavy metal toxicity and the regulation of the plant nitrogen metabolism.
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Affiliation(s)
- Olena Kishchenko
- Jiangsu Key Laboratory for Eco-Agricultural Biotechnology around Hongze Lake, Jiangsu Collaborative Innovation Centre of Regional Modern Agriculture and Environmental Protection, Huaiyin Normal University, West Changjiang Road 111, Huai’an 223000, China
- Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Gatersleben, Germany
- Institute of Cell Biology and Genetic Engineering, National Academy of Science of Ukraine, Acad. Zabolotnogo Str. 148, 03143 Kyiv, Ukraine
| | - Anton Stepanenko
- Jiangsu Key Laboratory for Eco-Agricultural Biotechnology around Hongze Lake, Jiangsu Collaborative Innovation Centre of Regional Modern Agriculture and Environmental Protection, Huaiyin Normal University, West Changjiang Road 111, Huai’an 223000, China
- Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Gatersleben, Germany
- Institute of Cell Biology and Genetic Engineering, National Academy of Science of Ukraine, Acad. Zabolotnogo Str. 148, 03143 Kyiv, Ukraine
| | - Tatsiana Straub
- Institute of Crop Science, Nutritional Crop Physiology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Yuzhen Zhou
- Jiangsu Key Laboratory for Eco-Agricultural Biotechnology around Hongze Lake, Jiangsu Collaborative Innovation Centre of Regional Modern Agriculture and Environmental Protection, Huaiyin Normal University, West Changjiang Road 111, Huai’an 223000, China
| | - Benjamin Neuhäuser
- Institute of Crop Science, Nutritional Crop Physiology, University of Hohenheim, 70593 Stuttgart, Germany
| | - Nikolai Borisjuk
- Jiangsu Key Laboratory for Eco-Agricultural Biotechnology around Hongze Lake, Jiangsu Collaborative Innovation Centre of Regional Modern Agriculture and Environmental Protection, Huaiyin Normal University, West Changjiang Road 111, Huai’an 223000, China
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22
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Gao H, Yu W, Yang X, Liang J, Sun X, Sun M, Xiao Y, Peng F. Silicon enhances the drought resistance of peach seedlings by regulating hormone, amino acid, and sugar metabolism. BMC PLANT BIOLOGY 2022; 22:422. [PMID: 36045325 PMCID: PMC9434905 DOI: 10.1186/s12870-022-03785-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/05/2022] [Accepted: 08/03/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND Drought is one of the main concerns worldwide and restricts the development of agriculture. Silicon improves the drought resistance of plants, but the underlying mechanism remains unclear. RESULTS We sequenced the transcriptomes of both control and silicon-treated peach seedlings under drought stress to identify genes or gene networks that could be managed to increase the drought tolerance of peach seedlings. Peach (Prunus persica) seedlings were used to analyse the effects of silicon on plant growth and physiological indexes related to drought resistance under drought stress. The results showed that silicon addition improved the water use efficiency, antioxidant capacity, and net photosynthetic rate, inhibition of stomatal closure, promoted the development of roots, and further regulated the synthesis of hormones, amino acids and sugars in peach seedlings. A comparative transcriptome analysis identified a total of 2275 genes that respond to silicon under drought stress. These genes were mainly involved in ion transport, hormone and signal transduction, biosynthetic and metabolic processes, stress and defence responses and other processes. We analysed the effects of silicon on the modulation of stress-related hormonal crosstalk and amino acid and sugar metabolism. The results showed that silicon promotes zeatin, gibberellin, and auxin biosynthesis, inhibits the synthesis of abscisic acid, then promote lateral root development and inhibit stomatal closure, and regulates the signal transduction of auxin, cytokinin, gibberellin and salicylic acid. Silicon also regulates the metabolism of various amino acids and promotes the accumulation of sucrose and glucose to improve drought resistance of peach seedlings. CONCLUSIONS Silicon enhanced the drought resistance of peach seedlings by regulating stress-related hormone synthesis and signal transduction, and regulating amino acid and sugar metabolism.
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Affiliation(s)
- Huaifeng Gao
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China
| | - Wenying Yu
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China
| | - Xiaoqing Yang
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China
| | - Jiahui Liang
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China
| | - Xiwu Sun
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China
| | - Maoxiang Sun
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China
| | - Yuansong Xiao
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China.
| | - Futian Peng
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, China.
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23
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Multiple Facets of Nitrogen: From Atmospheric Gas to Indispensable Agricultural Input. LIFE (BASEL, SWITZERLAND) 2022; 12:life12081272. [PMID: 36013451 PMCID: PMC9410007 DOI: 10.3390/life12081272] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 08/08/2022] [Accepted: 08/16/2022] [Indexed: 11/17/2022]
Abstract
Nitrogen (N) is a gas and the fifth most abundant element naturally found in the atmosphere. N's role in agriculture and plant metabolism has been widely investigated for decades, and extensive information regarding this subject is available. However, the advent of sequencing technology and the advances in plant biotechnology, coupled with the growing interest in functional genomics-related studies and the various environmental challenges, have paved novel paths to rediscovering the fundamentals of N and its dynamics in physiological and biological processes, as well as biochemical reactions under both normal and stress conditions. This work provides a comprehensive review on multiple facets of N and N-containing compounds in plants disseminated in the literature to better appreciate N in its multiple dimensions. Here, some of the ancient but fundamental aspects of N are revived and the advances in our understanding of N in the metabolism of plants is portrayed. It is established that N is indispensable for achieving high plant productivity and fitness. However, the use of N-rich fertilizers in relatively higher amounts negatively affects the environment. Therefore, a paradigm shift is important to shape to the future use of N-rich fertilizers in crop production and their contribution to the current global greenhouse gases (GHGs) budget would help tackle current global environmental challenges toward a sustainable agriculture.
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24
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Huang HX, Cao Y, Xin KJ, Liang RH, Chen YT, Qi JJ. Morphological and physiological changes in Artemisia selengensis under drought and after rehydration recovery. FRONTIERS IN PLANT SCIENCE 2022; 13:851942. [PMID: 35991406 PMCID: PMC9389366 DOI: 10.3389/fpls.2022.851942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Accepted: 07/11/2022] [Indexed: 06/15/2023]
Abstract
Changes in global climate and precipitation patterns have exacerbated the existing uneven distribution of water, causing many plants to face the alternate situation of drought and water flooding. We studied the growth and physiological response of the wetland plant Artemisia selengensis to drought and rehydration. In this study, Artemisia selengensis seedlings were subjected to 32.89% (SD), 47.36 % (MD), 60.97% (MID), and 87.18 % (CK) field water holding capacity for 70 days, followed by 14 days of rehydration. The results showed that drought inhibited the increase of plant height, basal diameter, and biomass accumulation under SD and MD, but the root shoot ratio (R/S) increased. Drought stress also decreased the content of total chlorophyll (Chl), chlorophyll a (Chl-a), chlorophyll b (Chl-b), and carotenoid (Car). Soluble sugar (SS) and proline (Pro) were accumulated rapidly under drought, and the relative water content (RWC) of leaves was kept at a high level of 80%. After rehydration, the plant height, basal diameter, biomass, and R/S ratio could not be recovered under SD and MD, but these indicators were completely recovered under MID. The RWC, Chl, Chl-a, Chl-b, Car, and osmotic substances were partially or completely recovered. In conclusion, Artemisia selengensis not only can improve drought resistance by increasing the R/S ratio and osmotic substances but also adopt the compensatory mechanism during rehydration. It is predictable that A. selengensis may benefit from possible future aridification of wetlands and expand population distribution.
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Affiliation(s)
- Hui-Xiong Huang
- School of Geography and Environment, Jiangxi Normal University, Nanchang, China
- Nanchang Base of International Centre on Space Technologies for Natural and Cultural Heritage Under the Auspices of UNESCO, Nanchang, China
| | - Yun Cao
- School of Geography and Environment, Jiangxi Normal University, Nanchang, China
- Nanchang Base of International Centre on Space Technologies for Natural and Cultural Heritage Under the Auspices of UNESCO, Nanchang, China
- Key Laboratory of Poyang Lake Wetland and Watershed Research, Ministry of Education, Nanchang, China
| | - Kai-Jing Xin
- School of Geography and Environment, Jiangxi Normal University, Nanchang, China
| | - Rong-Hua Liang
- School of Geography and Environment, Jiangxi Normal University, Nanchang, China
| | - Yi-Ting Chen
- School of Geography and Environment, Jiangxi Normal University, Nanchang, China
| | - Jia-Jun Qi
- School of Geography and Environment, Jiangxi Normal University, Nanchang, China
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25
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Physiological responses of Amaranthus cruentus L. to drought stress under sufficient- and deficient-nitrogen conditions. PLoS One 2022; 17:e0270849. [PMID: 35793322 PMCID: PMC9258897 DOI: 10.1371/journal.pone.0270849] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Accepted: 06/20/2022] [Indexed: 12/05/2022] Open
Abstract
Water and nitrogen availability are two major environmental factors that can impair plant growth, and when combined, their effects on plant performance can be either intensified or reduced. The objective of this study was to analyze the influence of nitrogen availability on the responses of Amaranthus cruentus’s metabolism to water stress. The plants were cultivated in plastic pots filled with vermiculite, kept under greenhouse conditions, and were watered three times a week with 70% of a full strength nitrogen-free Long Ashton solution, containing 1.97 or 9.88 kg N ha−1 as ammonium nitrate. Photosynthetic parameters were evaluated in planta, and leaves were harvested for chemical analysis of photosynthetic pigments, proline, and phenolic contents. Higher nitrogen supply increased the shoot dry matter, photosynthetic pigments, photosynthesis, stomatal conductance, transpiration, total leaf nitrogen, proline, nitrate, and ammonium but reduced the concentration of flavonoids and total phenols. Six days of water stress did not affect dry matter, photosynthetic pigments, leaf nitrogen, ammonium, or specialized metabolites but increased the proline under high nitrogen and negatively affected stomatal conductance, transpiration, photosynthesis, relative water content, instantaneous water use efficiency, and leaf nitrate. The negative effect was more pronounced under high nitrogen supply. The results show that the addition of a high amount of nitrogen made the physiological processes of plants more sensitive to water stress, indicating that the plant response to water restriction depends on the interaction between the different environmental stressors to which the plants are subjected.
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26
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Yue C, Chen Q, Hu J, Li C, Luo L, Zeng L. Genome-Wide Identification and Characterization of GARP Transcription Factor Gene Family Members Reveal Their Diverse Functions in Tea Plant ( Camellia sinensis). FRONTIERS IN PLANT SCIENCE 2022; 13:947072. [PMID: 35845671 PMCID: PMC9280663 DOI: 10.3389/fpls.2022.947072] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2022] [Accepted: 06/02/2022] [Indexed: 06/15/2023]
Abstract
Golden2, ARR-B, Psr1 (GARP) proteins are plant-specific transcription factors that play vital and diverse roles in plants. However, systematic research on the GARP gene family in plants, including tea plant (Camellia sinensis), is scarce. In this study, a total of 69 GARP genes were identified and characterized from the tea plant genome based on the B-motif sequence signature. The CsGARP genes were clustered into five subfamilies: PHR1/PHL1, KAN, NIGT1/HRS1/HHO, GLK and ARR-B subfamilies. The phylogenetic relationships, gene structures, chromosomal locations, conserved motifs and regulatory cis-acting elements of the CsGARP family members were comprehensively analyzed. The expansion of CsGARP genes occurred via whole-genome duplication/segmental duplication, proximal duplication, and dispersed duplication under purifying selective pressure. The expression patterns of the CsGARP genes were systematically explored from various perspectives: in different tissues during different seasons; in different leaf color stages of tea plant; under aluminum treatment and nitrogen treatment; and in response to abiotic stresses such as cold, drought and salt and to biotic stress caused by Acaphylla theae. The results demonstrate that CsGARP family genes are ubiquitously expressed and play crucial roles in the regulation of growth and development of tea plant and the responses to environmental stimuli. Collectively, these results not only provide valuable information for further functional investigations of CsGARPs in tea plant but also contribute to broadening our knowledge of the functional diversity of GARP family genes in plants.
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Affiliation(s)
- Chuan Yue
- College of Food Science, Tea Research Institute, Southwest University, Chongqing, China
- Chongqing Key Laboratory of Speciality Food Co-built by Sichuan and Chongqing, Southwest University, Chongqing, China
| | - Qianqian Chen
- College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Juan Hu
- Key Laboratory of Tea Science in Universities of Fujian Province, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Congcong Li
- Key Laboratory of Tea Science in Universities of Fujian Province, College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Liyong Luo
- College of Food Science, Tea Research Institute, Southwest University, Chongqing, China
- Chongqing Key Laboratory of Speciality Food Co-built by Sichuan and Chongqing, Southwest University, Chongqing, China
| | - Liang Zeng
- College of Food Science, Tea Research Institute, Southwest University, Chongqing, China
- Chongqing Key Laboratory of Speciality Food Co-built by Sichuan and Chongqing, Southwest University, Chongqing, China
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Tripodi P, Figàs MR, Leteo F, Soler S, Díez MJ, Campanelli G, Cardi T, Prohens J. Genotypic and Environmental Effects on Morpho-Physiological and Agronomic Performances of a Tomato Diversity Panel in Relation to Nitrogen and Water Stress Under Organic Farming. FRONTIERS IN PLANT SCIENCE 2022; 13:fpls-13-936596. [PMID: 35845687 PMCID: PMC9277548 DOI: 10.3389/fpls.2022.936596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/05/2022] [Accepted: 06/06/2022] [Indexed: 06/15/2023]
Abstract
The agricultural scenario of the upcoming decades will face major challenges for the increased and sustainable agricultural production and the optimization of the efficiency of water and fertilizer inputs. Considering the current and foreseen water scarcity in several marginal and arid areas and the need for a more sustainable farming production, the selection and development of cultivars suitable to grow under low-input conditions is an urgent need. In this study, we assayed 42 tomato genotypes for thirty-two morpho-physiological and agronomic traits related to plant, fruit, and root characteristics under standard (control) and no-nitrogen fertilization or water deficit (30% of the amount given to non-stressed trials) treatments in two sites (environments), which corresponded to organic farms located in Italy and Spain. A broad range of variation was found for all traits, with significant differences between the applied treatments and the cultivation sites. Dissection of genotypic (G), environmental (E), and treatment (T) factors revealed that the three main factors were highly significant for many traits, although G was the main source of variation in most cases. G × E interactions were also important, while G × T and E × T were less relevant. Only fruit weight and blossom end rot were highly significant for the triple interaction (G × E × T). Reduction of water supply significantly increased the soluble solid content in both locations, whereas both nitrogen and water stress led to a general decrease in fruit weight and total yield. Despite so, several accessions exhibited better performances than the control when cultivated under stress. Among the accessions evaluated, hybrids were promising in terms of yield performance, while overall landraces and heirlooms exhibited a better quality. This suggests the possibility of exploiting both the variation within ancient varieties and the heterosis for yield of hybrids to select and breed new varieties with better adaptation to organic farming conditions, both under optimal and suboptimal conditions. The results shed light on the strategies to develop novel varieties for organic farming, giving hints into the management of inputs to adopt for a more sustainable tomato cultivation.
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Affiliation(s)
- Pasquale Tripodi
- CREA Research Centre for Vegetable and Ornamental Crops, Pontecagnano, Italy
| | - Maria R. Figàs
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain
| | - Fabrizio Leteo
- CREA Research Centre for Vegetable and Ornamental Crops, Monsampolo del Tronto, Italy
| | - Salvador Soler
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain
| | - María José Díez
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain
| | - Gabriele Campanelli
- CREA Research Centre for Vegetable and Ornamental Crops, Monsampolo del Tronto, Italy
| | - Teodoro Cardi
- CREA Research Centre for Vegetable and Ornamental Crops, Pontecagnano, Italy
| | - Jaime Prohens
- Instituto de Conservación y Mejora de la Agrodiversidad Valenciana, Universitat Politècnica de València, Valencia, Spain
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Javed T, I I, Singhal RK, Shabbir R, Shah AN, Kumar P, Jinger D, Dharmappa PM, Shad MA, Saha D, Anuragi H, Adamski R, Siuta D. Recent Advances in Agronomic and Physio-Molecular Approaches for Improving Nitrogen Use Efficiency in Crop Plants. FRONTIERS IN PLANT SCIENCE 2022; 13:877544. [PMID: 35574130 PMCID: PMC9106419 DOI: 10.3389/fpls.2022.877544] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Accepted: 03/11/2022] [Indexed: 05/05/2023]
Abstract
The efficiency with which plants use nutrients to create biomass and/or grain is determined by the interaction of environmental and plant intrinsic factors. The major macronutrients, especially nitrogen (N), limit plant growth and development (1.5-2% of dry biomass) and have a direct impact on global food supply, fertilizer demand, and concern with environmental health. In the present time, the global consumption of N fertilizer is nearly 120 MT (million tons), and the N efficiency ranges from 25 to 50% of applied N. The dynamic range of ideal internal N concentrations is extremely large, necessitating stringent management to ensure that its requirements are met across various categories of developmental and environmental situations. Furthermore, approximately 60 percent of arable land is mineral deficient and/or mineral toxic around the world. The use of chemical fertilizers adds to the cost of production for the farmers and also increases environmental pollution. Therefore, the present study focused on the advancement in fertilizer approaches, comprising the use of biochar, zeolite, and customized nano and bio-fertilizers which had shown to be effective in improving nitrogen use efficiency (NUE) with lower soil degradation. Consequently, adopting precision farming, crop modeling, and the use of remote sensing technologies such as chlorophyll meters, leaf color charts, etc. assist in reducing the application of N fertilizer. This study also discussed the role of crucial plant attributes such as root structure architecture in improving the uptake and transport of N efficiency. The crosstalk of N with other soil nutrients plays a crucial role in nutrient homeostasis, which is also discussed thoroughly in this analysis. At the end, this review highlights the more efficient and accurate molecular strategies and techniques such as N transporters, transgenes, and omics, which are opening up intriguing possibilities for the detailed investigation of the molecular components that contribute to nitrogen utilization efficiency, thus expanding our knowledge of plant nutrition for future global food security.
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Affiliation(s)
- Talha Javed
- College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Department of Agronomy, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Indu I
- Indian Council of Agricultural Research (ICAR)-Indian Grassland and Fodder Research Institute, Jhansi, India
| | - Rajesh Kumar Singhal
- Indian Council of Agricultural Research (ICAR)-Indian Grassland and Fodder Research Institute, Jhansi, India
| | - Rubab Shabbir
- College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Department of Plant Breeding and Genetics, Seed Science and Technology, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Adnan Noor Shah
- Department of Agricultural Engineering, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan, Pakistan
| | - Pawan Kumar
- Indian Council of Agricultural Research (ICAR)-Central Institute for Arid Horticulture, Bikaner, India
| | - Dinesh Jinger
- Research Centre, Indian Council of Agricultural Research (ICAR)-Indian Institute of Soil and Water Conservation, Anand, India
| | - Prathibha M. Dharmappa
- Indian Council of Agricultural Research (ICAR)-Indian Institute of Horticultural Research, Bengaluru, India
| | - Munsif Ali Shad
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene, Hubei Hongshan Laboratory, Wuhan, China
| | - Debanjana Saha
- Centurion University of Technology and Management, Jatni, India
| | - Hirdayesh Anuragi
- Indian Council of Agricultural Research (ICAR)- Central Agroforestry Research Institute, Jhansi, India
| | - Robert Adamski
- Faculty of Process and Environmental Engineering, Łódź University of Technology, Łódź, Poland
| | - Dorota Siuta
- Faculty of Process and Environmental Engineering, Łódź University of Technology, Łódź, Poland
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Abstract
Drought and waterlogging seriously affect the growth of plants and are considered severe constraints on agricultural and forestry productivity; their frequency and degree have increased over time due to global climate change. The morphology, photosynthetic activity, antioxidant enzyme system and hormone levels of plants could change in response to water stress. The mechanisms of these changes are introduced in this review, along with research on key transcription factors and genes. Both drought and waterlogging stress similarly impact leaf morphology (such as wilting and crimping) and inhibit photosynthesis. The former affects the absorption and transportation mechanisms of plants, and the lack of water and nutrients inhibits the formation of chlorophyll, which leads to reduced photosynthetic capacity. Constitutive overexpression of 9-cis-epoxydioxygenase (NCED) and acetaldehyde dehydrogenase (ALDH), key enzymes in abscisic acid (ABA) biosynthesis, increases drought resistance. The latter forces leaf stomata to close in response to chemical signals, which are produced by the roots and transferred aboveground, affecting the absorption capacity of CO2, and reducing photosynthetic substrates. The root system produces adventitious roots and forms aerenchymal to adapt the stresses. Ethylene (ETH) is the main response hormone of plants to waterlogging stress, and is a member of the ERFVII subfamily, which includes response factors involved in hypoxia-induced gene expression, and responds to energy expenditure through anaerobic respiration. There are two potential adaptation mechanisms of plants (“static” or “escape”) through ETH-mediated gibberellin (GA) dynamic equilibrium to waterlogging stress in the present studies. Plant signal transduction pathways, after receiving stress stimulus signals as well as the regulatory mechanism of the subsequent synthesis of pyruvate decarboxylase (PDC) and alcohol dehydrogenase (ADH) enzymes to produce ethanol under a hypoxic environment caused by waterlogging, should be considered. This review provides a theoretical basis for plants to improve water stress tolerance and water-resistant breeding.
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Decouard B, Bailly M, Rigault M, Marmagne A, Arkoun M, Soulay F, Caïus J, Paysant-Le Roux C, Louahlia S, Jacquard C, Esmaeel Q, Chardon F, Masclaux-Daubresse C, Dellagi A. Genotypic Variation of Nitrogen Use Efficiency and Amino Acid Metabolism in Barley. FRONTIERS IN PLANT SCIENCE 2022; 12:807798. [PMID: 35185958 PMCID: PMC8854266 DOI: 10.3389/fpls.2021.807798] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Accepted: 12/02/2021] [Indexed: 06/01/2023]
Abstract
Owing to the large genetic diversity of barley and its resilience under harsh environments, this crop is of great value for agroecological transition and the need for reduction of nitrogen (N) fertilizers inputs. In the present work, we investigated the diversity of a North African barley genotype collection in terms of growth under limiting N (LN) or ample N (HN) supply and in terms of physiological traits including amino acid content in young seedlings. We identified a Moroccan variety, Laanaceur, accumulating five times more lysine in its leaves than the others under both N nutritional regimes. Physiological characterization of the barley collection showed the genetic diversity of barley adaptation strategies to LN and highlighted a genotype x environment interaction. In all genotypes, N limitation resulted in global biomass reduction, an increase in C concentration, and a higher resource allocation to the roots, indicating that this organ undergoes important adaptive metabolic activity. The most important diversity concerned leaf nitrogen use efficiency (LNUE), root nitrogen use efficiency (RNUE), root nitrogen uptake efficiency (RNUpE), and leaf nitrogen uptake efficiency (LNUpE). Using LNUE as a target trait reflecting barley capacity to deal with N limitation, this trait was positively correlated with plant nitrogen uptake efficiency (PNUpE) and RNUpE. Based on the LNUE trait, we determined three classes showing high, moderate, or low tolerance to N limitation. The transcriptomic approach showed that signaling, ionic transport, immunity, and stress response were the major functions affected by N supply. A candidate gene encoding the HvNRT2.10 transporter was commonly up-regulated under LN in the three barley genotypes investigated. Genes encoding key enzymes required for lysine biosynthesis in plants, dihydrodipicolinate synthase (DHPS) and the catabolic enzyme, the bifunctional Lys-ketoglutarate reductase/saccharopine dehydrogenase are up-regulated in Laanaceur and likely account for a hyperaccumulation of lysine in this genotype. Our work provides key physiological markers of North African barley response to low N availability in the early developmental stages.
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Affiliation(s)
- Bérengère Decouard
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - Marlène Bailly
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - Martine Rigault
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - Anne Marmagne
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - Mustapha Arkoun
- Agro Innovation International - Laboratoire Nutrition Végétale, TIMAC AGRO International SAS, Saint Malo, France
| | - Fabienne Soulay
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - José Caïus
- Université Paris-Saclay, CNRS, INRAE, University of Évry Val d′Essonne, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
- Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
| | - Christine Paysant-Le Roux
- Université Paris-Saclay, CNRS, INRAE, University of Évry Val d′Essonne, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
- Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France
| | - Said Louahlia
- Natural Resources and Environment Lab, Faculté Polydiscipliniare de Taza, Université Sidi Mohamed Ben Abdellah, Taza, Morocco
| | - Cédric Jacquard
- Université de Reims Champagne Ardenne, RIBP EA 4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, Reims, France
| | - Qassim Esmaeel
- Université de Reims Champagne Ardenne, RIBP EA 4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, Reims, France
| | - Fabien Chardon
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - Céline Masclaux-Daubresse
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
| | - Alia Dellagi
- Université Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), Versailles, France
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High NH4+/NO3− Ratio Inhibits the Growth and Nitrogen Uptake of Chinese Kale at the Late Growth Stage by Ammonia Toxicity. HORTICULTURAE 2021. [DOI: 10.3390/horticulturae8010008] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The aim of this study was to determine the effects of various NH4+/NO3− ratios in a nutrient solution on the growth and nitrogen uptake of Chinese kale under hydroponic conditions. The four NH4+/NO3− ratios in the nutrient solution were CK (0/100), T1 (10/90), T2 (25/75), and T3 (50/50). An appropriate NH4+/NO3− ratio (10/90, 25/75) promoted the growth of Chinese kale. T2 produced the highest fresh and dry weight among treatments, and all indices of seedling root growth were the highest under T2. A high NH4+/NO3− ratio (50/50) promoted the growth of Chinese kale seedlings at the early stage but inhibited growth at the late growth stage. At harvest, the nutrient solution showed acidity. The pH value was the lowest in T3, whereas NH4+ and NH4+/NO3− ratios were the highest, which caused ammonium toxicity. Total N accumulation and N use efficiency were the highest in T2, and total N accumulation was the lowest in T3. Principal component analysis showed that T2 considerably promoted growth and N absorption of Chinese kale, whereas T3 had a remarkable effect on the pH value. These findings suggest that an appropriate increase in NH4+ promotes the growth and nutrient uptake of Chinese kale by maintaining the pH value and NH4+/NO3− ratios of the nutrient solution, whereas excessive addition of NH4+ may induce rhizosphere acidification and ammonia toxicity, inhibiting plant growth.
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Islam MQ, Hasan MN, Hoque H, Jewel NA, Bhuiyan MFH, Prodhan SH. Characterization of transcription factor MYB59 and expression profiling in response to low K + and NO 3- in indica rice (Oryza sativa L.). J Genet Eng Biotechnol 2021; 19:167. [PMID: 34704216 PMCID: PMC8548439 DOI: 10.1186/s43141-021-00248-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Accepted: 09/18/2021] [Indexed: 11/11/2022]
Abstract
Background Nitrogen and potassium are crucial supplements for plant development and growth. Plants can detect potassium and nitrate ions in soils and in like way, they modify root-to-shoot transport of these ions to adjust the conveyance among roots and shoots. Transcription factor MYB59 plays essential roles in numerous physiological processes inclusive of hormone response, abiotic stress tolerance, plant development, and metabolic regulation. In this study, we retrieved 56 MYB59 proteins from different plant species. Multiple sequence alignment, phylogenetic tree, conserved motif, chromosomal localization, and cis-regulatory elements of the retrieved sequences were analyzed. Gene structure, protein 3D structure, and DNA binding of OsMYB59 indica were also predicted. Finally, we characterized OsMYB59 and its function under low K+/NO3− conditions in Oryza sativa subsp. indica. Results Data analysis showed that MYB59s from various groups separated in terms of conserved functional domains and gene structure, where members of genus Oryza clustered together. Plants showed reduced height and yellowish appearance when grown on K+ and NO3− deficient medium. Quantitative real-time PCR uncovered that the OsMYB59 reacted to abiotic stresses where its expression was increased in BRRI dhan56 but decreased in other varieties on K+ deficient medium. In addition, OsMYB59 transcript level increased on NO3− deficient medium. Conclusions Our results can help to explain the biological functions of indica rice MYB59 protein and gave a theoretical premise to additionally describe its biological roles in response to abiotic stresses particularly drought. Supplementary Information The online version contains supplementary material available at 10.1186/s43141-021-00248-6.
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Affiliation(s)
- Md Qamrul Islam
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh
| | - Md Nazmul Hasan
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh
| | - Hammadul Hoque
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh
| | - Nurnabi Azad Jewel
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh
| | - Md Fahmid Hossain Bhuiyan
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh
| | - Shamsul H Prodhan
- Department of Genetic Engineering and Biotechnology, Shahjalal University of Science and Technology, Sylhet, 3114, Bangladesh.
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Poudel M, Mendes R, Costa LAS, Bueno CG, Meng Y, Folimonova SY, Garrett KA, Martins SJ. The Role of Plant-Associated Bacteria, Fungi, and Viruses in Drought Stress Mitigation. Front Microbiol 2021; 12:743512. [PMID: 34759901 PMCID: PMC8573356 DOI: 10.3389/fmicb.2021.743512] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Accepted: 09/20/2021] [Indexed: 11/29/2022] Open
Abstract
Drought stress is an alarming constraint to plant growth, development, and productivity worldwide. However, plant-associated bacteria, fungi, and viruses can enhance stress resistance and cope with the negative impacts of drought through the induction of various mechanisms, which involve plant biochemical and physiological changes. These mechanisms include osmotic adjustment, antioxidant enzyme enhancement, modification in phytohormonal levels, biofilm production, increased water and nutrient uptake as well as increased gas exchange and water use efficiency. Production of microbial volatile organic compounds (mVOCs) and induction of stress-responsive genes by microbes also play a crucial role in the acquisition of drought tolerance. This review offers a unique exploration of the role of plant-associated microorganisms-plant growth promoting rhizobacteria and mycorrhizae, viruses, and their interactions-in the plant microbiome (or phytobiome) as a whole and their modes of action that mitigate plant drought stress.
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Affiliation(s)
- Mousami Poudel
- Department of Plant Pathology, University of Florida, Gainesville, FL, United States
| | - Rodrigo Mendes
- Laboratory of Environmental Microbiology, Embrapa Environment, Brazilian Agricultural Research Corporation, Brasília, Brazil
| | - Lilian A. S. Costa
- Laboratory of Environmental Microbiology, Embrapa Environment, Brazilian Agricultural Research Corporation, Brasília, Brazil
| | - C. Guillermo Bueno
- Institute of Ecology and Earth Sciences, Faculty of Science and Technology, University of Tartu, Tartu, Estonia
| | - Yiming Meng
- Institute of Ecology and Earth Sciences, Faculty of Science and Technology, University of Tartu, Tartu, Estonia
| | | | - Karen A. Garrett
- Department of Plant Pathology, University of Florida, Gainesville, FL, United States
- Food Systems Institute, University of Florida, Gainesville, FL, United States
| | - Samuel J. Martins
- Department of Plant Pathology, University of Florida, Gainesville, FL, United States
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Xing H, Zhou W, Wang C, Li L, Li X, Cui N, Hao W, Liu F, Wang Y. Excessive nitrogen application under moderate soil water deficit decreases photosynthesis, respiration, carbon gain and water use efficiency of maize. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 166:1065-1075. [PMID: 34293606 DOI: 10.1016/j.plaphy.2021.07.014] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 06/20/2021] [Accepted: 07/12/2021] [Indexed: 05/25/2023]
Abstract
The impact of water stress and nitrogen (N) nutrition on leaf respiration (R), carbon balance and water use efficiency (WUE) remains largely elusive. Therefore, the objective of the present study was to investigate the effect of soil water and N stresses on growth, physiological responses, leaf structure, carbon gain and WUE of maize. The plants were subjected to different soil water and N regimes to maturity. The results showed that the photosynthesis (An) and stomatal conductance (Gs) decreased significantly under the water stressed treatments across the N treatments mainly ascribed to the decreased plant water status. The moderate water stress reduced the photosynthetic capacity and activity and also caused damage to the structure of leaves, resulting in the significant reduction of An, and thus decreased WUEi. The dark respiration (Rd) was significantly decreased due to the damage of mitochondria, however, the Rd/An increased significantly and the carbon gain was seriously compromised, eventually inhibiting biomass growth under the moderately water stressed treatment. Increasing N dose further aggravated the severity of water deficit, decreased An, Gs and WUEi, damaged the structure and reduced the number of mitochondria of leaves, while increased Rd/An considerably under moderate water stress. Consequently, the biomass accumulation, carbon gain and plant level WUEp in the moderately water stressed treatment decreased markedly under the high N supply. Therefore, excessive N application should be avoided when plants suffer soil water stress in maize production.
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Affiliation(s)
- Huanli Xing
- State Engineering Laboratory of Efficient Water Use of Crops and Disaster Loss Mitigation, Key Laboratory of Dryland Agriculture, Ministry of Agriculture and Rural Affairs of China, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Wenbin Zhou
- Key Laboratory of Crop Physiology and Ecology, Ministry of Agriculture and Rural Affairs of China, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Chao Wang
- State Engineering Laboratory of Efficient Water Use of Crops and Disaster Loss Mitigation, Key Laboratory of Dryland Agriculture, Ministry of Agriculture and Rural Affairs of China, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Li Li
- State Engineering Laboratory of Efficient Water Use of Crops and Disaster Loss Mitigation, Key Laboratory of Dryland Agriculture, Ministry of Agriculture and Rural Affairs of China, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xiangnan Li
- Key Laboratory of Mollisols Agroecology, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, China
| | - Ningbo Cui
- State Key Laboratory of Hydraulics and Mountain River Engineering, College of Water Resource and Hydropower, Sichuan University, Chengdu, China
| | - Weiping Hao
- State Engineering Laboratory of Efficient Water Use of Crops and Disaster Loss Mitigation, Key Laboratory of Dryland Agriculture, Ministry of Agriculture and Rural Affairs of China, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Fulai Liu
- Department of Plant and Environmental Sciences, University of Copenhagen, Taastrup, Denmark
| | - Yaosheng Wang
- State Engineering Laboratory of Efficient Water Use of Crops and Disaster Loss Mitigation, Key Laboratory of Dryland Agriculture, Ministry of Agriculture and Rural Affairs of China, Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China.
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35
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Hamzelou S, Melino VJ, Plett DC, Kamath KS, Nawrocki A, Larsen MR, Atwell BJ, Haynes PA. The phosphoproteome of rice leaves responds to water and nitrogen supply. Mol Omics 2021; 17:706-718. [PMID: 34291261 DOI: 10.1039/d1mo00137j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The scarcity of freshwater is an increasing concern in flood-irrigated rice, whilst excessive use of nitrogen fertilizers is costly and contributes to environmental pollution. To co-ordinate growth adaptation under prolonged exposure to limited water or excess nitrogen supply, plants employ complex systems for signalling and regulation of metabolic processes. There is limited information on the involvement of one of the most important post-translational modifications (PTMs), protein phosphorylation, in plant adaptation to long-term changes in resource supply. Oryza sativa cv. Nipponbare was grown under two regimes of nitrogen from the time of germination to final harvest. Twenty-five days after germination, water was withheld from half the pots in each nitrogen treatment and low water supply continued for an additional 26 days, while the remaining pots were well watered. Leaves from all four groups of plants were harvested after 51 days in order to test whether phosphorylation of leaf proteins responded to prior abiotic stress events. The dominant impact of these resources is exerted in leaves, where PTMs have been predicted to occur. Proteins were extracted and phosphopeptides were analysed by nanoLC-MS/MS analysis, coupled with label-free quantitation. Water and nitrogen regimes triggered extensive changes in phosphorylation of proteins involved in membrane transport, such as the aquaporin OsPIP2-6, a water channel protein. Our study reveals phosphorylation of several peptides belonging to proteins involved in RNA-processing and carbohydrate metabolism, suggesting that phosphorylation events regulate the signalling cascades that are required to optimize plant response to resource supply.
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Affiliation(s)
- Sara Hamzelou
- Department of Molecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia.
| | - Vanessa J Melino
- King Abdullah University for Science and Technology, 2955-6990, Kingdom of Saudi Arabia
| | - Darren C Plett
- The Plant Accelerator, Australian Plant Phenomics Facility, The University of Adelaide, PMB 1, Glen Osmond, SA 5064, Australia
| | - Karthik Shantharam Kamath
- Department of Molecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia. and Australian Proteome Analysis Facility, Macquarie University, North Ryde, NSW 2109, Australia
| | - Arkadiusz Nawrocki
- Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, DK 5230 Odense M, Denmark
| | - Martin R Larsen
- Department of Biochemistry and Molecular Biology, University of Southern Denmark, Campusvej 55, DK 5230 Odense M, Denmark
| | - Brian J Atwell
- Department of Biological Sciences, Macquarie University, North Ryde, NSW 2109, Australia
| | - Paul A Haynes
- Department of Molecular Sciences, Macquarie University, North Ryde, NSW 2109, Australia.
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Ovrutska I. Aquaporins in regulation of plant protective responses to drought. UKRAINIAN BOTANICAL JOURNAL 2021. [DOI: 10.15407/ukrbotj78.03.221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Plasmolemma permeability is an integral indicator of the functional state of plant cells under stress. Aquaporins (AQPs), specialized transmembrane proteins that form water channels and play an important role in the adaptation of plants to adverse conditions and, in particular, to lack or excess of water, are involved in the formation of the response to drought. The main function of AQPs is to facilitate the movement of water across cell membranes and maintain aqueous cell homeostasis. Under stressful conditions, there is both an increase and decrease in the expression of individual aquaporin genes. Analysis of the data revealed differences in the expression of AQPs genes in stable and sensitive plant genotypes. It turned out that aquaporins in different stress-resistant varieties of the same species also respond differently to drought. The review provides brief information on the history of the discovery of aquaporins, the structure and function of these proteins, summarizes the latest information on the role of aquaporins in the regulation of metabolism and the response of plants to stressors, with particular emphasis on aquaporins in drought protection. The discovery and study of AQPs expands the possibilities of using genetic engineering methods for the selection of new plant species, in particular, more resistant to drought and salinization of the soil, as well as to increase their productivity. The use of aquaporins in biotechnology to improve drought resistance of various species has many prospects.
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Abdou NM, Abdel-Razek MA, Abd El-Mageed SA, Semida WM, Leilah AAA, Abd El-Mageed TAA, Ali EF, Majrashi A, Rady MOA. High Nitrogen Fertilization Modulates Morpho-Physiological Responses, Yield, and Water Productivity of Lowland Rice under Deficit Irrigation. AGRONOMY 2021; 11:1291. [DOI: 10.3390/agronomy11071291] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
Sustainability of rice production under flooding conditions has been challenged by water shortage and food demand. Applying higher nitrogen fertilization could be a practical solution to alleviate the deleterious effects of water stress on lowland rice (Oryza sativa L.) in semi-arid conditions. For this purpose, field experiments were conducted during the summer of 2017 and 2018 seasons. These trials were conducted as split-split based on randomized complete blocks design with soil moisture regimes at three levels (120, 100 and 80% of crop evapotranspiration (ETc), nitrogen fertilizers at two levels (N1—165 and N2—200 kg N ha−1) and three lowland Egyptian rice varieties [V1 (Giza178), V2 (Giza177) and V3 (Sakha104)] using three replications. For all varieties, growth (plant height, tillers No, effective tillers no), water status ((relative water content RWC, and membrane stability index, MSI), physiological responses (chlorophyll fluorescence, Relative chlorophyll content (SPAD), and yield were significantly increased with higher addition of nitrogen fertilizer under all water regimes. Variety V1 produced the highest grain yield compared to other varieties and the increases were 38% and 15% compared with V2 and V3, respectively. Increasing nitrogen up to 200 kg N ha−1 (N2) resulted in an increase in grain and straw yields by 12.7 and 18.2%, respectively, compared with N1. The highest irrigation water productivity (IWP) was recorded under I2 (0.89 kg m−3) compared to (0.83 kg m−3) and (0.82 kg m−3) for I1 and I3, respectively. Therefore, the new applied agro-management practice (deficit irrigation and higher nitrogen fertilizer) effectively saved irrigation water input by 50–60% when compared with the traditional cultivation method (flooding system). Hence, the new proposed innovative method for rice cultivation could be a promising strategy for enhancing the sustainability of rice production under water shortage conditions.
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Sevanthi AM, Sinha SK, V S, Rani M, Saini MR, Kumari S, Kaushik M, Prakash C, K V, Singh GP, Mohapatra T, Mandal PK. Integration of Dual Stress Transcriptomes and Major QTLs from a Pair of Genotypes Contrasting for Drought and Chronic Nitrogen Starvation Identifies Key Stress Responsive Genes in Rice. RICE (NEW YORK, N.Y.) 2021; 14:49. [PMID: 34089405 PMCID: PMC8179884 DOI: 10.1186/s12284-021-00487-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/03/2020] [Accepted: 05/05/2021] [Indexed: 05/19/2023]
Abstract
We report here the genome-wide changes resulting from low N (N-W+), low water (N+W-)) and dual stresses (N-W-) in root and shoot tissues of two rice genotypes, namely, IR 64 (IR64) and Nagina 22 (N22), and their association with the QTLs for nitrogen use efficiency. For all the root parameters, except for root length under N-W+, N22 performed better than IR64. Chlorophyll a, b and carotenoid content were higher in IR64 under N+W+ treatment and N-W+ and N+W- stresses; however, under dual stress, N22 had higher chlorophyll b content. While nitrite reductase, glutamate synthase (GS) and citrate synthase assays showed better specific activity in IR64, glutamate dehydrogenase showed better specific activity in N22 under dual stress (N-W-); the other N and C assimilating enzymes showed similar but low specific activities in both the genotypes. A total of 8926 differentially expressed genes (DEGs) were identified compared to optimal (N+W+) condition from across all treatments. While 1174, 698 and 903 DEGs in IR64 roots and 1197, 187 and 781 in N22 roots were identified, nearly double the number of DEGs were found in the shoot tissues; 3357, 1006 and 4005 in IR64 and 4004, 990 and 2143 in N22, under N-W+, N+W- and N-W- treatments, respectively. IR64 and N22 showed differential expression in 15 and 11 N-transporter genes respectively, under one or more stress treatments, out of which four showed differential expression also in N+W- condition. The negative regulators of N- stress, e.g., NIGT1, OsACTPK1 and OsBT were downregulated in IR64 while in N22, OsBT was not downregulated. Overall, N22 performed better under dual stress conditions owing to its better root architecture, chlorophyll and porphyrin synthesis and oxidative stress management. We identified 12 QTLs for seed and straw N content using 253 recombinant inbred lines derived from IR64 and N22 and a 5K SNP array. The QTL hotspot region on chromosome 6 comprised of 61 genes, of which, five were DEGs encoding for UDP-glucuronosyltransferase, serine threonine kinase, anthocyanidin 3-O-glucosyltransferase, and nitrate induced proteins. The DEGs, QTLs and candidate genes reported in this study can serve as a major resource for both rice improvement and functional biology.
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Affiliation(s)
| | - Subodh Kumar Sinha
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Sureshkumar V
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Manju Rani
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Manish Ranjan Saini
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Sapna Kumari
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Megha Kaushik
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Chandra Prakash
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
| | - Venkatesh K
- ICAR-Indian Institute of Wheat and Barley Research, Karnal, 132001, India
| | - G P Singh
- ICAR-Indian Institute of Wheat and Barley Research, Karnal, 132001, India
| | - Trilochan Mohapatra
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India
- Indian Council of Agricultural Research, Krishi Bhavan, New Delhi, 110001, India
| | - Pranab Kumar Mandal
- ICAR-National Institute for Plant Biotechnology, Pusa Campus, New Delhi, 110012, India.
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Zhang T, Liang X, Ye Q, BassiriRad H, Liu H, He P, Wu G, Lu X, Mo J, Cai X, Rao X, Yan J, Fu S. Leaf hydraulic acclimation to nitrogen addition of two dominant tree species in a subtropical forest. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 771:145415. [PMID: 33736159 DOI: 10.1016/j.scitotenv.2021.145415] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2020] [Revised: 01/15/2021] [Accepted: 01/21/2021] [Indexed: 06/12/2023]
Abstract
Plant hydraulic traits have been shown to be sensitive to changes in nitrogen (N) availability in short-term studies largely using seedlings or saplings. The extent and the magnitude of N-sensitivity of the field grown mature trees in long-term experiments, however, are relatively unknown. Here, we investigated responses of leaf water relations and morphological and anatomical traits of two dominant tree species (Castanopsis chinensis and Schima superba) to a six-year canopy N addition in a subtropical forest. We found that N addition increased leaf hydraulic conductivity in both species along with higher transpiration rate and less negative water potential at 50% loss of leaf hydraulic conductivity and at leaf turgor loss point. Examination of leaf morphological and anatomical traits revealed that increased leaf hydraulic efficiency was at least in part due to increased vessel diameter which also compromised the hydraulic safety under increased water stress. Moreover, reduced vessel reinforcement and increased thickness shrinkage index further interpreted the increases in leaf hydraulic vulnerability under N addition. Our results demonstrated that N deposition may lead to increases of plant water loss to the atmosphere as well as tree vulnerability to drought.
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Affiliation(s)
- Tong Zhang
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Xingyun Liang
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Qing Ye
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China; College of Life Sciences, Gannan Normal University, Ganzhou 341000, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Haibin Road 1119, Nansha, Guangzhou 511458, China.
| | - Hormoz BassiriRad
- Department of Biological Sciences, University of Illinois at Chicago, 845 W. Taylor St., Chicago 60607, IL, USA
| | - Hui Liu
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Pengcheng He
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Guilin Wu
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Xiankai Lu
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Jiangming Mo
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Xi'an Cai
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Xingquan Rao
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Junhua Yan
- Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems, Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Xingke Road 723, Guangzhou 510650, China
| | - Shenglei Fu
- College of Environment and Planning, Henan University, Jinming Avenue, Kaifeng 475004, China
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Comparative Transcriptome Analysis of Sophora japonica (L.) Roots Reveals Key Pathways and Genes in Response to PEG-Induced Drought Stress under Different Nitrogen Conditions. FORESTS 2021. [DOI: 10.3390/f12050650] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Sophora japonica is a native leguminous tree species in China. The high stress tolerance contributes to its long lifespan of thousands of years. The lack of genomic resources greatly limits genetic studies on the stress responses of S. japonica. In this study, RNA-seq was conducted for S. japonica roots grown under short-term 20% polyethylene glycol (PEG) 6000-induced drought stress under normal N and N starvation conditions (1 and 0 mM NH4NO3, respectively). In each of the libraries, we generated more than 25 million clean reads, which were then de novo assembled to 46,852 unigenes with an average length of 1310.49 bp. In the differential expression analyses, more differentially expressed genes (DEGs) were found under drought with N starvation than under single stresses. The number of transcripts identified under N starvation and drought in S. japonica was nearly the same, but more upregulated genes were induced by drought, while more downregulated genes were induced by N starvation. Genes involved in “phenylpropanoid biosynthesis” and “biosynthesis of amino acids” pathways were upregulated according to KEGG enrichment analyses, irrespective of the stress treatments. Additionally, upregulated N metabolism genes were enriched upon drought, and downregulated photosynthesis genes were enriched under N starvation. We found 4,372 and 5,430 drought-responsive DEGs under normal N and N starvation conditions, respectively. N starvation may aggravate drought by downregulating transcripts in the “carbon metabolism”, “ribosome”, “arginine biosynthesis pathway”, “oxidative phosphorylation” and “aminoacyl-tRNA biosynthesis” pathways. We identified 78 genes related to N uptake and assimilation, 38 of which exhibited differential expression under stress. A total of 395 DEGs were categorized as transcription factors, of which AR2/ERF-ERF, WRKY, NAC, MYB, bHLH, C3H and C2C2-Dof families played key roles in drought and N starvation stresses. The transcriptome data obtained, and the genes identified facilitate our understanding of the mechanisms of S. japonica responses to drought and N starvation stresses and provide a molecular foundation for understanding the mechanisms of its long lifespan for breeding resistant varieties for greening.
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Zhu Y, Qi B, Hao Y, Liu H, Sun G, Chen R, Song S. Appropriate NH 4 +/NO 3 - Ratio Triggers Plant Growth and Nutrient Uptake of Flowering Chinese Cabbage by Optimizing the pH Value of Nutrient Solution. FRONTIERS IN PLANT SCIENCE 2021; 12:656144. [PMID: 33995453 PMCID: PMC8121088 DOI: 10.3389/fpls.2021.656144] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Accepted: 03/31/2021] [Indexed: 06/12/2023]
Abstract
Compared with sole nitrogen (N), the nutrition mixture of ammonium (NH4 +) and nitrate (NO3 -) is known to better improve crop yield and quality. However, the mechanism underlying this improvement remains unclear. In the present study, we analyzed the changes in nutrient solution composition, content of different N forms in plant tissues and exudates, and expression of plasma membrane (PM) H+-ATPase genes (HAs) under different NH4 +/NO3 - ratios (0/100, 10/90, 25/75, 50/50 as control, T1, T2, and T3) in flowering Chinese cabbage. We observed that compared with the control, T1 and T2 increased the economical yield of flowering Chinese cabbage by 1.26- and 1.54-fold, respectively, whereas T3 significantly reduced plant yield. Compared with the control, T1-T3 significantly reduced the NO3 - content and increased the NH4 +, amino acid, and soluble protein contents of flowering Chinese cabbage to varying extents. T2 significantly increased the N use efficiency (NUE), whereas T3 significantly decreased it to only being 70.25% of that of the control. Owing to the difference in N absorption and utilization among seedlings, the pH value of the nutrient solution differed under different NH4 +/NO3 - ratios. At harvest, the pH value of T2 was 5.8; in the control and T1, it was approximately 8.0, and in T3 it was only 3.6. We speculated that appropriate NH4 +/NO3 - ratios may improve N absorption and assimilation and thus promote the growth of flowering Chinese cabbage, owing to the suitable pH value. On the contrary, addition of excessive NH4 + may induce rhizosphere acidification and ammonia toxicity, causing plant growth inhibition. We further analyzed the transcription of PM H+-ATPase genes (HAs). HA1 and HA7 transcription in roots was significantly down-regulated by the addition of the mixture of NH4 + and NO3 -, whereas the transcription of HA2, HA9 in roots and HA7, HA8, and HA10 in leaves was sharply up-regulated by the addition of the mixture; the transcription of HA3 was mainly enhanced by the highest ratio of NH4 +/NO3 -. Our results provide valuable information about the effects of treatments with different NH4 +/NO3 - ratios on plant growth and N uptake and utilization.
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Affiliation(s)
- Yunna Zhu
- College of Horticulture, South China Agricultural University, Guangzhou, China
- Henry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan, China
| | - Baifu Qi
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Yanwei Hao
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Houcheng Liu
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Guangwen Sun
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Riyuan Chen
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Shiwei Song
- College of Horticulture, South China Agricultural University, Guangzhou, China
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Abd El-Gawad HG, Mukherjee S, Farag R, Abd Elbar OH, Hikal M, Abou El-Yazied A, Abd Elhady SA, Helal N, ElKelish A, El Nahhas N, Azab E, Ismail IA, Mbarki S, Ibrahim MFM. Exogenous γ-aminobutyric acid (GABA)-induced signaling events and field performance associated with mitigation of drought stress in Phaseolus vulgaris L. PLANT SIGNALING & BEHAVIOR 2021; 16:1853384. [PMID: 33356834 PMCID: PMC7849733 DOI: 10.1080/15592324.2020.1853384] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Not much information is available to substantiate the possible role of γ -aminobutyric acid (GABA) signaling in mitigating water-deficit stress in snap bean (Phaseolus vulgaris L.) plants under semiarid conditions. Present work aims to investigate the role of exogenous GABA (foliar application; 0.5, 1 and 2 mM) in amelioration of drought stress and improvement of field performance on snap bean plants raised under two drip irrigation regimes (100% and 70% of water requirements). Water stress led to significant reduction in plant growth, leaf relative water content (RWC), cell membrane stability index (CMSI), nutrient uptake (N, P, K, Ca, Fe and Zn), pod yield and its content from protein and total soluble solids (TSS). Meanwhile, lipid peroxidation (malondialdehyde content- MDA), osmolyte content (free amino acids- FAA, proline, soluble sugars) antioxidative defense (activity of superoxide dismutase- SOD, catalase- CAT, peroxidase- POX and ascorbate peroxidase- APX) and the pod fiber content exhibited significantly increase due to water stress. Exogenous GABA application (especially at 2 mM) revealed partial normalization of the effects of drought stress in snap bean plants. GABA-induced mitigation of drought stress was manifested by improvement in growth, water status, membrane integrity, osmotic adjustment, antioxidant defense and nutrient acquisition. Furthermore, GABA application during water stress in snap bean plants resulted in improvement of field performance being manifested by increased pod yield and its quality attributes. To sum up, exogenous GABA appears to function as an effective priming molecule to alleviate drought stress in snap bean plants under semiarid conditions.
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Affiliation(s)
- Hany G. Abd El-Gawad
- Department of Horticulture, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Soumya Mukherjee
- , Department of Botany, Jangipur College, University of Kalyani, West Bengal, India
- CONTACT Soumya Mukherjee Department of Botany, Jangipur College (University of Kalyani), Chota Kalia, Jangipur, District Murshidabad West Bengal 742213, India
| | - Reham Farag
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Ola H. Abd Elbar
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Mohamed Hikal
- Department of Biochemistry, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Ahmed Abou El-Yazied
- Department of Horticulture, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Salama A. Abd Elhady
- Department of Horticulture, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Nesreen Helal
- Department of Horticulture, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
| | - Amr ElKelish
- Botany Department, Faculty of Science, Suez Canal University, Ismailia, Egypt
| | - Nihal El Nahhas
- Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria, Egypt
| | - Ehab Azab
- Department of Biotechnology, College of Science, Taif University, Saudi Arabia
- Botany and Microbiology Department, Faculty of Science, Zagazig University, Zagazig, Sharkia, Egypt
| | - Ismail A. Ismail
- Department of Biology, College of Science, Taif University, Saudi Arabia
- Agricultural Genetic Engineering Research Institute, Agricultural Research Center, Giza, Egypt
| | - Sonia Mbarki
- Laboratory of Valorisation of Unconventional Waters, National Institute of Research in Rural Engineering, Water and Forests(INRGREF), Ariana, Tunisia
| | - Mohamed F. M. Ibrahim
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo, Egypt
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Lu Z, Ren T, Li J, Hu W, Zhang J, Yan J, Li X, Cong R, Guo S, Lu J. Nutrition-mediated cell and tissue-level anatomy triggers the covariation of leaf photosynthesis and leaf mass per area. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:6524-6537. [PMID: 32725164 DOI: 10.1093/jxb/eraa356] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 07/22/2020] [Indexed: 06/11/2023]
Abstract
Plants in nutrient-poor habitats converge towards lower rates of leaf net CO2 assimilation (Aarea); however, they display variability in leaf mass investment per area (LMA). How a plant optimizes its leaf internal carbon investment may have knock-on effects on structural traits and, in turn, affect leaf carbon fixation. Quantitative models were applied to evaluate the structural causes of variations in LMA and their relevance to Aarea in rapeseed (Brassica napus) based on their responses to nitrogen (N), phosphorus (P), potassium (K), and boron (B) deficiencies. Leaf carbon fixation decreased in response to nutrient deficiency, but the photosynthetic limitations varied greatly depending on the deficient nutrient. In comparison with Aarea, the LMA exhibited diverse responses, being increased under P or B deficiency, decreased under K deficiency, and unaffected under N deficiency. These variations were due to changes in cell- and tissue-level carbon investments between cell dry mass density (N or K deficiency) and cellular anatomy, including cell dimension and number (P deficiency), or both (B deficiency). However, there was a conserved pattern independent of nutrient-specific limitations-low nutrient availability reduced leaf carbon fixation but increased carbon investment in non-photosynthetic structures, resulting in larger but fewer mesophyll cells with a thicker cell wall but a lower chloroplast surface area appressed to the intercellular airspace, which reduced the mesophyll conductance and feedback-limited Aarea. Our results provide insight into the importance of mineral nutrients in balancing the leaf carbon economy by coordinating leaf carbon assimilation and internal distribution.
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Affiliation(s)
- Zhifeng Lu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Tao Ren
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Jing Li
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Wenshi Hu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Jianglin Zhang
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Jinyao Yan
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Xiaokun Li
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Rihuan Cong
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
| | - Shiwei Guo
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Nanjing Agricultural University, Nanjing, China
| | - Jianwei Lu
- Microelement Research Center, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture and Rural Affairs, Wuhan, China
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Zia R, Nawaz MS, Siddique MJ, Hakim S, Imran A. Plant survival under drought stress: Implications, adaptive responses, and integrated rhizosphere management strategy for stress mitigation. Microbiol Res 2020; 242:126626. [PMID: 33189069 DOI: 10.1016/j.micres.2020.126626] [Citation(s) in RCA: 94] [Impact Index Per Article: 23.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Revised: 10/06/2020] [Accepted: 10/10/2020] [Indexed: 12/25/2022]
Abstract
In many regions of the world, the incidence and extent of drought spells are predicted to increase which will create considerable pressure on global agricultural yields. Most likely among all the abiotic stresses, drought has the strongest effect on soil biota and plants along with complex environmental effects on other ecological systems. Plants being sessile appears the least resilient where drought creates osmotic stress, limits nutrient mobility due to soil heterogeneity, and reduces nutrient access to plant roots. Drought tolerance is a complex quantitative trait controlled by many genes and is one of the difficult traits to study and characterize. Nevertheless, existing studies on drought have indicated the mechanisms of drought resistance in plants on the morphological, physiological, and molecular basis and strategies have been devised to cope with the drought stress such as mass screening, breeding, marker-assisted selection, exogenous application of hormones or osmoprotectants and or engineering for drought resistance. These strategies have largely ignored the role of the rhizosphere in the plant's drought response. Studies have shown that soil microbes have a substantial role in modulation of plant response towards biotic and abiotic stress including drought. This response is complex and involves alteration in host root system architecture through hormones, osmoregulation, signaling through reactive oxygen species (ROS), induction of systemic tolerance (IST), production of large chain extracellular polysaccharides (EPS), and transcriptional regulation of host stress response genes. This review focuses on the integrated rhizosphere management strategy for drought stress mitigation in plants with a special focus on rhizosphere management. This combinatorial approach may include rhizosphere engineering by addition of drought-tolerant bacteria, nanoparticles, liquid nano clay (LNC), nutrients, organic matter, along with plant-modification with next-generation genome editing tool (e.g., CRISPR/Cas9) for quickly addressing emerging challenges in agriculture. Furthermore, large volumes of rainwater and wastewater generated daily can be smartly recycled and reused for agriculture. Farmers and other stakeholders will get a proper knowledge-exchange and an ideal road map to utilize available technologies effectively and to translate the measures into successful plant-water stress management. The proposed approach is cost-effective, eco-friendly, user-friendly, and will impart long-lasting benefits on agriculture and ecosystem and reduce vulnerability to climate change.
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Affiliation(s)
- Rabisa Zia
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P.O. Box 577 Jhang Road, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan
| | - Muhammad Shoib Nawaz
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P.O. Box 577 Jhang Road, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan
| | - Muhammad Jawad Siddique
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P.O. Box 577 Jhang Road, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan
| | - Sughra Hakim
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P.O. Box 577 Jhang Road, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan
| | - Asma Imran
- National Institute for Biotechnology and Genetic Engineering (NIBGE), P.O. Box 577 Jhang Road, Faisalabad, Pakistan.
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Bárzana G, Carvajal M. Genetic regulation of water and nutrient transport in water stress tolerance in roots. J Biotechnol 2020; 324:134-142. [PMID: 33038476 DOI: 10.1016/j.jbiotec.2020.10.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 07/29/2020] [Accepted: 10/05/2020] [Indexed: 01/11/2023]
Abstract
Drought stress is one of the major abiotic factors affecting the growth and development of crops. The primary effect of drought is the alteration of water and nutrient uptake and transport by roots, related essentially with aquaporins and ion transporters of the plasma membrane. Therefore, the efficiency of water and nutrient transport across cell layers is a main factor in tolerance mechanisms. The regulation of this transport under water stress - in relation to the differing degrees of tolerance of crops and the effect of arbuscular mycorrhizae, together with signaling mechanisms - is reviewed here. Three different phases in the response to stress (immediate, short-term and long-term), involving different signals and levels of gene regulation, are highlighted.
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Affiliation(s)
- Gloria Bárzana
- Aquaporins Group, Centro de Edafologia y Biologia Aplicada del Segura, CEBAS-CSIC, Campus Universitario de Espinardo - 25, E-30100, Murcia, Spain
| | - Micaela Carvajal
- Aquaporins Group, Centro de Edafologia y Biologia Aplicada del Segura, CEBAS-CSIC, Campus Universitario de Espinardo - 25, E-30100, Murcia, Spain.
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Smith S, Zhu S, Joos L, Roberts I, Nikonorova N, Vu LD, Stes E, Cho H, Larrieu A, Xuan W, Goodall B, van de Cotte B, Waite JM, Rigal A, Ramans Harborough S, Persiau G, Vanneste S, Kirschner GK, Vandermarliere E, Martens L, Stahl Y, Audenaert D, Friml J, Felix G, Simon R, Bennett MJ, Bishopp A, De Jaeger G, Ljung K, Kepinski S, Robert S, Nemhauser J, Hwang I, Gevaert K, Beeckman T, De Smet I. The CEP5 Peptide Promotes Abiotic Stress Tolerance, As Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis. Mol Cell Proteomics 2020; 19:1248-1262. [PMID: 32404488 PMCID: PMC8011570 DOI: 10.1074/mcp.ra119.001826] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 03/02/2020] [Indexed: 01/20/2023] Open
Abstract
Peptides derived from non-functional precursors play important roles in various developmental processes, but also in (a)biotic stress signaling. Our (phospho)proteome-wide analyses of C-TERMINALLY ENCODED PEPTIDE 5 (CEP5)-mediated changes revealed an impact on abiotic stress-related processes. Drought has a dramatic impact on plant growth, development and reproduction, and the plant hormone auxin plays a role in drought responses. Our genetic, physiological, biochemical, and pharmacological results demonstrated that CEP5-mediated signaling is relevant for osmotic and drought stress tolerance in Arabidopsis, and that CEP5 specifically counteracts auxin effects. Specifically, we found that CEP5 signaling stabilizes AUX/IAA transcriptional repressors, suggesting the existence of a novel peptide-dependent control mechanism that tunes auxin signaling. These observations align with the recently described role of AUX/IAAs in stress tolerance and provide a novel role for CEP5 in osmotic and drought stress tolerance.
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Affiliation(s)
- Stephanie Smith
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough, United Kingdom
| | - Shanshuo Zhu
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
| | - Lisa Joos
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Ianto Roberts
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Natalia Nikonorova
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Lam Dai Vu
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
| | - Elisabeth Stes
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium; VIB-UGent Center for Medical Biotechnology, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
| | - Hyunwoo Cho
- Department of Life Sciences, POSTECH Biotech Center, Pohang University of Science and Technology, Pohang, Republic of Korea
| | - Antoine Larrieu
- Centre for Plant Integrative Biology, University of Nottingham, Loughborough, United Kingdom
| | - Wei Xuan
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Benjamin Goodall
- Centre for Plant Integrative Biology, University of Nottingham, Loughborough, United Kingdom
| | - Brigitte van de Cotte
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Jessic Marie Waite
- Department of Biology, University of Washington, Seattle, Washington, USA
| | - Adeline Rigal
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Sigurd Ramans Harborough
- Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
| | - Geert Persiau
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Steffen Vanneste
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Gwendolyn K Kirschner
- Institute for Developmental Genetics, Heinrich-Heine University, Düsseldorf, Germany
| | - Elien Vandermarliere
- VIB-UGent Center for Medical Biotechnology, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
| | - Lennart Martens
- VIB-UGent Center for Medical Biotechnology, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
| | - Yvonne Stahl
- Institute for Developmental Genetics, Heinrich-Heine University, Düsseldorf, Germany
| | - Dominique Audenaert
- Screening Core, Gent, Belgium; Expertise Centre for Bioassay Development and Screening (C-BIOS), Ghent University, Ghent, Belgium
| | - Jirí Friml
- Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University (MU), Brno, Czech Republic; Institute of Science and Technology Austria (IST Austria), Klosterneuburg, Austria
| | - Georg Felix
- Zentrum für Molekularbiologie der Pflanzen, Plant Biochemistry, University Tübingen, Tübingen, Germany
| | - Rüdiger Simon
- Institute for Developmental Genetics, Heinrich-Heine University, Düsseldorf, Germany
| | - Malcolm J Bennett
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough, United Kingdom; Centre for Plant Integrative Biology, University of Nottingham, Loughborough, United Kingdom
| | - Anthony Bishopp
- Centre for Plant Integrative Biology, University of Nottingham, Loughborough, United Kingdom
| | - Geert De Jaeger
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Karin Ljung
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Stefan Kepinski
- Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
| | - Stephanie Robert
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Jennifer Nemhauser
- Department of Biology, University of Washington, Seattle, Washington, USA
| | - Ildoo Hwang
- Department of Life Sciences, POSTECH Biotech Center, Pohang University of Science and Technology, Pohang, Republic of Korea
| | - Kris Gevaert
- VIB-UGent Center for Medical Biotechnology, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, Ghent, Belgium
| | - Tom Beeckman
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium
| | - Ive De Smet
- Division of Plant and Crop Sciences, School of Biosciences, University of Nottingham, Loughborough, United Kingdom; Department of Plant Biotechnology and Bioinformatics, Ghent University, Belgium; VIB Center for Plant Systems Biology, Ghent, Belgium; Centre for Plant Integrative Biology, University of Nottingham, Loughborough, United Kingdom.
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Yu H, Zhang Y, Zhang Z, Zhang J, Wei Y, Jia X, Wang X, Ma X. Towards identification of molecular mechanism in which the overexpression of wheat cytosolic and plastid glutamine synthetases in tobacco enhanced drought tolerance. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 151:608-620. [PMID: 32335384 DOI: 10.1016/j.plaphy.2020.04.013] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 03/30/2020] [Accepted: 04/10/2020] [Indexed: 05/03/2023]
Abstract
Glutamine synthetases (GS) play an essential role in Nitrogen assimilation. Nonetheless, information respecting the molecular functions of GS in drought tolerance (DT) is limited. Here we show that overexpressing cytosolic GS1 or plastidic GS2 gene in tobacco enhanced DT of both root and leaf tissues of the two transgenic seedlings (named as GS1-TR and GS2-TR). RNA-seq analysis on root tissues showed that 83 aquaporin (AQP) genes were identified. Among them, 37 differential expression genes (DEGs) were found in the GS1-TR roots under normal condition, and all were down-regulated; no any DEGs in the GS2-TR roots were found. Contrastingly, under drought, 28 and 32 DEGs of AQP were up-regulated in GS1-TR and GS2-TR roots, respectively. GC-MS analysis on leaf tissues showed that glutamine (Gln) concentrations were negatively correlated AQP expressions in the all four conditions, which suggests that Gln, as a signal molecule, can negatively regulate many AQP expressions. Prestress accumulation of sucrose and proline (Pro) and chlorophyll, and had higher activities of ROS scavengers also contribute the plant DT in both of the two transgenic plants under drought. In addition, 5-aminolevulinic acid (ALA) was up-accumulated in GS2-TR leaves solely under normal condition, which leads to its net photosynthetic rate higher than that in GS1-TR leaves. Last but not the less, the PYL-PP2C-SnRK2 core ABA-signaling pathway was uniquely activated in GS1-TR independent of drought stress (DS). Therefore, our results suggest a possible model reflecting how overexpression of wheat TaGS1 and TaGS2 regulate plant responses to drought.
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Affiliation(s)
- Haidong Yu
- College of Life Sciences, Henan Agricultural University, Zhengzhou, 450002, Henan, China
| | - Yiming Zhang
- College of Life Sciences, Henan Agricultural University, Zhengzhou, 450002, Henan, China
| | - Zhiyong Zhang
- Collaborative Innovation Center of Henan Grain Crops, Henan Agriculture University, Zhengzhou, 450000, China
| | - Jie Zhang
- Collaborative Innovation Center of Henan Grain Crops, Henan Agriculture University, Zhengzhou, 450000, China
| | - Yihao Wei
- Collaborative Innovation Center of Henan Grain Crops, Henan Agriculture University, Zhengzhou, 450000, China
| | - Xiting Jia
- Collaborative Innovation Center of Henan Grain Crops, Henan Agriculture University, Zhengzhou, 450000, China
| | - Xiaochun Wang
- College of Life Sciences, Henan Agricultural University, Zhengzhou, 450002, Henan, China; Collaborative Innovation Center of Henan Grain Crops, Henan Agriculture University, Zhengzhou, 450000, China; State Key Laboratory of Wheat and Maize Crop Science in China, Henan Agriculture University, Zhengzhou, 450000, China.
| | - Xinming Ma
- Collaborative Innovation Center of Henan Grain Crops, Henan Agriculture University, Zhengzhou, 450000, China.
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Quiroga G, Erice G, Aroca R, Delgado-Huertas A, Ruiz-Lozano JM. Elucidating the Possible Involvement of Maize Aquaporins and Arbuscular Mycorrhizal Symbiosis in the Plant Ammonium and Urea Transport under Drought Stress Conditions. PLANTS (BASEL, SWITZERLAND) 2020; 9:E148. [PMID: 31979273 PMCID: PMC7076390 DOI: 10.3390/plants9020148] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Revised: 01/16/2020] [Accepted: 01/21/2020] [Indexed: 12/18/2022]
Abstract
This study investigates the possible involvement of maize aquaporins which are regulated by arbuscular mycorrhizae (AM) in the transport in planta of ammonium and/or urea under well-watered and drought stress conditions. The study also aims to better understand the implication of the AM symbiosis in the uptake of urea and ammonium and its effect on plant physiology and performance under drought stress conditions. AM and non-AM maize plants were cultivated under three levels of urea or ammonium fertilization (0, 3 µM or 10 mM) and subjected or not to drought stress. Plant aquaporins and physiological responses to these treatments were analyzed. AM increased plant biomass in absence of N fertilization or under low urea/ ammonium fertilization, but no effect of the AM symbiosis was observed under high N supply. This effect was associated with reduced oxidative damage to lipids and increased N accumulation in plant tissues. High N fertilization with either ammonium or urea enhanced net photosynthesis (AN) and stomatal conductance (gs) in plants maintained under well-watered conditions, but 14 days after drought stress imposition these parameters declined in AM plants fertilized with high N doses. The aquaporin ZmTIP1;1 was up-regulated by both urea and ammonium and could be transporting these two N forms in planta. The differential regulation of ZmTIP4;1 and ZmPIP2;4 with urea fertilization and of ZmPIP2;4 with NH4+ supply suggests that these two aquaporins may also play a role in N mobilization in planta. At the same time, these aquaporins were also differentially regulated by the AM symbiosis, suggesting a possible role in the AM-mediated plant N homeostasis that deserves future studies.
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Affiliation(s)
- Gabriela Quiroga
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), Profesor Albareda nº 1, 18008 Granada, Spain
| | - Gorka Erice
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), Profesor Albareda nº 1, 18008 Granada, Spain
| | - Ricardo Aroca
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), Profesor Albareda nº 1, 18008 Granada, Spain
| | | | - Juan Manuel Ruiz-Lozano
- Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), Profesor Albareda nº 1, 18008 Granada, Spain
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49
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Singh SP, Pandey S, Mishra N, Giri VP, Mahfooz S, Bhattacharya A, Kumari M, Chauhan P, Verma P, Nautiyal CS, Mishra A. Supplementation of Trichoderma improves the alteration of nutrient allocation and transporter genes expression in rice under nutrient deficiencies. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 143:351-363. [PMID: 31541990 DOI: 10.1016/j.plaphy.2019.09.015] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2018] [Revised: 09/09/2019] [Accepted: 09/10/2019] [Indexed: 05/13/2023]
Abstract
Nutrients are the finite natural resources that are essential for productivity and development of rice and its deficiency causes compromised yield along with reduced immunity against several biotic and abiotic stresses. In this study, the potential of Trichoderma reesei has been investigated as a biofertilizer (BF) to ameliorate nutrient stress in different rice cultivars at physiological, biochemical and molecular levels. The results indicated that cultivar Heena is much more compatible with BF as compared to cultivar Kiran at 50% nutrient limiting condition. Enhancement in physiological attributes and photosynthetic pigments were observed in BF treated Heena seedlings. The localization of biofertilizer in treated roots was further validated by scanning electron micrographs. This result correlated well with the higher levels of Indole acetic acid and Gibberellic acid in biofertilizer treated rice. Similarly, the uptake of micro-nutrients such as Fe, Co, Cu and Mo was found to be 1.4-1.9 fold higher respectively in BF treated Heena seedlings under 50% nutrient deficient condition. Furthermore, different stress ameliorating enzymes Guaiacol peroxidase, Super oxide dismutase, Total Phenolic Content, Phenol Peroxidase, Phenylalanine ammonia lyase and Ascorbate peroxidase in Heena seedlings were also increased by 1.8, 1.4, 1.2, 2.4, 1.2, and 8.3-fold respectively, at 50% nutrient deficient condition. The up-regulation of different micro and macro-nutrients allocation and accumulation; metal tolerance related; auxin synthesis genes in BF treated Heena as compared to 50% nutrient deficient condition was further supported by our findings that the application of biofertilizer efficiently ameliorated the deficiency of nutrients in rice.
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Affiliation(s)
- Satyendra Pratap Singh
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India
| | - Shipra Pandey
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Nishtha Mishra
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Ved Prakash Giri
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Department of Botany, Lucknow University, Hasanganj, Lucknow, 226 007, India
| | - Sahil Mahfooz
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India
| | - Arpita Bhattacharya
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Madhuree Kumari
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Priyanka Chauhan
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Pratibha Verma
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India
| | - Chandra Shekhar Nautiyal
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India
| | - Aradhana Mishra
- Division of Microbial Technology, Council of Scientific and Industrial Research- National Botanical Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, 201002, India.
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50
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Vidotti MS, Lyra DH, Morosini JS, Granato ÍSC, Quecine MC, de Azevedo JL, Fritsche-Neto R. Additive and heterozygous (dis)advantage GWAS models reveal candidate genes involved in the genotypic variation of maize hybrids to Azospirillum brasilense. PLoS One 2019; 14:e0222788. [PMID: 31536609 PMCID: PMC6752820 DOI: 10.1371/journal.pone.0222788] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2019] [Accepted: 09/07/2019] [Indexed: 11/18/2022] Open
Abstract
Maize genotypes can show different responsiveness to inoculation with Azospirillum brasilense and an intriguing issue is which genes of the plant are involved in the recognition and growth promotion by these Plant Growth-Promoting Bacteria (PGPB). We conducted Genome-Wide Association Studies (GWAS) using additive and heterozygous (dis)advantage models to find candidate genes for root and shoot traits under nitrogen (N) stress and N stress plus A. brasilense. A total of 52,215 Single Nucleotide Polymorphism (SNP) markers were used for GWAS analyses. For the six root traits with significant inoculation effect, the GWAS analyses revealed 25 significant SNPs for the N stress plus A. brasilense treatment, in which only two were overlapped with the 22 found for N stress only. Most were found by the heterozygous (dis)advantage model and were more related to exclusive gene ontology terms. Interestingly, the candidate genes around the significant SNPs found for the maize-A. brasilense association were involved in different functions previously described for PGPB in plants (e.g. signaling pathways of the plant's defense system and phytohormone biosynthesis). Our findings are a benchmark in the understanding of the genetic variation among maize hybrids for the association with A. brasilense and reveal the potential for further enhancement of maize through this association.
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Affiliation(s)
- Miriam Suzane Vidotti
- Department of Genetics, “Luiz de Queiroz” College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil
- * E-mail: (MSV); (RFN)
| | | | - Júlia Silva Morosini
- Department of Genetics, “Luiz de Queiroz” College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil
| | | | - Maria Carolina Quecine
- Department of Genetics, “Luiz de Queiroz” College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil
| | - João Lúcio de Azevedo
- Department of Genetics, “Luiz de Queiroz” College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil
| | - Roberto Fritsche-Neto
- Department of Genetics, “Luiz de Queiroz” College of Agriculture, University of São Paulo, Piracicaba, São Paulo, Brazil
- * E-mail: (MSV); (RFN)
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