Stimulated phytoextraction of metals from fly ash by microbial interventions

Various combinations of fly ash tolerant bacteria isolated from the rhizospheric zone of Typha latifolia naturally growing on a fly ash dump site were tested for enhanced metal uptake by Brassica juncea grown in fly ash amended with press mud. After enrichment of the bacteria in a nutrient broth, they were subsequently applied to the rhizospheric zone of B. juncea in different combinations. When the metal analysis was done in the plants at their maturity, it was revealed that out of 11 bacterial consortia prepared from the different combinations of four bacterial strains, Micrococcus roseus NBRFT2 (MTCC 9018), Bacillus endophyticus NBRFT4 (MTCC 9021), Paenibacillus macerans NBRFT5 (MTCC 8912) and Bacillus pumilus NBRFT9 (MTCC 8913), a combination of NBRFT5, NBRFT4 and NBRFT9 (ST3) was found to have induced the highest metal accumulations as compared to other consortia. The bioaugmentation of the ST3 consortium enhanced Fe accumulation by 247%, Ni by 231% and Zn by 223% in B. juncea as compared to control plants. These values were found to be significantly higher than the other bacterial consortia. Bacteria were also found to produce siderophores which could enhance the metal uptake by plants through metal mobilization. Besides siderophores, bacteria are also known to produce protons, organic acids and enzymes which enhance the metal mobilization and boost the phytoextraction process. The translocation of metals from root to stem was invariably higher than from stem to leaf. Hence, ST3 was adjudged the best consortium to be used in the field application to accelerate the phytoextraction of metals from fly ash by B. juncea.

[Ecological effects of wheat-oilseed rape intercropping combined with methyl salicylate release on Sitobion avenae and its main natural enemies]

In order to explore the effects of wheat-oilseed rape intercropping in combining with methyl salicylate (MeSA) release on Sitobion avenae and its main natural enemies, a field experiment was conducted at the Tai'an Experimental Station of Shandong Agricultural University in East China from October 2008 to June 2010 to study the temporal dynamics of S. avenae and its main natural enemies as well as the ecological control effect on the aphid. In the plots of intercropping combined with MeSA release, the S. avenae apterae population reached a peak about 12 d in advance of the control, but the peak value was significantly lower than that of the control. The average annual number of S. avenae apterae per 100 wheat tillers decreased in the order of wheat monoculture > wheat-oilseed rape intercropping > MeSA release > wheat-oilseed rape intercropping combined with MeSA release. Moreover, the total number of ladybeetles was the highest in the plots of intercropping combined with MeSA release. The population densities of aphid parasitoids reached a peak about 10 d in advance of the control, which could play a significant role in controlling S. avenae at the filling stage of wheat. Taking the biological control index (BCI) as a quantitative indicator, and with the ladybeetles and parasitoids as the dominant control factors in fields, it was observed that wheat-oilseed rape intercropping combined with MeSA release could suppress the population increase of S. avenae apterae effectively from the heading to filling stages of wheat.

[Allelopathic effects of Streptomyces sp. 6803 on plants]

Streptomyces can produce an overwhelming majority of known antibiotics and several biologically active compounds, but whether Streptomyces can display allelopathic effects on higher plants is largely unknown. In this study, seven actinomyces strains isolated from soils showed inhibitory effect on plant seedlings growth, among which, Streptomyces sp. 6803 had strong capability in inhibiting the seedlings growth of Brassica campestris and Echinochloa crusgalli in both solid and liquid cultures. The dilute solution (x 5) of fermented broth inhibited the seedlings growth of B. campestris and E. crusgalli by 60.7% and 61.3%, respectively. Based on the morphological and physiological-biochemical characteristics and 16S rRNA sequencing, Streptomyces sp. 6803 was identified as Streptomyces arenae, with the 16S rRNA sequence identity being 99.28%. Ultraviolet radiation and diethyl sulfate (DES) were used to produce mutants to enhance the allelopathic potential of this strain. After 80 and 100 seconds of ultraviolet radiation, the dilute solution (x10) of fermented broth of obtained mutants UV8024 and UV100-2 showed 37.5% and 38.1% higher inhibition effect on the root growth of B. campestris seedlings, respectively, compared with the control. The mutant D507 obtained through 1% DES treatment for 50 min showed 29.8% higher inhibition effect on the root growth of B. campestris seedlings. This study showed that Streptomyces sp. 6803 had allelopathic effect on higher plants, and it was possible to enhance the allelopathic potential of the strain via mutation breeding.

Tungsten toxicity, bioaccumulation, and compartmentalization into organisms representing two trophic levels

Metallic tungsten has civil and military applications and was considered a green alternative to lead. Recent reports of contamination in drinking water and soil have raised scrutiny and suspended some applications. This investigation employed the cabbage Brassica oleracae and snail Otala lactea as models to determine the toxicological implications of sodium tungstate and an aged tungsten powder-spiked soil containing monomeric and polymeric tungstates. Aged soil bioassays indicated cabbage growth was impaired at 436 mg of W/kg, while snail survival was not impacted up to 3793 mg of W/kg. In a dermal exposure, sodium tungstate was more toxic to the snail, with a lethal median concentration of 859 mg of W/kg. While the snail significantly bioaccumulated tungsten, predominately in the hepatopancreas, cabbage leaves bioaccumulated much higher concentrations. Synchrotron-based mapping indicated the highest levels of W were in the veins of cabbage leaves. Our results suggest snails consuming contaminated cabbage accumulated higher tungsten concentrations relative to the concentrations directly bioaccumulated from soil, indicating the importance of robust trophic transfer investigations. Finally, synchrotron mapping provided evidence of tungsten in the inner layer of the snail shell, suggesting potential use of snail shells as a biomonitoring tool for metal contamination.

UV-B irradiation changes specifically the secondary metabolite profile in broccoli sprouts: induced signaling overlaps with defense response to biotic stressors

Only a few environmental factors have such a pronounced effect on plant growth and development as ultraviolet light (UV). Concerns have arisen due to increased UV-B radiation reaching the Earth's surface as a result of stratospheric ozone depletion. Ecologically relevant low to moderate UV-B doses (0.3-1 kJ m(-2) d(-1)) were applied to sprouts of the important vegetable crop Brassica oleracea var. italica (broccoli), and eco-physiological responses such as accumulation of non-volatile secondary metabolites were related to transcriptional responses with Agilent One-Color Gene Expression Microarray analysis using the 2×204 k format Brassica microarray. UV-B radiation effects have usually been linked to increases in phenolic compounds. As expected, the flavonoids kaempferol and quercetin accumulated in broccoli sprouts (the aerial part of the seedlings) 24 h after UV-B treatment. A new finding is the specific UV-B-mediated induction of glucosinolates (GS), especially of 4-methylsulfinylbutyl GS and 4-methoxy-indol-3-ylmethyl GS, while carotenoids and Chl levels remained unaffected. Accumulation of defensive GS metabolites was accompanied by increased expression of genes associated with salicylate and jasmonic acid signaling defense pathways and up-regulation of genes responsive to fungal and bacterial pathogens. Concomitantly, plant pre-exposure to moderate UV-B doses had negative effects on the performance of the caterpillar Pieris brassicae (L.) and on the population growth of the aphid Myzus persicae (Sulzer). Moreover, insect-specific induction of GS in broccoli sprouts was affected by UV-B pre-treatment.

[Transformation and influences of copper and selenium fractions on heavy metals bioavailability in co-contaminated soil]

Pot experiments and laboratory analysis methods were used to investigate the form transformation of additional copper and selenium and their bioavailability for pakchoi (Brassica chinensis) in co-contaminated soil. The results showed that Cu mainly existed in residual bound form, while selenium was present mainly in organic bound and residual form in the uncontaminated soil. In the contaminated soil, copper was mainly bounded to hydrated oxides of iron and manganese, while Se was in exchangeable and carbonate forms. After one month of growing season, Cu tended to transfer into organic bound fractions, while Se tended to bind to hydrated oxides of iron and manganese. The I(R) value of Cu decreased with increasing copper and selenium concentrations, while the I(R) value of Se decreased with increasing Se concentration and had nothing to do with the concentration of exogenous Cu for both before planting and after harvesting of pakchoi. The parameters estimated by S curve fitting indicated that suitable amount of Se (< or = 10 mg x kg(-1)) could promote the Cu uptake by pakchoi, and certain amount of Cu (< or = 400 mg x kg(-1)) could promote Se absorption by pakchoi. Both the I(R), values for Cu and Se had similar trends as the Cu, Se concentrations in pakchoi, which meant that the I(R) value could be used to evaluate the bioavailability of heavy metals in soil. Partial correlation analysis showed that Cu and Se in exchangeable and organic bound forms in soil had better bioavailability for pakchoi. Therefore, the I(R) value of elements in soils and the change of elements before planting and after harvesting of pakchoi can be used as indicators for evaluating the bioavailability of heavy metals.

Rhizonin A from Burkholderia sp. KCTC11096 and its growth promoting role in lettuce seed germination

We isolated and identified a gibberellin-producing Burkholderia sp. KCTC 11096 from agricultural field soils. The culture filtrate of plant growth promoting rhizobacteria (PGPR) significantly increased the germination and growth of lettuce and Chinese cabbage seeds. The ethyl acetate extract of the PGPR culture showed significantly higher rate of lettuce seed germination and growth as compared to the distilled water treated control. The ethyl acetate fraction of the Burkholderia sp. was subjected to bioassay-guided isolation and we obtained for the first time from a Burkholderia sp. the plant growth promoting compound rhizonin A (1), which was characterized through NMR and MS techniques. Application of various concentrations of 1 significantly promoted the lettuce seed germination as compared to control.

Effect of some plant growth regulators on lindane and alpha-endosulfan toxicity to Brassica chinensis

The effect of indolebutyric acid (IBA) and gibberellic acid (GA3), to alleviate the organochlorine phytotoxicity were studied in Brassica chinensis. Presence of organochlorine decreased Brassica chinensis seedlings growth in contaminated alkaline soil. One mg l(-1) IBA could enhance 14 and 26% shoot and root length of B. chinensis seedlings grown at 40 mg kg(-1) lindane contaminated soil, respectively. Ten mg l(-1) IBA also increased 80 and 40% root fresh weight of seedling grown in 40 mg kg(-1) lindane and alpha-endosulfan contaminated soils, respectively. However, IBAhad no effect on shoot and root length of seedlings grown in endosulfan contaminated soil. On the other hand, 10 mg l(-1) GA3 only increased 80% of shoot and root fresh weigh of B. chinensisin 40 mg kg(-1) endosulfan contaminated soil. External auxin addition could increase B. chinensis growth in lindane more than endosulfan contaminated soil. External gibberellin was less effective than external auxin to increase B. chinensis growth in organochlorine contaminated soil. There is possibility that auxin could decrease organochlorine phytotoxicity in plants and hence can be useful for organochlorine phytoremediation.

Rapid production of maggots as feed supplement and organic fertilizer by the two-stage composting of pig manure

A two-stage composting experiment was performed to utilize pig manure for producing maggots as feed supplement and organic fertilizer. Seven-day composting of 1.8 ton fresh manure inoculated with 9 kg mixture of housefly neonates and wheat bran produced 193 kg aging maggots, followed by 12 week composting to maturity. Reaching the thermophilic phase and final maturity faster was characteristic of the maggot-treated compost compared with the same-size natural compost. Upon the transit of the maggot-treated compost to the second stage, the composting temperature maintained around 55 °C for 9 days and the moisture decreased to ~40%. Moreover, higher pH, faster detoxification and different activity patterns for some microbial enzymes were observed. There was a strong material loss (35% water-soluble carbon and 16% total nitrogen) caused by the maggot culture in the first stage. Our results highlight a higher economic value of pig manure achieved through the two-stage composting without bulking agents.

[Methods of bio-engineering destruction of root residues in application to a space vitamin greenhouse with ionite artificial soil]

Regeneration of ionite artificial soil (AS) in root modules (RM) of conveyor-type space greenhouses should be proceeded by removal of root residues without disruption of the AS capillary-porous structure. The proposed method consists of two stages of root residues destruction. On the first stage, AS treatment by 0.7% an alkali water solution with added 0.7% hydrogen peroxide over 3.5 hours in a thermal-insulation container at 95 +/- 4 degrees C reduces root residue mass up to 60%. Specific energy cost of SHF pulses to maintain the required temperature is 1 W x hr for cleaning 1 g and AS sterilization from saprotrophs. On the second stage, AS undergoes saturation with a liquid anaerobic medium for 7-day cultivation of thermophilic Clostridium thermocellum at 55 degrees C. Seven days of bio-engineering regeneration enables removal of 90% root biomass. Residual products of fermentation have a stimulating effect on seed germination and subsequent plant growth. Bio-engineering testing of regenerated AS with cultivation of leaf cabbage Brassica chinensis L. attested to suitability of the technology for extension of AS useful life.

Molecular and functional characterization of broccoli EMBRYONIC FLOWER 2 genes

Polycomb group (PcG) proteins regulate major developmental processes in Arabidopsis. EMBRYONIC FLOWER 2 (EMF2), the VEFS domain-containing PcG gene, regulates diverse genetic pathways and is required for vegetative development and plant survival. Despite widespread EMF2-like sequences in plants, little is known about their function other than in Arabidopsis and rice. To study the role of EMF2 in broccoli (Brassica oleracea var. italica cv. Elegance) development, we identified two broccoli EMF2 (BoEMF2) genes with sequence homology to and a similar gene expression pattern to that in Arabidopsis (AtEMF2). Reducing their expression in broccoli resulted in aberrant phenotypes and gene expression patterns. BoEMF2 regulates genes involved in diverse developmental and stress programs similar to AtEMF2 in Arabidopsis. However, BoEMF2 differs from AtEMF2 in the regulation of flower organ identity, cell proliferation and elongation, and death-related genes, which may explain the distinct phenotypes. The expression of BoEMF2.1 in the Arabidopsis emf2 mutant (Rescued emf2) partially rescued the mutant phenotype and restored the gene expression pattern to that of the wild type. Many EMF2-mediated molecular and developmental functions are conserved in broccoli and Arabidopsis. Furthermore, the restored gene expression pattern in Rescued emf2 provides insights into the molecular basis of PcG-mediated growth and development.

Effects of phosphorus amendments and plant growth on the mobility of Pb, Cu, and Zn in a multi-metal-contaminated soil

PURPOSE

Phosphorus amendments have been widely and successfully used in immobilization of one single metal (e.g., Pb) in contaminated soils. However, application of P amendments in the immobilization of multiple metals and particularly investigations about the effects of planting on the stability of the initially P-induced immobilized metals in the contaminated soils are far limited.

METHODS

This study was conducted to determine the effects of phosphate rock tailing (PR), triple superphosphate fertilizer (TSP), and their combination (P+T) on mobility of Pb, Cu, and Zn in a multimetal-contaminated soil. Chinese cabbage (Brassica rapa subsp. chinensis) (metal-sensitive) and Chinese kale (Brassica alboglabra Bailey) (metal-resistant) were introduced to examine the effects of planting on leaching of Pb, Cu, and Zn in the P-amended soils.

RESULTS

All three P treatments greatly reduced CaCl(2)-extractable Pb and Zn by 55.2-73.1% and 14.3-33.6%, respectively. The PR treatment decreased CaCl(2)-extractable Cu by 27.8%, while the TSP and P+T treatments increased it by 47.2% and 44.4%, respectively. All three P treatments were effective in reducing simulated rainwater leachable Pb, with dissolved and total leachable Pb decrease by 15.6-81.9% and 16.3-64.5%, respectively. The PR treatment reduced the total leachable Zn by 16.8%, while TSP and P+T treatments increased Zn leaching by 92.7% and 78.9%, respectively. However, total Cu leaching were elevated by 17.8-178% in all P treatments. Planting promoted the leaching of Pb and Cu by 98.7-127% and 23.5-170%, respectively, especially in the colloid fraction, whereas the leachable Zn was reduced by 95.3-96.5% due to planting. The P treatments reduced the uptake of Pb, Cu, and Zn in the aboveground parts of Chinese cabbage by up to 65.1%, 34.3%, and 9.59%, respectively. Though P treatments were effective in reducing Zn concentrations in the aboveground parts of the metal-resistant Chinese kale by 22.4-28.9%, they had little effect on Pb and Cu uptake.

CONCLUSIONS

The results indicated that all P treatments were effective in immobilizing Pb. The effect on the immobilization of Cu and Zn varied with the different P treatments and evaluation methods. Metal-sensitive plants are more responsive to the P treatments than metal-resistant plants. Planting affects leaching of metals in the P-amended soils, specially leaching of colloid fraction. The conventional assessment on leaching risks of heavy metals by determining dissolved metals (filtered through 0.45-μm pore size membrane) in leachates could be underestimated since colloid fraction may also contribute to the leaching.

[Effect of volatile metabolites from germinating seeds on the reproduction of the bacteria Listeria monocytogenes and Yersinia pseudotuberculosis]

The biological activity of volatile metabolites of germinating seeds of cabbage (Brassica oleacia), carrot (Daukus carota), salad (Lactuca sativa), and corn (Zea mays L.) against Listeria monocytogenes and Yersinia pseudotuberculosis was studied. It was shown that volatile metabolites are transfer factors and can be the sole carbon and energy source for these bacteria. Methanol is the main substance affecting their growth and reproduction.

Evaluation of iodide and iodate for adsorption-desorption characteristics and bioavailability in three types of soil

Adsorption-desorption of iodine in two forms, viz., iodide (I(-)) and iodate (IO (3) (-) ), in three types of soil were investigated. The soils were: red soil developed on Quaternary red earths (REQ)- clayey, kaolintic thermic plinthite Aquult, Inceptisol soil (IS) and alluvial soil (AS)-Fluvio-marine yellow loamy soil. The isothermal curves of iodine adsorption on soils were described by Langmuir and Freundlich equation, and the maximum adsorption values (y (m)) were obtained from the simple Langmuir model. As compared with the iodide, the iodate was adsorbed in higher amounts by the soils tested. Among three soils, the REQ soil adsorbed more iodine (I(-) and IO (3) (-) ) than the IS and AS. The distribution coefficient (K (d)) of iodine in the soils decreased exponentially with increasing iodine loading concentration. Desorption of iodine in soil was increased correspondingly with increasing adsorption values. The REQ soil had a greater affinity for iodine than the IS and AS at the same iodine loadings. In the pot experiment cultivated with pakchoi (Brassica chinensis L.) and added with two exogenous iodine sources, the iodide form was quickly taken up by pakchoi and caused more toxicity to the vegetable. The rate of iodine loss from soil was higher for iodide form as compared with the iodate. The iodine bioavailability was the highest but the persistence was the weakest in AS among the three soils tested, and the REQ soil showed just the opposite trend to that of the AS soil. This study is of theoretical importance to understand the relationship between iodine adsorption-desorption characteristics and their bioavailability in different soils and it also has practical implications for seeking effective alternatives of iodine biofortification to prevent iodine deficiency disorders.

Individual and joint toxicity effects of Cu, Cr(III), and Cr(VI) on pakchoi: a comparison between solution and soil cultures

The single and joint toxicity effects of Cu, Cr(III), and Cr(VI) on the root elongation of pakchoi in solution and soil were investigated. The median effective concentration (EC(50)) was determined to examine the toxic thresholds of the test elements. The results showed that individual contamination by Cu, Cr(III), or Cr(VI) can inhibit the root elongation of pakchoi. The EC(50) values of the test elements were 2.02 mg/L and 195.8 mg/kg, 62.2 mg/L and 1,773 mg/kg, and 6.88 mg/L and 8.08 mg/kg in solution and soil, respectively. Toxic unit (TU) was introduced to determine the outcome in combined tests, and different behaviors were observed in both solution and soil. The coexistence of Cu and Cr(III) in solution exhibited an antagonistic effect (EC(50mix) = 1.76 TU(mix)), whereas a synergistic effect was observed in soil (EC(50mix) = 0.76 TU(mix)). In contrast, combined Cu-Cr(VI) showed a less than additive toxicity both in solution and soil, with EC(50mix) values of 3.31 and 1.24 TU(mix). In conclusion, the coexistence of toxicity in Cu-Cr(III) and Cu-Cr(VI) differs from the toxicity exhibited individually by Cu, Cr(III), and Cr(VI). Heavy metal interaction also changes depending on the medium.

[Effects of different applied nitrogen forms on pakchoi (Brassica chinensis) growth and its carbon and nitrogen accumulation]

A hydroponic experiment was conducted to study the effects of different applied nitrogen forms, i.e., ammonium, nitrate, glycine, glutamine, alanine, bovine serum albumin (BSA), mixture of glycine and nitrate, and mixture of BSA and nitrate, on the growth and carbon and nitrogen accumulation of pakchoi (Brassica chinensis). The significant differences were observed in the B. chinensis dry mass, fresh mass, carbon and nitrogen accumulation, and soluble protein, soluble sugar, and free amino acid contents among different treatments. In treatment nitrate, the fresh mass and dry mass of B. chinensis shoot and root were the highest; in treatment glycine, the root growth and the carbon and nitrogen accumulation of B. chinensis were promoted obviously; among the treatments glycine, glutamine, and alanine, treatment glutamine was more beneficial to the shoot growth and nitrogen accumulation. The nutritional effect of the applied nitrogen forms was in the order of nitrate, glutamine > mixture of glycine and nitrate, mixture of BSA and nitrate, glycine, ammonium > alanine, BSA, zero nitrogen. It was suggested that organic nitrogen could be used as a source of nitrogen nutrition for B. chinensis growth, and different nitrogen forms could have different physiological effects onthe B. chinensis plants.

Effect of fungicides on plant growth promoting activities of phosphate solubilizing Pseudomonasputida isolated from mustard (Brassica compestris) rhizosphere

This study was navigated to examine the effects of fungicide-stress on the activities of plant-growth-promoting rhizobacterium Pseudomonasputida with inherent phosphate solubilizing activity. The fungicide-tolerant and phosphate solubilizing P.putida strain PS9 was isolated from the mustard rhizosphere and tentatively identified following standard morphological, physiological and biochemical tests. To further consolidate the identity of the strain PS9, the 16S rDNA sequence analysis was performed. Following the BLAST program, the strain PS9 was identified as P.putida. In the presence of the varying concentrations (0-3200 μg mL(-1); at a two fold dilution interval) of four fungicides of different chemical families (tebuconazole, hexaconazole, metalaxyl and kitazin) amended in minimal salt agar medium, the P.putida strain PS9 showed a variable tolerance levels (1400-3200 μg mL(-1)) against the tested fungicides. The strain PS9 produced plant-growth-promoting (PGP) substances in significant amount in the absence of fungicides. In general, fungicides applied at the recommended, two and three times of the recommended rates, decreased the PGP attributes of P.putida the strain PS9 and affected the PGP activities in concentration-dependent manner. Fungicides at the recommended dose had minor reducing effect while the doses higher than the recommended dose significantly reduced the PGP activities (phosphate solubilization, salicylic acid, 2,3-dihydroxy benzoic acid, and indole-3-acetic acid production except exo-polysaccharides, hydrogen cyanate and ammonia production). Of the four fungicides, tebuconazole generally, showed maximum toxicity to the PGP activities of the strain PS9. This study inferred that fungicides must be examined in vitro for their possible adverse effects on soil micro flora before their application in agricultural fields. Moreover, the results also suggested the prerequisite of application of fungicide-tolerant PGPR strains as bioinoculants so that their PGP activities may not be suppressed under fungicide stress.

Effect of different fertilizers on nitrogen isotope composition and nitrate content of Brassica campestris

The effect of different fertilizers on the δ(15)N value, nitrate concentration, and nitrate reductase activity of Brassica campestris and the δ(15)N value of soil has been investigated through a pot experiment. The δ(15)N mean value of B. campestris at the seedling stage observed in the composted chicken treatment (+8.65‰) was higher than that of chemical fertilizer treatment (+5.73‰), compost-chemical fertilizer (+7.53‰), and control check treatment (+7.86‰). There were significantly different δ(15)N values (p < 0.05) between B. campestris cultivated with composted chicken manure treatment and with chemical fertilizer treatment. The similar results were also found at the middle stage and the terminal stage. The variation of δ(15)N value in soil for different treatments was smaller than that of B. campestris, which was +6.71-+8.12‰, +6.83-+8.24‰, and +6.85-8.4‰, respectively, at seedling stage, middle stage, and terminal stage. With the growth of B. campestris, the nitrate content decreased in all treatments, and the nitrate reductase activity in B. campestris increased except for the CK. Results suggested that the δ(15)N values of B. campestris and soil were more effected by the fertilizer than by the dose level, and the δ(15)N value analysis could be used as a tool to discriminate the B. campestris cultivated with composted manure or chemical fertilizer.

Functional alleles of the flowering time regulator FRIGIDA in the Brassica oleracea genome

BACKGROUND

Plants adopt different reproductive strategies as an adaptation to growth in a range of climates. In Arabidopsis thaliana FRIGIDA (FRI) confers a vernalization requirement and thus winter annual habit by increasing the expression of the MADS box transcriptional repressor FLOWERING LOCUS C (FLC). Variation at FRI plays a major role in A. thaliana life history strategy, as independent loss-of-function alleles that result in a rapid-cycling habit in different accessions, appear to have evolved many times. The aim of this study was to identify and characterize orthologues of FRI in Brassica oleracea.

RESULTS

We describe the characterization of FRI from Brassica oleracea and identify the two B. oleracea FRI orthologues (BolC.FRI.a and BolC.FRI.b). These show extensive amino acid conservation in the central and C-terminal regions to FRI from other Brassicaceae, including A. thaliana, but have a diverged N-terminus. The genes map to two of the three regions of B. oleracea chromosomes syntenic to part of A. thaliana chromosome 5 suggesting that one of the FRI copies has been lost since the ancient triplication event that formed the B. oleracea genome. This genomic position is not syntenic with FRI in A. thaliana and comparative analysis revealed a recombination event within the A. thaliana FRI promoter. This relocated A. thaliana FRI to chromosome 4, very close to the nucleolar organizer region, leaving a fragment of FRI in the syntenic location on A. thaliana chromosome 5. Our data show this rearrangement occurred after the divergence from A. lyrata. We explored the allelic variation at BolC.FRI.a within cultivated B. oleracea germplasm and identified two major alleles, which appear equally functional both to each other and A. thaliana FRI, when expressed as fusions in A. thaliana.

CONCLUSIONS

We identify the two Brassica oleracea FRI genes, one of which we show through A. thaliana complementation experiments is functional, and show their genomic location is not syntenic with A. thaliana FRI due to an ancient recombination event. This has complicated previous association analyses of FRI with variation in life history strategy in the Brassica genus.

Permissible value for vanadium in allitic udic ferrisols based on physiological responses of green Chinese cabbage and soil microbes

Greenhouse experiments were conducted to study the permissible value of vanadium (V) based on the growth and physiological responses of green Chinese cabbage (Brassica chinensis L.), and effects of V on microbial biomass carbon (MBC) and enzyme activities in allitic udic ferrisols were also studied. The results showed that biomass of cabbage grown on soil treated with 133 mg V kg(-1) significantly decreased by 25.1% compared with the control (P < 0.05). Vanadium concentrations in leaves and roots increased with increasing soil V concentration. Contents of vitamin C (Vc) increased by 10.3%, while that of soluble sugar in leaves significantly decreased by 54.0% when soil V concentration was 133 mg kg(-1), respectively. The uptake of essential nutrient elements by cabbage was disturbed when soil V concentration exceeded 253 mg kg(-1). Soil MBC was significantly stimulated by 15.5%, while dehydrogenase activity significantly decreased by 62.8% and urease activity slightly changed at treatment of 133 mg V kg(-1) as compared with the control, respectively. Therefore, the permissible value of V in allitic udic ferrisols is proposed as 130 mg kg(-1).

Quality of white cabbage yield and potential risk of ground water nitrogen pollution, as affected by nitrogen fertilisation and irrigation practices

BACKGROUND

The effect of different fertilisation (broadcast solid NPK application and fertigation with water-soluble fertiliser) and irrigation practices (sprinkler and drip irrigation) on yield, the nitrate content in cabbage (Brassica oleracea var. capitata L.) and the cabbage N uptake was detected, in order to assess the potential risk for N losses, by cultivation on sandy-loam soil. The N rate applied on the plots was 200 kg N ha(-1).

RESULTS

The highest yield (93 t ha(-1)) and nitrate content (1256 mg kg(-1) DW) were found with treatments using broadcast fertilisation and sprinkler irrigation. On those plots the negative N balance (-30 kg N ha(-1)) was recorded, which comes mainly from the highest crop N uptake (234 kg N ha(-1)) indicating the lowest potential for N losses.

CONCLUSION

In terms of yield quality and the potential risk for N losses, broadcast fertilisation combined with sprinkler irrigation proved to be the most effective combination among the tested practices under the given experimental conditions. The importance of adequate irrigation is also evident, namely in plots on which 50% drip irrigation was applied, the lowest yield was detected and according to the positive N balance, a higher potential for N losses is expected.

Physiological and biochemical metabolism of germinating broccoli seeds and sprouts

Changes in physiological and biochemical metabolism as well as glucoraphanin and sulforaphane contents of germinating broccoli seeds and sprouts were investigated in this study. Sprout length, root length, and fresh weight increased with germination time. Dry weight varied from 2.5 to 3.0 mg per sprout. A rapid increase in respiratory rate of sprouts occurred between 24 and 36 h of germination and then stayed at a high level. HPLC analysis found that glucoraphanin content increased at the early stage (0-12 h) of germination, decreased to a low value of 3.02 mg/g at 48 h, and then reached the highest value of 6.30 mg/g at 72 h of germination. Sulforaphane content decreased dramatically during the first day of germination, then increased slowly, and reached a high value of 3.38 mg/g at 48 h before declining again.

Agricultural potential of anaerobically digested industrial orange waste with and without aerobic post-treatment

The potential of anaerobically digested orange waste with (AAD) and without (AD) aerobic post-treatment for use in agriculture was evaluated through chemical analyses, short-term phytotoxicity and long-term plant assays. Chemical analyses showed that AD contained ammonia and organic acids, and aerobic post-treatment did not significantly remove these phytotoxins. The N:P2O5:K2O ratio in AD was 1:0.26:0.96 and aerobic post-treatment did not change the composition in AAD except for K2O (1:0.26:1.24). Heavy metal contents in AD and AAD were more or less the same and were below the upper limit recommended for non-sewage sludge application on agricultural soils. Short-term phytotoxicity tests showed that seed germination and root elongation of Chinese cabbage and ryegrass were severely inhibited at digestate concentrations of 60-100%. Germination index values were well below the score of 50% required to indicate the phytotoxic-free nature of compost. Long-term plant assays showed that AD and AAD, when supplemented with a base fertilizer, resulted in higher plant growth, and fresh weight and dry matter production than AD without base fertilizer. The results thus indicate that aerobic post-treatment did not have any significant beneficial effect on reducing phytotoxicity, and AD could be used as such on agricultural soils, especially with high P.

Prediction of flowering time in Brassica oleracea using a quantitative trait loci-based phenology model

Uniformly developing plants with a predictable time to harvest or flowering under unfavourable climate conditions are a major breeding goal in crop species. The main flowering regulators and their response to environmental signals have been identified in Arabidopsis thaliana and homologues of flowering genes have been mapped in many crop species. However, it remains unclear which genes determine within and across genotype flowering time variability in Brassica oleracea and how genetic flowering time regulation is influenced by environmental factors. The goal of this study is model-based prediction of flowering time in a B. oleracea DH-line population using genotype-specific and quantitative trait loci (QTL) model input parameters. A QTL-based phenology model accounting for genotypic differences in temperature responses during vernalisation and non-temperature-sensitive durations from floral transition to flowering was evaluated in two field trials. The model was parameterised using original genotype-specific model input parameters and QTL effects. The genotype-specific model parameterisation showed accurate predictability of flowering time if floral induction was promoted by low temperature (R(2) = 0.81); unfavourably high temperatures reduced predictability (R(2) = 0.65). Replacing original model input parameters by QTL effects reduced the capability of the model to describe across-genotype variability (R(2) = 0.59 and 0.50). Flowering time was highly correlated with a model parameter accounting for vernalisation effects. Within-genotype variability was significantly correlated with the same parameter if temperature during the inductive phase was high. We conclude that flowering time variability across genotypes was largely due to differences in vernalisation response, although it has been shown elsewhere that the candidate FLOWERING LOCUS C (FLC) did not co-segregate with flowering time in the same population. FLC independent vernalisation pathways have been described for several species, but not yet for B. oleracea.

Effect of hexavalent chromium on the growth and physiological and biochemical parameters on Brassica oleracea L. var. acephala DC

In order to determine the toxic effect of chromium Cr(VI) on the seed germination, the root and shoot length, the root-cotyledonary leaves, the fresh and dry weight in eight-day-old seedlings Brassica oleracea L. var. acephala DC (kale) were treated with various concentrations of Cr in the growth medium. The accumulation of chromium in the tissues was determined in the cotyledons and the roots of the kale seedlings. High rate of Cr uptake was observed in the roots. But the organs could not accumulate large amount Cr. The effect of Cr on B. oleracea var. acephala was evaluated by changes in chlorophyll a, b, lipid peroxidation, proline, ascorbate, protein carbonyl groups, non-protein thiols and peroxidase activity. There were significant decreases in chlorophylls a, b content of the plants treated with Cr. Chromium treated kale seedlings had higher lipid peroxidation and the protein carbonyl groups in cotyledonary leaves than the roots. The changes refer to toxic effects of Cr. There were increases in the non-protein thiol, the total ascorbate, and proline content in the cotyledons and the roots of the seedlings grown on the media containing 0.1 and 0.15 mM Cr. The guaiacol peroxidase activity was higher in the roots of the seedlings than their cotyledons.