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Kim JS, Chae S, Do Kim K, Song SI, Park SH, Choi SB, Jun KM, Shim SH, Jeon JS, Lee GS, Kim YK. OsMYB14, an R2R3-MYB Transcription Factor, Regulates Plant Height through the Control of Hormone Metabolism in Rice. Mol Cells 2024:100093. [PMID: 39004308 DOI: 10.1016/j.mocell.2024.100093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2024] [Revised: 06/26/2024] [Accepted: 07/09/2024] [Indexed: 07/16/2024] Open
Abstract
Plant growth must be regulated throughout the plant life cycle. The MYB TF family is one of the largest TF families and is involved in metabolism, lignin biosynthesis and developmental processes. Here, we showed that OsMYB14, a rice R2R3-MYB TF, was expressed in leaves and roots, especially in rice culm and panicles, and that it localized to the nucleus. Overexpression of OsMYB14 (OsMYB14-ox) in rice resulted in a 30% reduction in plant height compared to that of the wild type (WT), while the height of the osmyb14-ko mutant generated using the CRISPR/Cas9 system was not significantly different. Microscopic observations of the first internode revealed that the cell size did not differ significantly among the lines. RNA-seq analysis revealed that genes associated with plant development, regulation, lipid metabolism, carbohydrate metabolism, and gibberellin and auxin metabolic processes were downregulated in the OsMYB14-ox line. Hormone quantitation revealed that inactive GA19 accumulated in OsMYB14-ox but not in the WT or knockout plants, suggesting that GA20 generation was repressed. IAA and IAA-Asp accumulated in OsMYB14-ox and osmyb14-ko, respectively. Indeed, real-time PCR analysis revealed that the expression of OsGA20ox1, encoding Gibberellin20 oxidase 1, and OsGH3-2, encoding IAA-amido synthetase, was downregulated in OsMYB14-ox and upregulated in osmyb14-ko. A protein binding microarray (PBM) revealed the presence of a consensus DNA-binding sequence, the ACCTACC-like motif, in the promoters of the OsGA20ox1 and GA20ox2 genes. These results suggest that OsMYB14 may act as a negative regulator of biological processes affecting plant height in rice by regulating GA biosynthesis and auxin metabolism.
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Affiliation(s)
- Joung Sug Kim
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Songhwa Chae
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Kyung Do Kim
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Sang-Ik Song
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Su Hyun Park
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Sang-Bong Choi
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Kyong Mi Jun
- Genomics Genetics Institute, GreenGene Biotech Inc., Yongin, Gyeonggi-do 17058, Republic of Korea
| | - Su-Hyeon Shim
- Graduate School of Green-Bio Science and Crop Biotech Institute, Kyung Hee University, Yongin, Gyeonggi-do 17104, Republic of Korea
| | - Jong-Seong Jeon
- Graduate School of Green-Bio Science and Crop Biotech Institute, Kyung Hee University, Yongin, Gyeonggi-do 17104, Republic of Korea
| | - Gang-Seob Lee
- Department of Agricultural Biotechnology, National Institute of Agricultural Sciences, Jeonju, Jeollabuk-do, 54875, Republic of Korea
| | - Yeon-Ki Kim
- Department of Biosciences and Bioinformatics, Myongji University, Yongin, Gyeonggi-do 17058, Republic of Korea.
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Sanchez Barrios A, Lundberg D, de Lorenzo L, Amos BK, Nair M, Hunt A, DeBolt S. Bacterial Spermosphere Inoculants Alter N. benthamiana-Plant Physiology and Host Bacterial Microbiome. PLANTS (BASEL, SWITZERLAND) 2024; 13:1677. [PMID: 38931109 PMCID: PMC11207711 DOI: 10.3390/plants13121677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Revised: 05/15/2024] [Accepted: 06/12/2024] [Indexed: 06/28/2024]
Abstract
In this study, we investigated the interplay between the spermosphere inoculum, host plant physiology, and endophytic compartment (EC) microbial community. Using 16S ribosomal RNA gene sequencing of root, stem, and leaf endophytic compartment communities, we established a baseline microbiome for Nicotiana sp. Phenotypic differences were observed due to the addition of some bacterial inoculants, correlated with endogenous auxin loads using transgenic plants expressing the auxin reporter pB-GFP::P87. When applied as spermosphere inoculants, select bacteria were found to create reproducible variation within the root EC microbiome and, more systematically, the host plant physiology. Our findings support the assertion that the spermosphere of plants is a zone that can influence the EC microbiome when applied in a greenhouse setting.
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Affiliation(s)
| | - Derek Lundberg
- Department of Molecular Biology, Max Planck Institute for Developmental Biology, 72076 Tübingen, Germany;
| | - Laura de Lorenzo
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546, USA
| | - B Kirtley Amos
- Department of Horticulture, University of Kentucky, Lexington, KY 40546, USA; (A.S.B.)
| | - Meera Nair
- Department of Horticulture, University of Kentucky, Lexington, KY 40546, USA; (A.S.B.)
| | - Arthur Hunt
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546, USA
| | - Seth DeBolt
- Department of Horticulture, University of Kentucky, Lexington, KY 40546, USA; (A.S.B.)
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Jayasinghege CPA, Ozga JA, Manolii VP, Hwang SF, Strelkov SE. Impact of Susceptibility on Plant Hormonal Composition during Clubroot Disease Development in Canola ( Brassica napus). PLANTS (BASEL, SWITZERLAND) 2023; 12:2899. [PMID: 37631111 PMCID: PMC10459861 DOI: 10.3390/plants12162899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/02/2023] [Accepted: 08/04/2023] [Indexed: 08/27/2023]
Abstract
Clubroot, caused by Plasmodiophora brassicae, is a soilborne disease of crucifers associated with the formation of large root galls. This root enlargement suggests modulation of plant hormonal networks by the pathogen, stimulating cell division and elongation and influencing host defense. We studied physiological changes in two Brassica napus cultivars, including plant hormone profiles-salicylic acid (SA), jasmonic acid (JA), abscisic acid (ABA), the auxin indole-3-acetic acid (IAA), and the ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC)-along with their selected derivatives following inoculation with virulent and avirulent P. brassicae pathotypes. In susceptible plants, water uptake declined from the initial appearance of root galls by 21 days after inoculation, but did not have a significant effect on photosynthetic rate, stomatal conductance, or leaf chlorophyll levels. Nonetheless, a strong increase in ABA levels indicated that hormonal mechanisms were triggered to cope with water stress due to the declining water uptake. The free SA level in the roots increased strongly in resistant interactions, compared with a relatively minor increase during susceptible interactions. The ratio of conjugated SA to free SA was higher in susceptible interactions, indicating that resistant interactions are linked to the plant's ability to maintain higher levels of bioactive free SA. In contrast, JA and its biologically active form JA-Ile declined up to 7-fold in susceptible interactions, while they were maintained during resistant interactions. The ACC level increased in the roots of inoculated plants by 21 days, irrespective of clubroot susceptibility, indicating a role of ethylene in response to pathogen interactions that is independent of disease severity. IAA levels at early and later infection stages were lower only in susceptible plants, suggesting a modulation of auxin homeostasis by the pathogen relative to the host defense system.
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Affiliation(s)
| | - Jocelyn A. Ozga
- Plant BioSystems, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G 2P5, Canada; (C.P.A.J.); (V.P.M.); (S.-F.H.)
| | | | | | - Stephen E. Strelkov
- Plant BioSystems, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G 2P5, Canada; (C.P.A.J.); (V.P.M.); (S.-F.H.)
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Subramanian S, Mitkus E, Souleimanov A, Smith DL. Lipo-chitooligosaccharide and thuricin 17 act as plant growth promoters and alleviate drought stress in Arabidopsis thaliana. Front Microbiol 2023; 14:1184158. [PMID: 37601342 PMCID: PMC10436337 DOI: 10.3389/fmicb.2023.1184158] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2023] [Accepted: 07/10/2023] [Indexed: 08/22/2023] Open
Abstract
Lipo-chito-oligosaccharide (LCO-from Bradyrhizobium japonicum) and thuricin 17 (Th17-from Bacillus thuringiensis) are bacterial signal compounds from the rhizosphere of soybean that have been shown to enhance plant growth in a range of legumes and non-legumes. In this study, an attempt to quantify phytohormones involved in the initial hours after exposure of Arabidopsis thaliana to these compounds was conducted using UPLC-ESI-MS/MS. A petri-plate assay was conducted to screen for drought stress tolerance to PEG 8000 infusion and plant growth was studied 21-days post-stress. Arabidopsis thaliana plants grown in trays with drought stress imposed by water withhold were used for free proline determination, elemental analysis, and untargeted proteomics using LC-MS/MS studies. At 24 h post-exposure to the signal compounds under optimal growth conditions, Arabidopsis thaliana rosettes varied in their responses to the two signals. While LCO-treated rosettes showed a decrease in total IAA, cytokinins, gibberellins, and jasmonic acid, increases in ABA and SA was very clear. Th17-treated rosettes, on the other hand, showed an increase in IAA and SA. Both treatments resulted in decreased JA levels. Under severe drought stress imposed by PEG 8000 infusion, LCO and Th17 treatments were found to significantly increase fresh and dry weight over drought-stressed control plates, indicating that the presence of the signaling compounds decreased the negative effects experienced by the plants. Free proline content increased in LCO- and Th17-treated plants after water-withhold drought stress. Elemental analysis showed a significant increase in carbon percentage at the lower concentration of Th17. Untargeted proteomics revealed changes in the levels of drought-specific ribosomal proteins, glutathione S-transferase, late embryogenesis proteins, vegetative storage proteins 1 and 2, thaumatin-like proteins, and those related to chloroplast and carbon metabolism. The roles of some of these significantly affected proteins detected under drought stress are discussed.
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Affiliation(s)
| | - Erika Mitkus
- Department of Biology, McGill University, Montreal, QC, Canada
| | - Alfred Souleimanov
- Department of Plant Sciences, MacDonald Campus, McGill University, Montreal, QC, Canada
| | - Donald L. Smith
- Department of Plant Sciences, MacDonald Campus, McGill University, Montreal, QC, Canada
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Galeano E, Thomas BR. Unraveling genetic variation among white spruce families generated through different breeding strategies: Heritability, growth, physiology, hormones and gene expression. FRONTIERS IN PLANT SCIENCE 2023; 14:1052425. [PMID: 37077625 PMCID: PMC10106773 DOI: 10.3389/fpls.2023.1052425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Accepted: 03/15/2023] [Indexed: 05/03/2023]
Abstract
Tree improvement programs select genotypes for faster growth, at both early and late stages, to increase yields over unimproved material, and the improvement is frequently attributed to genetic control in growth parameters among genotypes. Underutilized genetic variability among genotypes also has the potential to ensure future gains are possible. However, the genetic variation in growth, physiology and hormone control among genotypes generated from different breeding strategies has not been well characterized in conifers. We assessed growth, biomass, gas exchange, gene expression and hormone levels in white spruce seedlings obtained from three different breeding strategies (controlled crosses, polymix pollination, open pollination) using parents grafted into a clonal seed orchard in Alberta, Canada. A pedigree-based best linear unbiased prediction (ABLUP) mixed model was implemented to quantify variability and narrow-sense heritability for target traits. The levels of several hormones and expression of gibberellin-related genes in apical internodes were also determined. Over the first two years of development, the estimated heritabilities for height, volume, total dry biomass, above ground dry biomass, root:shoot ratio and root length, varied between 0.10 and 0.21, with height having the highest value. The ABLUP values showed large genetic variability in growth and physiology traits both between families from different breeding strategies, and within families. The principal component analysis showed that developmental and hormonal traits explained 44.2% and 29.4% of the total phenotypic variation between the three different breeding strategies and two growth groups. In general, controlled crosses from the fast growth group showed the best apical growth, with more accumulation of indole-3-acetic acid, abscisic acid, phaseic acid, and a 4-fold greater gene expression of PgGA3ox1 in genotypes from controlled crosses versus those from open pollination. However, in some cases, open pollination from the fast and slow growth groups showed the best root development, higher water use efficiency (iWUE and δ13C) and more accumulation of zeatin and isopentenyladenosine. In conclusion, tree domestication can lead to trade-offs between growth, carbon allocation, photosynthesis, hormone levels and gene expression, and we encourage the use of this phenotypic variation identified in improved and unimproved trees to advance white spruce tree improvement programs.
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Affiliation(s)
- Esteban Galeano
- Department of Forestry, Mississippi State University, Starkville, MS, United States
- Department of Renewable Resources, University of Alberta, Edmonton, AB, Canada
- *Correspondence: Esteban Galeano,
| | - Barb R. Thomas
- Department of Renewable Resources, University of Alberta, Edmonton, AB, Canada
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Youssef MS, Renault S, Hill RD, Stasolla C. The soybean Phytoglobin1 (GmPgb1) is involved in water deficit responses through changes in ABA metabolism. JOURNAL OF PLANT PHYSIOLOGY 2021; 267:153538. [PMID: 34649097 DOI: 10.1016/j.jplph.2021.153538] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 09/18/2021] [Accepted: 09/26/2021] [Indexed: 06/13/2023]
Abstract
Soybean (Glycine max), a major grain crop worldwide, is susceptible to severe yield loss due to drought. Soybean plants over-expressing and downregulating the soybean Phytoblobin1 (GmPgb1) were evaluated for their ability to cope with polyethylene glycol (PEG)-induced water deficit. Sense transformation of GmPgb1, which was more expressed in shoot tissue relative to roots, increased overall plant performance and tolerance to water stress by attenuating the PEG depression of photosynthetic gas exchange parameters and chlorophyll content, as well as reducing leaf injury and promoting root growth. The higher plant relative water content, as a result of GmPgb1 over-expression, was associated with higher transcript levels of three aquaporins: GmTIP1;5 and GmTIP2;5 GmPIP2;9, known to confer water stress tolerance. Opposite results were observed in plants suppressing GmPgb1, which were highly susceptible to PEG-induced stress. Transcriptional and metabolic analyses revealed higher ABA synthesis in dehydrating leaves of plants over-expressing GmPgb1 relative to those suppressing the same gene. The latter plants exhibited a transcriptional induction of ABA catabolic enzymes and higher accumulation of the ABA catabolite dehydrophaseic acid (DPA). Administration of 8'-acetylene ABA, an ABA agonist resistant to the ABA catabolic activity, was sufficient to restore tolerance in the GmPgb1 down-regulating plants suggesting that regulation of ABA catabolism is as important as ABA synthesis in conferring PEG-induced water stress tolerance. Screening of natural soybean germplasm also revealed a rapid and transient increase in foliar GmPgb1 in tolerant plants relative to their susceptible counterparts, thus confirming the key role exercised by this gene during water stress.
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Affiliation(s)
- Mohamed S Youssef
- Second affiliation: Botany and Microbiology Department, Faculty of Science, Kafrelsheikh University, Kafrelsheikh, 33516, Egypt; Dept of Plant Science, University of Manitoba, Winnipeg, R3T2N2, MB, Canada
| | - Sylvie Renault
- Department of Biological Sciences, University of Manitoba, Winnipeg, R3T5Z9, MB, Canada
| | - Robert D Hill
- Dept of Plant Science, University of Manitoba, Winnipeg, R3T2N2, MB, Canada
| | - Claudio Stasolla
- Dept of Plant Science, University of Manitoba, Winnipeg, R3T2N2, MB, Canada.
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7
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Buhrow LM, Liu Z, Cram D, Sharma T, Foroud NA, Pan Y, Loewen MC. Wheat transcriptome profiling reveals abscisic and gibberellic acid treatments regulate early-stage phytohormone defense signaling, cell wall fortification, and metabolic switches following Fusarium graminearum-challenge. BMC Genomics 2021; 22:798. [PMID: 34742254 PMCID: PMC8571860 DOI: 10.1186/s12864-021-08069-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Accepted: 10/10/2021] [Indexed: 01/21/2023] Open
Abstract
Background Treatment of wheat with the phytohormones abscisic acid (ABA) and gibberellic acid (GA) has been shown to affect Fusarium head blight (FHB) disease severity. However, the molecular mechanisms underlying the elicited phenotypes remain unclear. Toward addressing this gap in our knowledge, global transcriptomic profiling was applied to the FHB-susceptible wheat cultivar ‘Fielder’ to map the regulatory responses effected upon treatment with ABA, an ABA receptor antagonist (AS6), or GA in the presence or absence of Fusarium graminearum (Fg) challenge. Results Spike treatments resulted in a total of 30,876 differentially expressed genes (DEGs) identified in ‘Fielder’ (26,004) and the Fg (4872) pathogen. Topology overlap and correlation analyses defined 9689 wheat DEGs as Fg-related across the treatments. Further enrichment analyses demonstrated that these included expression changes within ‘Fielder’ defense responses, cell structural metabolism, molecular transport, and membrane/lipid metabolism. Dysregulation of ABA and GA crosstalk arising from repression of ‘Fielder’ FUS3 was noted. As well, expression of a putative Fg ABA-biosynthetic cytochrome P450 was detected. The co-applied condition of Fg + ABA elicited further up-regulation of phytohormone biosynthesis, as well as SA and ET signaling pathways and cell wall/polyphenolic metabolism. In contrast, co-applied Fg + GA mainly suppressed phytohormone biosynthesis and signaling, while modulating primary and secondary metabolism and flowering. Unexpectedly, co-applied Fg + AS6 did not affect ABA biosynthesis or signaling, but rather elicited antagonistic responses tied to stress, phytohormone transport, and FHB disease-related genes. Conclusions Observed exacerbation (misregulation) of classical defense mechanisms and cell wall fortifications upon ABA treatment are consistent with its ability to promote FHB severity and its proposed role as a fungal effector. In contrast, GA was found to modulate primary and secondary metabolism, suggesting a general metabolic shift underlying its reduction in FHB severity. While AS6 did not antagonize traditional ABA pathways, its impact on host defense and Fg responses imply potential for future investigation. Overall, by comparing these findings to those previously reported for four additional plant genotypes, an additive model of the wheat-Fg interaction is proposed in the context of phytohormone responses. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-021-08069-0.
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Affiliation(s)
- Leann M Buhrow
- National Research Council of Canada, Aquatic and Crop Resources Development Research Centre, 110 Gymnasium Place, Saskatoon, SK, S7N 0M8, Canada
| | - Ziying Liu
- National Research Council of Canada, Digital Technologies Research Centre, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Dustin Cram
- National Research Council of Canada, Aquatic and Crop Resources Development Research Centre, 110 Gymnasium Place, Saskatoon, SK, S7N 0M8, Canada
| | - Tanya Sharma
- University of Ottawa, Department of Chemistry and Biomolecular Sciences, 150 Louis-Pasteur Pvt, Ottawa, ON, K1N 6N5, Canada
| | - Nora A Foroud
- Agriculture and Agri-food Canada, Lethbridge Research and Development Centre, 5403 1st Ave, Lethbridge, AB, T1J 4B1, Canada
| | - Youlian Pan
- National Research Council of Canada, Digital Technologies Research Centre, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada.
| | - Michele C Loewen
- National Research Council of Canada, Aquatic and Crop Resources Development Research Centre, 110 Gymnasium Place, Saskatoon, SK, S7N 0M8, Canada. .,University of Ottawa, Department of Chemistry and Biomolecular Sciences, 150 Louis-Pasteur Pvt, Ottawa, ON, K1N 6N5, Canada. .,National Research Council of Canada, Aquatic and Crop Resources Development Research Centre, 100 Sussex Drive, Ottawa, ON, K1A 0R6, Canada.
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Mares DJ, Mrva K, Cheong J, Fox R, Mather DE. Dormancy and dormancy release in white-grained wheat (Triticum aestivum L.). PLANTA 2021; 253:5. [PMID: 33387045 DOI: 10.1007/s00425-020-03518-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Accepted: 12/02/2020] [Indexed: 06/12/2023]
Abstract
Dormancy in white-grained wheat is conditioned by the cumulative effects of several QTL that delay the onset of the capacity to germinate during ripening and after-ripening. Grain dormancy at harvest-ripeness is a major component of resistance to preharvest sprouting in wheat (Triticum aestivum L.) and an important trait in regions where rain is common during the harvest period. Breeding lines developed in Australia maintained their dormancy phenotype over multiple seasons and during grain ripening, the time between anthesis and the acquisition of the capacity to germinate, dormancy release, increased in line with the strength of dormancy. Genetic dissection of two dormant lines indicated that dormancy was due to the cumulative action of between one and three major genetic loci and several minor loci. This presents a significant challenge for breeders targeting environments with a high risk of sprouting where strong dormancy is desirable. Only around half of the difference in dormancy between the dormant lines and a non-dormant variety could be attributed to the major genetic loci on chromosomes 4A and 3A. A QTL that was mapped on chromosome 5A may be an orthologue of a minor QTL for dormancy in barley. At each locus, the dormancy allele increased the time to dormancy release during ripening. In combination, these alleles had cumulative effects. Embryo sensitivity to abscisic acid was related to the dormancy phenotype of the whole caryopsis, however, changes in concentrations of abscisic acid and gibberellins in embryo sections and de-embryonated grains during ripening and after-ripening could not be linked to the timing of dormancy release.
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Affiliation(s)
- Daryl J Mares
- School of Agriculture Food and Wine, The University of Adelaide, Waite Campus, Urrbrae, Glen Osmond, SA, 5064, Australia.
| | - Kolumbina Mrva
- School of Agriculture Food and Wine, The University of Adelaide, Waite Campus, Urrbrae, Glen Osmond, SA, 5064, Australia
| | - Judy Cheong
- SARDI, Waite Precinct, Urrbrae, SA, Australia
| | - Rebecca Fox
- School of Agriculture Food and Wine, The University of Adelaide, Waite Campus, Urrbrae, Glen Osmond, SA, 5064, Australia
| | - Diane E Mather
- School of Agriculture Food and Wine, The University of Adelaide, Waite Campus, Urrbrae, Glen Osmond, SA, 5064, Australia
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Boter M, Calleja-Cabrera J, Carrera-Castaño G, Wagner G, Hatzig SV, Snowdon RJ, Legoahec L, Bianchetti G, Bouchereau A, Nesi N, Pernas M, Oñate-Sánchez L. An Integrative Approach to Analyze Seed Germination in Brassica napus. FRONTIERS IN PLANT SCIENCE 2019; 10:1342. [PMID: 31708951 PMCID: PMC6824160 DOI: 10.3389/fpls.2019.01342] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Accepted: 09/26/2019] [Indexed: 05/23/2023]
Abstract
Seed germination is a complex trait determined by the interaction of hormonal, metabolic, genetic, and environmental components. Variability of this trait in crops has a big impact on seedling establishment and yield in the field. Classical studies of this trait in crops have focused mainly on the analyses of one level of regulation in the cascade of events leading to seed germination. We have carried out an integrative and extensive approach to deepen our understanding of seed germination in Brassica napus by generating transcriptomic, metabolic, and hormonal data at different stages upon seed imbibition. Deep phenotyping of different seed germination-associated traits in six winter-type B. napus accessions has revealed that seed germination kinetics, in particular seed germination speed, are major contributors to the variability of this trait. Metabolic profiling of these accessions has allowed us to describe a common pattern of metabolic change and to identify the levels of malate and aspartate metabolites as putative metabolic markers to estimate germination performance. Additionally, analysis of seed content of different hormones suggests that hormonal balance between ABA, GA, and IAA at crucial time points during this process might underlie seed germination differences in these accessions. In this study, we have also defined the major transcriptome changes accompanying the germination process in B. napus. Furthermore, we have observed that earlier activation of key germination regulatory genes seems to generate the differences in germination speed observed between accessions in B. napus. Finally, we have found that protein-protein interactions between some of these key regulator are conserved in B. napus, suggesting a shared regulatory network with other plant species. Altogether, our results provide a comprehensive and detailed picture of seed germination dynamics in oilseed rape. This new framework will be extremely valuable not only to evaluate germination performance of B. napus accessions but also to identify key targets for crop improvement in this important process.
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Affiliation(s)
- Marta Boter
- Centro de Biotecnología y Genómica de Plantas, (Universidad Politécnica de Madrid –Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria), Madrid, Spain
| | - Julián Calleja-Cabrera
- Centro de Biotecnología y Genómica de Plantas, (Universidad Politécnica de Madrid –Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria), Madrid, Spain
| | - Gerardo Carrera-Castaño
- Centro de Biotecnología y Genómica de Plantas, (Universidad Politécnica de Madrid –Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria), Madrid, Spain
| | - Geoffrey Wagner
- Department of Plant Breeding, Justus Liebig University Giessen, Giessen, Germany
| | - Sarah Vanessa Hatzig
- Department of Plant Breeding, Justus Liebig University Giessen, Giessen, Germany
| | - Rod J. Snowdon
- Department of Plant Breeding, Justus Liebig University Giessen, Giessen, Germany
| | - Laurie Legoahec
- Joint Laboratory for Genetics, Institute for Genetics, Environment and Plant Protection (IGEPP), Le Rheu, France
| | - Grégoire Bianchetti
- Joint Laboratory for Genetics, Institute for Genetics, Environment and Plant Protection (IGEPP), Le Rheu, France
| | - Alain Bouchereau
- Joint Laboratory for Genetics, Institute for Genetics, Environment and Plant Protection (IGEPP), Le Rheu, France
| | - Nathalie Nesi
- Joint Laboratory for Genetics, Institute for Genetics, Environment and Plant Protection (IGEPP), Le Rheu, France
| | - Mónica Pernas
- Centro de Biotecnología y Genómica de Plantas, (Universidad Politécnica de Madrid –Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria), Madrid, Spain
| | - Luis Oñate-Sánchez
- Centro de Biotecnología y Genómica de Plantas, (Universidad Politécnica de Madrid –Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria), Madrid, Spain
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Liu Y, Li J, Li D, Li XM, Li D, Zhou G, Xu KP, Kang FH, Zou ZX, Xu PS, Tan GS. Anti-cholinesterase activities of constituents isolated from Lycopodiastrum casuarinoides. Fitoterapia 2019; 139:104366. [PMID: 31629868 DOI: 10.1016/j.fitote.2019.104366] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2019] [Revised: 09/26/2019] [Accepted: 09/28/2019] [Indexed: 11/19/2022]
Abstract
Phytochemical investigation of the ethyl acetate extract of Lycopodiastrum casuarinoides (Spring) Holub (Lycopodiaceae) led to the isolation of nine compounds, including two new serratene triterpenoids, serrat-14-en-3α,21α-diol (1), 26-nor-8-oxo-21-one-α-onocerin (6), one new abietane diterpenoid, lycocasuarinone A (7), one new sesquiterpene acid, 7, 9-diene-1,4-epoxy-2-hydroxy-10-carboxylic acid (8) and one new chromone derivative, 5,7-dihydroxy-2-methyl esterchromone (9), together with four known serratene triterpenoids (2-5). Abietane diterpenoid (7) and sesquiterpene acid (8) from Lycopodiastrum casuarinoides are reported for the first time. Their structures and stereochemistry were unambiguously elucidated by spectroscopic analysis and comparison with known ones. All the compounds were tested for acetylcholinesterase (AChE) and butyrocholinesterase (BuChE) inhibitory activities. Bioactivity assays revealed that compound 6 exhibited the most potent AChE inhibitory effect.
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Affiliation(s)
- Yang Liu
- Xiangya Hospital of Central South University, Changsha 410008, PR China
| | - Jing Li
- Xiangya Hospital of Central South University, Changsha 410008, PR China
| | - Dan Li
- Xiangya Hospital of Central South University, Changsha 410008, PR China
| | - Xiao-Min Li
- Xiangya Hospital of Central South University, Changsha 410008, PR China
| | - Dai Li
- Xiangya Hospital of Central South University, Changsha 410008, PR China
| | - Gan Zhou
- Xiangya Hospital of Central South University, Changsha 410008, PR China
| | - Kang-Ping Xu
- Xiangya School of Pharmaceutical Sciences, Central South University, Changsha 410013, PR China
| | - Feng-Hua Kang
- Xiangya School of Pharmaceutical Sciences, Central South University, Changsha 410013, PR China
| | - Zhen-Xing Zou
- Xiangya School of Pharmaceutical Sciences, Central South University, Changsha 410013, PR China
| | - Ping-Sheng Xu
- Xiangya Hospital of Central South University, Changsha 410008, PR China.
| | - Gui-Shan Tan
- Xiangya Hospital of Central South University, Changsha 410008, PR China; Xiangya School of Pharmaceutical Sciences, Central South University, Changsha 410013, PR China.
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11
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Doğramaci M, Anderson JV, Chao WS, Horvath DP, Hernandez AG, Mikel MA, Foley ME. Foliar Glyphosate Treatment Alters Transcript and Hormone Profiles in Crown Buds of Leafy Spurge and Induces Dwarfed and Bushy Phenotypes throughout its Perennial Lifecycle. THE PLANT GENOME 2017; 10. [PMID: 29293817 DOI: 10.3835/plantgenome2016.09.0098] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Accepted: 04/25/2017] [Indexed: 06/07/2023]
Abstract
Leafy spurge ( L.) is an invasive weed of North America and its perennial nature attributed to underground adventitious buds (UABs) that undergo seasonal cycles of para-, endo-, and ecodormancy. Recommended rates of glyphosate (∼1 kg ha) destroy aboveground shoots but plants still regenerate vegetatively; therefore, it is considered glyphosate-tolerant. However, foliar application of glyphosate at higher rates (2.2-6.7 kg ha) causes sublethal effects that induce UABs to produce stunted, bushy phenotypes. We investigated the effects of glyphosate treatment (±2.24 kg ha) on vegetative growth, phytohormone, and transcript profiles in UABs under controlled environments during one simulated seasonal cycle. Because shoots derived from UABs of foliar glyphosate-treated plants produced stunted, bushy phenotypes, we could not directly determine if these UABs transitioned through seasonally induced endo- and ecodormancy. However, transcript abundance for leafy spurge dormancy marker genes and principal component analyses suggested that UABs of foliar glyphosate-treated plants transitioned through endo- and ecodormancy. Glyphosate treatment increased shikimate abundance in UABs 7 d after treatment; however, the abundance of shikimate gradually decreased as UABs transitioned through endo- and ecodormancy. The dissipation of shikimate over time suggests that glyphosate's target site was no longer affected, but these changes did not reverse the altered phenotypes observed from UABs of foliar glyphosate-treated leafy spurge. Transcript profiles further indicated that foliar glyphosate treatment significantly affected phytohormone biosynthesis and signaling, particularly auxin transport; gibberellic acid, abscisic acid and jasmonic acid biosynthesis; ethylene responses; and detoxification and cell cycle processes in UABs. These results correlated well with the available phytohormone profiles and altered phenotypes.
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12
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Comparative transcriptome analysis between an evolved abscisic acid-overproducing mutant Botrytis cinerea TBC-A and its ancestral strain Botrytis cinerea TBC-6. Sci Rep 2016; 6:37487. [PMID: 27892476 PMCID: PMC5124961 DOI: 10.1038/srep37487] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2016] [Accepted: 10/31/2016] [Indexed: 12/21/2022] Open
Abstract
Abscisic acid (ABA) is a classical phytohormone which plays an important role in plant stress resistance. Moreover, ABA is also found to regulate the activation of innate immune cells and glucose homeostasis in mammals. Therefore, this ‘stress hormone’ is of great importance to theoretical research and agricultural and medical applications. Botrytis cinerea is a well-known phytopathogenic ascomycete that synthesizes ABA via a pathway substantially different from higher plants. Identification of the functional genes involved in ABA biosynthesis in B. cinerea would be of special interest. We developed an ABA-overproducing mutant strain, B. cinerea TBC-A, previously and obtained a 41.5-Mb genome sequence of B. cinerea TBC-A. In this study, the transcriptomes of B. cinerea TBC-A and its ancestral strain TBC-6 were sequenced under identical fermentation conditions. A stringent comparative transcriptome analysis was performed to identify differentially expressed genes participating in the metabolic pathways related to ABA biosynthesis in B. cinerea. This study provides the first global view of the transcriptional changes underlying the very different ABA productivity of the B. cinerea strains and will expand our knowledge of the molecular basis for ABA biosynthesis in B. cinerea.
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13
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Buhrow LM, Cram D, Tulpan D, Foroud NA, Loewen MC. Exogenous Abscisic Acid and Gibberellic Acid Elicit Opposing Effects on Fusarium graminearum Infection in Wheat. PHYTOPATHOLOGY 2016; 106:986-96. [PMID: 27135677 DOI: 10.1094/phyto-01-16-0033-r] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Although the roles of salicylate (SA) and jasmonic acid (JA) have been well-characterized in Fusarium head blight (FHB)-infected cereals, the roles of other phytohormones remain more ambiguous. Here, the association between an array of phytohormones and FHB pathogenesis in wheat is investigated. Comprehensive profiling of endogenous hormones demonstrated altered cytokinin, gibberellic acid (GA), and JA metabolism in a FHB-resistant cultivar, whereas challenge by Fusarium graminearum increased abscisic acid (ABA), JA, and SA in both FHB-susceptible and -resistant cultivars. Subsequent investigation of ABA or GA coapplication with fungal challenge increased and decreased FHB spread, respectively. These phytohormones-induced effects may be attributed to alteration of the F. graminearum transcriptome because ABA promoted expression of early-infection genes, including hydrolases and cytoskeletal reorganization genes, while GA suppressed nitrogen metabolic gene expression. Neither ABA nor GA elicited significant effects on F. graminearum fungal growth or sporulation in axenic conditions, nor do these phytohormones affect trichothecene gene expression, deoxynivalenol mycotoxin accumulation, or SA/JA biosynthesis in F. graminearum-challenged wheat spikes. Finally, the combined application of GA and paclobutrazol, a Fusarium fungicide, provided additive effects on reducing FHB severity, highlighting the potential for combining fungicidal agents with select phytohormone-related treatments for management of FHB infection in wheat.
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Affiliation(s)
- Leann M Buhrow
- First, second, and fifth authors: National Research Council of Canada, Aquatic and Crop Resources Development, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9 Canada; third author: National Research Council of Canada, Information and Communication Technologies, 100 des Aboiteaux Street, Moncton, NB, E1A 7R1 Canada; fourth author: Agriculture and Agri-Food Canada, 5403 1st Ave S., Lethbridge, AB, T1J 4B1 Canada; and fifth author: Department of Biochemistry, University of Saskatchewan, 107 Wiggins Rd. Saskatoon, SK, S7N 5E5 Canada
| | - Dustin Cram
- First, second, and fifth authors: National Research Council of Canada, Aquatic and Crop Resources Development, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9 Canada; third author: National Research Council of Canada, Information and Communication Technologies, 100 des Aboiteaux Street, Moncton, NB, E1A 7R1 Canada; fourth author: Agriculture and Agri-Food Canada, 5403 1st Ave S., Lethbridge, AB, T1J 4B1 Canada; and fifth author: Department of Biochemistry, University of Saskatchewan, 107 Wiggins Rd. Saskatoon, SK, S7N 5E5 Canada
| | - Dan Tulpan
- First, second, and fifth authors: National Research Council of Canada, Aquatic and Crop Resources Development, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9 Canada; third author: National Research Council of Canada, Information and Communication Technologies, 100 des Aboiteaux Street, Moncton, NB, E1A 7R1 Canada; fourth author: Agriculture and Agri-Food Canada, 5403 1st Ave S., Lethbridge, AB, T1J 4B1 Canada; and fifth author: Department of Biochemistry, University of Saskatchewan, 107 Wiggins Rd. Saskatoon, SK, S7N 5E5 Canada
| | - Nora A Foroud
- First, second, and fifth authors: National Research Council of Canada, Aquatic and Crop Resources Development, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9 Canada; third author: National Research Council of Canada, Information and Communication Technologies, 100 des Aboiteaux Street, Moncton, NB, E1A 7R1 Canada; fourth author: Agriculture and Agri-Food Canada, 5403 1st Ave S., Lethbridge, AB, T1J 4B1 Canada; and fifth author: Department of Biochemistry, University of Saskatchewan, 107 Wiggins Rd. Saskatoon, SK, S7N 5E5 Canada
| | - Michele C Loewen
- First, second, and fifth authors: National Research Council of Canada, Aquatic and Crop Resources Development, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9 Canada; third author: National Research Council of Canada, Information and Communication Technologies, 100 des Aboiteaux Street, Moncton, NB, E1A 7R1 Canada; fourth author: Agriculture and Agri-Food Canada, 5403 1st Ave S., Lethbridge, AB, T1J 4B1 Canada; and fifth author: Department of Biochemistry, University of Saskatchewan, 107 Wiggins Rd. Saskatoon, SK, S7N 5E5 Canada
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14
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Yamashita Y, Ota M, Inoue Y, Hasebe Y, Okamoto M, Inukai T, Masuta C, Sakihama Y, Hashidoko Y, Kojima M, Sakakibara H, Inage Y, Takahashi K, Yoshihara T, Matsuura H. Chemical Promotion of Endogenous Amounts of ABA in Arabidopsis thaliana by a Natural Product, Theobroxide. PLANT & CELL PHYSIOLOGY 2016; 57:986-99. [PMID: 26917631 DOI: 10.1093/pcp/pcw037] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2015] [Accepted: 02/14/2016] [Indexed: 05/21/2023]
Abstract
Plant hormones are a group of structurally diverse small compounds that orchestrate the cellular processes governing proper plant growth and environmental adaptation. To understand the details of hormonal activity, we must study not only their inherent activities but also the cross-talk among plant hormones. In addition to their use in agriculture, plant chemical activators, such as probenazole and uniconazole, have made great contributions to understand hormonal cross-talk. However, the use of plant chemical activators is limited due to the lack of activators for certain hormones. For example, to the best of our knowledge, there are only a few chemical activators previously known to stimulate the accumulation of ABA in plants, such as absinazoles and proanthocyanidins. In many cases, antagonistic effects have been examined in experiments using exogenously applied ABA, although these studies did not account for biologically relevant concentrations. In this report, it was found that a natural product, theobroxide, had potential as a plant chemical activator for stimulating the accumulation of ABA. Using theobroxide, the antagonistic effect of ABA against GAs was proved without exogenously applying ABA or using mutant plants. Our results suggest that ABA levels could be chemically controlled to elicit ABA-dependent biological phenomena.
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Affiliation(s)
- Yudai Yamashita
- Laboratory of Natural Product Chemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Maremichi Ota
- Laboratory of Natural Product Chemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Yutaka Inoue
- Laboratory of Natural Product Chemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Youko Hasebe
- Laboratory of Cell Biology and Manipulation, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Masanori Okamoto
- Arid Land Research Center, Tottori University, Tottori, Japan PRESTO, Japan Science and Technology Agency, Saitama, Japan
| | - Tsuyoshi Inukai
- Laboratory of Cell Biology and Manipulation, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Chikra Masuta
- Laboratory of Cell Biology and Manipulation, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Yasuko Sakihama
- Laboratory of Ecological Biochemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Yasuyuki Hashidoko
- Laboratory of Ecological Biochemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Mikiko Kojima
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045 Japan
| | - Hitoshi Sakakibara
- RIKEN Center for Sustainable Resource Science, Yokohama, Kanagawa, 230-0045 Japan
| | - Yasuyuki Inage
- Japan Agricultural Cooperatives Minami Sorachi, Kuriyama, Yubari-gun, Hokkaido, 069-1511 Japan
| | - Kosaku Takahashi
- Laboratory of Natural Product Chemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Teruhiko Yoshihara
- Laboratory of Natural Product Chemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
| | - Hideyuki Matsuura
- Laboratory of Natural Product Chemistry, Division of Applied Bioscience, Research Faculty of Agriculture, Hokkaido University, Sapporo, 060-8589 Japan
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15
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Xu Q, Truong TT, Barrero JM, Jacobsen JV, Hocart CH, Gubler F. A role for jasmonates in the release of dormancy by cold stratification in wheat. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:3497-508. [PMID: 27140440 PMCID: PMC4892733 DOI: 10.1093/jxb/erw172] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Hydration at low temperatures, commonly referred to as cold stratification, is widely used for releasing dormancy and triggering germination in a wide range of species including wheat. However, the molecular mechanism that underlies its effect on germination has largely remained unknown. Our previous studies showed that methyl-jasmonate, a derivative of jasmonic acid (JA), promotes dormancy release in wheat. In this study, we found that cold-stimulated germination of dormant grains correlated with a transient increase in JA content and expression of JA biosynthesis genes in the dormant embryos after transfer to 20 (o)C. The induction of JA production was dependent on the extent of cold imbibition and precedes germination. Blocking JA biosynthesis with acetylsalicylic acid (ASA) inhibited the cold-stimulated germination in a dose-dependent manner. In addition, we have explored the relationship between JA and abscisic acid (ABA), a well-known dormancy promoter, in cold regulation of dormancy. We found an inverse relationship between JA and ABA content in dormant wheat embryos following stratification. ABA content decreased rapidly in response to stratification, and the decrease was reversed by addition of ASA. Our results indicate that the action of JA on cold-stratified grains is mediated by suppression of two key ABA biosynthesis genes, TaNCED1 and TaNCED2.
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Affiliation(s)
- Qian Xu
- Shandong Agricultural University, College of Agronomy, Taian, Shandong, China CSIRO Agriculture, Canberra ACT 2601, Australia
| | - Thy T Truong
- Mass Spectrometry Facility, Research School of Biology, Australian National University, Canberra ACT 2601, Australia
| | | | | | - Charles H Hocart
- Mass Spectrometry Facility, Research School of Biology, Australian National University, Canberra ACT 2601, Australia
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16
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Buhrow LM, Clark SM, Loewen MC. Identification of an attenuated barley stripe mosaic virus for the virus-induced gene silencing of pathogenesis-related wheat genes. PLANT METHODS 2016; 12:12. [PMID: 26839581 PMCID: PMC4736275 DOI: 10.1186/s13007-016-0112-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2015] [Accepted: 01/19/2016] [Indexed: 05/21/2023]
Abstract
BACKGROUND Virus-induced gene silencing (VIGS) has become an emerging technology for the rapid, efficient functional genomic screening of monocot and dicot species. The barley stripe mosaic virus (BSMV) has been described as an effective VIGS vehicle for the evaluation of genes involved in wheat and barley phytopathogenesis; however, these studies have been obscured by BSMV-induced phenotypes and defense responses. The utility of BSMV VIGS may be improved using a BSMV genetic background which is more tolerable to the host plant especially upon secondary infection of highly aggressive, necrotrophic pathogens such as Fusarium graminearum. RESULTS BSMV-induced VIGS in Triticum aestivum (bread wheat) cv. 'Fielder' was assessed for the study of wheat genes putatively related to Fusarium Head Blight (FHB), the necrotrophism of wheat and other cereals by F. graminearum. Due to the lack of 'Fielder' spike viability and increased accumulation of Fusarium-derived deoxynivalenol contamination upon co-infection of BSMV and FHB, an attenuated BSMV construct was generated by the addition of a glycine-rich, C-terminal peptide to the BSMV γ b protein. This attenuated BSMV effectively silenced target wheat genes while limiting disease severity, deoxynivalenol contamination, and yield loss upon Fusarium co-infection compared to the original BSMV construct. The attenuated BSMV-infected tissue exhibited reduced abscisic, jasmonic, and salicylic acid defense phytohormone accumulation upon secondary Fusarium infection. Finally, the attenuated BSMV was used to investigate the role of the salicylic acid-responsive pathogenesis-related 1 in response to FHB. CONCLUSIONS The use of an attenuated BSMV may be advantageous in characterizing wheat genes involved in phytopathogenesis, including Fusarium necrotrophism, where minimal viral background effects on defense are required. Additionally, the attenuated BSMV elicits reduced defense hormone accumulation, suggesting that this genotype may have applications for the investigation of phytohormone-related signaling, developmental responses, and pathogen defense.
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Affiliation(s)
- Leann M. Buhrow
- />Aquatic and Crop Resources Development Portfolio, National Research Council of Canada, 110 Gymnasium Place, Saskatoon, SK S7N 0W9 Canada
| | - Shawn M. Clark
- />Aquatic and Crop Resources Development Portfolio, National Research Council of Canada, 110 Gymnasium Place, Saskatoon, SK S7N 0W9 Canada
| | - Michele C. Loewen
- />Aquatic and Crop Resources Development Portfolio, National Research Council of Canada, 110 Gymnasium Place, Saskatoon, SK S7N 0W9 Canada
- />Department of Biochemistry, University of Saskatchewan, 107 Wiggins Rd., Saskatoon, SK S7N 5E5 Canada
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17
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Carvalho DRA, Torre S, Kraniotis D, Almeida DPF, Heuvelink E, Carvalho SMP. Elevated air movement enhances stomatal sensitivity to abscisic acid in leaves developed at high relative air humidity. FRONTIERS IN PLANT SCIENCE 2015; 6:383. [PMID: 26074943 PMCID: PMC4446533 DOI: 10.3389/fpls.2015.00383] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2015] [Accepted: 05/13/2015] [Indexed: 05/04/2023]
Abstract
High relative air humidity (RH ≥ 85%) during growth leads to stomata malfunctioning, resulting in water stress when plants are transferred to conditions of high evaporative demand. In this study, we hypothesized that an elevated air movement (MOV) 24 h per day, during the whole period of leaf development would increase abscisic acid concentration ([ABA]) enhancing stomatal functioning. Pot rose 'Toril' was grown at moderate (61%) or high (92%) RH combined with a continuous low (0.08 m s(-1)) or high (0.92 m s(-1)) MOV. High MOV reduced stomatal pore length and aperture in plants developed at high RH. Moreover, stomatal function improved when high MOV-treated plants were subjected to leaflet desiccation and ABA feeding. Endogenous concentration of ABA and its metabolites in the leaves was reduced by 35% in high RH, but contrary to our hypothesis this concentration was not significantly affected by high MOV. Interestingly, in detached leaflets grown at high RH, high MOV increased stomatal sensitivity to ABA since the amount of exogenous ABA required to decrease the transpiration rate was significantly reduced. This is the first study to show that high MOV increases stomatal functionality in leaves developed at high RH by reducing the stomatal pore length and aperture and enhancing stomatal sensitivity to ABA rather than increasing leaf [ABA].
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Affiliation(s)
- Dália R. A. Carvalho
- Centro de Biotecnologia e Química Fina – Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica PortuguesaPorto, Portugal
| | - Sissel Torre
- Department of Plant Sciences, Norwegian University of Life SciencesÅs, Norway
| | - Dimitrios Kraniotis
- Department of Mathematical Sciences and Technology, Norwegian University of Life SciencesÅs, Norway
| | | | - Ep Heuvelink
- Horticulture and Product Physiology Group, Department of Plant Sciences, Wageningen UniversityWageningen, The Netherlands
| | - Susana M. P. Carvalho
- Centro de Biotecnologia e Química Fina – Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica PortuguesaPorto, Portugal
- Horticulture and Product Physiology Group, Department of Plant Sciences, Wageningen UniversityWageningen, The Netherlands
- Faculty of Sciences, University of PortoPorto, Portugal
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18
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Doğramacı M, Foley ME, Horvath DP, Hernandez AG, Khetani RS, Fields CJ, Keating KM, Mikel MA, Anderson JV. Glyphosate's impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching. BMC Genomics 2015; 16:395. [PMID: 25986459 PMCID: PMC4437557 DOI: 10.1186/s12864-015-1627-9] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2014] [Accepted: 05/11/2015] [Indexed: 12/18/2022] Open
Abstract
BACKGROUND Leafy spurge (Euphorbia esula) is a perennial weed that is considered glyphosate tolerant, which is partially attributed to escape through establishment of new vegetative shoots from an abundance of underground adventitious buds. Leafy spurge plants treated with sub-lethal concentrations of foliar-applied glyphosate produce new vegetative shoots with reduced main stem elongation and increased branching. Processes associated with the glyphosate-induced phenotype were determined by RNAseq using aerial shoots derived from crown buds of glyphosate-treated and -untreated plants. Comparison between transcript abundance and accumulation of shikimate or phytohormones (abscisic acid, auxin, cytokinins, and gibberellins) from these same samples was also done to reveal correlations. RESULTS Transcriptome assembly and analyses confirmed differential abundance among 12,918 transcripts (FDR ≤ 0.05) and highlighted numerous processes associated with shoot apical meristem maintenance and stem growth, which is consistent with the increased number of actively growing meristems in response to glyphosate. Foliar applied glyphosate increased shikimate abundance in crown buds prior to decapitation of aboveground shoots, which induces growth from these buds, indicating that 5-enolpyruvylshikimate 3-phosphate (EPSPS) the target site of glyphosate was inhibited. However, abundance of shikimate was similar in a subsequent generation of aerial shoots derived from crown buds of treated and untreated plants, suggesting EPSPS is no longer inhibited or abundance of shikimate initially observed in crown buds dissipated over time. Overall, auxins, gibberellins (precursors and catabolites of bioactive gibberellins), and cytokinins (precursors and bioactive cytokinins) were more abundant in the aboveground shoots derived from glyphosate-treated plants. CONCLUSION Based on the overall data, we propose that the glyphosate-induced phenotype resulted from complex interactions involving shoot apical meristem maintenance, hormone biosynthesis and signaling (auxin, cytokinins, gibberellins, and strigolactones), cellular transport, and detoxification mechanisms.
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Affiliation(s)
- Münevver Doğramacı
- United States Department of Agriculture, Agricultural Research Service, Sunflower and Plant Biology Research, Fargo, ND, 58102, USA.
| | - Michael E Foley
- United States Department of Agriculture, Agricultural Research Service, Sunflower and Plant Biology Research, Fargo, ND, 58102, USA.
| | - David P Horvath
- United States Department of Agriculture, Agricultural Research Service, Sunflower and Plant Biology Research, Fargo, ND, 58102, USA.
| | - Alvaro G Hernandez
- University of Illinois, W.M. Keck Center for Comparative and Functional Genomics, Urbana, IL, 61801, USA.
| | - Radhika S Khetani
- University of Illinois, W.M. Keck Center for Comparative and Functional Genomics, Urbana, IL, 61801, USA.
| | - Christopher J Fields
- University of Illinois, W.M. Keck Center for Comparative and Functional Genomics, Urbana, IL, 61801, USA.
| | - Kathleen M Keating
- University of Illinois, W.M. Keck Center for Comparative and Functional Genomics, Urbana, IL, 61801, USA.
| | - Mark A Mikel
- Department of Crop Sciences, 2608 Institute for Genomic Biology, and Roy J. Carver Biotechnology Center, University of Illinois, Urbana, IL, 61801, USA.
| | - James V Anderson
- United States Department of Agriculture, Agricultural Research Service, Sunflower and Plant Biology Research, Fargo, ND, 58102, USA.
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19
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Arve LE, Carvalho DRA, Olsen JE, Torre S. ABA induces H2O2 production in guard cells, but does not close the stomata on Vicia faba leaves developed at high air humidity. PLANT SIGNALING & BEHAVIOR 2014; 9:e29192. [PMID: 25763494 PMCID: PMC4203566 DOI: 10.4161/psb.29192] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2014] [Revised: 05/09/2014] [Accepted: 05/09/2014] [Indexed: 05/22/2023]
Abstract
Plants developed under constant high (> 85%) relative air humidity (RH) have larger stomata that are unable to close completely. One of the hypotheses for the less responsive stomata is that the plants have reduced sensitivity to abscisic acid (ABA). Both ABA and darkness are signals for stomatal closure and induce the production of the secondary messenger hydrogen peroxide (H2O2). In this study, the ability of Vicia faba plants developed in moderate or high RH to close the stomata in response to darkness, ABA and H2O2 was investigated. Moreover, the ability of the plants to produce H2O2 when treated with ABA or transferred to darkness was also assessed. Our results show that the ABA concentration in moderate RH is not increased during darkness even though the stomata are closing. This indicates that stomatal closure in V. faba during darkness is independent of ABA production. ABA induced both H2O2 production and stomatal closure in stomata formed at moderate RH. H2O2 production, as a result of treatment with ABA, was also observed in stomata formed at high RH, though the closing response was considerably smaller as compared with moderate RH. In either RH, leaf ABA concentration was not affected by darkness. Similarly to ABA treatment, darkness elicited both H2O2 production and stomatal closure following plant cultivation at moderate RH. Contrary to this, neither H2O2 production nor stomatal closure took place when stomata were formed at high RH. These results suggest that the reduced stomatal response in plants developed in continuous high RH is caused by one or more factors downstream of H2O2 in the signaling pathway toward stomatal closure.
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Affiliation(s)
- Louise E Arve
- Norwegian University of Life Sciences; Department of Plant and Environmental Sciences; Aas, Norway
| | - Dália RA Carvalho
- CBQF-Centro de Biotecnologia e Química Fina-Laboratório Associado; Escola Superior de Biotecnologia; Universidade Católica Portuguesa/Porto; Porto, Portugal
| | - Jorunn E Olsen
- Norwegian University of Life Sciences; Department of Plant and Environmental Sciences; Aas, Norway
| | - Sissel Torre
- Norwegian University of Life Sciences; Department of Plant and Environmental Sciences; Aas, Norway
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Slater SMH, Yuan HY, Lulsdorf MM, Vandenberg A, Zaharia LI, Han X, Abrams SR. Comprehensive hormone profiling of the developing seeds of four grain legumes. PLANT CELL REPORTS 2013; 32:1939-52. [PMID: 24062013 DOI: 10.1007/s00299-013-1505-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2013] [Revised: 08/28/2013] [Accepted: 08/29/2013] [Indexed: 05/08/2023]
Abstract
KEY MESSAGE Developmental context and species-specific hormone requirements are of key importance in the advancement of in vitro protocols and manipulation of seed development. Improvement of in vitro tissue and cell culture protocols in grain legumes such as embryo rescue, interspecific hybridization, and androgenesis requires an understanding of the types, activity, and balance of hormones within developing seeds. Towards this goal, the concentration of auxin, cytokinin, gibberellin, and abscisic acid (ABA) and their precursors and derivatives were measured in the developing seeds of field pea (Pisum sativum L.), chickpea (Cicer arietinum L.), lentil (Lens culinaris Medik.), and faba bean (Vicia faba L.) from 4 days after anthesis until 8 days after reaching maximum fresh weight. The importance of developmental context (developmental time and space) is demonstrated in both the differences and similarities between species for hormone profiles, especially with regard to cytokinin and ABA biosynthesis during the embryo formation. Auxin and its conjugates are significant during the pattern formation stage of all legumes; however, IAA-Asparagine appears important in the Vicieae species and its concentrations are greater than IAA from the globular stage of embryo development on in multi-seed fruits. Finally, the significance of non-polar gibberellins during lentil seed development is highlighted.
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Affiliation(s)
- Susan M H Slater
- Crop Development Centre (CDC), University of Saskatchewan, 51 Campus Drive, Saskatoon, SK S7N 5A8, Canada,
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21
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Barrero JM, Mrva K, Talbot MJ, White RG, Taylor J, Gubler F, Mares DJ. Genetic, hormonal, and physiological analysis of late maturity α-amylase in wheat. PLANT PHYSIOLOGY 2013; 161:1265-77. [PMID: 23321420 PMCID: PMC3585595 DOI: 10.1104/pp.112.209502] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2012] [Accepted: 01/14/2013] [Indexed: 05/20/2023]
Abstract
Late maturity α-amylase (LMA) is a genetic defect that is commonly found in bread wheat (Triticum aestivum) cultivars and can result in commercially unacceptably high levels of α-amylase in harvest-ripe grain in the absence of rain or preharvest sprouting. This defect represents a serious problem for wheat farmers, and apart from the circumstantial evidence that gibberellins are somehow involved in the expression of LMA, the mechanisms or genes underlying LMA are unknown. In this work, we use a doubled haploid population segregating for constitutive LMA to physiologically analyze the appearance of LMA during grain development and to profile the transcriptomic and hormonal changes associated with this phenomenon. Our results show that LMA is a consequence of a very narrow and transitory peak of expression of genes encoding high-isoelectric point α-amylase during grain development and that the LMA phenotype seems to be a partial or incomplete gibberellin response emerging from a strongly altered hormonal environment.
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Affiliation(s)
- Jose M. Barrero
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
| | - Kolumbina Mrva
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
| | - Mark J. Talbot
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
| | - Rosemary G. White
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
| | - Jennifer Taylor
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
| | - Frank Gubler
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
| | - Daryl J. Mares
- Commonwealth Scientific and Industrial Research Organization Plant Industry, Canberra, Australian Capital Territory 2601, Australia (J.M.B., M.J.T., R.G.W., J.T., F.G.); and Plant and Pest Science, School of Agriculture, Food, and Wine, University of Adelaide, Waite Campus, Glen Osmond, South Australia 5064, Australia (K.M., D.J.M.)
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Arve LE, Terfa MT, Gislerød HR, Olsen JE, Torre S. High relative air humidity and continuous light reduce stomata functionality by affecting the ABA regulation in rose leaves. PLANT, CELL & ENVIRONMENT 2013; 36:382-92. [PMID: 22812416 DOI: 10.1111/j.1365-3040.2012.02580.x] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Plants developed under high (90%) relative air humidity (RH) have previously been shown to have large, malfunctioning stomata, which results in high water loss during desiccation and reduced dark induced closure. Stomatal movement is to a large extent regulated by abscisic acid (ABA). It has therefore been proposed that low ABA levels contribute to the development of malfunctioning stomata. In this study, we investigated the regulation of ABA content in rose leaves, through hormone analysis and β-glucosidase quantification. Compared with high RH, rose plants developed in moderate RH (60%) and 20 h photoperiod contained higher levels of ABA and β-glucosidase activity. Also, the amount of ABA increased during darkness simultaneously as the ABA-glucose ester (GE) levels decreased. In contrast, plants developed under high RH with 20 h photoperiod showed no increase in ABA levels during darkness, and had low β-glucosidase activity converting ABA-GE to ABA. Continuous lighting (24 h) resulted in low levels of β-glucosidase activity irrespective of RH, indicating that a dark period is essential to activate β-glucosidase. Our results provide new insight into the regulation of ABA under different humidities and photoperiods, and clearly show that β-glucosidase is a key enzyme regulating the ABA pool in rose plants.
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Affiliation(s)
- Louise E Arve
- Department of Plant and Environmental Sciences, Norwegian University of Life Sciences, PO Box 5003, 1432 Aas, Norway
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23
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Zhou G, Liu Y, Luo M, Xu Q, Ji X, He Z. Peptide-capped gold nanoparticle for colorimetric immunoassay of conjugated abscisic acid. ACS APPLIED MATERIALS & INTERFACES 2012; 4:5010-5015. [PMID: 22906007 DOI: 10.1021/am301380q] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
The pentapeptide Cys-Ala-Leu-Asn-Asn (CALNN) has been proved to be a powerful tool to stabilize the AuNPs. These CALNN-capped AuNPs have been used to develop various bioanalysis platforms. In this paper, the CALNN-capped AuNPs are proved to be a robust tool for aggregation-based colorimetric immunoassays as well. A colorimetric immunoassay strategy based upon the antibody-induced assembly of functionalized AuNPs for Abscisic Acid glucose ester (ABA-GE) determination has been developed. The ABA-functionalized AuNPs aggregate in the presence of specific antibody, accompanied by a color change of the solution. The color change is competitively inhibited by ABA-GE. The interparticle distance in aggregates is small due to the thin peptide layer on the AuNPs surface, and it is determined by the "Y" shape antibody linker as well. As a result of that, an obvious color change in the immunoassays is observed. Under the optimized conditions, a linear response range from 5 nM to 10 μM for ABA-GE determination is obtained, and the limit of detection (LOD) is evaluated to be 2.2 nM. This method is simple, homogeneous, and has potential for visual detection of ABA-GE.
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Affiliation(s)
- Guohua Zhou
- Key Laboratory of Analytical Chemistry for Biology and Medicine (Ministry of Education), College of Chemistry and Molecular Sciences, Wuhan University, Wuhan 430072, China
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Lulsdorf M, Yuan HY, Slater S, Vandenberg A, Han X, Zaharia LI. Androgenesis-inducing stress treatments change phytohormone levels in anthers of three legume species (Fabaceae). PLANT CELL REPORTS 2012; 31:1255-67. [PMID: 22399205 DOI: 10.1007/s00299-012-1246-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2012] [Revised: 02/22/2012] [Accepted: 02/27/2012] [Indexed: 05/31/2023]
Abstract
UNLABELLED Legumes are recalcitrant to androgenesis and induction protocols were only recently developed for pea (Pisum sativum L.) and chickpea (Cicer arietinum L.), albeit with low regeneration frequencies. Androgenesis is thought to be mediated through abscisic acid (ABA) but other phytohormones, such as auxins, cytokinins, and gibberellins, have also been implicated. In view of improving induction protocols, the hormone content of pea, chickpea, and lentil anthers was measured after exposure to cold, centrifugation, electroporation, sonication, osmotic shock, or various combinations thereof using an analytical mass spectrometer. Indole-3-acetic acid (IAA) had a key function during the induction process. In pea, high concentrations of IAA-asparagine (IAA-Asp), a putative IAA metabolite, accumulated during the application of the different stresses. In chickpea, the IAA-Asp concentration increased 30-fold compared to pea but only during the osmotic shock treatment and likely as a result of the presence of exogenous IAA in the medium. In contrast, no treatment in lentil (Lens culinaris) invoked such an increase in IAA-Asp content. Of the various cytokinins monitored, only cis zeatin riboside increased after centrifugation and electroporation in pea and possibly chickpea. No bioactive gibberellins were detected in any species investigated, indicating that this hormone group is likely not linked to androgenesis in legumes. In contrast to the other stresses, osmotic shock treatment caused a reduction in the levels of all hormones analyzed, with the exception of IAA-Asp in chickpea. A short period of low hormone content might be a necessary transition phase for androgenesis induction of legumes. KEY MESSAGE Five androgenesis-inducing stress treatments changed content of ABA, auxin and cytokinin in anthers of three legumes. Osmotic shock treatment differed because it reduced hormone content to very low levels.
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Affiliation(s)
- Monika Lulsdorf
- Crop Development Centre-CDC, University of Saskatchewan, 51 Campus Drive, Saskatoon, SK S7N5A8, Canada.
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25
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Zifkin M, Jin A, Ozga JA, Zaharia LI, Schernthaner JP, Gesell A, Abrams SR, Kennedy JA, Constabel CP. Gene expression and metabolite profiling of developing highbush blueberry fruit indicates transcriptional regulation of flavonoid metabolism and activation of abscisic acid metabolism. PLANT PHYSIOLOGY 2012; 158:200-24. [PMID: 22086422 PMCID: PMC3252089 DOI: 10.1104/pp.111.180950] [Citation(s) in RCA: 170] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2011] [Accepted: 10/25/2011] [Indexed: 05/19/2023]
Abstract
Highbush blueberry (Vaccinium corymbosum) fruits contain substantial quantities of flavonoids, which are implicated in a wide range of health benefits. Although the flavonoid constituents of ripe blueberries are known, the molecular genetics underlying their biosynthesis, localization, and changes that occur during development have not been investigated. Two expressed sequence tag libraries from ripening blueberry fruit were constructed as a resource for gene identification and quantitative real-time reverse transcription-polymerase chain reaction primer design. Gene expression profiling by quantitative real-time reverse transcription-polymerase chain reaction showed that flavonoid biosynthetic transcript abundance followed a tightly regulated biphasic pattern, and transcript profiles were consistent with the abundance of the three major classes of flavonoids. Proanthocyanidins (PAs) and corresponding biosynthetic transcripts encoding anthocyanidin reductase and leucoanthocyanidin reductase were most concentrated in young fruit and localized predominantly to the inner fruit tissue containing the seeds and placentae. Mean PA polymer length was seven to 8.5 subunits, linked predominantly via B-type linkages, and was relatively constant throughout development. Flavonol accumulation and localization patterns were similar to those of the PAs, and the B-ring hydroxylation pattern of both was correlated with flavonoid-3'-hydroxylase transcript abundance. By contrast, anthocyanins accumulated late in maturation, which coincided with a peak in flavonoid-3-O-glycosyltransferase and flavonoid-3'5'-hydroxylase transcripts. Transcripts of VcMYBPA1, which likely encodes an R2R3-MYB transcriptional regulator of PA synthesis, were prominent in both phases of development. Furthermore, the initiation of ripening was accompanied by a substantial rise in abscisic acid, a growth regulator that may be an important component of the ripening process and contribute to the regulation of blueberry flavonoid biosynthesis.
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Kepka M, Benson CL, Gonugunta VK, Nelson KM, Christmann A, Grill E, Abrams SR. Action of natural abscisic acid precursors and catabolites on abscisic acid receptor complexes. PLANT PHYSIOLOGY 2011; 157:2108-19. [PMID: 21976481 PMCID: PMC3327214 DOI: 10.1104/pp.111.182584] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
The phytohormone abscisic acid (ABA) regulates stress responses and controls numerous aspects of plant growth and development. Biosynthetic precursors and catabolites of ABA have been shown to trigger ABA responses in physiological assays, but it is not clear whether these are intrinsically active or whether they are converted into ABA in planta. In this study, we analyzed the effect of ABA precursors, conjugates, and catabolites on hormone signaling in Arabidopsis (Arabidopsis thaliana). The compounds were also tested in vitro for their ability to regulate the phosphatase moiety of ABA receptor complexes consisting of the protein phosphatase 2C ABI2 and the coreceptors RCAR1/PYL9, RCAR3/PYL8, and RCAR11/PYR1. Using mutants defective in ABA biosynthesis, we show that the physiological activity associated with ABA precursors derives predominantly from their bioconversion to ABA. The ABA glucose ester conjugate, which is the most widespread storage form of ABA, showed weak ABA-like activity in germination assays and in triggering ABA signaling in protoplasts. The ABA conjugate and precursors showed negligible activity as a regulatory ligand of the ABI2/RCAR receptor complexes. The majority of ABA catabolites were inactive in our assays. To analyze the chemically unstable 8'- and 9'-hydroxylated ABA catabolites, we used stable tetralone derivatives of these compounds, which did trigger selective ABA responses. ABA synthetic analogs exhibited differential activity as regulatory ligands of different ABA receptor complexes in vitro. The data show that ABA precursors, catabolites, and conjugates have limited intrinsic bioactivity and that both natural and synthetic ABA-related compounds can be used to probe the structural requirements of ABA ligand-receptor interactions.
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Zhang Q, Pettolino FA, Dhugga KS, Rafalski JA, Tingey S, Taylor J, Shirley NJ, Hayes K, Beatty M, Abrams SR, Zaharia LI, Burton RA, Bacic A, Fincher GB. Cell wall modifications in maize pulvini in response to gravitational stress. PLANT PHYSIOLOGY 2011; 156:2155-71. [PMID: 21697508 PMCID: PMC3149947 DOI: 10.1104/pp.111.179606] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2011] [Accepted: 06/17/2011] [Indexed: 05/25/2023]
Abstract
Changes in cell wall polysaccharides, transcript abundance, metabolite profiles, and hormone concentrations were monitored in the upper and lower regions of maize (Zea mays) pulvini in response to gravistimulation, during which maize plants placed in a horizontal position returned to the vertical orientation. Heteroxylan levels increased in the lower regions of the pulvini, together with lignin, but xyloglucans and heteromannan contents decreased. The degree of substitution of heteroxylan with arabinofuranosyl residues decreased in the lower pulvini, which exhibited increased mechanical strength as the plants returned to the vertical position. Few or no changes in noncellulosic wall polysaccharides could be detected on the upper side of the pulvinus, and crystalline cellulose content remained essentially constant in both the upper and lower pulvinus. Microarray analyses showed that spatial and temporal changes in transcript profiles were consistent with the changes in wall composition that were observed in the lower regions of the pulvinus. In addition, the microarray analyses indicated that metabolic pathways leading to the biosynthesis of phytohormones were differentially activated in the upper and lower regions of the pulvinus in response to gravistimulation. Metabolite profiles and measured hormone concentrations were consistent with the microarray data, insofar as auxin, physiologically active gibberellic acid, and metabolites potentially involved in lignin biosynthesis increased in the elongating cells of the lower pulvinus.
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Kanno Y, Jikumaru Y, Hanada A, Nambara E, Abrams SR, Kamiya Y, Seo M. Comprehensive hormone profiling in developing Arabidopsis seeds: examination of the site of ABA biosynthesis, ABA transport and hormone interactions. PLANT & CELL PHYSIOLOGY 2010; 51:1988-2001. [PMID: 20959378 DOI: 10.1093/pcp/pcq158] [Citation(s) in RCA: 135] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
ABA plays important roles in many aspects of seed development, including accumulation of storage compounds, acquisition of desiccation tolerance, induction of seed dormancy and suppression of precocious germination. Quantification of ABA in the F(1) and F(2) populations originated from crosses between the wild type and an ABA-deficient mutant aba2-2 demonstrated that ABA was synthesized in both maternal and zygotic tissues during seed development. In the absence of zygotic ABA, ABA synthesized in maternal tissues was translocated into the embryos and partially induced seed dormancy. We also analyzed the levels of ABA metabolites, gibberellins, IAA, cytokinins, jasmonates and salicylic acid (SA) in the developing seeds of the wild type and aba2-2. ABA metabolites accumulated differentially in the silique and seed tissues during development. Endogenous levels of SA were elevated in aba2-2 in the later developmental stages, whereas that of IAA was reduced compared with the wild type. These data suggest that ABA metabolism depends on developmental stages and tissues, and that ABA interacts with other hormones to regulate seed developmental processes.
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Affiliation(s)
- Yuri Kanno
- RIKEN Plant Science Center, Yokohama, Kanagawa, 230-0045 Japan
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29
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Zhang Z, Zhang W, Ji YP, Zhao Y, Wang CG, Hu JF. Gynostemosides A-E, megastigmane glycosides from Gynostemma pentaphyllum. PHYTOCHEMISTRY 2010; 71:693-700. [PMID: 20097393 DOI: 10.1016/j.phytochem.2009.12.017] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2009] [Revised: 10/12/2009] [Accepted: 12/28/2009] [Indexed: 05/28/2023]
Abstract
Megastigmane glycosides (1-5) together with seven (6-12) related known compounds were isolated from the whole plants of Gynostemma pentaphyllum. The structures were elucidated by means of spectroscopic methods, including 2D NMR, HR-ESIMS, and circular dichroism (CD), as well as chemical transformations to be (3R,4R,5S,6S,7E)-3,4,6-trihydroxymegastigmane-7-en-9-one-3-O-beta-D-glucopyranoside (gynostemoside A, 1), (3S,4S,5R,6R,7E,9R)-3,4,6,9-tetrahydroxymegastigmane-7-en-3-O-beta-D-glucopyranoside (gynostemoside B, 2), (3S,4S,5S,6S,7E,9R)-3,4,9-trihydroxymegastigmane-7-en-9-O-beta-D-glucopyranoside (gynostemoside C, 3), (3S,4S,5S,6S,7E,9R)-3,4,9-trihydroxymegastigmane-7-en-3-O-beta-D-glucopyranoside (gynostemoside D, 4), and (3S,4S,5S,6S,7E,9R)-3,4,9-trihydroxymegastigmane-7-en-4-O-beta-D-glucopyranoside (gynostemoside E, 5), respectively.
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Affiliation(s)
- Zhen Zhang
- Department of Natural Products for Chemical Genetic Research, Key Laboratory of Brain Functional Genomics, Ministry of Education, East China Normal University, Shanghai, PR China
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30
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Sharma N, Anderson M, Kumar A, Zhang Y, Giblin EM, Abrams SR, Zaharia LI, Taylor DC, Fobert PR. Transgenic increases in seed oil content are associated with the differential expression of novel Brassica-specific transcripts. BMC Genomics 2008; 9:619. [PMID: 19099582 PMCID: PMC2627897 DOI: 10.1186/1471-2164-9-619] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2008] [Accepted: 12/19/2008] [Indexed: 11/26/2022] Open
Abstract
Background Seed oil accumulates primarily as triacylglycerol (TAG). While the biochemical pathway for TAG biosynthesis is known, its regulation remains unclear. Previous research identified microsomal diacylglycerol acyltransferase 1 (DGAT1, EC 2.3.1.20) as controlling a rate-limiting step in the TAG biosynthesis pathway. Of note, overexpression of DGAT1 results in substantial increases in oil content and seed size. To further analyze the global consequences of manipulating DGAT1 levels during seed development, a concerted transcriptome and metabolome analysis of transgenic B. napus prototypes was performed. Results Using a targeted Brassica cDNA microarray, about 200 genes were differentially expressed in two independent transgenic lines analyzed. Interestingly, 24–33% of the targets showing significant changes have no matching gene in Arabidopsis although these represent only 5% of the targets on the microarray. Further analysis of some of these novel transcripts indicated that several are inducible by ABA in microspore-derived embryos. Of the 200 Arabidopsis genes implicated in lipid biology present on the microarray, 36 were found to be differentially regulated in DGAT transgenic lines. Furthermore, kinetic reverse transcriptase Polymerase Chain Reaction (k-PCR) analysis revealed up-regulation of genes encoding enzymes of the Kennedy pathway involved in assembly of TAGs. Hormone profiling indicated that levels of auxins and cytokinins varied between transgenic lines and untransformed controls, while differences in the pool sizes of ABA and catabolites were only observed at later stages of development. Conclusion Our results indicate that the increased TAG accumulation observed in transgenic DGAT1 plants is associated with modest transcriptional and hormonal changes during seed development that are not limited to the TAG biosynthesis pathway. These might be associated with feedback or feed-forward effects due to altered levels of DGAT1 activity. The fact that a large fraction of significant amplicons have no matching genes in Arabidopsis compromised our ability to draw concrete inferences from the data at this stage, but has led to the identification of novel genes of potential interest.
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Affiliation(s)
- Nirmala Sharma
- National Research Council Canada, Plant Biotechnology Institute, NRC, 101 Gymnasium Place, Saskatoon SKS7N0W9, Canada.
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Huang D, Wu W, Abrams SR, Cutler AJ. The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. JOURNAL OF EXPERIMENTAL BOTANY 2008; 59:2991-3007. [PMID: 18552355 PMCID: PMC2504347 DOI: 10.1093/jxb/ern155] [Citation(s) in RCA: 282] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2008] [Revised: 05/02/2008] [Accepted: 05/07/2008] [Indexed: 05/18/2023]
Abstract
Almost 2000 drought-responsive genes were identified in Arabidopsis thaliana under progressive soil drought stress using whole-genome oligonucleotide microarrays. Most of the drought-regulated genes recovered to normal expression levels by 3 h after rewatering. It has previously been shown that the abscisic acid (ABA) analogue (+)-8'-acetylene-ABA (PBI425) hyperinduces many ABA-like changes in gene expression to reveal a more complete list of ABA-regulated genes, and it is demonstrated here that PBI425 produced a correspondingly increased drought tolerance. About two-thirds of drought-responsive genes (1310 out of 1969) were regulated by ABA and/or the ABA analogue PBI425. Analysis of promoter motifs suggests that many of the remaining drought-responsive genes may be affected by ABA signalling. Concentrations of endogenous ABA and its catabolites significantly increased under drought stress and either completely (ABA) or partially (ABA catabolites) recovered to normal levels by 3 h after rehydration. Detailed analyses of drought transcript profiles and in silico comparisons with other studies revealed that the ABA-dependent pathways are predominant in the drought stress responses. These comparisons also showed that other plant hormones including jasmonic acid, auxin, cytokinin, ethylene, brassinosteroids, and gibberellins also affected drought-related gene expression, of which the most significant was jasmonic acid. There is also extensive cross-talk between responses to drought and other environmental factors including light and biotic stresses. These analyses demonstrate that ABA-related stress responses are modulated by other environmental and developmental factors.
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Affiliation(s)
- Daiqing Huang
- Plant Biotechnology Institute, National Research Council of Canada, 110 Gymnasium Place, Saskatoon S7N 0W9, Canada
| | - Weiren Wu
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, Zhejiang, 310027 China
| | - Suzanne R. Abrams
- Plant Biotechnology Institute, National Research Council of Canada, 110 Gymnasium Place, Saskatoon S7N 0W9, Canada
| | - Adrian J. Cutler
- Plant Biotechnology Institute, National Research Council of Canada, 110 Gymnasium Place, Saskatoon S7N 0W9, Canada
- To whom correspondence should be addressed. E-mail:
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Huang D, Jaradat MR, Wu W, Ambrose SJ, Ross AR, Abrams SR, Cutler AJ. Structural analogs of ABA reveal novel features of ABA perception and signaling in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2007; 50:414-28. [PMID: 17376162 DOI: 10.1111/j.1365-313x.2007.03056.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Changes in gene expression produced by the application of (+)-abscisic acid (ABA) to Arabidopsis thaliana plants were compared with changes produced by the ABA structural analogs (-)-ABA, (+)-8'-acetylene ABA and (-)-2',3'-dihydroacetylenic abscisyl alcohol. The maximum expression of many rapidly (+)-ABA-induced genes occurred prior to peak hormone accumulation, suggesting negative feedback regulation that may be mediated by the induction of genes encoding PP2C-type protein phosphatases. For most rapidly (+)-ABA-induced genes, expression was delayed in ABA analog treatments although analogs accumulated to higher levels than did (+)-ABA. For each analog, some genes exhibited a hypersensitive response to the analog and some genes were less sensitive to the analog than to (+)-ABA. Variations in the sensitivity of gene expression to (+)-ABA and analogs reflect the different structural requirements of two or more classes of hormone receptors. By using ABA analogs to reveal and confirm weakly (+)-ABA-regulated genes, we estimate that 14% of Arabidopsis genes are ABA-regulated in aerial tissues. Treatments with the analog (+)-8'-acetylene ABA (PBI425) led to the identification of new ABA-regulated genes. As an example, the transcription factor MYBR1 was significantly induced by PBI425, but not by (+)-ABA, and is shown to play a role in ABA signaling by phenotypic analysis of gain-of-function and loss-of-function mutants.
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Affiliation(s)
- Daiqing Huang
- Plant Biotechnology Institute, National Research Council of Canada, 110 Gymnasium Place, Saskatoon S7N 0W9, Canada
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Priest DM, Ambrose SJ, Vaistij FE, Elias L, Higgins GS, Ross ARS, Abrams SR, Bowles DJ. Use of the glucosyltransferase UGT71B6 to disturb abscisic acid homeostasis in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2006; 46:492-502. [PMID: 16623908 DOI: 10.1111/j.1365-313x.2006.02701.x] [Citation(s) in RCA: 123] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
A glucosyltransferase (GT) of Arabidopsis, UGT71B6, recognizing the naturally occurring enantiomer of abscisic acid (ABA) in vitro, has been used to disturb ABA homeostasis in planta. Transgenic plants constitutively overexpressing UGT71B6 (71B6-OE) have been analysed for changes in ABA and the related ABA metabolites abscisic acid glucose ester (ABA-GE), phaseic acid (PA), dihydrophaseic acid (DPA), 7'-hydroxyABA and neo-phaseic acid. Overexpression of the GT led to massive accumulation of ABA-GE and reduced levels of the oxidative metabolites PA and DPA, but had marginal effect on levels of free ABA. The control of ABA homeostasis, as reflected in levels of the different metabolites, differed in the 71B6-OEs whether the plants were grown under standard conditions or subjected to wilt stress. The impact of increased glucosylation of ABA on ABA-related phenotypes has also been assessed. Increased glucosylation of ABA led to phenotypic changes in post-germinative growth. The use of two structural analogues of ABA, known to have biological activity but to differ in their capacity to act as substrates for 71B6 in vitro, confirmed that the phenotypic changes arose specifically from the increased glucosylation caused by overexpression of 71B6. The phenotype and profile of ABA and related metabolites in a knockout line of 71B6, relative to wild type, has been assessed during Arabidopsis development and following stress treatments. The lack of major changes in these parameters is discussed in the context of functional redundancy of the multigene family of GTs in Arabidopsis.
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Affiliation(s)
- David M Priest
- CNAP, Department of Biology (Area 8), University of York, York YO10 5YW, UK
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Current awareness in phytochemical analysis. PHYTOCHEMICAL ANALYSIS : PCA 2006; 17:134-41. [PMID: 16634291 DOI: 10.1002/pca.881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
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Lin BL, Wang HJ, Wang JS, Zaharia LI, Abrams SR. Abscisic acid regulation of heterophylly in Marsilea quadrifolia L.: effects of R-(-) and S-(+) isomers. JOURNAL OF EXPERIMENTAL BOTANY 2005; 56:2935-48. [PMID: 16203756 DOI: 10.1093/jxb/eri290] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
The plant hormone abscisic acid (ABA) induces a developmental switch in the aquatic fern Marsilea quadrifolia, causing the formation of aerial type characteristics, including the elongation of petioles and roots, a change in leaf morphology, the expansion of leaf surface area, and the shortening of the internodes. A number of ABA-responsive heterophylly (ABRH) genes are induced early during the transition. Using optically pure isomers of ABA, it was found that both the natural S-(+)-ABA and the unnatural R-(-)-ABA are capable of inducing a heterophyllous switch and regulating ABRH gene expression. When dose responses are compared, the unnatural ABA gives stronger morphogenic effects than the natural ABA at the same concentration, it is effective at lower concentrations, and its optimal concentration is also lower compared with the natural ABA. Deuterium-labelled ABA enantiomers were used to trace the fate of applied ABA and to distinguish the applied compound and its metabolites from the endogenous counterparts. In tissues, the supplied (+)-ABA was metabolized principally to dihydrophaseic acid, while the supplied (-)-ABA was converted at a slower rate to 7'-hydroxy abscisic acid. Treatment with either enantiomer resulted in increased biosynthesis of ABA, as reflected in the accumulation of endogenous dihydrophaseic acid. Taken together, these results suggest two distinct mechanisms of action for (-)-ABA: either (-)-ABA is intrinsically active, or its activity is due to the stimulation of ABA biosynthesis.
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Affiliation(s)
- Bai-Ling Lin
- Molecular and Cell Biology Division, Development Center for Biotechnology, 101 Lane 169 Konning Street, Hsichih 22143, Taiwan
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Priest DM, Jackson RG, Ashford DA, Abrams SR, Bowles DJ. The use of abscisic acid analogues to analyse the substrate selectivity of UGT71B6, a UDP-glycosyltransferase ofArabidopsis thaliana. FEBS Lett 2005; 579:4454-8. [PMID: 16083885 DOI: 10.1016/j.febslet.2005.06.084] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2005] [Revised: 06/16/2005] [Accepted: 06/23/2005] [Indexed: 11/25/2022]
Abstract
This study analyses the activity of an Arabidopsis thaliana UDP-glycosyltransferase, UGT71B6 (71B6), towards abscisic acid (ABA) and its structural analogues. The enzyme preferentially glucosylated ABA and not its catabolites. The requirement for a specific chiral configuration of (+)-ABA was demonstrated through the use of analogues with the chiral centre changed or removed. The enzyme was able to accommodate extra bulk around the double bond of the ABA ring but not alterations to the 8'- and 9'-methyl groups. Interestingly, the ketone of ABA was not required for glucosylation. Bioactive analogues, resistant to 8'-hydroxylation, were also poor substrates for conjugation by UGT71B6. This suggests the compounds may be resistant to both pathways of ABA inactivation and may, therefore, prove to be useful agrochemicals for field applications.
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Affiliation(s)
- David M Priest
- CNAP, Department of Biology (Area 8), University of York, York YO10 5YW, United Kingdom
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