1
|
De Raeymaeker X, Van Cauwenbergh S, Houben B, Karimi A, Sergeant G, Appeltans B. Magnets and children: a dangerous combination. Acta Chir Belg 2024; 124:156-159. [PMID: 37259806 DOI: 10.1080/00015458.2023.2219086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 05/23/2023] [Indexed: 06/06/2023]
Abstract
BACKGROUND Accidental ingestion of foreign bodies is a common problem in children. Fortunately, the gastrointestinal tract is quite resilient to foreign bodies. On the other hand, the ingestion of magnets can result in enormous morbidity. Because of their natural tendency to firmly adhere they can cause intestinal obstruction, pressure necrosis, fistula formation or perforation. With this case report, we aim to raise awareness of the risks that these magnets pose to children. METHODS We describe a case of intestinal perforation caused by the separate ingestion of multiple magnets from a children's toy (buckyballs, Neodymium spheres) by a two-year-old boy. A search in the Pubmed database showed some publications and varied management guidelines. RESULTS The boy was treated with an exploratory laparoscopy converted to a mini-laparotomy. We removed the four magnets through separate enterotomies. Postoperative recovery was uneventful. The boy was discharged on a postoperative day five and had no complications at three months follow-ups. CONCLUSION Accidental ingestion of multiple magnets is rare but can create a life-threatening situation in children. If the magnets are still in the stomach, endoscopic retrieval is needed. If they are beyond the stomach, in asymptomatic cases close clinical and radiographic vigilance is mandatory. When symptomatic we advise urgent removal. If treated on time, the surgical outcome is good and fast recovery is expected.
Collapse
Affiliation(s)
- X De Raeymaeker
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | | | - B Houben
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | - A Karimi
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | - G Sergeant
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| | - B Appeltans
- Department of Abdominal Surgery, Jessa Hospital, Hasselt, Belgium
| |
Collapse
|
2
|
Karimi A, Kheirandish F, Javadi Mamaghani A, Taghipour N, Mousavi SF, Aghajani A, Zebardast N, Faraji M, Fallahi S. Identification and genotyping of Acanthamoeba spp. in the water resources of western Iran. Parasite Epidemiol Control 2023; 22:e00308. [PMID: 37638113 PMCID: PMC10450349 DOI: 10.1016/j.parepi.2023.e00308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 05/15/2023] [Accepted: 05/22/2023] [Indexed: 08/29/2023] Open
Abstract
Background Acanthamoeba spp. is opportunistic amoeba that resides in water, soil, and air. Some pathogenic genotypes of the genus of Acanthamoeba can cause granulomatous amoebic encephalitis (GAE) in people with a defective immune system. The parasite can also cause Acanthamoeba keratitis (AK) among contact lens users. This study was conducted to isolate and identify the Acanthamoeba genotypes in water resources in Lorestan province, western Iran. Methods Collected 72 water samples from surface and groundwater (springs and aqueducts) in Lorestan province. Samples were filtered and cultured in non-nutrient 1.5% agar medium covered with Escherichia coli (E. coli) at 25 °C. DNA extraction was done and the PCR reaction was performed to detect the Acanthamoeba spp. The positive PCR products were sequenced to determine the genotypes of Acanthamoeba. Results Out of 72 examined water samples, 23.61% were positive for Acanthamoeba sp. by PCR. From PCR-positive samples, 8 (47.05%) samples were T4 genotypes and others were other Acanthamoeba genotypes (T1-T23). Therefore, approximately half of the genotypes belong to the pathogenic T4 genotype. Conclusions The water examined samples in western provinces of Iran have the potential risk factor for public health. Therefore, the efforts of healthcare providers are needed to identify, train, and prevention from human infections.
Collapse
Affiliation(s)
- Azadeh Karimi
- Department of Medical Parasitology and Mycology, School of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Farnaz Kheirandish
- Department of Medical Parasitology and Mycology, School of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
- Razi Herbal Medicines Research Center, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Amirreza Javadi Mamaghani
- Hepatitis Research Center, Department of Medical Parasitology and Mycology, School of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Niloofar Taghipour
- Department of Tissue Engineering and Applied Cell Sciences, School of Advanced Technologies in Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Syedeh Fatemeh Mousavi
- Department of Medical Parasitology and Mycology, School of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Ali Aghajani
- Department of Medical Parasitology and Mycology, faculty of medicine, Kashan University of Medical Sciences, Kashan, Iran
| | - Nozhat Zebardast
- Cellular and Molecular Research Center, School of Medicine, Guilan University of Medical Sciences, Rasht, Iran
| | - Majid Faraji
- MSc in Parasitology, Hamadan University of Medical Sciences, Hamadan, Iran
| | - Shirzad Fallahi
- Department of Medical Parasitology and Mycology, School of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
- Razi Herbal Medicines Research Center, Lorestan University of Medical Sciences, Khorramabad, Iran
| |
Collapse
|
3
|
Talebi R, Javadi Mamaghani A, Kheirandish F, Karimi A, Ebrahimzadeh F, Kazempour M, Zebardast N, Fallahi S. Molecular evaluation of Cryptosporidium spp. among breeding calves of Lorestan province Western Iran. Vet Med Sci 2023; 9:363-371. [PMID: 36534036 PMCID: PMC9857120 DOI: 10.1002/vms3.1024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
BACKGROUND Cryptosporidium spp. are opportunistic intestinal protozoans with global distribution and are of great importance as zoonotic protozoans are common to humans and domestic animals, including cattle and calves. Identification and detection of parasite species using precise methods including molecular methods can be an effective step in treating and controlling parasites. OBJECTIVES This study aimed to investigate the prevalence of Cryptosporidium among breeding calves of Khorramabad city, Lorestan province, Western Iran, using PCR. METHODS The faecal samples were taken from 181 healthy and diarrhoeal calves and after the Ziehl Neelsen Acid-fast staining and microscopic evaluation, the genomic DNA was extracted for molecular evaluations. To detect Cryptosporidium species, specific primers targeting the SAM-1 gene of Cryptosporidium and a commercial master mix were used for PCR. RESULTS Out of 181 faecal samples of breeding calves in Khorramabad city, 9 samples (5%) were positive for Cryptosporidium spp. using the PCR method. Statistical analysis of the data showed that there was no significant statistical relationship between Cryptosporidium infection of the calves and variables of age, breed, type of water consumption, clinical signs of diarrhoea, and sampling location, while parasite infection had a significant relationship with calf gender so that all Cryptosporidium positive samples were from male calves (p ≤ 0.05). CONCLUSIONS Considering the presence of Cryptosporidium infection, the region's traditional grazing system, and the close relationship between livestock and humans, there is a possibility of human infection in the region. So preventive measures such as periodic animal testing with sensitive and accurate diagnostic techniques including PCR, pharmacological treatment of livestock, water hygiene and the use of industrial grazing instead of traditional grazing to improve the hygiene of food consumed by livestock are recommended.
Collapse
Affiliation(s)
- Razieh Talebi
- Department of Medical Parasitology and MycologySchool of MedicineLorestan University of Medical SciencesKhorramabadIran
| | - Amirreza Javadi Mamaghani
- Department of Medical Parasitology and MycologySchool of MedicineLorestan University of Medical SciencesKhorramabadIran
- Hepatitis Research CenterSchool of MedicineLorestan University of Medical ScienceKhorramabadIran
| | - Farnaz Kheirandish
- Department of Medical Parasitology and MycologySchool of MedicineLorestan University of Medical SciencesKhorramabadIran
- Razi Herbal Medicines Research CenterSchool of MedicineLorestan University of Medical SciencesKhorramabadIran
| | - Azadeh Karimi
- Department of Medical Parasitology and MycologySchool of MedicineLorestan University of Medical SciencesKhorramabadIran
| | - Farzad Ebrahimzadeh
- Department of Biostatistics and Epidemiology, School of Health and NutritionLorestan University of Medical SciencesKhorramabadIran
| | - Mohamad Kazempour
- Department of ChemistryTabriz BranchIslamic Azad UniversityTabrizIran
| | - Nozhat Zebardast
- Cellular and Molecular Research CenterSchool of MedicineGuilan University of Medical SciencesRashtIran
| | - Shirzad Fallahi
- Department of Medical Parasitology and MycologySchool of MedicineLorestan University of Medical SciencesKhorramabadIran
- Hepatitis Research CenterSchool of MedicineLorestan University of Medical ScienceKhorramabadIran
| |
Collapse
|
4
|
Najafi F, Ahmadi H, Maghsoumi A, Huma K, Amini A, Azimi L, Karimi A, Bayat M, Naseri N. Size-dependent molecular interaction of nontraditional 2D antibiotics with Staphylococcus aureus. Biomed Mater 2022; 18. [PMID: 36541547 DOI: 10.1088/1748-605x/aca500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Accepted: 11/22/2022] [Indexed: 11/23/2022]
Abstract
The application of nanomaterials for their antibacterial properties is the subject of many studies due to antibiotic resistance of pathogen bacteria and the necessity of omitting them from food and water resources. Graphene oxide (GO) is one of the most popular candidates for antibacterial application. However, the optimum condition for such an effect is not yet clear for practical purposes. To shed light on how GO and bacteria interaction depends on size, a wide range of GO flake sizes from hundreds of µm2going down to nano-scale as low as 10 N m2was produced. In anin-vitrosystematic study to inhibitStaphylococcus aureusgrowth, the correlation between GO flake size, thickness, functional group density, and antibacterial activity was investigated. The GO suspension with the average size of 0.05 µm2, in the order of the size of the bacteria itself, had the best bacteriostatic effect onS. aureuswith the minimum inhibitory concentration value of 8 μg ml-1, well within the acceptable range for practical use. The bacteriostatic effect was measured to be a 76.2% reduction of the colony count over 2 h of incubation and the mechanism of action was the wrapping and isolation of cells from the growth environment. Furthermore,in-vivoanimal studies revealed that 16 μg ml-1of the optimum GO has efficient antibacterial performance against the methicillin-resistant strains of the bacteria with an enhanced wound healing rate and tensiometrial parameters which is important for realized targets.
Collapse
Affiliation(s)
- F Najafi
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| | - H Ahmadi
- Department of Biology and Anatomical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A Maghsoumi
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| | - K Huma
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| | - A Amini
- Department of Biology and Anatomical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - L Azimi
- Pediatric Infections Research Centre, Research Institute for Children's Health, Shahid Beheshti University of Medical Science, Tehran, Iran
| | - A Karimi
- Pediatric Infections Research Centre, Research Institute for Children's Health, Shahid Beheshti University of Medical Science, Tehran, Iran
| | - M Bayat
- Department of Biology and Anatomical Sciences, Shahid Beheshti University of Medical Sciences, Tehran, Iran.,Price Institute of Surgical Research, University of Louisville, and Noveratech LLC, Louisville, KY, United States of America
| | - N Naseri
- Department of Physics, Sharif University of Technology, PO Box, Tehran 11365-11155, Iran
| |
Collapse
|
5
|
Kamrani N, Karimi A, Nazari M, Masoudi R. Modulation of Negative Effects of Physiological Stress on Frozen-Thawed Semen with Nutrition of Organic Selenium in Ross 308 Rooster. Arch Razi Inst 2021; 76:1787-1795. [PMID: 35546988 PMCID: PMC9083867 DOI: 10.22092/ari.2021.355960.1765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 10/02/2021] [Indexed: 06/15/2023]
Abstract
Current experiment was carried out in factorial 2×2 arrangement to study the effects of stress (with or without dexamethasone administration) and addition of dietary selenium (with or without selenium supplementation in the diet) in male broiler breeder on the quality of frozen-thawed sperm under oxidative stress induced by dexamethasone. A total of 24 broiler breeder roosters with the age of 28 weeks were used based on a completely randomized design with four therapeutic approaches (factorial 2×2) and six birds in each approach. The experimental treatments were: 1) basal diet without selenium supplementation and injection of saline (CON), 2) basal diet with dexamethasone injection (4 mg/kg BW, three times every other day for one week), (DEX), 3) without dexamethasone injection and supplementation with 0.3 mg/kg selenium (Sel-Plex), and 4) dexamethasone injection and basal diet supplemented with 0.3 mg/kg of diet selenium (Sel-Plex+Dex). Sperm samples were collected from roosters. Motility, progressive motility, plasma membrane integrity, viability, malondialdehyde concentration and antioxidant parameters were evaluated in fresh and frozen-thawed semen. In spite of non-significant interaction effects, factorial analysis indicated the significant effect of every factor on different experimental parameters in fresh and frozen-thawed semen (P<0.05); The results revealed that total and progressive motility, plasma membrane integrity and viability were lower in DEX group when compared with other treatments (P<0.05). On the other hand, malondialdehyde concentration was higher in DEX group in comparison with Con, Sel-Plex and Sel-Plex+DEX groups (P<0.05). Moreover, total antioxidant capacity, level of glutathione peroxidase and superoxide dismutase were lower in DEX group as compared with other treatments (P<0.05). Our findings indicated that administration of selenium in dexamethasone-receiving roosters (Sel-Plex+DEX) improved the parameters of fresh and frozen-thawed sperm; but the best results were observed in Sel-Plex treatment. Therefore, selenium supplementation in the diet of roosters without dexamethasone injection improved total motility, progressive motility, membrane integrity, viability, malondialdehyde, total antioxidant capacity, glutathione peroxidase and superoxide dismutase pre- and post-freezing. It can be concluded, selenium in organic forms in stressed and non-stressed rooster's diet might improve all motility and antioxidant parameters in fresh and frozen-thawed sperm.
Collapse
Affiliation(s)
- N Kamrani
- Department of Animal Science, Faculty of Ahar Agriculture & Natural Resources, University of Tabriz, Tabriz, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Ahar Agriculture & Natural Resources, University of Tabriz, Tabriz, Iran
| | - M Nazari
- Department of Animal Science, Faculty of Agriculture, University of Tabriz, Tabriz, Iran
| | - R Masoudi
- Animal Science Research Institute of Iran (ASRI), Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| |
Collapse
|
6
|
Salari MH, Karimi A. Prevalence of Ureaplasma urealyticum and Mycoplasma genitalium in men with non-gonococcal urethritis. East Mediterr Health J 2021. [DOI: 10.26719/2003.9.3.291] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The study in Teheran, Islamic Republic of Iran, investigated the prevalence of Ureaplasma urealyticum and Mycoplasma species in men with non-gonococcal urethritis. Urethral swab samples were collected from 125 cases and 125 healthy men as a control group. The samples were then investigated by culture methods. The rates of detected bacteria in case and control groups were 19.2% and 7.2% for U. urealyticum, 7.2% and 0.8% for M. genitalium, and 2.4% and 1.6% for M. hominis respectively. Statistical analysis showed a significant difference between case and control groups in the prevalence of U. urealyticum and M. genitalium but not M. hominis. It is concluded that in men, U. urealyticum and M. genitalium may have an etiologic role in non-gonococcal urethritis
Collapse
|
7
|
Karimi A, Zarifkar A, Miri M. Ultracompact temporal integrator using graphene-based long-range hybrid plasmonic waveguides. Appl Opt 2021; 60:6736-6741. [PMID: 34613150 DOI: 10.1364/ao.431648] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 07/07/2021] [Indexed: 06/13/2023]
Abstract
A microdisk-resonator add-drop temporal integrator, composed of a long-range hybrid plasmonic waveguide, with graphene as the central layer, is proposed for the first time, to the best of our knowledge. The integrator benefits from a considerable integration time of ∼5.55ps, which is about 11 times longer than our previously proposed plasmonic integrator, and also is fairly comparable with the integration time of a microring-based integrator with a ring radius of 47.5 µm. Based on 3D-finite-difference time-domain simulations, the integrator, with a significantly compact footprint of ∼4µm×3µm, shows the FWHM of 53 GHz. The presented graphene-based temporal integrator, with a highly miniaturized footprint and satisfactory integration time, may find applications in ultrafast plasmonic-based signal processing systems.
Collapse
|
8
|
Tabatabaei-Panah PS, Moravvej H, Alirajab M, Arghand F, Babaei H, Didehvar E, Hajmanouchehri S, Hosseine F, Karimi A, Mahdian M, Parvizi Moridani S, Sakhaie F, Ludwig RJ, Akbarzadeh R. COL17A1 gene polymorphisms are frequent in bullous pemphigoid. J Eur Acad Dermatol Venereol 2021; 35:e535-e538. [PMID: 33871111 DOI: 10.1111/jdv.17285] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
| | - H Moravvej
- Skin Research Centre, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - M Alirajab
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - F Arghand
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - H Babaei
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - E Didehvar
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - S Hajmanouchehri
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - F Hosseine
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - A Karimi
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - M Mahdian
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - S Parvizi Moridani
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - F Sakhaie
- Biology Department, East Tehran Branch, Islamic Azad University, Tehran, Iran
| | - R J Ludwig
- Lübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, Germany
| | - R Akbarzadeh
- Skin Research Centre, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- Lübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, Germany
- Institute of Anatomy, University of Lübeck, Lübeck, Germany
| |
Collapse
|
9
|
Karimi A, Alijoo YA, Kazemi-Bonchenari M, Mirzaei M, Sadri H. Effects of supplemental fat sources and forage feeding levels on growth performance, nutrient digestibility, ruminal fermentation, and nitrogen utilization in dairy calves. Animal 2021; 15:100179. [PMID: 33589349 DOI: 10.1016/j.animal.2021.100179] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 01/10/2021] [Accepted: 01/11/2021] [Indexed: 11/16/2022] Open
Abstract
Knowledge regarding the potential interactions between supplemental fat source and fiber level in starter diet of dairy calves is lacking. The aim of the present study was to investigate the effects of supplemental saturated fat [palm fat (PLF) containing 86% palmitic acid (C16:0)] vs. unsaturated fat [soybean oil (SBO) containing 51% linoleic acid (C18:2)] and forage level on feed intake, growth performance, ruminal fermentation, nutrient digestibility, and metabolic traits in dairy calves. Forty newborn Holstein female calves (BW = 39.7 ± 1.8 kg) were assigned to 1 of 4 treatment groups (each consisting of 10 animals) in a 2 × 2 factorial arrangement of fat source [soybean oil vs. palm fat; 3% of starter based on DM basis] and alfalfa hay level (0 vs. 15%, on DM basis): SBO or PLF with (AH) or without (NAH) alfalfa hay. Calves had ad libitum access to water and starters throughout the study and a constant amount of milk was offered among experimental calves during the pre-weaning period. All calves were weaned on day 63 of age and remained in the study until day 73 of age. The results showed that the lowest and the highest starter intake and average daily gain during pre-weaning period was observed when calves received SBO-AH and PLF-AH, respectively. Accordingly, the lowest wither and hip heights at weaning time (day 63) and final wither height (day 73) were observed in SBO-AH group across treatments. Calves received PLF-AH had the highest weaning and final BW compared to other groups. Feed efficiency tended to be higher in PLF groups compared with SBO calves. Calves fed SBO-AH had the lowest digestibility of organic matter and neutral detergent fiber and also total short chain fatty acid concentrations in rumen compared with other groups. The SBO calves had lower urinary allantoin, urinary purine derivatives, and microbial protein synthesis than PLF calves; however, urinary nitrogen increased with SBO supplementation. In summary, the supplementation of SBO rich in C18:2 and AH during the pre-weaning period resulted in negative responses on growth performance, digestibility, and ruminal fermentation profile. Therefore, the inclusion SBO rich in C18:2 along with forage in the starter is not recommendable for young dairy calves.
Collapse
Affiliation(s)
- A Karimi
- Department of Animal Science, Faculty of Agriculture, Urmia University, 5756151818 Urmia, Iran
| | - Y A Alijoo
- Department of Animal Science, Faculty of Agriculture, Urmia University, 5756151818 Urmia, Iran.
| | - M Kazemi-Bonchenari
- Department of Animal Science, Faculty of Agriculture and Natural Resources, Arak University, 38156-8-8349 Arak, Iran
| | - M Mirzaei
- Department of Animal Science, Faculty of Agriculture and Natural Resources, Arak University, 38156-8-8349 Arak, Iran
| | - H Sadri
- Department of Clinical Science, Faculty of Veterinary Medicine, University of Tabriz, 516616471 Tabriz, Iran; Institute of Animal Science, Physiology and Hygiene Unit, University of Bonn, 53115 Bonn, Germany
| |
Collapse
|
10
|
Mosavari N, Karimi A, Tadayon K, Shahhosseini G, Zavaran Hosseini A, Babaie M. Evaluation of Heating and Irradiation Methods for Production of Purified Protein Derivative (PPD) of Mycobacterium Tuberculosis. Arch Razi Inst 2021; 75:439-449. [PMID: 33403839 DOI: 10.22092/ari.2019.123082.1238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Accepted: 12/10/2019] [Indexed: 09/30/2022]
Abstract
Tuberculin skin test, also known as the tuberculin or purified protein derivative (PPD) test, is an extensively applied diagnostic test for the detection of primary infection with Mycobacterium tuberculosis (Mtb). The production of PPD is accompanied by some difficulties that require a series of modifications in the production and purification processes. The present study aimed to determine the facilitation level of the manufacturing process by modifying evaluation methods for the production of PPD tuberculin. Mtb strains were cultured in Lowenstein-Jensen media, and the cultured strains were inoculated into the Dorset-Henley liquid medium by the biphasic medium of potato-Dorset-Henley. After incubation, flasks containing cultured strain were selected for bacterial inactivation, and the optimal gamma radiation dose(s) was determined. Tuberculoproteins were precipitated by ammonium sulfate (AS) and Trichloroacetic acid (TCA). Protein concentration was determined using the Bradford and Kjeldahl protein assay methods. Finally, the lymphocyte transformation test and potency test were performed. Based on the results, the Dorset-Henley liquid medium is suitable for the massive growth of the bacterium. The transferal of Mtb from solid to liquid medium was directly carried out without intermediate culture. It was found that during tuberculoprotein production, heating at 100&deg;C for 3 h would be safe for killing mycobacterium. Furthermore, the simultaneous use of heating and gamma irradiation (8 kGgy) killed all of the mycobacteria, while doses of 1, 1.5, and 7 kGy decreased a significant number of bacterial cells. The results also indicated that the concentration of tuberculoprotein extracted by TCA precipitation method was higher than that obtained by AS precipitation. The tuberculoproteins which were produced by these two methods in the lymphocyte transformation test were not significantly different in terms of potency (P&gt;0.05). Moreover, due to the high volume of produced protein, the protein measurement was more efficiently carried out by the Kjeldahl method, compared to the Bradford method. Finally, the results of the present study demonstrated that in addition to the novel approach of gamma irradiation, optimum methods are efficient and applicable in the production of PPD tuberculin.
Collapse
Affiliation(s)
- N Mosavari
- . Reference Laboratory of Bovine Tuberculosis, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - A Karimi
- Department of Molecular Medicine, Faculty of Advanced Medical Sciences, Tabriz University of Medical Sciences, Tabriz, Iran
| | - K Tadayon
- . Reference Laboratory of Bovine Tuberculosis, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Gh Shahhosseini
- Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute, Karaj, Iran.,Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute, Karaj, Iran
| | | | - M Babaie
- . Reference Laboratory of Bovine Tuberculosis, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| |
Collapse
|
11
|
Abdollahi A, Karimi A, Sadeghi AA, Bedford MR, Ashengroph M. The effects of the fiber source and xylanase supplementation on production, egg quality, digestibility, and intestinal morphology in the aged laying hen. Poult Sci 2020; 100:100936. [PMID: 33518298 PMCID: PMC7936207 DOI: 10.1016/j.psj.2020.12.033] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Revised: 12/04/2020] [Accepted: 12/15/2020] [Indexed: 12/23/2022] Open
Abstract
This study was conducted to evaluate the effects of the fiber source (wheat bran [WB] or sugar beet pulp [SBP]) and xylanase supplementation on production, egg quality, ileal digestibility, intestinal morphology, and gastrointestinal pH in aged laying hens. A total of 540 laying hens (Lohman LSL Lite; 70 wk of lay) were randomized into 10 treatments (6 replicate cages of 9 birds) consisting of a corn soy control supplemented with 0, 3, or 6% WB or SBP with or without xylanase (100 mg of xylanase preparation per kg) for a period of 9 wk in a 5 × 2 factorial arrangement. Hens fed with the diets containing either of the levels of SBP or 6% WB had lower hen-day production, and addition of the enzyme improved hen-day production (P < 0.05), but it could not compensate for the lost production due to the higher levels of either of the fiber sources. Supplementation of 6% SBP to the control diet decreased egg mass (P < 0.05). All fiber-supplemented diets significantly decreased ADFI, which was restored on enzyme addition, with the exception of 3% WB diet. Treatments had no effects on egg weight, feed conversion ratio, egg quality, and serum and carcass traits, except for ileum weight, which was greater in hens fed with the 6% SBP diet (P < 0.05). Adding 3% SBP increased ileal DM digestibility (P < 0.05). Addition of 3% WB improved jejunal villus height, villus height-to-crypt depth ratio, and villus surface area (P < 0.05). Villus surface area, DM, organic matter, and protein digestibility increased as a result of enzyme supplementation (P < 0.05). Cecal pH was reduced on feeding diets containing 3% WB, containing 3% SBP, and with enzyme supplementation (P < 0.05). In conclusion, addition of 3% WB in a corn soy control diet has the potential to improve small intestine morphology in older hens without adverse effects on performance, especially if accompanied by the use of an enzyme, which simultaneously improved morphological traits and nutrient digestibility.
Collapse
Affiliation(s)
- A Abdollahi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran.
| | - A A Sadeghi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran
| | - M R Bedford
- AB Vista, Marlborough, Wiltshire, SN8 4AN, United Kingdom
| | - M Ashengroph
- Department of Biological Science, Faculty of Science, University of Kurdistan, Sanandaj, 416, Kurdistan, Iran
| |
Collapse
|
12
|
Karimi A, Jones K. Assessing national human footprint and implications for biodiversity conservation in Iran. Ambio 2020; 49:1506-1518. [PMID: 31955400 PMCID: PMC7320097 DOI: 10.1007/s13280-019-01305-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Revised: 12/03/2019] [Accepted: 12/04/2019] [Indexed: 06/10/2023]
Abstract
Recent global-scale studies have revealed intense levels of human activities within many protected areas worldwide. However, these analyses rely on coarse global-scale data, making their utility for informing local-scale conservation action limited. We developed a spatially explicit national human footprint index for Iran, a biologically diverse country in west Asia, based on the latest high-resolution datasets available for human pressures. We assessed the extent and intensity of human pressure within Iranian protected areas, and across the biomes and ecoregions of Iran. We found that almost one-quarter (22%) of officially protected land was under intense human pressure, mostly located in north-west and west of the country. Protected areas within temperate grasslands, savannas, and shrublands are most impacted, with two-third of their area under intense pressure. The findings provide valuable information for targeting management strategies to alleviate human pressures within protected areas, and also act as a comprehensive database to track the state of protected areas through time.
Collapse
Affiliation(s)
- Azadeh Karimi
- Department of Environment, Faculty of Natural Resources and Environment, Ferdowsi University of Mashhad, Mashhad, 9177948974 Iran
| | - Kendall Jones
- Wildlife Conservation Society, Global Conservation Program, Bronx, NY 10460 USA
| |
Collapse
|
13
|
Derakhshan S, Aminishakib P, Karimi A, Saffar H, Abdollahi A, Mohammadpour H, Kharazi Fard MJ, Memarha A. High frequency of BRAF V600E mutation in Iranian population ameloblastomas. Med Oral Patol Oral Cir Bucal 2020; 25:e502-e507. [PMID: 32388526 PMCID: PMC7338065 DOI: 10.4317/medoral.23519] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Accepted: 01/27/2020] [Indexed: 12/11/2022] Open
Abstract
Background Ameloblastoma is a common locally invasive but slow-growing neoplasm of the jaws with an odontogenic origin. Association between BRAF V600E mutation and clinicopathologic features and behavior of ameloblastoma remains controversial. This study aimed to evaluate BRAF V600E gene mutation and expression of its related proteins with clinicopathologic parameters in conventional ameloblastoma.
Material and Methods 50 Formalin-fixed paraffin-embedded blocks were included in this study. Immunohistochemistry was done using rabbit monoclonal BRAF V600E mutation-specific antibody VE1. Quantitative real-time polymerase chain reaction assay was used for evaluating of BRAF V600E mutation.
Results Expression of BRAF V600E antibody was Positive in 42 out of 50 cases (84%). 46 (92%) out of 50 specimens showed BRAF V600E mutation. There were 13 cases of recurrence (26%). 3 out of 4 cases with negative mutations did not show recurrence.
Conclusions We report the highest frequency (92%) of BRAF V600E mutation in ameloblastomas in the Iranian population. Although there was not a significant association between BRAF V600E‑positive immunoexpression and recurrence and clinicopathologic parameters, its high frequency could emphasize its role as a therapeutic marker in the future. Key words:Conventional ameloblastoma, BRAF V600E, recurrence.
Collapse
Affiliation(s)
- S Derakhshan
- North Kargar St., School of Dentistry Tehran University of Medical Sciences Tehran, Iran. Postal Code: 1439955991
| | | | | | | | | | | | | | | |
Collapse
|
14
|
Karimi A, Bassani M, Boroujerdian AM, Catani L. Investigation into passing behavior at passing zones to validate and extend the use of driving simulators in two-lane roads safety analysis. Accid Anal Prev 2020; 139:105487. [PMID: 32135336 DOI: 10.1016/j.aap.2020.105487] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 02/17/2020] [Accepted: 02/19/2020] [Indexed: 06/10/2023]
Abstract
A passing maneuver allows drivers to maintain their desired speed on two-lane highways. However, it entails a high risk of collision with vehicles travelling in the opposite direction. Investigating drivers' behavior while performing passing maneuvers could provide helpful information on the factors that influence this process. Driving simulators have become important tools for driving behavior research studies as they are safe, facilitate the controlled use of experimental variables, and generate detailed output data. It remains to be seen whether simulator results can be considered representative of real-life driving conditions. With respect to passing maneuvers, no study has made a comprehensive and direct comparison between drivers' passing behavior in the field and driver behavior observed in a simulated environment. In this validation study, a fixed-base interactive simulator was used to collect data from fifty-four participants (eighteen Iranians and thirty-six Italians) involved in several traffic scenarios on a two-lane rural highway segment (obtained by varying the speed of opposing vehicles, lead vehicles and headways in the opposite direction). A 3D model and its environmental characteristics were realized from the real segment which had previously been surveyed with drones to collect videos and derive data on real passing maneuvers. The results for the two-sided K-S test revealed no statistically significant difference in the accepted gap, effective accepted gap, perception reaction time, and time to collision variables between the field and the simulator at the 95 % confidence level. However, when conducting a one-sided K-S test, some statistical directional differences were found in the cases of the accepted gap and perception reaction time variables, which exhibited lower values in the field compared to the simulator again at the 95 % confidence level. Although the passing duration was statistically higher in the simulator than in the field, the shape of the two distributions was not statistically different. Analysis showed that differences in the passing duration are due to the lower passing vehicle speed and lower speed difference with the simulator than in the field, which are caused by truncating headways in the subject direction in the simulator. The cultural background of participants did not result in any discernible difference in passing behavior. The results would support a more extensive use of driving simulators in future passing behavior studies.
Collapse
Affiliation(s)
- A Karimi
- Department of Civil and Environmental Engineering, Tarbiat Modares University, Tehran, Iran
| | - M Bassani
- Department of Environment, Land and Infrastructure Engineering, Politecnico di Torino, Torino, Italy
| | - A M Boroujerdian
- Department of Civil and Environmental Engineering, Tarbiat Modares University, Tehran, Iran.
| | - L Catani
- Department of Environment, Land and Infrastructure Engineering, Politecnico di Torino, Torino, Italy
| |
Collapse
|
15
|
Tajbakhsh A, Karimi A, Zhang A. Modeling land cover change dynamic using a hybrid model approach in Qeshm Island, Southern Iran. Environ Monit Assess 2020; 192:303. [PMID: 32322991 DOI: 10.1007/s10661-020-08270-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2019] [Accepted: 03/31/2020] [Indexed: 06/11/2023]
Abstract
Multiple factors including natural and human-induced ones lead to land cover change in the landscape. Therefore, identifying the pattern of land cover change can help inform land-use management and prevent associated issues which can affect the natural resources of the landscape. The aim of this study is to assess land cover change in the Qeshm Island in southern Iran by combining the resulting outputs of multiple modeling methods, cellular automata (CA), Markov chains, and artificial neural networks (ANN) based on land cover maps for the years 1996, 2006, and 2016 that have been extracted from satellite imagery (Landsat 5, 7, and 8). In order to evaluate the accuracy of modeling, the Kappa coefficient was calculated to be 0.8. Then, land cover changes for 2025 were predicted by a hybrid model (CA-Markov-ANN). The results indicate that the classes of built-up areas, vegetation, and mangrove forests have changed more significantly from 1996 to 2016 compared with other classes. Land cover maps generated in this study showed that built-up areas have grown significantly in recent decades due to the region's growing population and development of ports, commercial, and industrial areas. Due to the climate change, the land area covering vegetation has decreased dramatically. The size of the mangrove forests has increased over the time period of the study (1996-2025). The findings of this study can inform land-use planning decisions by providing them with a comprehensive overview of land cover conditions in the future.
Collapse
Affiliation(s)
- Amir Tajbakhsh
- College of Land Management, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Azadeh Karimi
- Department of Environment, Faculty of Natural Resources and Environment, Ferdowsi University of Mashhad, Mashhad, Iran.
| | - Anlu Zhang
- College of Land Management, Huazhong Agricultural University, Wuhan, Hubei Province, China
| |
Collapse
|
16
|
Morita PP, Rocha AS, Shaker G, Lee D, Wei J, Fong B, Thatte A, Karimi A, Xu L, Ma A, Wong A, Boger J. Comparative Analysis of Gait Speed Estimation Using Wideband and Narrowband Radars, Thermal Camera, and Motion Tracking Suit Technologies. J Healthc Inform Res 2020; 4:215-237. [PMID: 35415448 PMCID: PMC8982681 DOI: 10.1007/s41666-020-00071-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 01/17/2020] [Accepted: 01/27/2020] [Indexed: 01/14/2023]
Abstract
AbstractResearch has shown that cognitive and physical functioning of older adults can be reflected in indicators such as walking speed. While changes in cognition, mobility, or health cause changes in gait speed, often gradual variations in walking speed go undetected until severe problems arise. Discrete clinical assessments during clinical consultations often fail to detect changes in day-to-day walking speeds and do not reflect walking speeds in everyday environments, where most of the mobility issues happen. In this paper, we compare four walking speed measurement technologies to a GAITRite mat (gold standard): (1) an ultra wideband radar (covering the band from 3.3 GHz to 10 GHz), (2) a narrow band 24-GHz radar (with a bandwidth of 250 MHz), (3) a perception Neuron Motion Tracking suit, and (4) a thermal camera. Data were collected in parallel using all sensors at the same time for 10 healthy adults for normal and slow walking paces. A comparison of the sensors indicates better performance at lower gait speeds, with offsets (when compared to GAITRite) between 0.1 and 20% for the ultra wideband radar, 1.9 and 17% for the narrowband radar, 0.1 and 38% for the thermal camera, and 1.7 and 38% for the suit. This paper supports the potential of unobtrusive radar-based sensors and thermal camera technologies for ambient autonomous gait speed monitoring for contextual, privacy-preserving monitoring of participants in the community.
Collapse
Affiliation(s)
- P. P. Morita
- School of Public Health and Health Systems, University of Waterloo, Waterloo, ON Canada
- Centre for Global eHealth Innovation, Techna Institute, University Health Network, Toronto, ON Canada
- Institute of Health Policy, Management, and Evaluation, University of Toronto, Toronto, ON Canada
- Research Institute for Aging, Waterloo, ON Canada
| | - A. S. Rocha
- School of Public Health and Health Systems, University of Waterloo, Waterloo, ON Canada
- Goiano Federal Institute, Trindade, GO Brazil
| | - G. Shaker
- Research Institute for Aging, Waterloo, ON Canada
- Department of Electrical and Computer Engineering, University of Waterloo, Waterloo, ON Canada
- Department of Mechanical and Mechatronics Engineering, University of Waterloo, Waterloo, ON Canada
- Waterloo Artificial Intelligence Institute, Waterloo, ON Canada
| | - D. Lee
- Department of Mechanical and Mechatronics Engineering, University of Waterloo, Waterloo, ON Canada
| | - J. Wei
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - B. Fong
- Department of Mechanical and Mechatronics Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Thatte
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Karimi
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - L. Xu
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Ma
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - A. Wong
- Research Institute for Aging, Waterloo, ON Canada
- Waterloo Artificial Intelligence Institute, Waterloo, ON Canada
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| | - J. Boger
- Research Institute for Aging, Waterloo, ON Canada
- Department of Systems Design Engineering, University of Waterloo, Waterloo, ON Canada
| |
Collapse
|
17
|
Alipour J, Mehdipour Y, Karimi A. Epidemiology and outcome analysis of 3030 burn patients with an ICD-10 approach. Ann Burns Fire Disasters 2020; 33:3-13. [PMID: 32523489 PMCID: PMC7263715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Accepted: 01/28/2020] [Indexed: 06/11/2023]
Abstract
The present study aims to document the epidemiologic features and outcomes of burn injuries in Southeastern Iran based on International Statistical Classification of Diseases and Related Health Problems, 10th Revision (ICD-10) guidelines. This retrospective cross-sectional study was carried out at Khatam-Al-Anbiya Hospital. Patient demographics, including burn injury data and outcome data were collected from medical records and analyzed through descriptive and analytical statistics using SPSS software. A total of 3,030 burn patients were included in this study. A total of 55% of the subjects were males. The largest age group included patients aged 15-44 (61%). The majority of burns were caused by flame (70.5%), and most of them were third-degree burns (73%). Mean affected total body surface area (TBSA) was 43.98%±30.75% in all subjects and 80.85%±21.41% in the deceased individuals. Most of the burns were accidental (66.2%), and 37% of them occurred in winter. Mean hospital stay was 4.49±4.67 days (within the range of 1-113 days). A quarter of all patients admitted to the hospital died (24.9%). The number of admitted patients, mean length of stay (LOS), and the mortality rate showed a decreasing trend from 2007 to 2016. In contrast, the total mortality rate was high. The significant predictors of mortality included being female, flame burns, longer LOS, a larger TBSA, burns of higher degrees, as well as burn complications. The documentation of burn data, based on ICD-10 directives, standardizes findings from burn injury analyses and leads to the comparability of data at different national and international levels.
Collapse
Affiliation(s)
- J. Alipour
- Health Promotion Research Center, Zahedan University of Medical Sciences, Zahedan, Iran
| | - Y. Mehdipour
- Health Information Technology Department, Paramedical School, Zahedan University of Medical Sciences, Zahedan, Iran
| | - A. Karimi
- Infectious Diseases and Tropical Medicine Research Center, Resistant Tuberculosis Institute, Zahedan University of Medical Sciences, Zahedan, Iran
| |
Collapse
|
18
|
Fallah H, Karimi A, Sadeghi A, Behroozi-Khazaei N. Modelling and optimizing of calcium and non-phytate phosphorus requirements of male broiler chickens from 1 to 21 days of age using response surface methodology. Animal 2020; 14:1598-1609. [PMID: 32216861 DOI: 10.1017/s1751731120000452] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
The skeleton is the main site of P and Ca deposition; therefore, accurate estimation of Ca and P requirements is necessary to maintaining health and optimum performance of broiler chickens. A response surface methodology (RSM) using a central composite design (CCD) was used for evaluating and optimizing of Ca and non-phytate P (NPP) requirements of broiler chickens for optimal performance, ileal nutrient digestibility and bone mineralization from 1 to 21 days of age. A total of 750 one-day-old male broiler chickens (Ross 308) were randomly distributed into 50 cages including 9 treatments, each replicated 5 times (except central treatment with 10 replicates) and 15 birds in each cage by CCD. The dietary Ca levels of 4.3, 5.6, 8.6, 11.7 and 13.0 g/kg and NPP of 2.5, 2.9, 4.0, 5.0 and 5.4 g/kg were used for nine treatments of CCD. The results indicated that the linear and quadratic effects of NPP, quadratic effects of Ca and Ca × NPP were significant for average weight gain (AWG, P < 0.05), average feed intake (AFI, P < 0.05), feed conversion ratio (FCR, P < 0.05) and Ca and P apparent ileal digestibility (AID, P < 0.05); however, the linear effect of Ca was significant only for FCR (P < 0.05). On the other hand, tibia and toe ash were affected by NPP (linear and quadratic, P < 0.01) and Ca (quadratic, P < 0.01). The second-order polynomial regression model was significant for AWG (R2 = 0.93, P < 0.001), AFI (R2 = 0.88, P < 0.001), FCR (R2 = 0.78, P < 0.001), AID of Ca (R2 = 0.78, P < 0.001) and P (R2 = 0.88, P < 0.001), tibia ash (R2 = 0.86, P < 0.001) and toe ash (R2 = 0.85, P < 0.001). The multi-objective optimization indicated that broiler chickens from 1 to 21 days of age need 7.03 and 4.47 g/kg of Ca and NPP, respectively, to achieve optimal AWG, FCR, tibia and toe ash. However, the dietary Ca and NPP levels can be reduced to 6.57 and 3.95 g/kg with a slight negative impact on performance and bone mineralization, respectively. In conclusion, the findings indicate that using multi-objective optimization model such as RSM provides more information regarding optimum Ca and NPP requirements of broiler chickens, considering the complex interaction between these two minerals. While the NPP levels are in line with current recommended requirements, Ca levels are considerably lower and suggest that current recommended Ca requirements may be in excess of the needs of the broiler.
Collapse
Affiliation(s)
- H Fallah
- Department of Animal Science, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| | - A Sadeghi
- Department of Animal Science, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| | - N Behroozi-Khazaei
- Department of Biosystems Engineering, Faculty of Agriculture, Pasdaran St., University of Kurdistan, Sanandaj66177-15175, Iran
| |
Collapse
|
19
|
Besharati S, Sadeghi A, Ahmadi F, Tajeddin E, Mohammad Salehi R, Fani F, Pouladfar G, Nikmanesh B, Majidpour A, Soleymanzadeh Moghadam S, Mirab Samiee S, Rahnamaye Farzami M, Rahbar M, Eslami P, Rakhshani N, Eshrati B, Gouya MM, Fallah F, Karimi A, Owlia P, Alebouyeh M. Serogroups, and drug resistance of nontyphoidal Salmonella in symptomatic patients with community-acquired diarrhea and chicken meat samples in Tehran. Iran J Vet Res 2020; 21:269-278. [PMID: 33584839 PMCID: PMC7871737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/25/2020] [Revised: 09/26/2020] [Accepted: 10/26/2020] [Indexed: 06/12/2023]
Abstract
BACKGROUND Salmonella is considered as a main cause of community-acquired diarrhea in humans, however, sources of the multi-drug resistant (MDR) strains and their link with the disease are not well known. AIMS This study aimed to investigate the frequency, serogroup diversity, and antimicrobial susceptibility patterns of Salmonella strains in poultry meat and stool samples of patients with community acquired diarrhea in Tehran. METHODS We compared the frequency of non-typhoidal Salmonella serogroups, the similarities of their resistance patterns to 10 antimicrobial compounds, the prevalence of extended spectrum β-lactamase (ESBL) and ampicillinase C (AmpC) genetic determinants, and class 1 and 2 integrons in 100 chicken meat and 400 stool samples of symptomatic patients in Tehran during June 2018 to March 2019. RESULTS Salmonella was isolated from 75% and 5.5% of the chicken meats and human stool samples, respectively. The chicken meat isolates mainly belonged to serogroup C (88%, 66/75), while the human stool isolates were mainly related to serogroup D (59.1%, 13/22). The MDR phenotype and the most common rates of resistance to antibiotics, including tetracycline, trimethoprim/sulfamethoxazole (TS) and azithromycin, were detected in 4.5% and 45.3%, 59% and 13.6%, 43% and 9.1%, 42% and 9.1% of the human stool and chicken meat samples, respectively. Carriage of bla CTX, bla SHV, and bla PER genes in the meat isolate with ESBL resistance phenotype and bla ACC, bla FOX, and bla CMY-2 among the 7 meat strains with AmpC resistance phenotype was not confirmed using polymerase chain reaction (PCR). High prevalence of class 1 and 2 integrons was characterized and showed a correlation with resistance to TS and chloramphenicol. CONCLUSION These findings showed a lack of association between chicken meats and human isolates due to discrepancy between the characterized serogroups and resistance phenotypes.
Collapse
Affiliation(s)
- S. Besharati
- MSc in Microbiology, Department of Microbiology, Faculty of Medicine, Shahed University, Tehran, Iran
| | - A. Sadeghi
- MSc in Microbiology, Department of Microbiology, Faculty of Medicine, Shahed University, Tehran, Iran
| | - F. Ahmadi
- MSc Student in Microbiology, Department of Microbiology, Faculty of Basic Sciences, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - E. Tajeddin
- MSc in Microbiology, Division of Microbiology, National Nutrition and Food Technology Research Institute, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - R. Mohammad Salehi
- Molecular Microbiology Research Center, Faculty of Medicine, Shahed University, Tehran, Iran
| | - F. Fani
- Division of Microbiology, Professor Alborzi Clinical Microbiology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Gh. Pouladfar
- Division of Microbiology, Professor Alborzi Clinical Microbiology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran
| | - B. Nikmanesh
- Department of Medical Laboratory Sciences, School of Allied Medical Sciences, Tehran University of Medical Sciences, Tehran, Iran
| | - A. Majidpour
- Division of Microbiology, Anti-Microbial Resistance Research Center, Institute of Immunology and Infectious Diseases (IIID), Iran University of Medical Sciences, Tehran, Iran
| | - S. Soleymanzadeh Moghadam
- MSc in Microbiology, Division of Microbiology, Anti-Microbial Resistance Research Center, Institute of Immunology and Infectious Diseases (IIID), Iran University of Medical Sciences, Tehran, Iran
| | - S. Mirab Samiee
- Health Reference Laboratory, Health Reference Laboratory Research Center, Ministry of Health and Medical Education, Tehran, Iran
| | - M. Rahnamaye Farzami
- Health Reference Laboratory, Health Reference Laboratory Research Center, Ministry of Health and Medical Education, Tehran, Iran
| | - M. Rahbar
- Health Reference Laboratory, Health Reference Laboratory Research Center, Ministry of Health and Medical Education, Tehran, Iran
| | - P. Eslami
- MSc in Microbiology, Department of Microbiology, Central Laboratory, Milad Hospital, Tehran, Iran
| | - N. Rakhshani
- Pathology Laboratory, Mehr Hospital, Tehran, Iran
| | - B. Eshrati
- Center for Communicable Disease Control, Ministry of Health and Medical Education, Tehran, Iran
| | - M. M. Gouya
- Center for Communicable Disease Control, Ministry of Health and Medical Education, Tehran, Iran
| | - F. Fallah
- Department of Microbiology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A. Karimi
- Pediatric Infections Research Center, Research Institute for Children’s Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - P. Owlia
- Molecular Microbiology Research Center, Faculty of Medicine, Shahed University, Tehran, Iran
- These authors contributed equally in this study
| | - M. Alebouyeh
- Pediatric Infections Research Center, Research Institute for Children’s Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
- These authors contributed equally in this study
| |
Collapse
|
20
|
Farhadi D, Karimi A, Sadeghi AA, Rostamzadeh J, Bedford MR. Effect of a high dose of exogenous phytase and supplementary myo-inositol on mineral solubility of broiler digesta and diets subjected to in vitro digestion assay. Poult Sci 2019; 98:3870-3883. [PMID: 30877748 DOI: 10.3382/ps/pez104] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2018] [Accepted: 03/01/2019] [Indexed: 11/20/2022] Open
Abstract
This study was conducted to evaluate the effect of microbial phytase and myo-inositol supplementation in low non-phytate phosphorus (nPP) diets on pH and the solubility of minerals in an in vitro digestion procedure (IVDP) and to compare this with digesta from birds fed different diets (grower diets) compared to the in vitro test (starter diets). A total of 660 1-day-old broilers were randomly allotted into 11 dietary treatments and fed a corn-soybean-meal-based diet with recommended nPP (positive control; PC), an nPP-deficient diet (negative control; NC), NC diets supplemented with phytase (500; 1,000; 2,000; 3,000; 4,000; 5,000; and 6,000 FTU/kg), an NC diet plus 0.15% myo-inositol, and an NC diet with reduced Ca level (Ca: nPP ratio same as PC) from 1 to 23 D of age. The pH and Ca solubility of the NC diet was increased compared with the PC when subjected to IVDP (P < 0.05). P solubility in the gizzard and jejunal digesta was reduced in the NC compared with the PC diet and this was also reflected in the IVDP. Phytase addition to the NC diets linearly increased (P < 0.05) the pH value and Ca and P solubilities in both digesta and diets subjected to IVDP. Higher doses of microbial phytase increased (P < 0.05) Zn and Fe solubilities in both digesta and IVDP. Myo-inositol supplementation of the NC diet had no effect on mineral solubility, but decreased (P < 0.05) the pH of the IVDP. Lowering the Ca content of the NC diet decreased (P < 0.05) the pH of the in vitro digested diets and Ca solubility in both broiler digesta and IVDP and also increased (P < 0.05) P solubility in both the jejunal digesta and IVDP. Correlations were noted between the solubility of P in the in vitro assay and that in the gizzard and jejunal digesta, and also with bird performance, confirms the usefulness of in vitro assay.
Collapse
Affiliation(s)
- D Farhadi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - A A Sadeghi
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - J Rostamzadeh
- Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj 66177-15175, Iran
| | - M R Bedford
- AB Vista Feed Ingredients, Marlborough, Wiltshire SN8 4AN, UK
| |
Collapse
|
21
|
Shahhosseini G, Karimi A, Amanpour S, Mansouri MA. Effect of Gamma Irradiation on Microbial Decontamination, Crude Nutrient Content, and Mineral Nutrient Composition of Laboratory Animal Diets. Arch Razi Inst 2019; 74:175-182. [PMID: 31232567 DOI: 10.22092/ari.2017.116153.1160] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 11/03/2017] [Accepted: 12/18/2017] [Indexed: 09/30/2022]
Abstract
Laboratory animal models are an important part of test design. Certain conditions such as microbial contamination in diets of these models could affect the results of experiments. One of the most important routes that predispose to contamination is generated through feeding of laboratory animals. This study aimed to show the effect of gamma irradiation in reducing bacteria concentrations, crude nutrient content, and concentrations of some minerals and trace elements in laboratory animal diets. Large-sized pellets with 10&ndash;15 mm diameter (commonly used for rats and hamsters) and small-sized pellets with 3&ndash;5 mm diameter (used for rabbits and guinea pigs) along with skimmed milk powder (SMP) as a food additive were exposed to gamma irradiation with different doses ranging from 3 to 30 kGy. The total microbial contamination and any possible changes in some mineral nutrient composition and the crude nutrient content were determined pre- and post-irradiation. Our data revealed that 25 kGy in pelleted diets and 18 kGy in SKM had superior effects in the reduction of bacterial contamination with little change in crude nutrient content and minerals and trace elements in nutrient requirements of laboratory animals. According to the results, gamma irradiation had minimal effects on crude nutrient content and the concentrations of some minerals and trace elements of laboratory animal diets, and it also eliminated bacterial and fungal contamination load. By using gamma irradiation, this method could yield a favorable outcome in controlling microbial contamination of animal diets.
Collapse
Affiliation(s)
- G Shahhosseini
- Nuclear Agriculture Research School, Nuclear Science and Technology Research Institute, Karaj, Iran
| | - A Karimi
- Department of Molecular Medicine, Faculty of Advanced Medical Sciences, Tabriz University of Medical Sciences, Tabriz, Iran.,Department of Molecular Medicine, Faculty of Advanced Medical Sciences, Tabriz University of Medical Sciences, Tabriz, Iran
| | - S Amanpour
- Cancer Biology Research Center, Tehran University of Medical Sciences, Tehran, Iran
| | - M A Mansouri
- Department of Research, Breeding and Production of Laboratory Animals, Razi Vaccine and Serum Research Institute, Agricultural Research, Education and Extension Organization, Karaj, Iran
| |
Collapse
|
22
|
Karimi A, Huang ZF, Paul MR. Erratum: Exploring spiral defect chaos in generalized Swift-Hohenberg models with mean flow [Phys. Rev. E 84, 046215 (2011)]. Phys Rev E 2019; 99:039901. [PMID: 30999484 DOI: 10.1103/physreve.99.039901] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2019] [Indexed: 11/07/2022]
Abstract
This corrects the article DOI: 10.1103/PhysRevE.84.046215.
Collapse
|
23
|
Fallah H, Karimi A, Sadeghi GH, Behroozi-Khazaei N. The effects of calcium source and concentration on performance, bone mineralisation and serum traits in male broiler chickens from 1 to 21 days of age. Anim Prod Sci 2019. [DOI: 10.1071/an18166] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
In total, 840 1-day-old male broiler chickens (Ross 308) were used to evaluate the effects of seven dietary calcium (Ca) concentrations (4.0, 5.5, 7.0, 8.5, 10.0, 11.5 and 13.0 g/kg, at a fixed concentration of 4.0 g/kg of non-phytate phosphorus) and two calcium sources (oyster shell and limestone) on broiler chicken Ca requirements for optimal growth rate and bone mineralisation from 1 to 21 days of age. All chickens were randomly distributed into 14 treatment groups (seven treatments of each Ca source), each being replicated four times, with 15 birds per each replicate. Results indicated that Ca source and Ca source × Ca concentration interaction had no significant (P > 0.05) effects on birds average feed intake, but increasing Ca concentration to >8.5 g/kg significantly deteriorated average feed intake. Average weight gain and feed conversion ratio were significantly influenced by Ca source × Ca concentration interaction, whereby high concentrations of Ca from oyster shell resulted in a poorer performance for both criteria than did those from limestone. Serum Ca, P and total protein were not affected by Ca source. However, increasing Ca concentrations had adverse effects on serum P concentration (P < 0.05). Toe ash, tibia ash and phosphorus concentrations at 21 days were not influenced by Ca source, but were depressed as dietary Ca concentration increased (P < 0.05). A broken-line regression analysis indicated that the Ca requirements to optimise average weight gain and tibia ash when limestone was used as a Ca source were 5.54 and 6.58 g/kg of diet respectively, and 5.80 and 6.43 g/kg of diet respectively, when oyster shell was used. In conclusion, the results indicated that Ca concentration, more than Ca source, has a significant influence on broiler chicken performance and bone mineralisation, all of which deteriorate when the dietary Ca concentration exceeds 8.5 g/kg at the constant available-phosphorus concentration of 4.0 g/kg.
Collapse
|
24
|
Akrami F, Zali A, Abbasi M, Majdzadeh R, Karimi A, Fadavi M, Mehrabi Bahar A. An ethical framework for evaluation of public health plans: a systematic process for legitimate and fair decision-making. Public Health 2018; 164:30-38. [PMID: 30170266 PMCID: PMC7118744 DOI: 10.1016/j.puhe.2018.07.018] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2017] [Revised: 06/08/2018] [Accepted: 07/14/2018] [Indexed: 01/26/2023]
Abstract
OBJECTIVES Given the increasing threats of communicable and non-communicable diseases, it is necessary for policy-makers and public health (PH) professionals to address ethical issues in health policies and plans. This study aimed to develop a practical framework for the ethical evaluation of PH programs. STUDY DESIGN A multidisciplinary team developed an ethical framework to evaluate PH plans from 2015 to 2017. METHODS In this study, the multi-method approach was used. First, a list of moral norms in PH policy and practice was drafted and completed in two interactive sessions. Then, the Delphi method was used for consensus about the structural components to be adopted in the framework. After developing the framework, its efficiency was assessed by evaluating Iran's Fourth Strategic Plan for HIV/AIDS Prevention and Control. RESULTS The framework was developed in the following three sections: (i) determination of the general moral norms in PH practice and policy; (ii) five steps of evaluation; and (iii) a procedural evaluation step to ensure fair decision-making. The ratio of the ethical points of the PH plan increased by 46% after implementation of the framework, and the frequency of ethical points increased significantly after applying the framework (P = 0.001). CONCLUSION The application of the framework for the ethical evaluation of various PH programs ensures a comprehensive and scientific-deliberative decision-making process, while also contributing to the development of the framework.
Collapse
Affiliation(s)
- F Akrami
- Medical Ethics and Law Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
| | - A Zali
- Functional Neurosurgery Research Center, Shohada Tajrish Neurosurgical Center of Excellence, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - M Abbasi
- Medical Ethics and Law Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - R Majdzadeh
- Community Based Participatory Research Center and Knowledge Utilization Research Center, Tehran University of Medical Sciences, Tehran, Iran
| | - A Karimi
- Faculty of Law and Political Science, University of Tehran, Tehran, Iran
| | - M Fadavi
- Medical Ethics Department, Faculty of Traditional Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A Mehrabi Bahar
- School of Public Health, Tehran University of Medical Sciences, Tehran, Iran
| |
Collapse
|
25
|
Löfling L, Bahmanyar S, Karimi A, Kieler H, Lambe M, Lamberg Lundström K, Sandin F, Wagenius G. Survival in never-smokers with non-small cell lung cancer: A population-based study from Sweden. Ann Oncol 2018. [DOI: 10.1093/annonc/mdy291.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
|
26
|
Karimi A, Zarifkar A, Miri M. Design of ultracompact tunable fractional-order temporal differentiators based on hybrid-plasmonic phase-shifted Bragg gratings. Appl Opt 2018; 57:7402-7409. [PMID: 30182963 DOI: 10.1364/ao.57.007402] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2018] [Accepted: 07/25/2018] [Indexed: 06/08/2023]
Abstract
The design and the simulation of tunable fractional-order temporal differentiators based on Si-hybrid plasmonic phase-shifted Bragg gratings are proposed in this paper, where strong light confinement in the hybrid plasmonic waveguide is employed to significantly reduce the overall length of the differentiators. According to 2D- and 3D-FDTD simulation results, the proposed structures with overall lengths of less than 8 μm can provide arbitrary differentiation order and differentiation bandwidths as high as 1.6 THz. The differentiation order and the bandwidth of the proposed structures can be tuned in relatively wide ranges by changing the geometrical parameters of the structures. For example, the differentiation order can be changed from 0.57 to 0.97 by changing the number of the Bragg grating periods in a 3D differentiator structure. Furthermore, it is shown that using an electro-optical polymer as the low-index material of the hybrid plasmonic waveguide, the differentiation order and the central frequency of the proposed differentiators can be actively tuned through applying a proper actuating electrical field (voltage) to the structure. This property, along with the ultracompact footprint and wide bandwidth of the proposed differentiators, suggest their application in ultrafast all-optical signal-processing systems.
Collapse
|
27
|
Gitoee A, Sadeghi G, Karimi A. Combination Effects of Organic and Inorganic Chromium on Production Performance, Reproductive Response, Immune Status, and Maternal Antibody Transmission in Breeder Quails Under Heat Stress. Biol Trace Elem Res 2018; 184:508-516. [PMID: 29181821 DOI: 10.1007/s12011-017-1205-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/15/2017] [Accepted: 11/15/2017] [Indexed: 01/02/2023]
Abstract
This experiment was carried out to investigate the combination effects of organic and inorganic chromium (Cr) on egg production, egg quality, reproductive response, and immune status of breeder quails and their offspring under heat stress. A total of 140 7-week-old Japanese breeder quails (120 females and 20 males) according to a completely randomized design were used in four treatment groups (five replicate and seven birds per each) lasted for 8 weeks. Quails exposed to 35 °C for 8 h/day for induction of cyclic heat stress treatments consisted of diets supplemented with (1) 1 mg CrCl3 per kilogram of diet as control (CNT); (2) 1 mg Cr-L-Met per kilogram of diet as organic Cr (OCr); (3) 0.5 mg CrCl3 plus 0.5 mg Cr-L-Met per kilogram of diet (ISO); (4) 1 mg CrCl3 plus 0.5 mg Cr-L-Met per kilogram of diet (On-top). Productive performance and egg quality parameters were determined weekly. Fertility, hatchability, and embryonic mortality were measured at the end of experiment. Humoral immunity was assessed by primary and secondary antibody titer in sheep red blood cells (SRBC) and Newcastle disease (ND) tests. Cell-mediated immunity was assessed by the cutaneous basophil hypersensitivity (CBH) test to phytohemagglutinin (PHA) at days 20 and 45 of age. White blood cell count and immunoglobulin Y (IgY) content in serum and yolk of breeders and in serum and yolk residues of offspring were also measured. Results showed that maximum egg production, egg shell thickness, and Haugh unit were observed in birds fed ISO and On-top diets (P ≤ 0.05). The highest (P ≤ 0.05) antibody levels in ND test were observed in birds fed with OCr, ISO, and On-top diets. The highest cellular response (P ≤ 0.05) was in 12 h after primary PHA injection and 12 and 24 h after secondary PHA injection in birds fed with On-top diets. The highest count of heterophil and (H/L) were gained in breeder quails fed with CNT diet, and the lowest of them were reached with On-top diet (P ≤ 0.05). Results showed that the highest IgY level in serum of breeder and their offspring and that of yolk suck and egg yolk were observed in birds fed with On-top diet (P ≤ 0.05). These results suggest that extra supplemental organic Cr in combination with CrCl3 could lead to higher egg production, egg quality, and immune status of breeder quails and their offspring.
Collapse
Affiliation(s)
- A Gitoee
- Department of Animal Science, Faculty of Agriculture University of Kurdistan, Sanandaj, Iran
| | - Gh Sadeghi
- Department of Animal Science, Faculty of Agriculture University of Kurdistan, Sanandaj, Iran.
| | - A Karimi
- Department of Animal Science, Faculty of Agriculture University of Kurdistan, Sanandaj, Iran
| |
Collapse
|
28
|
Momeneh T, Karimi A, Sadeghi G, Vaziry A, Bedford M. Evaluation of dietary calcium level and source and phytase on growth performance, serum metabolites, and ileum mineral contents in broiler chicks fed adequate phosphorus diets from one to 28 days of age. Poult Sci 2018; 97:1283-1289. [DOI: 10.3382/ps/pex432] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2017] [Accepted: 12/23/2017] [Indexed: 11/20/2022] Open
|
29
|
Samimi A, Tajik J, Aghamiri S, Karimi A. A serial evaluation of electrocardiographic indices and cardiac arrhythmias during pregnancy, lactation and dry periods in Saanen goats. BJVM 2018. [DOI: 10.15547/bjvm.1010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
|
30
|
Fallahi S, Moosavi SF, Karimi A, Chegeni AS, Saki M, Namdari P, Rashno MM, Varzi AM, Tarrahi MJ, Almasian M. An advanced uracil DNA glycosylase-supplemented loop-mediated isothermal amplification (UDG-LAMP) technique used in the sensitive and specific detection of Cryptosporidium parvum, Cryptosporidium hominis, and Cryptosporidium meleagridis in AIDS patients. Diagn Microbiol Infect Dis 2017; 91:6-12. [PMID: 29366630 DOI: 10.1016/j.diagmicrobio.2017.12.017] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2017] [Revised: 12/15/2017] [Accepted: 12/16/2017] [Indexed: 11/18/2022]
Abstract
The rapid and accurate detection of Cryptosporidium spp. is critically important for the prevention and timely treatment of cryptosporidiosis in AIDS patients (APs). This study was conducted to examine a UDG-LAMP technique for the first time to diagnose cryptosporidiosis in APs. After collecting demographic and clinical data, three stool samples were collected from the participants (120 volunteering APs). The microscopic examination of stained smears using the acid-fast method and the UDG-LAMP assay were performed for each sample. 10% of APs were infected with Cryptosporidium spp. The number of detected cryptosporidiosis cases using the acid-fast staining and UDG-LAMP methods were significantly different (P < 0.001). Diarrhea and weight loss were found to be significantly associated with cryptosporidiosis in patients (P < 0.05). The pretreatment of LAMP reagents with UDG successfully eliminated the likelihood of product re-amplification remaining from previous reactions. The UDG-LAMP technique could detect cryptosporidiosis in APs with high sensitivity and rapidity without carryover contamination.
Collapse
Affiliation(s)
- Shirzad Fallahi
- Razi Herbal Medicine Research Center, Lorestan University of Medical Sciences, Khorramabad, Iran; Department of Medical Parasitology and Mycology, Faculty of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran.
| | - Seyedeh Fatemeh Moosavi
- Department of Medical Parasitology and Mycology, Faculty of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Azadeh Karimi
- Department of Medical Parasitology and Mycology, Faculty of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Ali Sharafi Chegeni
- Department of Communicable Disease Control and Prevention, Deputy of Health, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Mohammad Saki
- Department of Communicable Disease Control and Prevention, Deputy of Health, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Parsa Namdari
- Medical Student, Faculty of Medicine, University of Debrecen, Hungary
| | | | - Ali Mohamad Varzi
- Department of Immunology, Faculty of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| | - Mohammad Javad Tarrahi
- Department of Epidemiology and Statistics, Behavioral Sciences Research Center, Isfahan University of Medical Science, Isfahan, Iran
| | - Mohammad Almasian
- School of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
| |
Collapse
|
31
|
Karimi A, Tulloch AIT, Brown G, Hockings M. Understanding the effects of different social data on selecting priority conservation areas. Conserv Biol 2017; 31:1439-1449. [PMID: 28425128 DOI: 10.1111/cobi.12947] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2016] [Revised: 02/21/2017] [Accepted: 04/13/2017] [Indexed: 06/07/2023]
Abstract
Conservation success is contingent on assessing social and environmental factors so that cost-effective implementation of strategies and actions can be placed in a broad social-ecological context. Until now, the focus has been on how to include spatially explicit social data in conservation planning, whereas the value of different kinds of social data has received limited attention. In a regional systematic conservation planning case study in Australia, we examined the spatial concurrence of a range of spatially explicit social values and land-use preferences collected using a public participation geographic information system and biological data. We used Zonation to integrate the social data with the biological data in a series of spatial-prioritization scenarios to determine the effect of the different types of social data on spatial prioritization compared with biological data alone. The type of social data (i.e., conservation opportunities or constraints) significantly affected spatial prioritization outcomes. The integration of social values and land-use preferences under different scenarios was highly variable and generated spatial prioritizations 1.2-51% different from those based on biological data alone. The inclusion of conservation-compatible values and preferences added relatively few new areas to conservation priorities, whereas including noncompatible economic values and development preferences as costs significantly changed conservation priority areas (48.2% and 47.4%, respectively). Based on our results, a multifaceted conservation prioritization approach that combines spatially explicit social data with biological data can help conservation planners identify the type of social data to collect for more effective and feasible conservation actions.
Collapse
Affiliation(s)
- Azadeh Karimi
- School of Earth and Environmental Sciences, University of Queensland, Brisbane, QLD, 4072, Australia
- Department of Environmental Sciences, Faculty of Natural Resources and Environmental Sciences, Ferdowsi University of Mashhad, Mashhad, 9177948974, Iran
| | - Ayesha I T Tulloch
- School of Earth and Environmental Sciences, University of Queensland, Brisbane, QLD, 4072, Australia
| | - Greg Brown
- School of Earth and Environmental Sciences, University of Queensland, Brisbane, QLD, 4072, Australia
| | - Marc Hockings
- School of Earth and Environmental Sciences, University of Queensland, Brisbane, QLD, 4072, Australia
| |
Collapse
|
32
|
Tajbakhsh M, Karimi A, Fallah F, Akhavan MM. Overview of ribosomal and non-ribosomal antimicrobial peptides produced by Gram positive bacteria. ACTA ACUST UNITED AC 2017; 63:20-32. [PMID: 29096754 DOI: 10.14715/cmb/2017.63.10.4] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2017] [Indexed: 11/18/2022]
Abstract
The increasing incidence of antimicrobial resistance bacterial infection and decreasing effectiveness of conventional antibiotics to treatment have caused serious problems worldwide. The demand for new generationantibiotics to combat microbial pathogens is imperative. Cationic antimicrobial peptides (AMPs) with different sources from prokaryotic to complex eukaryotic organisms, with variable length, amino acid composition and secondary structure, have been consideredduring the past decades. The advantages of large number of AMPs are related to broad spectrum and morphogenetic activities, low resistance rate among microorganismswithout side effect on human cells, rapid killing of bacteria via membrane damage and intracellular targets,and their critical roles in anti-inflammatory. Ribosomal synthesized peptides of Gram positive bacteria with various post translational modificationsrepresent extended types of antimicrobial peptide with different structural and functional diversity. These types of peptides have been considered as new therapeutic agents for pharmaceutical development .In addition, non- ribosomal synthesized peptides are a wide range of peptides , an extremely extensive range of biological activities and pharmacological properties that are not synthesized by ribosomes, show interesting biological properties ranging from antibiotic to bio surfactants. This review focused on genetics, mechanism of action and modifications, resistance mode of Gram positive bacteria to AMPs and the biotechnological application of ribosomally and non-ribosomally synthesized peptides derived from Gram positive bacteria.
Collapse
Affiliation(s)
- M Tajbakhsh
- Pediatric Infections Research Center (PIRC), Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A Karimi
- Pediatric Infections Research Center (PIRC), Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - F Fallah
- Pediatric Infections Research Center (PIRC), Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - M M Akhavan
- Skin Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| |
Collapse
|
33
|
Mirkeshavarz M, Ganjibakhsh M, Aminishakib P, Farzaneh P, Mahdavi N, Vakhshiteh F, Karimi A, Gohari NS, Kamali F, Kharazifard MJ, Shahzadeh Fazeli SA, Nasimian A. Interleukin-6 secreted by oral cancer- associated fibroblast accelerated VEGF expression in tumor and stroma cells. Cell Mol Biol (Noisy-le-grand) 2017; 63:131-136. [DOI: 10.14715/cmb/2017.63.10.21] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Revised: 09/20/2017] [Accepted: 09/25/2017] [Indexed: 11/18/2022]
|
34
|
Farhadi D, Karimi A, Sadeghi G, Rostamzadeh J, Bedford M. Effects of a high dose of microbial phytase and myo-inositol supplementation on growth performance, tibia mineralization, nutrient digestibility, litter moisture content, and foot problems in broiler chickens fed phosphorus-deficient diets. Poult Sci 2017; 96:3664-3675. [DOI: 10.3382/ps/pex186] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2016] [Accepted: 06/14/2017] [Indexed: 11/20/2022] Open
|
35
|
|
36
|
Karimi A, Joukar S, Najafipour H, Masoumi-Ardakani Y, Shahouzehi B. Low-intensity endurance exercise plus nandrolone decanoate modulates cardiac adiponectin and its receptors. ACTA ACUST UNITED AC 2017; 37:29-33. [PMID: 28544314 DOI: 10.1111/aap.12056] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2016] [Revised: 02/17/2017] [Accepted: 03/07/2017] [Indexed: 12/12/2022]
Abstract
Vast adverse effects of anabolic-androgenic steroids (AASs) on athletes' cardiovascular systems have been reported. However, there is still a lack of adequate information regarding the pathways and mechanisms involved. We tested the hypothesis that adiponectin and its receptors in the heart may be affected by long-term use of AASs alongside exercising. Male Wistar rats were randomized into the control (CTL), exercise (EX), nandrolone (Nan), arachis (Arach) group which treated with arachis as vehicle, trained vehicle (EX+Arach) and trained nandrolone (EX+Nan) groups that were treated for 8 weeks. One day after the end of the protocol, animals were sacrificed and their hearts were frozen. TNF-α and adiponectin proteins of hearts were evaluated quantitatively by ELISA kits, and Western blot analysis was used for measuring adiponectin receptor protein expression. TNF-α protein increased significantly in the EX+Nan group (P<.05 vs CTL group). The AdipoR1 protein was significantly higher in the presence of nandrolone alongside exercise (P<.05 vs Nan and EX+Arach groups, P<.01 vs CTL and Arach groups). In addition, AdipoR2 protein enhanced in the EX+Nan group when compared with the other groups (P<.05 vs EX and EX+Arach groups, P<.01 vs CTL, Arach and Nan groups). Chronic nandrolone plus mild endurance exercise may be associated with imbalance in pro-/anti-inflammatory cytokines and may induce a positive modulatory effect on cardiac adiporeceptors in rat. Further studies are required before these findings can be generalized to humans.
Collapse
Affiliation(s)
- A Karimi
- Physiology Research Center, Institute of Neuropharmacology, Kerman University of Medical Sciences, Kerman, Iran
| | - S Joukar
- Cardiovascular Research Center, Institute of Basic and Clinical Physiology Sciences, Kerman University of Medical Sciences, Kerman, Iran.,Department of Physiology and Pharmacology, School of Medicine, Kerman University of Medical Sciences, Kerman, Iran
| | - H Najafipour
- Physiology Research Center, Institute of Neuropharmacology, Kerman University of Medical Sciences, Kerman, Iran
| | - Y Masoumi-Ardakani
- Physiology Research Center, Institute of Neuropharmacology, Kerman University of Medical Sciences, Kerman, Iran
| | - B Shahouzehi
- Physiology Research Center, Institute of Neuropharmacology, Kerman University of Medical Sciences, Kerman, Iran
| |
Collapse
|
37
|
Karami N, Karimi A, Aliahmadi A, Mirzajan F, Rezadoost H, Ghassempour A, Fallah F. Identification of bacteria using volatile organic compounds. Cell Mol Biol (Noisy-le-grand) 2017; 63:112-121. [DOI: 10.14715/cmb/2017.63.2.18] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2017] [Accepted: 03/19/2017] [Indexed: 11/18/2022]
|
38
|
Fallah F, Karimi A, Abdolghafoorian H, Mohammadzadeh A, Zahraei SM, Goudarzi H, Fallah M. Molecular analysis of the bacille Calmette-Guérin vaccine strain currently being used in Iran. Int J Tuberc Lung Dis 2017; 20:223-7. [PMID: 26792475 DOI: 10.5588/ijtld.15.0434] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND In developing countries, tuberculosis (TB) infection control remains a challenge. The bacille Calmette-Guérin (BCG) vaccine is the only effective vaccine available for TB control. Iran uses a local BCG vaccine strain with an unknown substrain. OBJECTIVE To investigate the molecular characteristics of the current BCG strain being used in Iran using comparative genomics of the evolutionarily late strains, including BCG vaccines Pasteur, BCG-Danish, BCG-Glaxo, BCG-Prague, BCG-Frappier, BCG-Connaught and BCG-Moreau. METHODS A total of 67 different vials of BCG vaccine were cultured. DNA was extracted using the modified cetrimonium bromide (CTAB) method, and multiplex polymerase chain reaction (PCR) was performed to determine four target genomic regions of difference (RD) 1, RD8, RD16 and SenX3-RegX3, and to see whether RD2 and RD14 were present. RESULTS Our results showed that all studied batches were Mycobacterium bovis; molecular analysis revealed that the Iranian vaccine strains possess RD8, RD16 and SenX3-RegX3 regions but not RD1, RD2 and RD14. All of the vaccine batches analysed were compatible with BCG-Pasteur 1173p2, the original strain. CONCLUSION All of the BCG strains studied were recognised as the BCG-Pasteur 1173p2 strain. No genetic diversity among stocks and ready-for-use vaccine vials were detected.
Collapse
Affiliation(s)
- F Fallah
- Paediatric Infections Research Centre, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A Karimi
- Paediatric Infections Research Centre, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | | | - A Mohammadzadeh
- Department of Microbiology, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - S M Zahraei
- Center for Communicable Diseases Control, Ministry of Health and Medical Education, Tehran, Iran
| | - H Goudarzi
- Department of Microbiology, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - M Fallah
- School of Traditional Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| |
Collapse
|
39
|
Farhadi D, Karimi A, Sadeghi G, Sheikhahmadi A, Habibian M, Raei A, Sobhani K. Effects of using eucalyptus ( Eucalyptusglobulus L.) leaf powder and its essential oil on growth performance and immune response of broiler chickens. Iran J Vet Res 2017; 18:60-62. [PMID: 28588635 PMCID: PMC5454581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 11/24/2015] [Revised: 10/18/2016] [Accepted: 10/19/2016] [Indexed: 06/07/2023]
Abstract
The aim of this study was to evaluate the effects of eucalyptus leaf powder (ELP) and eucalyptus essential oil (EEO) on growth performance and immune response of broiler chickens. A total of 160 broiler chicks were assigned randomly into five dietary treatments from 7-42 days of age. Dietary treatments included: a control diet, control diets plus 1,000 or 3,000 mg/kg of ELP, and control diets plus 250 or 500 mg/kg of EEO. Dietary inclusion of ELP decreased body weight gain (BWG) during 7-28 days of age. Broilers fed diet containing 3,000 mg/kg of ELP had lower feed intake (FI) during 7-28 days compared to the other treatments. Broilers fed ELP or EEO had greater primary antibody response to sheep red blood cells (SRBC) compared to the control, but differences in secondary antibody response were not significant. In conclusion, dietary EEO has the potential to enhance immune response of broiler chickens.
Collapse
Affiliation(s)
| | - A. Karimi
- Correspondence: A. Karimi, Department of Animal Science, Faculty of Agriculture, University of Kurdistan, Sanandaj, Iran. E-mail:
| | | | | | | | | | | |
Collapse
|
40
|
Shabani S, Karimi A, Rashki A, Meshkinkhood N, Niknam F, Poursharif A, Mahboudi F, Djadid ND. Identification and evaluation expression level of arrestin 1 gene during the development stage of Anopheles stephensi. Gene Reports 2016. [DOI: 10.1016/j.genrep.2016.09.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
|
41
|
Najafi M, Jahangiry L, Mortazavi H, Jalali A, Karimi A, Bozorgi A. Outcomes and long-term survival of patients undergoing coronary artery bypass graft surgery; the controversial role of opium as a risk marker. J Cardiothorac Vasc Anesth 2016. [DOI: 10.1053/j.jvca.2016.03.030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
|
42
|
Fallah S, Karimi A, Panahi G, Gerayesh Nejad S, Fadaei R, Seifi M. Human colon cancer HT-29 cell death responses to doxorubicin and Morus Alba leaves flavonoid extract. Cell Mol Biol (Noisy-le-grand) 2016; 62:72-77. [PMID: 27064876] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2016] [Accepted: 03/24/2016] [Indexed: 06/05/2023]
Abstract
The mechanistic basis for the biological properties of Morus alba flavonoid extract (MFE) and chemotherapy drug of doxorubicin on human colon cancer HT-29 cell line death are unknown. The effect of doxorubicin and flavonoid extract on colon cancer HT-29 cell line death and identification of APC gene expression and PARP concentration of HT-29 cell line were investigated. The results showed that flavonoid extract and doxorubicin induce a dose dependent cell death in HT-29 cell line. MFE and doxorubicin exert a cytotoxic effect on human colon cancer HT-29 cell line by probably promoting or induction of apoptosis.
Collapse
Affiliation(s)
- S Fallah
- Iran University of Medical Sciences Department of Biochemistry, Faculty of Medicine Tehran Iran
| | - A Karimi
- Tehran University of Medical Sciences Department of Biochemistry Tehran Iran
| | - G Panahi
- Tehran University of Medical Sciences Department of Biochemistry Tehran Iran
| | - S Gerayesh Nejad
- Tehran University of Medical Sciences Department of Biochemistry Tehran Iran
| | - R Fadaei
- Iran University of Medical Sciences Department of Biochemistry, Faculty of Medicine Tehran Iran
| | - M Seifi
- University of Alberta Department of Medical Genetics, Faculty of Medicine and Dentistry Edmonton Canada
| |
Collapse
|
43
|
Kakavand T, Mirzaii M, Eslami M, Karimi A. Nuclear model calculation and targetry recipe for production of 110mIn. Appl Radiat Isot 2015; 104:60-6. [DOI: 10.1016/j.apradiso.2015.06.022] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2014] [Revised: 05/31/2015] [Accepted: 06/16/2015] [Indexed: 11/26/2022]
|
44
|
Ghanaie R, Sadeghi H, Esteghamati A, Fallah F, Armin S, Fahimzad S, Ghanaie M, Shamshiri A, Shiva F, Karimi A. Frequency of pertussis in iranian school-age children. J PEDIAT INF DIS-GER 2015. [DOI: 10.3233/jpi-130380] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Affiliation(s)
- R.M. Ghanaie
- Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - H. Sadeghi
- Division of Pediatric Pulmonology, Columbia University, New York, NY, USA
| | - A. Esteghamati
- Department of Pediatrics, Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - F. Fallah
- Department of Clinical Microbiology, Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Sh. Armin
- Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - S.A. Fahimzad
- Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | | | - A. Shamshiri
- Department of Biostatistics, Tehran University of Medical Sciences, Tehran, Iran
| | - F. Shiva
- Department of Pediatrics, Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - A. Karimi
- Pediatric Infections Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| |
Collapse
|
45
|
Hanafi-Bojd AA, Rassi Y, Yaghoobi-Ershadi MR, Haghdoost AA, Akhavan AA, Charrahy Z, Karimi A. Predicted Distribution of Visceral Leishmaniasis Vectors (Diptera: Psychodidae; Phlebotominae) in Iran: A Niche Model Study. Zoonoses Public Health 2015; 62:644-54. [DOI: 10.1111/zph.12202] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2014] [Indexed: 01/30/2023]
Affiliation(s)
- A. A. Hanafi-Bojd
- Department of Medical Entomology & Vector Control; School of Public Health; Tehran University of Medical Sciences; Tehran Iran
| | - Y. Rassi
- Department of Medical Entomology & Vector Control; School of Public Health; Tehran University of Medical Sciences; Tehran Iran
| | - M. R. Yaghoobi-Ershadi
- Department of Medical Entomology & Vector Control; School of Public Health; Tehran University of Medical Sciences; Tehran Iran
| | - A. A. Haghdoost
- School of Public Health; Kerman University of Medical Sciences; Kerman Iran
| | - A. A. Akhavan
- Department of Medical Entomology & Vector Control; School of Public Health; Tehran University of Medical Sciences; Tehran Iran
| | - Z. Charrahy
- Open Training Center; School of Geography; Tehran University; Tehran Iran
| | - A. Karimi
- Department of Medical Entomology & Vector Control; School of Public Health; Tehran University of Medical Sciences; Tehran Iran
| |
Collapse
|
46
|
Fatemeh F, Karimi A, Abbassion M, Rad PK, Yazdi MK. Extraction of Rosa damascena as an antibacterial agent. Int J Mycobacteriol 2015. [DOI: 10.1016/j.ijmyco.2014.11.053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
|
47
|
Ali Moghaddam K, Vaezi M, Karimi A, Jahani M, Namroud N, Ghavamzadeh A. Post-HSCT Fertility in Patients Receiving Non-TBI-Based Conditioning Regimen: A 23-Year of Iranian Experience. Biol Blood Marrow Transplant 2015. [DOI: 10.1016/j.bbmt.2014.11.259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
|
48
|
Abstract
Bacteria in natural and artificial environments often reside in self-organized, integrated communities known as biofilms. Biofilms are highly structured entities consisting of bacterial cells embedded in a matrix of self-produced extracellular polymeric substances (EPS). The EPS matrix acts like a biological 'glue' enabling microbes to adhere to and colonize a wide range of surfaces. Once integrated into biofilms, bacterial cells can withstand various forms of stress such as antibiotics, hydrodynamic shear and other environmental challenges. Because of this, biofilms of pathogenic bacteria can be a significant health hazard often leading to recurrent infections. Biofilms can also lead to clogging and material degradation; on the other hand they are an integral part of various environmental processes such as carbon sequestration and nitrogen cycles. There are several determinants of biofilm morphology and dynamics, including the genotypic and phenotypic states of constituent cells and various environmental conditions. Here, we present an overview of the role of relevant physical processes in biofilm formation, including propulsion mechanisms, hydrodynamic effects, and transport of quorum sensing signals. We also provide a survey of microfluidic techniques utilized to unravel the associated physical mechanisms. Further, we discuss the future research areas for exploring new ways to extend the scope of the microfluidic approach in biofilm studies.
Collapse
Affiliation(s)
- A. Karimi
- Department of Mechanical and Industrial Engineering, Northeastern University, Boston, MA 02115
- Department of Aerospace and Mechanical Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
| | - D. Karig
- Research and Exploratory Development Department, Johns Hopkins University Applied Physics Laboratory, Laurel, MD 20723
| | - A. Kumar
- Department of Mechanical Engineering, University of Alberta, Edmonton, Canada AB T6G 2G8
| | - A. M. Ardekani
- School of Mechanical Engineering, Purdue University, West Lafayette, IN 47907
- Department of Aerospace and Mechanical Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
| |
Collapse
|
49
|
Bazyar J, Daliri S, Sayehmiri K, Karimi A, Delpisheh A. Assessing the relationship between maternal and neonatal factors and low birth weight in Iran; a systematic review and meta-analysis. J Med Life 2015; 8:23-31. [PMID: 28316702 PMCID: PMC5319292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2015] [Accepted: 12/17/2015] [Indexed: 11/25/2022] Open
Abstract
Introduction. Low birth weight is an important indicator of the health of babies. A low birth weight is a leading health problem and a major reason for death in newborns. This study targeted to assess the relationship between maternal and infant factors and low birth weight in Iran through a systematic review and meta-analysis. Materials and Methods. This paper was a systematic review and meta-analysis of the relationship between maternal/ infant factors and low birth weight based on the published research papers conducted in Iran. To achieve this goal, two trained researchers independently elicited all the relevant articles by using the appropriate keywords and their combinations in SID, Madlib, Iranmedex, Irandoc, Google Scholar, Pubmed, ISI, Scopus and Magiran databases. The results of the study were combined with SPSS 20 and STATA software. Results. In the initial stage, 25 more relevant articles out of 46 papers were selected. The gestational age with less than 37 weeks and prenatal care had the most (CI: 27- 14. 53, OR: 19.81) and the least (CI: 1.86, OR: 1.5) effect on the low birth weight in newborns, respectively. Conclusion. This study showed that there is a significant relationship between the low birth weight and multiple births, pre-eclampsia, maternal weight gaining during pregnancy, baby's gender, and pregnancy age. Hence, controlling the factors above in mothers during pregnancy by the health authorities could lead to the birth of infants with a healthy weight and consequently the number of infants with low birth weight will decrease.
Collapse
Affiliation(s)
- J Bazyar
- Student Research Committee, Faculty of Health, Ilam University of Medical Sciences, Ilam, Iran
| | - S Daliri
- Student Research Committee, Faculty of Health, Ilam University of Medical Sciences, Ilam, Iran
| | - K Sayehmiri
- Department of Biostatistics, Psychosocial Injury Prevention Research Center, Tehran University of Medical Sciences, Ilam, Iran
| | - A Karimi
- Student Research Committee, Faculty of Health, Ilam University of Medical Sciences, Ilam, Iran
| | - A Delpisheh
- Faculty of Medicine, Ilam University of Medical Sciences, Ilam, Iran
| |
Collapse
|
50
|
Abstract
We numerically study the effect of solid boundaries on the swimming behavior of a motile microorganism in viscoelastic media. Understanding the swimmer-wall hydrodynamic interactions is crucial to elucidate the adhesion of bacterial cells to nearby substrates which is precursor to the formation of the microbial biofilms. The microorganism is simulated using a squirmer model that captures the major swimming mechanisms of potential, extensile, and contractile types of swimmers, while neglecting the biological complexities. A Giesekus constitutive equation is utilized to describe both viscoelasticity and shear-thinning behavior of the background fluid. We found that the viscoelasticity strongly affects the near-wall motion of a squirmer by generating an opposing polymeric torque which impedes the rotation of the swimmer away from the wall. In particular, the time a neutral squirmer spends at the close proximity of the wall is shown to increase with polymer relaxation time and reaches a maximum at Weissenberg number of unity. The shear-thinning effect is found to weaken the solvent stress and therefore, increases the swimmer-wall contact time. For a puller swimmer, the polymer stretching mainly occurs around its lateral sides, leading to reduced elastic resistance against its locomotion. The neutral and puller swimmers eventually escape the wall attraction effect due to a releasing force generated by the Newtonian viscous stress. In contrast, the pusher is found to be perpetually trapped near the wall as a result of the formation of a highly stretched region behind its body. It is shown that the shear-thinning property of the fluid weakens the wall-trapping effect for the pusher squirmer.
Collapse
Affiliation(s)
- G. -J. Li
- Department of Aerospace and Mechanical Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
| | - A. Karimi
- Department of Aerospace and Mechanical Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
| | - A. M. Ardekani
- Department of Aerospace and Mechanical Engineering, University of Notre Dame, Notre Dame, IN 46556, USA
- School of Mechanical Engineering, Purdue University, West Lafayette, IN, 47907, USA
| |
Collapse
|