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Licón-Muñoz Y, Avalos V, Subramanian S, Granger B, Martinez F, Varela S, Moore D, Perkins E, Kogan M, Berto S, Chohan M, Bowers C, Piccirillo S. Single-nucleus and spatial landscape of the sub-ventricular zone in human glioblastoma. bioRxiv 2024:2024.04.24.590852. [PMID: 38712234 PMCID: PMC11071523 DOI: 10.1101/2024.04.24.590852] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
The sub-ventricular zone (SVZ) is the most well-characterized neurogenic area in the mammalian brain. We previously showed that in 65% of patients with glioblastoma (GBM), the SVZ is a reservoir of cancer stem-like cells that contribute to treatment resistance and emergence of recurrence. Here, we built a single-nucleus RNA-sequencing-based microenvironment landscape of the tumor mass (T_Mass) and the SVZ (T_SVZ) of 15 GBM patients and 2 histologically normal SVZ (N_SVZ) samples as controls. We identified a mesenchymal signature in the T_SVZ of GBM patients: tumor cells from the T_SVZ relied on the ZEB1 regulatory network, whereas tumor cells in the T_Mass relied on the TEAD1 regulatory network. Moreover, the T_SVZ microenvironment was predominantly characterized by tumor-supportive microglia, which spatially co-exist and establish heterotypic interactions with tumor cells. Lastly, differential gene expression analyses, predictions of ligand-receptor and incoming/outgoing interactions, and functional assays revealed that the IL-1β/IL-1RAcP and Wnt-5a/Frizzled-3 pathways are therapeutic targets in the T_SVZ microenvironment. Our data provide insights into the biology of the SVZ in GBM patients and identify specific targets of this microenvironment.
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Affiliation(s)
- Y. Licón-Muñoz
- The Brain Tumor Translational Laboratory, Department of Cell Biology and Physiology, University of New Mexico Health Sciences Center, Albuquerque, NM
- University of New Mexico Comprehensive Cancer Center, Albuquerque, NM
| | - V. Avalos
- The Brain Tumor Translational Laboratory, Department of Cell Biology and Physiology, University of New Mexico Health Sciences Center, Albuquerque, NM
- University of New Mexico Comprehensive Cancer Center, Albuquerque, NM
| | - S. Subramanian
- Bioinformatics Core, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
- Neurogenomics Laboratory, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
| | - B. Granger
- Bioinformatics Core, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
- Neurogenomics Laboratory, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
| | - F. Martinez
- The Brain Tumor Translational Laboratory, Department of Cell Biology and Physiology, University of New Mexico Health Sciences Center, Albuquerque, NM
- University of New Mexico Comprehensive Cancer Center, Albuquerque, NM
| | - S. Varela
- University of New Mexico School of Medicine, Albuquerque, NM
| | - D. Moore
- Bioinformatics Core, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
- Neurogenomics Laboratory, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
| | - E. Perkins
- Department of Neurosurgery, University of Mississippi Medical Center, Jackson, MS
| | - M. Kogan
- Department of Neurosurgery, University of New Mexico Hospital, Albuquerque, NM
| | - S. Berto
- Bioinformatics Core, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
- Neurogenomics Laboratory, Department of Neuroscience, Medical University of South Carolina, Charleston, SC
| | - M.O. Chohan
- Department of Neurosurgery, University of Mississippi Medical Center, Jackson, MS
| | - C.A. Bowers
- Department of Neurosurgery, University of New Mexico Hospital, Albuquerque, NM
| | - S.G.M. Piccirillo
- The Brain Tumor Translational Laboratory, Department of Cell Biology and Physiology, University of New Mexico Health Sciences Center, Albuquerque, NM
- University of New Mexico Comprehensive Cancer Center, Albuquerque, NM
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Jawaharlal S, Subramanian S, Palanivel V, Devarajan G, Veerasamy V. Cyclodextrin-based nanosponges as promising carriers for active pharmaceutical ingredient. J Biochem Mol Toxicol 2024; 38:e23597. [PMID: 38037252 DOI: 10.1002/jbt.23597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 10/18/2023] [Accepted: 11/20/2023] [Indexed: 12/02/2023]
Abstract
Effective drug distribution at the intended or particular location is a critical issue that researchers are now dealing. Nanosponges have significantly increased in importance in medication delivery using nanotechnology in recent years. An important step toward solving these problems has been the development of nanosponges. Recently created and proposed for use in drug delivery, nanosponge is a unique type of hyper-crosslinked polymer-based colloidal structures made up of solid nanoparticles with colloidal carriers. Nanosponges are solid porous particles that may hold pharmaceuticals and other actives in their nanocavities. They can be made into dosage forms for oral, parenteral, topical, or inhalation use. The targeted distribution of drugs in a regulated manner is greatly aided by nanosponge. The utilization of nanosponges, their benefits, their production processes, the polymers they are made of, and their characterization have all been covered in this review article.
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Affiliation(s)
- Saranya Jawaharlal
- Department of Biochemistry & Biotechnology, Annamalai University, Annamalai Nagar, Tamil Nadu, India
| | | | - Venkatesan Palanivel
- Department of Pharmacy, Annamalai University, Annamalai Nagar, Tamil Nadu, India
| | - Geetha Devarajan
- Department of Physics, Annamalai University, Annamalai Nagar, Tamil Nadu, India
| | - Vinothkumar Veerasamy
- Department of Biochemistry & Biotechnology, Annamalai University, Annamalai Nagar, Tamil Nadu, India
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Velmurugan S, Ashajyothi M, Charishma K, Kumar S, Balamurugan A, Javed M, Karwa S, Prakash G, Subramanian S, Gogoi R, Eke P, Kumar A. Enhancing defense against rice blast disease: Unveiling the role of leaf endophytic firmicutes in antifungal antibiosis and induced systemic resistance. Microb Pathog 2023; 184:106326. [PMID: 37648175 DOI: 10.1016/j.micpath.2023.106326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2023] [Revised: 08/24/2023] [Accepted: 08/25/2023] [Indexed: 09/01/2023]
Abstract
Rice remains the primary staple for more than half of the world's population, yet its cultivation faces numerous challenges, including both biotic and abiotic stresses. One significant obstacle is the prevalence of rice blast disease, which substantially diminishes productivity and increases cultivation costs due to frequent fungicide applications. Consequently, the presence of fungicide residues in rice raises concerns about compliance with international maximum residue limits (MRLs). While host resistance has proven effective, it often remains vulnerable to new variants of the Magnaporthe oryzae pathogen. Therefore, there is a critical need to explore innovative management strategies that can complement or enhance existing methods. An unexplored avenue involves harnessing endophytic bacterial communities. To this end, the present study investigates the potential of eleven endophytic Bacillus spp. in suppressing Pyricularia oryzae, promoting plant growth, and eliciting a defense response through phyllobacterization. The results indicate that the secreted metabolome and volatilome of seven tested isolates demonstrate inhibitory effects against P.oryzae, ranging from a minimum of 40% to a maximum of 70%. Bacillus siamensis L34, B. amyloliquefaciens RA37, B. velezensis L12, and B. subtilis B18 produce antifungal antibiotics targeting P.oryzae. Additionally, B. subtilis S4 and B. subtilis S6 emerge as excellent inducers of systemic resistance against blast disease, as evidenced by elevated activity of biochemical defense enzymes such as peroxidase, polyphenol oxidase, and total phenol content. However, a balance between primary metabolic activity (e.g., chlorophyll content, chlorophyll fluorescence, and photosynthetic rate) and defense activity is observed. Furthermore, specific endophytic Bacillus spp. significantly stimulates defense-related genes, including OsPAD4, OsFMO1, and OsEDS1. These findings underscore the multifaceted potential of endophytic Bacillus in managing blast disease through antibiosis and induced systemic resistance. In conclusion, this study highlights the promising role of endophytic Bacillus spp. as a viable option for blast disease management. Their ability to inhibit the pathogen and induce systemic resistance makes them a valuable addition to the existing strategies. However, it is crucial to consider the trade-off between primary metabolic activity and defense response when implementing these bacteria-based approaches.
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Affiliation(s)
| | | | | | - Shanu Kumar
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | | | - Mohammed Javed
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Sourabh Karwa
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Ganesan Prakash
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | - S Subramanian
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Robin Gogoi
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Pierre Eke
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Aundy Kumar
- ICAR - Indian Agricultural Research Institute, New Delhi, 110012, India.
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Dörpholz H, Subramanian S, Zouni A, Lisdat F. Photoelectrochemistry of a photosystem I - Ferredoxin construct on ITO electrodes. Bioelectrochemistry 2023; 153:108459. [PMID: 37263168 DOI: 10.1016/j.bioelechem.2023.108459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 04/26/2023] [Accepted: 05/03/2023] [Indexed: 06/03/2023]
Abstract
In this study, photobioelectrodes based on a ferredoxin-modified photosystem I (PSI-Fd) from Thermosynechococcus vestitus have been prepared and characterized regarding the direct electron transfer between PSI-Fd and the electrode. The modified PSI with the covalently linked ferredoxin (Fd) on its stromal side has been immobilized on indium-tin-oxide (ITO) electrodes with a 3-dimensional inverse-opal structure. Compared to native PSI, a lower photocurrent and a lower onset potential of the cathodic photocurrent have been observed. This can be mainly attributed to a different adsorption behavior of the PSI-Fd-construct onto the 3D ITO. However, the overall behavior is rather similar to PSI. First experiments have been performed for applying this PSI-Fd photobioelectrode for enzyme-driven NADPH generation. By coupling the electrode system with ferredoxin-NADP+-reductase (FNR), first hints for the usage of photoelectrons for biosynthesis have been collected by verifying NADPH generation.
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Affiliation(s)
- H Dörpholz
- Biosystems Technology, Institute of Life Sciences and Biomedical Technologies, Technical University of Applied Sciences Wildau, 15745 Wildau, Germany.
| | - S Subramanian
- Biophysics of Photosynthesis, Institute of Biology, Humboldt University Berlin, 10115 Berlin, Germany
| | - A Zouni
- Biophysics of Photosynthesis, Institute of Biology, Humboldt University Berlin, 10115 Berlin, Germany
| | - F Lisdat
- Biosystems Technology, Institute of Life Sciences and Biomedical Technologies, Technical University of Applied Sciences Wildau, 15745 Wildau, Germany.
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Singh S, Naik TSSK, Uppara B, Narasimhappa P, Varshney R, Chauhan V, Shehata N, Thamaraiselvan C, Subramanian S, Singh J, Khan NA, Zahmatkesh S, Singh L, Ramamurthy PC. Novel and sustainable green sulfur-doped carbon nanospheres via hydrothermal process for Cd (II) ion removal. Chemosphere 2023; 328:138533. [PMID: 37004819 DOI: 10.1016/j.chemosphere.2023.138533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 03/13/2023] [Accepted: 03/26/2023] [Indexed: 06/19/2023]
Abstract
Herein, the synthesis, characterization, and adsorption performance of a novel green sulfur-doped carbon nanosphere (S-CNs) is studied to eliminate Cd (II) ions from water effectively. S-CNs were characterized using different techniques including Raman spectroscopy, powder X-ray diffraction (PXRD), scanning electron microscopy (SEM) with energy dispersive X-ray analysis (EDX), , Brunauer-Emmett-Teller (BET) specific surface area analysis and Fourier transform infrared spectrophotometry (FT-IR), were performed. The efficient adsorption of the Cd (II) ions onto S-CNs strongly depended on pH, initial concentration of Cd (II) ions, S-CNs dosage, and temperature. Four isotherm models (Langmuir, Freundlich, Temkin & Redlich Peterson) were tested for modeling. Out of four, Langmuir showed more applicability than the other three models, with a Qmax value of 242.72 mg/g. Kinetic modeling studies suggest a superior fit of the obtained experimental data with the Elovich equation (linear) and pseudo-second-order (non-linear) rather than other linear and non-linear models. Data obtained from thermodynamic modeling indicates that using S-CNs for Cd (II) ions adsorption is a spontaneous and endothermic . The current work recommends using better and recyclable S-CNs to uptake excess Cd (II) ions.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - T S S K Naik
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Basavaraju Uppara
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Pavithra Narasimhappa
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - R Varshney
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - V Chauhan
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - N Shehata
- Department of Environmental Science and Industrial Development, Faculty of Postgraduate Studies for Advanced Sciences, Beni-Suef University, Egypt
| | - C Thamaraiselvan
- Inter Disciplinary Centre for Energy Research (ICER), Indian Institute of Science, Bangalore, 560012, Karnataka, India
| | - S Subramanian
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Jalandhar, Punjab, 144111, India
| | - Nadeem A Khan
- Interdisciplinary Research Center for Membranes and Water Security, King Fahd University of Petroleum and Minerals, Dhahran, 31261, Saudi Arabia
| | - Sasan Zahmatkesh
- Tecnologico de Monterrey, Escuela de Ingenieríay Ciencias, Puebla, Mexico
| | - Lakhveer Singh
- Department of Chemistry, Sardar Patel University, Mandi, 175001, Himachal Pradesh, India
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India.
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Mikulski M, Iyer S, Well A, Subramanian S, Mery C, Owens W, Glass L, Castleberry C, Fraser C. Successful Explantation of Children from the Berlin Heart Excor Ventricular Assist Device: A Systematic Review. J Heart Lung Transplant 2023. [DOI: 10.1016/j.healun.2023.02.621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023] Open
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7
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Singh S, N P, Naik TSSK, Basavaraju U, Thamaraiselvan C, Behera SK, Kour R, Dwivedi P, Subramanian S, Khan NA, Singh J, Ramamurthy PC. Removal of Pb ions using green Co 3O 4 nanoparticles: Simulation, modeling, adsorption, and biological studies. Environ Res 2023; 222:115335. [PMID: 36693464 DOI: 10.1016/j.envres.2023.115335] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 12/27/2022] [Accepted: 01/18/2023] [Indexed: 06/17/2023]
Abstract
Chemical co-precipitation synthesized novel and green cobalt-oxide nanoparticles (Co3O4-NPs) utilizing cobalt nitrate as cobalt precursors. FTIR, Raman, scanning electron microscopy, UV visible, X-ray powder diffraction, and BET was used to analyze the surface characteristics, composition, and morphology, of the NPs. These green Co3O4-NPs were employed to remove Pb ions from simulated wastewater solutions at various pH, adsorbate, temperature, and dose concentrations. At dose 20 mg/L, pH 6.0, 20 mg/L (Pb(II) solution, 25 °C of temperature, and 45 min for equilibrium, nearly 99.44% of Pb ions were removed. To evaluate the kinetic data, four different kinetic equations were used. The data fit the Elovich rate equation better than the other three models. Thermodynamic and isothermal studies were also evaluated, and the maximum adsorption capacity of 450.45 mg/g was observed at 298.15 K. 0.1 M HNO3, and 0.1 HCl were used to regenerate used Co3O4-NPs. Simulation results show the strong correlation of the Co atom in the Co3O4-NPs generates active delocalized surface states, which are energetically most favorable for heavy metal (Pb ions) adsorption and removal, supporting the experimental outcomes. In concluding remarks, green Co3O4-NPs can also be used as an adsorbent to remove Pb ions from wastewater bodies.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - Pavithra N
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - T S S K Naik
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - U Basavaraju
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - C Thamaraiselvan
- Inter Disciplinary Centre for Energy Research (ICER), Indian Institute of Science, Bangalore, 560012, Karnataka, India
| | - S K Behera
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Retinder Kour
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - Padmanabh Dwivedi
- Department of Plant Physiology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, 221 005, India
| | - S Subramanian
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Nadeem A Khan
- Department of Civil Engineering, Mewat Engineering College, Nuh, Haryana, 122107, India
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Jalandhar, Punjab, 144111, India
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India.
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Sreenivasulu A, Subramanian S, Raju PS. Design and simulation of Advanced intelligent deep learning MPPT approach to enhance power extraction of 1000 W grid connected Photovoltaic System. IFS 2022. [DOI: 10.3233/jifs-221465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The world’s energy offer has been beneath an incredible pressure because of the speedy depletion of fossil resources, energy security, environmental issues and therefore the ever-increasing fashionable living sophistication. The problem of persistent hikes in oil costs, climate threats and soaring energy demand has pleased the worldwide interest to exploiting and investment in renewable sorts of energy (RE), alternative energy specially. A electrical phenomenon, PV system is simple to put in, has no moving components, is sort of freed from maintenance, reduced vulnerability to power loss and is expandable. Despite these benefits, PV energy prices significantly on top of fossil fuels. This can be because of its lower effectiveness and better prices. In PV systems tracking MPPT in effective manner is still the problem. In this paper, the 1000 W grid connected PV system has been taken for analysis of various MPPT techniques. Grid connected PV system modeled, tested under totally different irradiation conditions and conjointly for partial shading conditions. additional it’s enforced under partial shading condition for early MPPT ways, improvement methodology,at finally adopted deep learning methodology for the system and therefore the obtained results were compared with different methods.
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Affiliation(s)
- A. Sreenivasulu
- Department of EEE, Annamalai University, Chidambaram, Tamil Nadu, India
| | - S. Subramanian
- Department of EEE, Annamalai University, Chidambaram, Tamil Nadu, India
| | - P. Sangameswara Raju
- Department of EEE, S.V. University College of Engineering, Tirupati, Andhra Pradesh, India
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Singh S, Kumar Naik TSS, Chauhan V, Shehata N, Kaur H, Dhanjal DS, Marcelino LA, Bhati S, Subramanian S, Singh J, Ramamurthy PC. Ecological effects, remediation, distribution, and sensing techniques of chromium. Chemosphere 2022; 307:135804. [PMID: 35932914 DOI: 10.1016/j.chemosphere.2022.135804] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2022] [Revised: 07/16/2022] [Accepted: 07/19/2022] [Indexed: 06/15/2023]
Abstract
Chromium is detected in most ecosystems due to the increased anthropogenic activities in addition to that developed from natural pollution. Chromium contamination in the food chain results due to its persistent and non-degradable nature. The release of chromium in the ecosystem accretes and thereafter impacts different life forms, including humans, aquatic and terrestrial organisms. Leaching of chromium into the ground and surface water triggers several health ailments, such as dermatitis, eczematous skin, allergic reactions, mucous and skin membrane ulcerations, allergic asthmatic reactions, bronchial carcinoma and gastroenteritis. Physiological and biological treatments for the removal of chromium have been discussed in depth in the present communication. Adsorption and biological treatment methods are proven to be alternatives to chemical removal techniques in terms of cost-effectiveness and low sludge formation. Chromium sensing is an alternative approach for regular monitoring of chromium in different water bodies. This review intended to explore different classes of sensors for chromium monitoring. However, the spectrochemical methods are more sensitive in chromium ions sensing than electrochemical methods. Future study should focus on miniaturization for portability and on-site measurements without requiring a large instrument provides a good aspect for future research.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - T S Sunil Kumar Naik
- Department of Material Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Vishakha Chauhan
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India
| | - Nabila Shehata
- Environmental Science and Industrial Development Department, Faculty of Postgraduate Studies for Advanced Sciences, Beni-Suef University, Beni-Suef, Egypt
| | - Harry Kaur
- Department of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, India
| | - Daljeet Singh Dhanjal
- Department of Microbiology, Lovely Professional University, Phagwara, 144411, Punjab, India
| | - Liliana Aguilar Marcelino
- Centro Nacional de Investigación Disciplinariaen Salud Animal e Inocuidad, INIFAP, Jiutepec, Morelos, C.P, 62550, Mexico
| | - Shipra Bhati
- Department of Chemistry, The Oxford College of Engineering, Bangalore, Karnataka, 560068, India
| | - S Subramanian
- Department of Material Engineering, Indian Institute of Science, Bangalore, 560012, India
| | - Joginder Singh
- Department of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, India.
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 560012, India.
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Chaithra M, Prameeladevi T, Bhagyasree SN, Prasad L, Subramanian S, Kamil D. “Multilocus sequence analysis for population diversity of indigenous entomopathogenic fungus Beauveria bassiana and its bio-efficacy against the cassava mite, Tetranychus truncatus Ehara (Acari: Tetranychidae)”. Front Microbiol 2022; 13:1007017. [PMID: 36304955 PMCID: PMC9593087 DOI: 10.3389/fmicb.2022.1007017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Accepted: 09/13/2022] [Indexed: 11/14/2022] Open
Abstract
Beauveria bassiana is an entomopathogenic fungus that causes the white muscadine disease in insects. The majority of entomopathogenic fungi are soil and insect borne, 15 soil samples were collected from seven different locations during 2021, from January to December. Similarly, during 2022, March to December, 15 fungus-infected insect specimens were collected from five different locations hence soil and insect samples from various ecosystems were collected. As a result, 30 B. bassiana isolates from 11 different geographical areas were identified using morphological characteristics and multilocus sequence data in this investigation. The taxonomical positions of the isolates were determined using morphological characteristics and phylogenetic inferences based on three loci (Internal Transcribed Sequence, Elongation Factor-1α, and B. bassiana chitinase 1). In phylogenetic analysis of B. bassiana, the Maximum Likelihood analytical method produced distinct tree topology when compared to Neighbor-joining and minimum evolution. Three isolates viz., Bb3, Bb7 and Bb20 were found closely linked with reference isolate (KTU-24) and other showed the higher population diversity among them. The genetic distances of 30 B. bassiana isolates revealed that 15 were not closely related (D varied from 0.003 to 0.036). The pathogenicity of B. bassiana isolates from various hosts along with one commercial formulation (Beveroz) was assessed against Tetranychus truncatus under in vitro conditions by a completely randomized design (CRD) experiment. The same experiment was repeated thrice to confirm the pathogenicity of B. bassiana against T. truncatus. Later, the collected T. truncatus mortality data was converted into corrected mortality by using the Abbott formula and the values were examined using analysis of variance (ANOVA) in SPSS 23.0 software. Duncan’s Multiple Comparison Test was also done to compare the percentage mortality rates among the 30 B. bassiana isolates. The recorded results showed that the Bb6, Bb15 and Bb12 isolates caused significantly higher mortality of T. truncatus, i.e., 97.73, 96.73 and 94.50% respectively, than the other isolates. This study showed the relativeness among the B. bassiana isolates and establishes their bio-efficacy against T. truncatus, which further can be used for commercialization as bio-pesticide.
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Affiliation(s)
- M. Chaithra
- Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - T. Prameeladevi
- Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - S. N. Bhagyasree
- Division of Entomology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - L. Prasad
- Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - S. Subramanian
- Division of Entomology, ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Deeba Kamil
- Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India
- *Correspondence: Deeba Kamil,
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Haddadi N, Mande P, Brodeur T, Hao K, Ryan G, Moses S, Subramanian S, Picari X, Afshari K, Marshak-Rothstein A, Richmond J. LB868 Th2 skewing promotes the expression of skin-homing molecules on T cells and is required for the induction of skin lesions in lupus-prone mice. J Invest Dermatol 2022. [DOI: 10.1016/j.jid.2022.05.883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Singh S, Naik TSSK, Anil AG, Khasnabis S, Nath B, U B, Kumar V, Garg VK, Subramanian S, Singh J, Ramamurthy PC. A novel CaO nanocomposite cross linked graphene oxide for Cr(VI) removal and sensing from wastewater. Chemosphere 2022; 301:134714. [PMID: 35489459 DOI: 10.1016/j.chemosphere.2022.134714] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 03/01/2022] [Accepted: 04/21/2022] [Indexed: 05/19/2023]
Abstract
A novel green nanocomposite has been prepared by immobilizing CaO nanoparticles (CaO NPs) on the surface of graphene oxide. Biogenic CaO-NPs were synthesized from Lala clamshells. Morphological and structural characterizations of the nanocomposite were studied extensively. The adsorption capacity (qmax) of the nanocomposite for removing Cr(VI) was 38.04 mg g-1. In addition to this, the adsorption data were adequately simulated with Langmuir, Freundlich, Temkin, and pseudo-second-order models, suggesting that the adsorption process was the combination of external mass transfer and chemisorption. Electrostatic interaction was the dominant mechanism for Cr(VI) removal. In addition, the synthesized nanocomposites also serve as an excellent sensor for Cr(VI) sensing, with a limit of detection (LOD) of 0.02 μM utilizing electrochemical methods. Therefore, this green nanocomposite can simultaneously serve as an adsorbent and sensor for Cr(VI)removal from aqueous solutions.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 56001, India
| | - T S Sunil Kumar Naik
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Amith G Anil
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Sutripto Khasnabis
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Bidisha Nath
- Interdisciplinary Centre for Energy Research, Indian Institute of Science, Bangalore, 56001, India
| | - Basavaraju U
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Vineet Kumar
- Department of Botany, Guru Ghasidas Vishwavidyalaya, Bilaspur, Chhattisgarh, 495009, India
| | - V K Garg
- Centre for Environmental Science and Technology, School of Environment and Earth Sciences, Central University of Punjab, Bathinda, 151001, Punjab, India
| | - S Subramanian
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Jalandhar, Punjab, 144111, India.
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 56001, India.
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Creedy J, Subramanian S. Mortality Comparisons ‘At a Glance’: A Mortality Concentration Curve and Decomposition Analysis for India. Sankhya B 2022; 84:873-894. [PMID: 35915706 PMCID: PMC9330966 DOI: 10.1007/s13571-022-00293-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/22/2022] [Accepted: 07/03/2022] [Indexed: 12/05/2022]
Abstract
This paper uses the concept of the Mortality Concentration Curve (M-Curve), which plots the cumulative proportion of deaths against the corresponding cumulative proportion of the population (arranged in ascending order of age), and associated measures, to examine mortality experience in India. A feature of the M-curve is that it can be combined with an explicit value judgement (an aversion to early deaths) in order to make welfare-loss comparisons. Empirical comparisons over time, and between regions and genders, are made. Furthermore, in order to provide additional perspective, selective results for the UK and New Zealand are reported. It is also shown how the M-curve concept can be used to separate the contributions to overall mortality of changes over time (or differences between population groups) to the population age distribution and age-specific mortality rates.
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Affiliation(s)
- John Creedy
- Victoria University of Wellington, Wellington, New Zealand
| | - S. Subramanian
- Independent Scholar; formerly, Madras Institute of Development Studies, Chennai, India
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14
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Niassy S, Omuse ER, Roos N, Halloran A, Eilenberg J, Egonyu JP, Tanga C, Meutchieye F, Mwangi R, Subramanian S, Musundire R, Nkunika POY, Anankware JP, Kinyuru J, Yusuf A, Ekesi S. Safety, regulatory and environmental issues related to breeding and international trade of edible insects in Africa. REV SCI TECH OIE 2022; 41:117-131. [PMID: 35925629 DOI: 10.20506/rst.41.1.3309] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Insect breeding or farming for food and feed is an emerging enterprise that can address the ever-growing demand for protein and curb high unemployment rates in Africa and beyond. However, for the sector to prosper, its value chain needs to be regulated to ensure sustainability and safety for consumers and the environment. Although a few African countries, such as Kenya, Uganda and Rwanda, have promulgated standards on the use of insects as food and feed, greater efforts are needed in other countries, and relevant policies governing the sector need to be formulated. All over the globe, attention to the regulation of the edible insect sector is increasing, and more investment in the industry is foreseen. Safety issues such as identifying which species should be reared, substrate quality and traceability imposed by importing countries will be critical for expansion of the sector. This paper analyses safety, regulatory and environmental issues related to breeding and international trade of edible insects in Africa and provides case studies and recommendations for sustainable use of insects for food and feed.
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15
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Golub M, Gätcke J, Subramanian S, Kölsch A, Darwish T, Howard JK, Feoktystov A, Matsarskaia O, Martel A, Porcar L, Zouni A, Pieper J. "Invisible" Detergents Enable a Reliable Determination of Solution Structures of Native Photosystems by Small-Angle Neutron Scattering. J Phys Chem B 2022; 126:2824-2833. [PMID: 35384657 DOI: 10.1021/acs.jpcb.2c01591] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Photosystems I (PSI) and II (PSII) are pigment-protein complexes capable of performing the light-induced charge separation necessary to convert solar energy into a biochemically storable form, an essential step in photosynthesis. Small-angle neutron scattering (SANS) is unique in providing structural information on PSI and PSII in solution under nearly physiological conditions without the need for crystallization or temperature decrease. We show that the reliability of the solution structure critically depends on proper contrast matching of the detergent belt surrounding the protein. Especially, specifically deuterated ("invisible") detergents are shown to be properly matched out in SANS experiments by a direct, quantitative comparison with conventional matching strategies. In contrast, protonated detergents necessarily exhibit incomplete matching so that related SANS results systematically overestimate the size of the membrane protein under study. While the solution structures obtained are close to corresponding high-resolution structures, we show that temperature and solution state lead to individual structural differences compared with high-resolution structures. We attribute these differences to the presence of a manifold of conformational substates accessible by protein dynamics under physiological conditions.
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Affiliation(s)
- M Golub
- Institute of Physics, University of Tartu, Wilhelm Ostwald str. 1, 50411 Tartu, Estonia
| | - J Gätcke
- Humboldt-Universität zu Berlin, Philippstr. 13, 10115 Berlin, Germany
| | - S Subramanian
- Humboldt-Universität zu Berlin, Philippstr. 13, 10115 Berlin, Germany
| | - A Kölsch
- Humboldt-Universität zu Berlin, Philippstr. 13, 10115 Berlin, Germany
| | - T Darwish
- National Deuteration Facility, Australian Nuclear Science and Technology Organization, New Illawarra Road, Lucas Heights, NSW 2234, Australia
| | - J K Howard
- National Deuteration Facility, Australian Nuclear Science and Technology Organization, New Illawarra Road, Lucas Heights, NSW 2234, Australia
| | - A Feoktystov
- Forschungszentrum Jülich GmbH, Jülich Centre for Neutron Science (JCNS) at Heinz Maier-Leibnitz Zentrum (MLZ), Lichtenbergstr. 1, 85748 Garching, Germany
| | - O Matsarskaia
- Institut Laue-Langevin, 71 Avenue des Martyrs CS 20156, 38042 Grenoble Cedex 9, France
| | - A Martel
- Institut Laue-Langevin, 71 Avenue des Martyrs CS 20156, 38042 Grenoble Cedex 9, France
| | - L Porcar
- Institut Laue-Langevin, 71 Avenue des Martyrs CS 20156, 38042 Grenoble Cedex 9, France
| | - A Zouni
- Humboldt-Universität zu Berlin, Philippstr. 13, 10115 Berlin, Germany
| | - J Pieper
- Institute of Physics, University of Tartu, Wilhelm Ostwald str. 1, 50411 Tartu, Estonia
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Gupta A, Kataria SK, Kumar K, Subramanian S. PRIMARY NON HODGKIN'S LYMPHOMA OF STERNUM. Indian J Med Paediatr Oncol 2022. [DOI: 10.1055/s-0041-1733160] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
Affiliation(s)
- Aarti Gupta
- Department of Medical Oncology, All India Institute of Medical Sciences, New Delhi, India
| | - S K Kataria
- Department of Medical Oncology, All India Institute of Medical Sciences, New Delhi, India
| | - Kamlesh Kumar
- Department of Pathology, All India Institute of Medical Sciences, New Delhi, India
| | - S Subramanian
- Department of Radiodiagnosis, All India Institute of Medical Sciences, New Delhi, India
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Singh S, Anil AG, Kumar V, Kapoor D, Subramanian S, Singh J, Ramamurthy PC. Nitrates in the environment: A critical review of their distribution, sensing techniques, ecological effects and remediation. Chemosphere 2022; 287:131996. [PMID: 34455120 DOI: 10.1016/j.chemosphere.2021.131996] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 08/13/2021] [Accepted: 08/22/2021] [Indexed: 06/13/2023]
Abstract
Nitrate pollution is eminent in almost all the developing nations as a result of increased natural activities apart from anthropogenic pollution. The release of nitrates in more than critical quantities into the water bodies causes accretion impacts on living creatures, environmental receptors, and human vigour by accumulation through the food chain. Nitrates have recently acquired researchers' huge attention and extend their roots in environmental contamination of surface and groundwater systems. The presence of nitrate in high concentrations in surface and groundwater triggers several health problems, for instance, methemoglobinemia, diabetes, eruption of infectious disorders, harmfully influence aquatic organisms. Sensing nitrate is an alternate option for monitoring the distribution of nitrate in different water bodies. Here we review electrochemical, spectroscopic, and electrical modes of nitrate sensing. It is concluded that, among the various sensors discussed in this review, FET sensors are the most desirable choice. Their sensitivity, ease of use and scope for miniaturisation are exceptional. Advanced functional materials need to be designed to satiate the growing need for environmental monitoring. Different sources of nitrate contamination in ground and surface water can be estimated using different techniques such as nitrate isotopic composition, co contaminants, water tracers, and other specialized techniques. This review intends to explore the research work on remediation of nitrate from wastewater and soil using different processes such as reverse osmosis, chemical denitrification, biological denitrification, ion exchange, electrodialysis, and adsorption. Denitrification proves as a promising alternative over previously reported techniques in terms of their nitrate removal because of its high cost-effectiveness.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 56001, India
| | - Amith G Anil
- Department of Material Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Vijay Kumar
- Department of Chemistry, Central Ayurveda Research Institute, Jhansi, U.P. , India
| | - Dhriti Kapoor
- Department of Botany, Lovely Professional University, Jalandhar, Punjab, 144111, India
| | - S Subramanian
- Department of Material Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Jalandhar, Punjab, 144111, India.
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 56001, India.
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18
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Holen E, Chen M, Fjelldal PG, Skjærven K, Sissener NH, Remø S, Prabhu AJ, Hamre K, Vikeså V, Subramanian S, Espe M. Tailoring freshwater diets towards boosted immunity and pancreas disease infection robustness in Atlantic salmon post smolts. Fish Shellfish Immunol 2022; 120:377-391. [PMID: 34808357 DOI: 10.1016/j.fsi.2021.11.019] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2021] [Revised: 11/11/2021] [Accepted: 11/12/2021] [Indexed: 06/13/2023]
Abstract
The aim of the current study was to investigate how freshwater diets impact on immunity in Atlantic salmon smolts in freshwater, during transfer to seawater and in post smolts during the seawater stage with and without pancreas disease (PD) infection. Three specific freshwater diets were prepared: (i) A diet similar in composition to commercial salmon freshwater diets (Standard diet); (ii) A diet composed of vegetable oils (rapeseed, palm and linseed oils) mimicking the fat composition in aquatic insects - the natural diet of wild salmon in freshwater (Fatty acid diet); (iii) A diet enriched with possible immune modulating amino acids including dl-methionine, l-lysine, l-threonine and taurine (Amino acid diet). After seawater transfer, all fish were fed the same commercial diet. Head kidneys were extracted, and their leukocytes isolated from smolts right before transfer to seawater, from post smolts one and six weeks after transfer to seawater, and from post smolts in seawater after 8 weeks of ongoing PD infection. In addition, to provoke bacterial or virus induced inflammation in vitro, the individual leukocyte suspension from all fish were stimulated by lipopolysaccharide (LPS) or polyinosinic acid: polycytidylic acid (PIC). The transfer of smolts from fresh-to seawater changed the transcription of several types of genes. Particularly in isolates from fish fed the Standard or Fatty acid diet in freshwater, overall gene transcription (IL-1β, CD83, INF-γ, cox2, cd36, MGAT2, catalase) declined. However, the Amino acid diet stimulated the LPS induced gene transcription of IL-1β, CD83, Cox2, and INF-γ at this stage. In freshwater smolts, PIC stimulated leukocytes showed higher transcription level of Mx and viperin in the Fatty acid and Amino acid diet groups compared to the Standard diet group. In seawater post smolts, Mx and viperin responded similarly to PIC challenge in all diet groups. Furthermore, leukocytes isolated from PD infected fish, continued responding to PIC, regardless of freshwater diet.
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Affiliation(s)
- E Holen
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway.
| | - M Chen
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway; Institute of Aquatic Economic Animals, Sun Yat-Sen University, Guangzhou, China
| | - P G Fjelldal
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
| | - K Skjærven
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
| | - N H Sissener
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
| | - S Remø
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
| | - A J Prabhu
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
| | - K Hamre
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
| | - V Vikeså
- Skretting ARC, Sjøhagen 3, 4026, Stavanger, Norway
| | | | - M Espe
- Institute of Marine Research, Postboks 1870, Nordnes, 5817, Bergen, Norway
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Subramanian S, Biswas A, Alves C, Sudhakar S, Shekdar K, Krishnan P, Shroff M, Taranath A, Arrigoni F, Aldinger K, Leventer R, Dobyns W, Mankad K. ACTA2-Related Dysgyria: An Under-Recognized Malformation of Cortical Development. AJNR Am J Neuroradiol 2022; 43:146-150. [PMID: 34857515 PMCID: PMC8757559 DOI: 10.3174/ajnr.a7364] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Accepted: 09/27/2021] [Indexed: 01/03/2023]
Abstract
BACKGROUND AND PURPOSE Pathogenic variants in the ACTA2 gene cause a distinctive arterial phenotype that has recently been described to be associated with brain malformation. Our objective was to further characterize gyral abnormalities in patients with ACTA2 pathogenic variants as per the 2020 consensus recommendations for the definition and classification of malformations of cortical development. MATERIALS AND METHODS We performed a retrospective, multicentric review of patients with proved ACTA2 pathogenic variants, searching for the presence of malformations of cortical development. A consensus read was performed for all patients, and the type and location of cortical malformation were noted in each. The presence of the typical ACTA2 arterial phenotype as well as demographic and relevant clinical data was obtained. RESULTS We included 13 patients with ACTA2 pathogenic variants (Arg179His mutation, n = 11, and Arg179Cys mutation, n = 2). Ninety-two percent (12/13) of patients had peri-Sylvian dysgyria, 77% (10/13) had frontal dysgyria, and 15% (2/13) had generalized dysgyria. The peri-Sylvian location was involved in all patients with dysgyria (12/12). All patients with dysgyria had a characteristic arterial phenotype described in ACTA2 pathogenic variants. One patient did not have dysgyria or the characteristic arterial phenotype. CONCLUSIONS Dysgyria is common in patients with ACTA2 pathogenic variants, with a peri-Sylvian and frontal predominance, and was seen in all our patients who also had the typical ACTA2 arterial phenotype.
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Affiliation(s)
- S. Subramanian
- From the Division of Pediatric Radiology (S.S.), Department of Radiology, UPMC Children’s Hospital of Pittsburgh, Pittsburgh, Pennsylvania
| | - A. Biswas
- Department of Diagnostic Imaging (A.B., P.K., M.S.), The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada
| | | | - S.V. Sudhakar
- Department of Radiology (S.V.S., K.M.), Great Ormond Street Hospital, NHS Foundation Trust, London, UK
| | - K.V. Shekdar
- Department of Radiology, and Department of Radiology (K.V.S.), Perelman School of Medicine at the University of Pennsylvania, The Children’s Hospital of Philadelphia, Philadelphia, Pennsylvania
| | - P. Krishnan
- Department of Diagnostic Imaging (A.B., P.K., M.S.), The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada
| | - M. Shroff
- Department of Diagnostic Imaging (A.B., P.K., M.S.), The Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada
| | - A. Taranath
- Department of Medical Imaging (A.T.), Women’s and Children’s Hospital, Adelaide, South Australia, Australia
| | - F. Arrigoni
- Neuroimaging Lab (F.A.), Scientific Institute, Istituto di Ricovero e Cura a Carattere Scientifico Eugenio Medea, Bosisio Parini, Italy
| | - K.A. Aldinger
- Department of Pediatrics (K.A.A.), University of Washington School of Medicine, Seattle, Washington,Center for Integrative Brain Research (K.A.A., W.B.D.), Seattle Children’s Research Institute, Seattle, Washington
| | - R.J. Leventer
- Department of Neurology (R.J.L.), Royal Children’s Hospital and Murdoch Children’s Research Institute, Parkville, Victoria, Australia,Department of Pediatrics (R.J.L.), University of Melbourne, Melbourne, Victoria, Australia
| | - W.B. Dobyns
- Center for Integrative Brain Research (K.A.A., W.B.D.), Seattle Children’s Research Institute, Seattle, Washington,Division of Genetics and Metabolism (W.B.D.), Department of Pediatrics, University of Minnesota, Minneapolis, Minnesota
| | - K. Mankad
- Department of Radiology (S.V.S., K.M.), Great Ormond Street Hospital, NHS Foundation Trust, London, UK
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Sabesan S, Krishnamoorthy K, Hoti S, Subramanian S, Srividya A, Roy N, Jain T, Kumar A, Rahi M. Diethylcarbamazine citrate-fortified salt for lymphatic filariasis elimination in India. Indian J Med Res 2022; 155:347-355. [PMID: 36124509 PMCID: PMC9707683 DOI: 10.4103/ijmr.ijmr_171_22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Lymphatic filariasis (LF) is a vector-borne neglected tropical disease, causing permanent disability. The disease is debilitating and widespread, leading to tremendous productivity and economic loss. The Government of India (GOI) prioritized the elimination of LF through the annual mass drug administration (MDA) programme in 2004 and continued with a single dose of diethylcarbamazine citrate (DEC), 6 mg/kg of body weight, plus albendazole annually over a period of 5-6 years. The GOI had set the target to achieve LF elimination by 2015 and now by 2030. The progress so far has been suboptimal. Much remains to be done as about 84 per cent of the total 328 endemic districts are still under MDA. The major challenge in implementing MDA is poor compliance. It is necessary to have a feasible alternative strategy addressing the above challenge to achieve the desired goal of LF elimination. At this juncture, a well-researched approach, i.e. the use of DEC-fortified salt, also advocated by the World Health Organization, as a unique form of MDA, is proposed. As per this strategy, a low dose of DEC (0.2% w/w) is added to the cooking salt at the manufacturing facility of iodized salt and consumed by the LF-endemic communities for about two years. Many examples of successful use of this strategy for LF elimination in small- and large-scale trials have been documented in India and several other endemic countries in the world. Implementing DEC-iodine-fortified salt is a safe, less expensive, more efficient and prompt approach for achieving the elimination of LF in India. Adverse effects are none or minor and self-limiting. The DEC-fortified salt strategy can easily piggyback on the existing countrywide deployment of iodized salt under the National Iodine Deficiency Disorders Control Programme (NIDDCP), which has achieved a great success in reducing iodine-deficiency disorders such as hypothyroidism. This existing robust programme can be leveraged to launch DEC-fortified salt for the community. If implemented appropriately, this strategy will ensure the complete cessation of LF transmission within two years from its introduction. If the said strategy is implemented in 2022, it is expected that India will be able to achieve the LF elimination by 2024, much before the global target of 2030.
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Affiliation(s)
- S. Sabesan
- Vector Control Research Centre, Puducherry, India
| | | | - S.L. Hoti
- Vector Control Research Centre, Puducherry, India
| | | | - A. Srividya
- Vector Control Research Centre, Puducherry, India
| | - Nupur Roy
- National Centre for Vector-Borne Disease Control, Directorate General of Health Services, Ministry of Health and Family Welfare, Government of India, India
| | - Tanu Jain
- National Centre for Vector-Borne Disease Control, Directorate General of Health Services, Ministry of Health and Family Welfare, Government of India, India
| | | | - Manju Rahi
- Division of Epidemiology & Communicable Diseases, Indian Council of Medical Research, New Delhi, India,For correspondence: Dr Manju Rahi, Division of Epidemiology & Communicable Diseases, Indian Council of Medical Research, New Delhi 110 029, India e-mail:
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21
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Singh S, Anil AG, Khasnabis S, Kumar V, Nath B, Adiga V, Kumar Naik TSS, Subramanian S, Kumar V, Singh J, Ramamurthy PC. Sustainable removal of Cr(VI) using graphene oxide-zinc oxide nanohybrid: Adsorption kinetics, isotherms and thermodynamics. Environ Res 2022; 203:111891. [PMID: 34419468 DOI: 10.1016/j.envres.2021.111891] [Citation(s) in RCA: 38] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Revised: 06/05/2021] [Accepted: 08/12/2021] [Indexed: 05/19/2023]
Abstract
Metal-based adsorbents are limited for hexavalent chromium [Cr(VI)] adsorption from aqueous solutions because of their low adsorption capacities and slow adsorption kinetics. In the present study, decorated zinc oxide (ZnO) nanoparticles (NPs) on graphene oxide (GO) nanoparticles were synthesized via the solvothermal process. The deposition of ZnO NPs on graphene oxide for the nanohybrid (ZnO-GO) improves Cr(VI) mobility in the nanocomposite or nanohybrid, thereby improving the Cr(VI) adsorption kinetics and removal capacity. Surface deposition of ZnO on graphene oxide was characterized through Fourie Transform Infra-red (FTIR), UV-Visible, X-ray Diffraction (XRD), Field Emission Scanning Electron Microscopy (FESEM), Energy Dispersive Spectroscopy (EDS), and Brunauer-Emmett-Teller (BET) techniques. These characterizations suggest the formation of ZnO-GO nanocomposite with a specific area of 32.95 m2/g and pore volume of 0.058 cm2/g. Batch adsorption analysis was carried to evaluate the influence of operational parameters, equilibrium isotherm, adsorption kinetics and thermodynamics. The removal efficiency of Cr(VI) increases with increasing time and adsorbent dosage. FTIR, FESEM and BET analysis before and after the adsorption studies suggest the obvious changes in the surface functionalization and morphology of the ZnO-GO nanocomposites. The removal efficiency increases from high-acidic to neutral pH and continues to decrease under alkaline conditions as well. Mathematical modeling validates that the adsorption follows Langmuir isotherm and fits well with the pseudo 2nd order kinetics (Type 5) model, indicating a homogeneous adsorption process. The thermodynamics study reveals that Cr(VI) adsorption on ZnO-GO is spontaneous, endothermic, and entropy-driven. A negative value of Gibb's Free Energy represents the thermodynamic spontaneity and feasibility of the sorption process. To the best of our knowledge, this is the first study of Cr(VI) removal from aqueous solution using this hybrid nanocomposite at near-neutral pH. The synthesized nanocomposites prove to be excellent candidates for Cr(VI) removal from water bodies and natural wastewater systems.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 56001, India
| | - Amith G Anil
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Sutripto Khasnabis
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Vijay Kumar
- Department of Chemistry, Central Ayurveda Research Institute, Jhansi, U.P, India
| | - Bidisha Nath
- Interdisciplinary Centre for Energy Research, Indian Institute of Science, Bangalore, 56001, India
| | - Varun Adiga
- Interdisciplinary Centre for Energy Research, Indian Institute of Science, Bangalore, 56001, India
| | - T S Sunil Kumar Naik
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - S Subramanian
- Department of Materials Engineering, Indian Institute of Science, Bangalore, 56001, India
| | - Vineet Kumar
- Department of Botany, Guru Ghasidas Vishwavidyalaya, Bilaspur, Chhattisgarh, 495009, India
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Jalandhar, Punjab, 144111, India.
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR), Indian Institute of Science, Bangalore, 56001, India.
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Singh S, Kumar V, Anil AG, Kapoor D, Khasnabis S, Shekar S, Pavithra N, Samuel J, Subramanian S, Singh J, Ramamurthy PC. Adsorption and detoxification of pharmaceutical compounds from wastewater using nanomaterials: A review on mechanism, kinetics, valorization and circular economy. J Environ Manage 2021; 300:113569. [PMID: 34509810 DOI: 10.1016/j.jenvman.2021.113569] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2021] [Revised: 08/05/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
Abstract
Antibiotics overuse, inappropriate conduct, and discharge have led to adverse effects on various ecosystems. The occurrence of antibiotics in surface and drinking water is a matter of global concern. It is responsible for multiple disorders, including disruption of endocrine hormones and high chronic toxicity. The hospitals, pharmaceutical industries, households, cattle farms, and aquaculture are the primary discharging sources of antibiotics into the environment. This review provides complete detail on applying different nanomaterials or nanoparticles for the efficient removal of antibiotics from the diverse ecosystem with a broader perspective. Efforts have been made to focus on the degradation pathways and mechanism of antibiotic degradation using nanomaterials. More light has been shed on applying nanostructures in photocatalysis, which would be an economical and efficient solution. The nanoscale material or nanoparticles have incredible potential for mineralizing pharmaceutical compounds in aqueous solutions at low cost, easy handling characteristics, and high efficacy. Furthermore, nanoparticles can absorb the pharmaceutical by-products and wastes at a minimum cost as they can be easily recycled. With the increasing number of research in this direction, the valorization of pharmaceutical wastes and by-products will continue to expand as we progress from old conventional approaches towards nanotechnology. The utilization of nanomaterials in pharmaceutical wastewater remediation is discussed with a major focus on valorization, energy generation, and minimization and its role in the circular economy creating sustainable development.
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Affiliation(s)
- Simranjeet Singh
- Interdisciplinary Centre for Water Research (ICWaR) Indian Institute of Science, Bangalore, 560012, India
| | - Vijay Kumar
- Department of Chemistry, Regional Ayurveda Research Institute for Drug Development, Madhya Pradesh, 474009, India
| | - Amith G Anil
- Department of Materials Engineering Indian Institute of Science, Bangalore, 560012, India
| | - Dhriti Kapoor
- Department of Botany, Lovely Professional University, Phagwara, Punjab, 144411, India
| | - Sutripto Khasnabis
- Department of Materials Engineering Indian Institute of Science, Bangalore, 560012, India
| | - Shweta Shekar
- Department of Materials Engineering Indian Institute of Science, Bangalore, 560012, India
| | - N Pavithra
- Interdisciplinary Centre for Water Research (ICWaR) Indian Institute of Science, Bangalore, 560012, India
| | - Jastin Samuel
- Department of Microbiology, Lovely Professional University, Phagwara, Punjab, 144411, India
| | - S Subramanian
- Department of Materials Engineering Indian Institute of Science, Bangalore, 560012, India.
| | - Joginder Singh
- Department of Microbiology, Lovely Professional University, Phagwara, Punjab, 144411, India.
| | - Praveen C Ramamurthy
- Interdisciplinary Centre for Water Research (ICWaR) Indian Institute of Science, Bangalore, 560012, India.
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Egonyu J, Subramanian S, Tanga C, Dubois T, Ekesi S, Kelemu S. Global overview of locusts as food, feed and other uses. Global Food Security 2021. [DOI: 10.1016/j.gfs.2021.100574] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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Muss C, Miklosko J, Vladarova M, Subramanian S, Olah M. Building Bridges Between Social Work and Prenatal Psychology. CSWHI 2021. [DOI: 10.22359/cswhi_12_4_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
This issue of Clinical Social Work and Health Intervention is dedicated to decea- sed co-founder of our Journal and President of the International Society of Prenatal and Perinatal Psychology and Medicine, Director of the First Department of Peri- natal Psychology and Medicine, Honorary Doctor and holder of Honorary Degrees and Medals of multiple Universities in Poland, Czechoslovakia, Italy, Malaysia, etc, Doctor of Medicine and Psychology and Editor in chief of four Medical Journ- als: Acta Neurosa Superioris Rediviva, Neuroendocrinology Letters, Clinical Social Work and Health Intervention and Int. Journal of Prenatal and Perinatal Psychology and Medicine (1-4). Together with his spouse Lili Maas, ArtD., who added to the exact science, arts and her heart and love, all of those Journals were not only reading of naked facts and theories, or science but both were teaching us to accept psycho- logy, social work and medicine as art culture and love, what is more than science and knowledge, more than facts. (From the letter of St. Paul and two letters of St. Peter, New Testament)
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Acharya S, Ganesan S, Kumar DV, Subramanian S. A multi-objective multi-verse optimization algorithm for dynamic load dispatch problems. Knowl Based Syst 2021. [DOI: 10.1016/j.knosys.2021.107411] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Suhag A, Yadav H, Chaudhary D, Subramanian S, Jaiwal R, Jaiwal PK. Biotechnological interventions for the sustainable management of a global pest, whitefly (Bemisia tabaci). Insect Sci 2021; 28:1228-1252. [PMID: 32696581 DOI: 10.1111/1744-7917.12853] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2020] [Revised: 06/18/2020] [Accepted: 07/05/2020] [Indexed: 06/11/2023]
Abstract
Whiteflies (Bemisia tabaci) are polyphagous invasive hemipteran insects that cause serious losses of important crops by directly feeding on phloem sap and transmitting pathogenic viruses. These insects have emerged as a major threat to global agriculture and food security. Chemically synthesized insecticides are currently the only option to control whiteflies, but the ability of whiteflies to evolve resistance against insecticides has made the management of these insects very difficult. Natural host-plant resistance against whiteflies identified in some crop plants has not been exploited to a great extent. Genetic engineering approaches, such as transgenics and RNA interference (RNAi), are potentially useful for the control of whiteflies. Transgenic plants harboring insecticidal toxins/lectins developed via nuclear or chloroplast transformation are a promising vehicle for whitefly control. Double-stranded RNAs (dsRNAs) of several insect genes, delivered either through microinjection into the insect body cavity or orally via an artificial diet and transiently or stably expressed in transgenic plants, have controlled whiteflies in model plants and in some crops at the laboratory level, but not at the field level. In this review, we highlight the merits and demerits of each delivery method along with strategies for sustained delivery of dsRNAs via fungal entomopathogen/endosymbiont or nontransgenic RNAi approaches, foliar sprays, root absorption or nanocarriers as well as the factors affecting efficient RNAi and their biosafety issues. Genome sequencing and transcriptome studies of whitefly species are facilitating the selection of appropriate genes for RNAi and gene-editing technology for the efficient and resilient management of whiteflies and their transmitted viruses.
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Affiliation(s)
- Archna Suhag
- Department of Zoology, M.D. University, Rohtak, India
| | - Honey Yadav
- Centre for Biotechnology, M.D. University, Rohtak, India
| | | | - S Subramanian
- Division of Entomology, Indian Agriculture Research Institute, New Delhi, India
| | | | - Pawan K Jaiwal
- Centre for Biotechnology, M.D. University, Rohtak, India
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Sengendo F, Subramanian S, Chemurot M, Tanga CM, Egonyu JP. Efficient Harvesting of Safe Edible Grasshoppers: Evaluation of Modified Drums and Light-Emitting Diode Bulbs for Harvesting Ruspolia differens (Orthoptera: Tettigoniidae) in Uganda. J Econ Entomol 2021; 114:676-683. [PMID: 33704488 DOI: 10.1093/jee/toab025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Indexed: 06/12/2023]
Abstract
Ruspolia differens (Serville) (Orthoptera: Tettigoniidae) is a delicacy in many African countries. It is commonly mass-harvested from the wild using light traps consisting of energy-intensive mercury bulbs which pollute the environment when poorly disposed. The catch is collected using open-ended drums which are inefficient in retaining the insects. The drums also collect nontarget insects including those that produce toxic chemicals (such as pederin) that cause severe burns to human skin. To prevent escape of trapped R. differens, trappers apply potentially hazardous substances like waste cooking oil on the walls of drums. Here, we modified the collection drum by fitting a funnel to retain R. differens; and partitioned it into three compartments with wire meshes of variable sizes to filter nontarget insects. Additionally, we replaced mercury bulbs with light-emitting diode (LED) bulbs which are energy-efficient. We evaluated the performance of the modified R. differens trap (modified drums and LED bulbs) compared to the current collection drums and mercury bulbs. The catch of R. differens in the modified drums was comparable to that of current drums. Nontarget insects were significantly filtered from the catch collected in modified drums compared to the current drums. Further, LED bulbs of 400 W trapped a comparable quantity of R. differens as 400 W mercury bulbs, but with less than half the consumption of electricity compared to the mercury bulbs. We concluded that modified R. differens light traps have better energy-use efficiency and ensure safety to collectors, processors, and consumers.
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Affiliation(s)
- F Sengendo
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
- Department of Zoology, Entomology and Fisheries Sciences, College of Natural Sciences, Makerere University, Kampala, Uganda
| | - S Subramanian
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
| | - M Chemurot
- Department of Zoology, Entomology and Fisheries Sciences, College of Natural Sciences, Makerere University, Kampala, Uganda
| | - C M Tanga
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
| | - J P Egonyu
- International Centre of Insect Physiology and Ecology, Nairobi, Kenya
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Affiliation(s)
- S Subramanian
- Department of Anaesthesia, B. J. Government Medical College, Pune, Maharashtra, India
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Hampton P, Halliday A, Aassi M, Subramanian S, Jain M, Griffiths CEM. Twelve-week secukinumab treatment is consistently efficacious for moderate-to-severe psoriasis regardless of prior biologic and non-biologic systemic treatment: Post hoc analysis of six randomised trials. J Eur Acad Dermatol Venereol 2021; 35:928-937. [PMID: 33030755 PMCID: PMC7986672 DOI: 10.1111/jdv.16982] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2020] [Accepted: 09/22/2020] [Indexed: 01/12/2023]
Abstract
Background The efficacy of biologic therapies is greater among biologic‐naïve vs. biologic‐experienced psoriasis patients. However, little is known as to whether prior use of other systemic therapies impacts secukinumab efficacy in patients with moderate‐to‐severe psoriasis. Objective To investigate the impact of prior exposure to systemic therapies upon the efficacy and safety of secukinumab 300 mg for moderate‐to‐severe psoriasis. Methods Post hoc analysis of six randomised controlled trials (RCTs) comparing secukinumab with placebo, ustekinumab or etanercept at 12 weeks of treatment. Data comparing secukinumab with placebo and ustekinumab were meta‐analysed, while comparisons between secukinumab and etanercept were from a single RCT. Four subgroups of patients were assessed: (i) naïve to non‐biologic systemics (NBS) and biologics; (ii) exposed to NBS but naïve to biologics; (iii) naïve to NBS but exposed to biologics; and (iv) exposed to NBS and biologics. Outcomes of interest included the following: investigator’s global assessment (IGA) score, absolute psoriasis area and severity index (PASI) response, PASI 75, PASI 90 and PASI 100 responses, and dermatology life quality index (DLQI). Safety was also assessed. Results One thousand three hundred and eighty‐three patients were included in the secukinumab vs. placebo meta‐analysis: 1776 in the secukinumab vs. ustekinumab meta‐analysis and 653 in the within‐trial analyses of secukinumab vs. etanercept. For all subgroups, secukinumab was significantly more efficacious than placebo for all outcomes measured. Secukinumab generated greater responses in biologic‐naïve patients, while prior NBS had a negligible impact on treatment response. Furthermore, secukinumab was more efficacious than both ustekinumab and etanercept on many outcomes, with an even greater difference for biologic‐naïve than biologic‐exposed patients. Safety results were consistent with individual clinical trial results. Conclusions Twelve‐week treatment with secukinumab 300 mg is consistently more efficacious than placebo, etanercept and ustekinumab in patients with moderate‐to‐severe psoriasis, regardless of prior exposure to biologics or NBS. Secukinumab had a comparable safety profile to both etanercept and ustekinumab.
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Affiliation(s)
- P Hampton
- Newcastle Dermatology, Newcastle Hospitals NHS Trust, Newcastle Upon Tyne, UK
| | - A Halliday
- Novartis Pharmaceuticals UK Limited, Surrey, UK
| | - M Aassi
- Novartis Pharma AG, Basel, Switzerland
| | | | - M Jain
- Novartis Healthcare Pvt. Ltd, Hyderabad, India
| | - C E M Griffiths
- Centre for Dermatology, The University of Manchester and NIHR Manchester Biomedical Research Centre, Manchester, UK
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Anil AG, Sunil Kumar Naik T, Subramanian S, Ramamurthy PC. A novel non-enzymatic urea sensor based on the nickel complex of a benzimidazoyl pyridine derivative. J Electroanal Chem (Lausanne) 2021. [DOI: 10.1016/j.jelechem.2021.115062] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Ilamurugu A, Chandrasekaran A, Ayyalusamy A, Prasanna Satpathy S, Reddy JM, Arora S, Subramanian S, Velayudham R. Volumetric and dosimetric impact of MRI in delineation of gross tumor volume of non-spinal vertebral metastases treated with stereotactic ablative radiation therapy. Cancer Radiother 2021; 25:135-140. [PMID: 33422419 DOI: 10.1016/j.canrad.2020.06.032] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2019] [Revised: 10/16/2019] [Accepted: 06/16/2020] [Indexed: 12/31/2022]
Abstract
PURPOSE To investigate the Gross Tumor Volumes (GTV) and its dosimetric impact of magnetic resonance imaging (MRI) assisted contouring for non-spinal metastasis treated with stereotactic ablative body radiotherapy (SABR). MATERIAL AND METHODS Five observer contours on CT (GTVCT) and CT+MR (GTVCT+MR) were evaluated against expert team contours (GTVEC) for 14 selected cases. Dice Similarity Index (DSC) and Geographical Miss Index (GMI) quantify observer variation. We also analyze the maximum dose (Dmax) and dose received by 0.35cc (D0.35cc) of the spinal cord (SC) for GTVCT and GTVCT+MR, where optimization parameters and priorities were unchanged. Percent rank function is also evaluated for SC doses. RESULTS The mean DSC and GMI scores for the CT-only dataset are 0.6974 and 0.2851 and for CT+MR dataset is 0.7764 and 0.1907 respectively. Statistically, significant results were found for mean GTV volumes between GTVEC versus GTVCT and GTVCT versus GTVCT+MR (P<0.001). Dosimetric analysis of Dmax and D0.35cc exceeded 84.2% and 88.5% of times its respective threshold doses for CT-only dataset, whereas for the CT+MR dataset, it exceeded only by 18% and 15.7% times. 'Percent rank' function analysis for SC doses also indicates the same. CONCLUSION This study supports MRI fusion for GTV and OAR delineation for non-spinal metastasis. Our study showed that the dosimetric analysis is vital for observer variation studies and the addition of the MR data set is significant to improve the confidence of Stereotactic treatments.
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Affiliation(s)
- A Ilamurugu
- Department of Radiation Oncology, Yashoda Hospitals, Hyderabad, India; School of Advanced Sciences, Vellore Institute of Technology, Vellore, India.
| | - A Chandrasekaran
- School of Advanced Sciences, Vellore Institute of Technology, Vellore, India
| | - A Ayyalusamy
- Department of Radiation Oncology, Yashoda Hospitals, Hyderabad, India
| | | | - J M Reddy
- Department of Radiation Oncology, Yashoda Hospitals, Hyderabad, India
| | - S Arora
- Department of Radiation Oncology, Yashoda Hospitals, Hyderabad, India
| | - S Subramanian
- Department of Radiation Oncology, Yashoda Hospitals, Hyderabad, India
| | - R Velayudham
- School of Advanced Sciences, Vellore Institute of Technology, Vellore, India
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Rhodes JM, Subramanian S, Laird E, Griffin G, Kenny RA. Perspective: Vitamin D deficiency and COVID-19 severity - plausibly linked by latitude, ethnicity, impacts on cytokines, ACE2 and thrombosis. J Intern Med 2021; 289:97-115. [PMID: 32613681 PMCID: PMC7361294 DOI: 10.1111/joim.13149] [Citation(s) in RCA: 147] [Impact Index Per Article: 49.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/03/2020] [Revised: 06/16/2020] [Accepted: 06/23/2020] [Indexed: 02/06/2023]
Abstract
BACKGROUND SARS-CoV-2 coronavirus infection ranges from asymptomatic through to fatal COVID-19 characterized by a 'cytokine storm' and lung failure. Vitamin D deficiency has been postulated as a determinant of severity. OBJECTIVES To review the evidence relevant to vitamin D and COVID-19. METHODS Narrative review. RESULTS Regression modelling shows that more northerly countries in the Northern Hemisphere are currently (May 2020) showing relatively high COVID-19 mortality, with an estimated 4.4% increase in mortality for each 1 degree latitude north of 28 degrees North (P = 0.031) after adjustment for age of population. This supports a role for ultraviolet B acting via vitamin D synthesis. Factors associated with worse COVID-19 prognosis include old age, ethnicity, male sex, obesity, diabetes and hypertension and these also associate with deficiency of vitamin D or its response. Vitamin D deficiency is also linked to severity of childhood respiratory illness. Experimentally, vitamin D increases the ratio of angiotensin-converting enzyme 2 (ACE2) to ACE, thus increasing angiotensin II hydrolysis and reducing subsequent inflammatory cytokine response to pathogens and lung injury. CONCLUSIONS Substantial evidence supports a link between vitamin D deficiency and COVID-19 severity but it is all indirect. Community-based placebo-controlled trials of vitamin D supplementation may be difficult. Further evidence could come from study of COVID-19 outcomes in large cohorts with information on prescribing data for vitamin D supplementation or assay of serum unbound 25(OH) vitamin D levels. Meanwhile, vitamin D supplementation should be strongly advised for people likely to be deficient.
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Affiliation(s)
- J. M. Rhodes
- From theDepartment of Cellular and Molecular PhysiologyInstitute of Translational MedicineUniversity of LiverpoolLiverpoolUK
| | - S. Subramanian
- From theDepartment of Cellular and Molecular PhysiologyInstitute of Translational MedicineUniversity of LiverpoolLiverpoolUK
| | - E. Laird
- The Irish Longitudinal Study on AgeingSchool of MedicineTrinity College DublinDublinIreland
| | - G. Griffin
- Infectious Diseases and MedicineSt George’sUniversity of LondonLondonUK
| | - R. A. Kenny
- Department of Medical GerontologyMercers Institute for AgeingSt James HospitalDublin 8Ireland
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Babu G, Bahl A, Bhattacharya GS, Bhowmik KT, Dattatraya PS, Ghadyalpatil N, Karandikar SM, Kulkarni P, Sridharan N, Parikh P, Prabhash K, Raja T, Rajasundaram S, Subramanian S, Talapatra K, Vaid A. Oncology Gold Standard ® practical consensus recommendations for the use of monoclonal antibodies in the management of squamous cell carcinoma of head and neck. South Asian J Cancer 2020; 6:154-160. [PMID: 29404293 PMCID: PMC5763625 DOI: 10.4103/sajc.sajc_181_17] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
We present the 2017 Oncology Gold Standard Practical Consensus Recommendation for use of monoclonal antibodies in the management of advanced squamous cell carcinoma of head neck region.
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Affiliation(s)
- Govind Babu
- Department of Medical Oncology, Kidwai Memorial Institute of Oncology, Bengaluru, Karnataka, India
| | - Ankur Bahl
- Department of Medical Oncology, Max Hospital, New Delhi, India
| | - G S Bhattacharya
- Department of Medical Oncology, Fortis Hospital, Kolkata, West Bengal, India
| | - K T Bhowmik
- Department of Radiation Oncology, Safdarjung Hospital, New Delhi, India
| | - P S Dattatraya
- Department of Medical Oncology, Omega Hospital, Hyderabad, Telangana, India
| | - Nikhil Ghadyalpatil
- Department of Medical Oncology, Yashoda Hospitals, Hyderabad, Telangana, India
| | - S M Karandikar
- Department of Medical Oncology, Ruby Hall Clinic, Pune, Maharashtra, India
| | - Padmaj Kulkarni
- Department of Medical Oncology, Deenanath Mangeshkar Hospital, Pune, Maharashtra, India
| | - Nithya Sridharan
- Department of Medical Oncology, VS Hospital, Chennai, Tamil Nadu, India
| | - Purvish Parikh
- Department of Precision Oncology, Asian Cancer Institute, Mumbai, Maharashtra, India
| | - Kumar Prabhash
- Department of Medical Oncology, Tata Memorial Hospital, Mumbai, Maharashtra, India
| | - T Raja
- Department of Medical Oncology, Apollo Speciality Hospital, Chennai, Tamil Nadu, India
| | - S Rajasundaram
- Department of Surgical Oncology, Global Institute of Oncology, Chennai, Tamil Nadu, India
| | - S Subramanian
- Department of Medical Oncology, VS Hospital, Chennai, Tamil Nadu, India
| | - Kaustav Talapatra
- Department of Radiation Oncology, KDA Hospital, Mumbai, Maharashtra, India
| | - Ashok Vaid
- Department of Medical Oncology, Medanta Hospital, Gurugram, Haryana, India
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Aarthi M, Subramanian S, Krishnan P. Colistin resistance among multidrug resistant gram negative bacteria isolated from cancer patients from Chennai, South India. Int J Infect Dis 2020. [DOI: 10.1016/j.ijid.2020.09.136] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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Vellaiyan S, Subramanian S, Ayyalusamy A, Kantapalayem K, Kumar B. Feasibility of Deformed MR Contours in Stereotactic Body Radiotherapy of Liver. Int J Radiat Oncol Biol Phys 2020. [DOI: 10.1016/j.ijrobp.2020.07.2396] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Abstract
The world has continued to change rapidly since the last version of this article was written on May 20, 2020. Yet, as this article goes to press, we are aware of two realities; first, that we cannot perennially chase a moving target, but second, that nothing about the fundamental trends that we have identified appear to have changed. India is firmly in the throes of a vicious pandemic that we can only hope will abate with the development of an effective vaccine. Our plea for the widespread provision of adequate health and medical facilities, adequate protection for the elderly, and transfers to those severely affected by the lockdown are absolutely unchanged in the face of the latest data. In contrast, the brutal enforcement of a lockdown with none of these accompanying measures can only worsen outcomes for the poorest and most vulnerable among the population.
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Affiliation(s)
- Debraj Ray
- New York University and University of Warwick, New York, USA
| | - S Subramanian
- New York University and University of Warwick, New York, USA
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Zainol N, Subramanian S, Adnan A, Zulkifli N, Zain A, Kassim N, Kamarudin A. The potential source for composite flours as food ingredient from local grown crops. Food Res 2020. [DOI: 10.26656/fr.2017.4(s2).s11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The market of composite flour is growing as consumer nowadays choosing a healthy diet
as personal preference. The suitability of the composite flour for use as intermediate or
finish food ingredients highly depends on its physicochemical properties and its
nutritional value. In this study, four types of local fruit crops (particularly their seeds)
namely rambutan, cempedak, durian and nangka were dried and ground into powder
form. The physicochemical properties such as bulk density, pH, water absorption capacity
(WAC), oil absorption capacity (OAC), foam stability (FS), foam capacity (FC) as well as
gelatinization properties of these composite flour were studied. Mineral content and heavy
metal analytes were also determined. Results for bulk density from the least to the higher
amount was 0.54±0.00 g/mL, 0.57±0.00 g/mL, 0.58±0.01 g/mL, 0.66±0.00 g/mL ,
0.70±0.00 g/mL and 0.72±0.00 g/mL for rambutan flour, cempedak flour, tapioca flour,
nangka flour, wheat flour and durian flour, respectively. Both cempedak flour and nangka
flour showed the lowest pH value (5.72±0.01, 5.73±0.00), followed by rambutan flour and
durian flour (6.67±0.00, 6.90±0.00) which similar to that tapioca flour and wheat flour
(6.65±0.1, 6.08±0.0), respectively. Rambutan flour, cempedak flour and wheat flours
showed the highest value in% of foam stability meanwhile these composite flours showed
the lowest value in% of foam capacity. Results for water absorption capacity (WAC) and
oil absorption capacity (OAC) in a range of 6% to 42% and 8% to 12% respectively,
however, durian flour obtained the highest value for WAC while the value for OAC was
the lowest. All of the composite flour possesses gelling properties at 13% concentration
except for cempedak flour which completely gels at 20% of concentration. Rambutan
flour showed the highest mineral analyte particularly in Zinc (107.19±0.17) and Copper
(14.22±0.27) followed by nangka flour [Zinc (64.20±0.32) and Copper (10.40±0.12)] and
durian flour [Zinc (52.38±0.42) and Copper (7.97±0.05)]. Level of heavy metal toxicity
was under risk for all types of composite flour.
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Duhlian L, Koramutla MK, Subramanian S, Chamola R, Bhattacharya R. Comparative transcriptomics revealed differential regulation of defense related genes in Brassica juncea leading to successful and unsuccessful infestation by aphid species. Sci Rep 2020; 10:10583. [PMID: 32601289 PMCID: PMC7324606 DOI: 10.1038/s41598-020-66217-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Accepted: 05/18/2020] [Indexed: 11/09/2022] Open
Abstract
Productivity of Indian mustard (B. juncea), a major oil yielding crop in rapeseed-mustard group is heavily inflicted by mustard aphid, L. erysimi. Mustard aphid, a specialist aphid species on rapeseed-mustard crops, rapidly multiplies and colonizes the plants leading to successful infestation. In contrary, legume specific cowpea aphid, A. craccivora when released on B. juncea plants fails to build up population and thus remains unsuccessful in infestation. In the present study, differential host response of B. juncea to the two aphid species, one being successful insect-pest and the other being unsuccessful on it has been studied based on transcriptome analysis. Differential feeding efficiency of the two aphid species on mustard plants was evident from the amount of secreted honeydews. Leaf-transcriptomes of healthy and infested plants, treated with the two aphid species, were generated by RNA sequencing on Illumina platform and de novo assembly of the quality reads. A comparative assessment of the differentially expressed genes due to treatments revealed a large extent of overlaps as well as distinctness with respect to the set of genes and their direction of regulation. With respect to host-genes related to transcription factors, oxidative homeostasis, defense hormones and secondary metabolites, L. erysimi led to either suppression or limited activation of the transcript levels compared to A. craccivora. Further, a comprehensive view of the DEGs suggested more potential of successful insect-pests towards transcriptional reprogramming of the host. qRT-PCR based validation of randomly selected up- and down-regulated transcripts authenticated the transcriptome data.
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Affiliation(s)
- Lianthanzauva Duhlian
- ICAR-National Institute for Plant Biotechnology, Indian Agricultural Research Institute Campus, New Delhi, 110012, India
| | - Murali Krishna Koramutla
- ICAR-National Institute for Plant Biotechnology, Indian Agricultural Research Institute Campus, New Delhi, 110012, India
| | - S Subramanian
- Division of Entomology, Indian Agricultural Research Institute, New Delhi, 110012, India
| | - Rohit Chamola
- ICAR-National Institute for Plant Biotechnology, Indian Agricultural Research Institute Campus, New Delhi, 110012, India
| | - Ramcharan Bhattacharya
- ICAR-National Institute for Plant Biotechnology, Indian Agricultural Research Institute Campus, New Delhi, 110012, India.
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Kiliyanpilakkil VB, Subramanian S. Fracture of femoral component in an Oxford ® unicompartmental knee replacement with displaced posterior fragment: a case report. Ann R Coll Surg Engl 2020; 102:e148-e151. [PMID: 32233923 DOI: 10.1308/rcsann.2020.0064] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Femur component fracture is very rare with Oxford® unicompartmental knee replacement. We report a case from the UK with displacement and rotation of the broken femoral component posterior to the peg. Potential predisposing factors include polywear with metal on metal articulation. The patient had excellent results following revision arthroplasty.
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Shi G, Subramanian S, Cao Q, Demehri S, Siewerdsen JH, Zbijewski W. Application of a Novel Ultra-High Resolution Multi-Detector CT in Quantitative Imaging of Trabecular Microstructure. Proc SPIE Int Soc Opt Eng 2020; 11317:113171E. [PMID: 33597792 PMCID: PMC7885907 DOI: 10.1117/12.2552385] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
PURPOSE To evaluate the performance of a novel ultra-high resolution multi-detector CT scanner (Canon Aquilion Precision UHR CT), capable of visualizing ~150 μm details, in quantitative assessment of bone microarchitecture. Compared to conventional CT, the spatial resolution of UHR CT begins to approach the size of the trabeculae. This might enable measurements of microstructural correlates of osteoporosis, osteoarthritis, and other bone disease. METHODS The UHR CT system features a 160-row x-ray detector with 250×250 μm pixels (measured at isocenter) and a custom-designed x-ray source with a 0.4×0.5 mm focal spot. Visualization of high contrast details down to ~150 μm has been achieved on this device, which is now commercially available for clinical use. To evaluate the performance of UHR CT in quantification of bone microstructure, we imaged a variety of human bone samples (including ulna, radius, and vertebrae) embedded in a ~16 cm diameter plastic cylinder and in an anthropomorphic thorax phantom (QRM-Thorax, QRM Gmbh). Helical UHR CT acquisitions (120 kVp tube voltage) were acquired at scan exposures of 375 mAs - 5 mAs. For comparison, the samples were also imaged using a Normal Resolution (NR) mode available on the scanner, involving 500 μm slice thickness, exposure of 50 mAs, and a focal spot of 0.6×1.3 mm. We obtained micro-CT (μCT) of the bone samples at ~28 μm voxel size as a gold-standard reference. Geometric measurements of bone microstructure were performed in 17 regions-of-interests (ROIs) distributed throughout the bones of the phantoms; image registration was used to place the ROIs at corresponding locations in the UHR CT and NR CT. Trabecular thickness Tb.Th, spacing Tb.Sp, and Bone Volume fraction BvTv were obtained. The UHR and NR imaging protocols were compared terms of correlations to μCT and error of trabecular measurements. The effect of dose on trabecular morphometry was also studied for the UHR CT. Furthermore, we evaluated the sensitivity of texture features of trabecular bone (recently proposed as an alternative to geometric indices of microstructure) to imaging protocol. Image texture evaluation was performed using ~150 regions of interest (ROIs) across all bone samples. Three-dimensional Gray Level Co-occurrence Matrix (GLCM) and Gray Level Run Length Matrix (GLRM) features were extracted for each ROI. We analyzed correlation and concordance correlation coefficient (CCC) of the mean ROI values of texture features obtained using the UHR and NR modes. RESULTS UHR CT reconstructions of bone samples clearly demonstrated improved visualization of the trabeculae compared to NR CT. UHR CT achieved substantially better correlations for all three metrics of bone microstructure, in particular for BvTv (correlation coefficient of 0.91 for UHR CT compared to 0.84 for NR CT) and TbSp (correlation of 0.74 for UHR CT and 0.047 for NR CT). The error obtained with UHR CT was generally smaller than that of NR CT. For TbSp, the mean deviation from μCT (averaged across all bone samples) was only ~0.07 for UHR CT, compared to 0.25 for NR CT. Analysis of reproducibility of texture features of trabecular bone between UHR CT and NR CT revealed fair correlations (>0.7) for the majority of GLCM features, but relatively poor CCC (e.g. 0.02 for Energy and 0.04 for Entropy). The magnitude of texture metrics is particularly affected by the enhanced spatial resolution of UHR CT. CONCLUSION The recently introduced UHR CT achieves improved correlation and reduced error in measurements of trabecular bone microstructure compared to conventional resolution CT. Future development of diagnostic strategies based on textural biomarkers derived from UHR CT will need to account for potential sensitivity of texture features to image resolution.
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Affiliation(s)
- G Shi
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA 21205
| | - S Subramanian
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA 21205
| | - Q Cao
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA 21205
| | - S Demehri
- Russell H. Morgan Department of Radiology, Johns Hopkins University, Baltimore, MD USA 21287
| | - J H Siewerdsen
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA 21205
- Russell H. Morgan Department of Radiology, Johns Hopkins University, Baltimore, MD USA 21287
| | - W Zbijewski
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA 21205
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Usharani NJ, Shringi R, Sanghavi H, Subramanian S, Bhattacharya SS. Role of size, alio-/multi-valency and non-stoichiometry in the synthesis of phase-pure high entropy oxide (Co,Cu,Mg,Na,Ni,Zn)O. Dalton Trans 2020; 49:7123-7132. [DOI: 10.1039/d0dt00958j] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Presence of multivalency/non-stoichiometry to accommodate a different-sized cation and maintaining electroneutrality were identified as the critical criteria for single-phase formation in multicomponent/high entropy systems.
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Affiliation(s)
- Nandhini J. Usharani
- Nano Functional Materials Technology centre
- (NFMTC)
- Department of Metallurgical and Materials engineering
- Indian Institute of Technology Madras
- Chennai-600036
| | - Rajat Shringi
- Nano Functional Materials Technology centre
- (NFMTC)
- Department of Metallurgical and Materials engineering
- Indian Institute of Technology Madras
- Chennai-600036
| | - Harshil Sanghavi
- Nano Functional Materials Technology centre
- (NFMTC)
- Department of Metallurgical and Materials engineering
- Indian Institute of Technology Madras
- Chennai-600036
| | - S. Subramanian
- Sophisticated Analytical Instrument Facility
- Indian Institute of Technology Madras
- Chennai-600036
- India
| | - S. S. Bhattacharya
- Nano Functional Materials Technology centre
- (NFMTC)
- Department of Metallurgical and Materials engineering
- Indian Institute of Technology Madras
- Chennai-600036
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Kalatova D, Subramanian S, Luliak M, Gulasova M, Jancovic M, Prochazkova K, Hupkova I, Otrubova J, Libova L, Katunska M, Popovicova M, Topolska A, Sramkova M, Hofbauerova B, Murgova A, Kimuli D. Psychosocial and Medical Intervention before Emergency Travel in Humanitarian Workers – How early is not too late? cswhi 2019. [DOI: 10.22359/cswhi_10_4_05] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Subramanian S, Brehler M, Cao Q, Quevedo Gonzalez FJ, Breighner RE, Carrino JA, Wright T, Yorkston J, Siewerdsen JH, Zbijewski W. Quantitative Evaluation of Bone Microstructure using High-Resolution Extremity Cone-Beam CT with a CMOS Detector. Proc SPIE Int Soc Opt Eng 2019; 10953. [PMID: 31814656 DOI: 10.1117/12.2515504] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
Purpose A high-resolution cone-beam CT (CBCT) system for extremity imaging has been developed using a custom complementary metal-oxide-semiconductor (CMOS) x-ray detector. The system has spatial resolution capability beyond that of recently introduced clinical orthopedic CBCT. We evaluate performance of this new scanner in quantifying trabecular microstructure in subchondral bone of the knee. Methods The high-resolution scanner uses the same mechanical platform as the commercially available Carestream OnSight 3D extremity CBCT, but replaces the conventional amorphous silicon flat-panel detector (a-Si:H FPD with 0.137 mm pixels and a ~0.7 mm thick scintillator) with a Dalsa Xineos3030 CMOS detector (0.1 mm pixels and a custom 0.4 mm scintillator). The CMOS system demonstrates ~40% improved spatial resolution (FWHM of a ~0.1 mm tungsten wire) and ~4× faster scan time than FPD-based extremity CBCT (FPD-CBCT). To investigate potential benefits of this enhanced spatial resolution in quantitative assessment of bone microstructure, 26 trabecular core samples were obtained from four cadaveric tibias and imaged using FPD-CBCT (75 μm voxels), CMOS-CBCT (75 μm voxels), and reference micro-CT (μCT, 15 μm voxels). CBCT bone segmentations were obtained using local Bernsen's thresholding combined with global histogram-based pre-thresholding; μCT segmentation involved Otsu's method. Measurements of trabecular thickness (Tb.Th), spacing (Tb.Sp), number (Tb.N) and bone volume (BV/TV) were performed in registered regions of interest in the segmented CBCT and μCT reconstructions. Results CMOS-CBCT achieved noticeably improved delineation of trabecular detail compared to FPD-CBCT. Correlations with reference μCT for metrics of bone microstructure were better for CMOS-CBCT than FPD-CBCT, in particular for Tb.Th (increase in Pearson correlation from 0.84 with FPD-CBCT to 0.96 with CMOS-CBCT) and Tb.Sp (increase from 0.80 to 0.85). This improved quantitative performance of CMOS-CBCT is accompanied by a reduction in scan time, from ~60 sec for a clinical high resolution protocol on FPD-CBCT to ~17 sec for CMOS-CBCT. Conclusion The CMOS-based extremity CBCT prototype achieves improved performance in quantification of bone microstructure, while retaining other diagnostic capabilities of its FPD-based precursor, including weight-bearing imaging. The new system offers a promising platform for quantitative imaging of skeletal health in osteoporosis and osteoarthritis.
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Affiliation(s)
- S Subramanian
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA
| | - M Brehler
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA
| | - Q Cao
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA
| | | | - R E Breighner
- Department of Radiology and Imaging, Hospital for Special Surgery, New York, NY USA
| | - J A Carrino
- Department of Radiology and Imaging, Hospital for Special Surgery, New York, NY USA
| | - T Wright
- Biomechanics Laboratory, Hospital for Special Surgery, New York, NY USA
| | | | - J H Siewerdsen
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA.,Russell H. Morgan Department of Radiology, Johns Hopkins University, Baltimore, MD USA
| | - W Zbijewski
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD USA
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Kumar Chandel R, M. Nebapure S, Sharma M, Subramanian S, Srivastava C, Paul Khurana S. INSECTICIDAL AND REPELLENT ACTIVITIES OF EUCALYPTUS OIL AGAINST LESSER GRAIN BORER RHYZOPERTHA DOMINICA (FABRICIUS). J microb biotech food sci 2019. [DOI: 10.15414/jmbfs.2019/20.9.3.525-529] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Lesser grain borer Rhyzopertha dominica (F.) is a destructive insect pest of stored grains. Both larvae and adults of the pest attack whole, sound grain and cause extensive damage. Larvae are internal feeders whereas adults are free living and bore into the commodity and can fly. Fumigation is the most useful and effective method to manage this insect pest. There are several insecticides available in the market to manage this pest but some insecticides have been banned because of environmental pollutions and for some insecticides this insect pest has developed resistance. Therefore efforts are required to find safe, effective and viable alternatives. Natural products are well known to have a range of useful biological properties against insect pests. Recently, there has been considerable interest in essential oils and extracts of medicinal and edible plant and herbs for the development of alternative insecticides and fumigants. This research was initiated to evaluate the fumigation toxicity and repellent action of Eucalyptus globulus Labill essential oil against adults of R. dominica. GC/MS analysis showed the major components of E. globulus essential oil as 1,8-cineole (22.35%), α-pinene (12.58%) limonene (4.01%), aristolene (3.35%), p-cymene (3.25%), trans-verbenol (3.02%), isosativene (2.85%), α-myrcene (2.15%) and terpinen-4-ol (2.10%). Fumigation toxicity and repellent activity showed that as the concentration and exposure time increased the mortality and repellency also increased. Maximum repellency of 62.0% was observed at 0.32μl/cm2 concentration after 36 hours of exposure.
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Prabhakaran DC, Bolaños-Benitez V, Sivry Y, Gelabert A, Riotte J, Subramanian S. Mechanistic studies on the bioremediation of Cr(VI) using Sphingopyxis macrogoltabida SUK2c, a Cr(VI) tolerant bacterial isolate. Biochem Eng J 2019. [DOI: 10.1016/j.bej.2019.107292] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Rajesh A, Mangamma G, Sairam T, Subramanian S. Probing host-guest interactions in hydroxyapatite intercalated graphene oxide nanocomposite: NMR and scanning probe microscopy studies. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.136636] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Straub P, Tanga C, Osuga I, Windisch W, Subramanian S. Experimental feeding studies with crickets and locusts on the use of feed mixtures composed of storable feed materials commonly used in livestock production. Anim Feed Sci Technol 2019. [DOI: 10.1016/j.anifeedsci.2019.114215] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Subramanian S. The Emergence of Principal–Agent– Principal Model in India: The Case of Infosys Ltd. IIM Kozhikode Society & Management Review 2019. [DOI: 10.1177/2277975219836536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Affiliation(s)
- S. Subramanian
- Indian Institute of Management Kozhikode (IIMK), Kozhikode, Kerala, India
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Sebastian S, Myers S, Nadir S, Subramanian S. Systematic Review: Efficacy and Safety of Accelerated Induction Regimes in Infliximab Rescue Therapy for Hospitalized Patients with Acute Severe Colitis. Dig Dis Sci 2019; 64:1119-1128. [PMID: 30535888 DOI: 10.1007/s10620-018-5407-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Accepted: 11/29/2018] [Indexed: 12/13/2022]
Abstract
BACKGROUND Pharmacokinetic data suggest that standard induction dosing schedules may not be sufficient in patients with acute severe colitis (ASUC). Hence, intensified induction regimes are increasingly used in the rescue treatment of hospitalized patients with ASUC to avoid the need for colectomy although the evidence for this is uncertain. AIM To conduct a systematic review of short- and long-term efficacy outcomes from accelerated infliximab induction studies. METHODS Systematic search of relevant databases (MEDLINE, EMBASE, Cochrane Database of Systematic Reviews) and relevant conference proceedings (Digestive Diseases Week, European Colitis and Crohn's Organisation Congress, United European Gastroenterology Week) was done. RESULTS We identified ten relevant studies with a total of 705 patients, of whom 308 received an intensified infliximab regime. Pooled analysis showed no difference in short-term or long-term colectomy rates in those receiving accelerated induction regimes when compared to standard induction. No significant differences in complication rates were identified. CONCLUSIONS The available uncontrolled studies so far do not suggest short-term or long-term benefit in using accelerated induction in hospitalized ASUC. The overall poor quality of available studies with confounding variables indicates the need for a randomized controlled trial with personalized risk stratification.
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Affiliation(s)
- S Sebastian
- IBD Unit, Hull and East Yorkshire NHS Trust, Hull, UK. .,Hull York Medical School, Hull, UK.
| | - S Myers
- IBD Unit, Hull and East Yorkshire NHS Trust, Hull, UK
| | - S Nadir
- IBD Unit, Hull and East Yorkshire NHS Trust, Hull, UK
| | - S Subramanian
- The Royal Liverpool and Broad Green University Hospitals NHS Foundation Trust, Liverpool, UK
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Singireddy A, Pedireddi SR, Subramanian S. Optimization of reaction parameters for synthesis of Cyclodextrin nanosponges in controlled nanoscopic size dimensions. J Polym Res 2019. [DOI: 10.1007/s10965-019-1754-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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