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For: Salem GH, Dennis JU, Krynitsky J, Garmendia-Cedillos M, Swaroop K, Malley JD, Pajevic S, Abuhatzira L, Bustin M, Gillet JP, Gottesman MM, Mitchell JB, Pohida TJ. SCORHE: a novel and practical approach to video monitoring of laboratory mice housed in vivarium cage racks. Behav Res Methods 2015;47:235-50. [PMID: 24706080 DOI: 10.3758/s13428-014-0451-5] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Number Cited by Other Article(s)
1
Perry LJ, Perez BE, Wahba LR, Nikhil KL, Lenzen WC, Jones JR. A circadian behavioral analysis suite for real-time classification of daily rhythms in complex behaviors. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.23.581778. [PMID: 39149294 PMCID: PMC11326128 DOI: 10.1101/2024.02.23.581778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 08/17/2024]
2
Salem G, Cope N, Garmendia M, Pu A, Somenhalli A, Krynitsky J, Cubert N, Jones T, Dold G, Fletcher A, Kravitz A, Pohida T, Dennis J. MouseVUER: video based open-source system for laboratory mouse home-cage monitoring. Sci Rep 2024;14:2662. [PMID: 38302573 PMCID: PMC10834510 DOI: 10.1038/s41598-024-52788-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 01/23/2024] [Indexed: 02/03/2024]  Open
3
Le VA, Sterley TL, Cheng N, Bains JS, Murari K. Markerless Mouse Tracking for Social Experiments. eNeuro 2024;11:ENEURO.0154-22.2023. [PMID: 38233144 PMCID: PMC10901195 DOI: 10.1523/eneuro.0154-22.2023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 09/18/2023] [Accepted: 10/31/2023] [Indexed: 01/19/2024]  Open
4
Nwokedi EI, Bains RS, Bidaut L, Ye X, Wells S, Brown JM. Dual-Stream Spatiotemporal Networks with Feature Sharing for Monitoring Animals in the Home Cage. SENSORS (BASEL, SWITZERLAND) 2023;23:9532. [PMID: 38067907 PMCID: PMC10708582 DOI: 10.3390/s23239532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 11/15/2023] [Accepted: 11/24/2023] [Indexed: 12/18/2023]
5
Mösch L, Kunczik J, Breuer L, Merhof D, Gass P, Potschka H, Zechner D, Vollmar B, Tolba R, Häger C, Bleich A, Czaplik M, Pereira CB. Towards substitution of invasive telemetry: An integrated home cage concept for unobtrusive monitoring of objective physiological parameters in rodents. PLoS One 2023;18:e0286230. [PMID: 37676867 PMCID: PMC10484458 DOI: 10.1371/journal.pone.0286230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Accepted: 08/14/2023] [Indexed: 09/09/2023]  Open
6
Benedict J, Cudmore RH. PiE: an open-source pipeline for home cage behavioral analysis. Front Neurosci 2023;17:1222644. [PMID: 37583418 PMCID: PMC10423934 DOI: 10.3389/fnins.2023.1222644] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 07/13/2023] [Indexed: 08/17/2023]  Open
7
Luxem K, Sun JJ, Bradley SP, Krishnan K, Yttri E, Zimmermann J, Pereira TD, Laubach M. Open-source tools for behavioral video analysis: Setup, methods, and best practices. eLife 2023;12:e79305. [PMID: 36951911 PMCID: PMC10036114 DOI: 10.7554/elife.79305] [Citation(s) in RCA: 16] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 03/03/2023] [Indexed: 03/24/2023]  Open
8
Klein CJMI, Budiman T, Homberg JR, Verma D, Keijer J, van Schothorst EM. Measuring Locomotor Activity and Behavioral Aspects of Rodents Living in the Home-Cage. Front Behav Neurosci 2022;16:877323. [PMID: 35464142 PMCID: PMC9021872 DOI: 10.3389/fnbeh.2022.877323] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Accepted: 03/14/2022] [Indexed: 11/13/2022]  Open
9
Tran T, Mach J, Gemikonakli G, Wu H, Allore H, Howlett SE, Little CB, Hilmer SN. Male-Female Differences In The Effects Of Age On Performance Measures Recorded For 23 Hours In Mice. J Gerontol A Biol Sci Med Sci 2021;76:2141-2146. [PMID: 34171083 DOI: 10.1093/gerona/glab182] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Indexed: 11/13/2022]  Open
10
Matikainen-Ankney BA, Earnest T, Ali M, Casey E, Wang JG, Sutton AK, Legaria AA, Barclay KM, Murdaugh LB, Norris MR, Chang YH, Nguyen KP, Lin E, Reichenbach A, Clarke RE, Stark R, Conway SM, Carvalho F, Al-Hasani R, McCall JG, Creed MC, Cazares V, Buczynski MW, Krashes MJ, Andrews ZB, Kravitz AV. An open-source device for measuring food intake and operant behavior in rodent home-cages. eLife 2021;10:66173. [PMID: 33779547 PMCID: PMC8075584 DOI: 10.7554/elife.66173] [Citation(s) in RCA: 48] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 03/26/2021] [Indexed: 01/26/2023]  Open
11
Salem G, Krynitsky J, Cubert N, Pu A, Anfinrud S, Pedersen J, Lehman J, Kanuri A, Pohida T. Digital video recorder for Raspberry PI cameras with multi-camera synchronous acquisition. HARDWAREX 2020;8:e00160. [PMID: 35498233 PMCID: PMC9041262 DOI: 10.1016/j.ohx.2020.e00160] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Revised: 11/04/2020] [Accepted: 11/21/2020] [Indexed: 06/14/2023]
12
Yao H, Peterson AL, Li J, Xu H, Dennery PA. Heme Oxygenase 1 and 2 Differentially Regulate Glucose Metabolism and Adipose Tissue Mitochondrial Respiration: Implications for Metabolic Dysregulation. Int J Mol Sci 2020;21:ijms21197123. [PMID: 32992485 PMCID: PMC7582259 DOI: 10.3390/ijms21197123] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2020] [Revised: 09/22/2020] [Accepted: 09/24/2020] [Indexed: 12/15/2022]  Open
13
Rodent Arena Tracker (RAT): A Machine Vision Rodent Tracking Camera and Closed Loop Control System. eNeuro 2020;7:ENEURO.0485-19.2020. [PMID: 32284342 PMCID: PMC7221356 DOI: 10.1523/eneuro.0485-19.2020] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2019] [Revised: 03/30/2020] [Accepted: 03/31/2020] [Indexed: 11/21/2022]  Open
14
Hasenau JJ. Reproducibility and Comparative aspects of Terrestrial Housing Systems and Husbandry Procedures in Animal Research Facilities on Study Data. ILAR J 2020;60:228-238. [DOI: 10.1093/ilar/ilz021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Revised: 08/30/2019] [Accepted: 10/08/2019] [Indexed: 01/03/2023]  Open
15
Salem G, Krynitsky J, Hayes M, Pohida T, Burgos-Artizzu X. Three-Dimensional Pose Estimation for Laboratory Mouse From Monocular Images. IEEE TRANSACTIONS ON IMAGE PROCESSING : A PUBLICATION OF THE IEEE SIGNAL PROCESSING SOCIETY 2019;28:4273-4287. [PMID: 30946667 PMCID: PMC6677238 DOI: 10.1109/tip.2019.2908796] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
16
Singh S, Bermudez-Contreras E, Nazari M, Sutherland RJ, Mohajerani MH. Low-cost solution for rodent home-cage behaviour monitoring. PLoS One 2019;14:e0220751. [PMID: 31374097 PMCID: PMC6677321 DOI: 10.1371/journal.pone.0220751] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2019] [Accepted: 07/22/2019] [Indexed: 11/18/2022]  Open
17
Ali MA, Kravitz AV. Challenges in quantifying food intake in rodents. Brain Res 2019;1693:188-191. [PMID: 29903621 DOI: 10.1016/j.brainres.2018.02.040] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Revised: 02/04/2018] [Accepted: 02/24/2018] [Indexed: 01/13/2023]
18
Silva MJ, Eekhoff JD, Patel T, Kenney-Hunt JP, Brodt MD, Steger-May K, Scheller EL, Cheverud JM. Effects of High-Fat Diet and Body Mass on Bone Morphology and Mechanical Properties in 1100 Advanced Intercross Mice. J Bone Miner Res 2019;34:711-725. [PMID: 30615803 PMCID: PMC6879418 DOI: 10.1002/jbmr.3648] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/28/2018] [Revised: 11/09/2018] [Accepted: 11/19/2018] [Indexed: 01/19/2023]
19
Svenson KL, Paigen B. Recommended housing densities for research mice: filling the gap in data-driven alternatives. FASEB J 2019;33:3097-3111. [PMID: 30521372 PMCID: PMC6404583 DOI: 10.1096/fj.201801972r] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2018] [Accepted: 11/12/2018] [Indexed: 12/14/2022]
20
Anderson SJ, Lockhart JS, Estaki M, Quin C, Hirota SA, Alston L, Buret AG, Hancock TM, Petri B, Gibson DL, Morck DW. Effects of Azithromycin on Behavior, Pathologic Signs, and Changes in Cytokines, Chemokines, and Neutrophil Migration in C57BL/6 Mice Exposed to Dextran Sulfate Sodium. Comp Med 2019;69:4-15. [PMID: 30545428 PMCID: PMC6382047 DOI: 10.30802/aalas-cm-18-000001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Revised: 02/08/2018] [Accepted: 07/13/2018] [Indexed: 12/16/2022]
21
Ahloy-Dallaire J, Klein JD, Davis JK, Garner JP. Automated monitoring of mouse feeding and body weight for continuous health assessment. Lab Anim 2018;53:342-351. [PMID: 30286683 DOI: 10.1177/0023677218797974] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
22
Hillar C, Onnis G, Rhea D, Tecott L. Active State Organization of Spontaneous Behavioral Patterns. Sci Rep 2018;8:1064. [PMID: 29348406 PMCID: PMC5773533 DOI: 10.1038/s41598-017-18276-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2017] [Accepted: 12/06/2017] [Indexed: 11/16/2022]  Open
23
Bains RS, Wells S, Sillito RR, Armstrong JD, Cater HL, Banks G, Nolan PM. Assessing mouse behaviour throughout the light/dark cycle using automated in-cage analysis tools. J Neurosci Methods 2017;300:37-47. [PMID: 28456660 PMCID: PMC5909039 DOI: 10.1016/j.jneumeth.2017.04.014] [Citation(s) in RCA: 97] [Impact Index Per Article: 13.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Revised: 04/21/2017] [Accepted: 04/22/2017] [Indexed: 12/15/2022]
24
Allen MJ, Hankenson KD, Goodrich L, Boivin GP, von Rechenberg B. Ethical use of animal models in musculoskeletal research. J Orthop Res 2017;35:740-751. [PMID: 27864887 DOI: 10.1002/jor.23485] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Accepted: 11/16/2016] [Indexed: 02/04/2023]
25
Dougherty JP, Springer DA, Gershengorn MC. The Treadmill Fatigue Test: A Simple, High-throughput Assay of Fatigue-like Behavior for the Mouse. J Vis Exp 2016. [PMID: 27286034 DOI: 10.3791/54052] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]  Open
26
A systematic process for physical examination in preclinical research. Lab Anim (NY) 2015;44:89-90. [PMID: 25693104 DOI: 10.1038/laban.706] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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