Arsenic uptake, accumulation and toxicity in rice plants: Possible remedies for its detoxification: A review

Determining arsenic stress tolerance genes in rice (Oryza sativa L.) via genomic insights and QTL mapping with double haploid lines

Arsenic, a hazardous heavy metal with potent carcinogenic properties, significantly affects key rice-producing regions worldwide. In this study, we present a quantitative trait locus (QTL) mapping investigation designed to identify candidate genes responsible for conferring tolerance to arsenic toxicity in rice (Oryza sativa L.) during the seedling stage. This study identified 17 QTLs on different chromosomes, including qCHC-1 and qCHC-3 on chromosome 1 and 3 related to chlorophyll content and qRFW-12 on chromosome 12 related to root fresh weight. Gene expression analysis revealed eight candidate genes exhibited significant upregulation in the resistant lines, OsGRL1, OsDjB1, OsZIP2, OsMATE12, OsTRX29, OsMADS33, OsABCG29, and OsENODL24. These genes display sequence alignment and phylogenetic tree similarities with other species and engaging in protein-protein interactions with significant proteins. Advanced gene-editing techniques such as CRISPR-Cas9 to precisely target and modify the candidate genes responsible for arsenic tolerance will be explore. This approach may expedite the development of arsenic-resistant rice cultivars, which are essential for ensuring food security in regions affected by arsenic-contaminated soil and water.

Design and application of metal organic frameworks for heavy metals adsorption in water: a review

The growing apprehension surrounding heavy metal pollution in both environmental and industrial contexts has spurred extensive research into adsorption materials aimed at efficient remediation. Among these materials, Metal-Organic Frameworks (MOFs) have risen as versatile and promising contenders due to their adjustable properties, expansive surface areas, and sustainable characteristics, compared to traditional options like activated carbon and zeolites. This exhaustive review delves into the synthesis techniques, structural diversity, and adsorption capabilities of MOFs for the effective removal of heavy metals. The article explores the evolution of MOF design and fabrication methods, highlighting pivotal parameters influencing their adsorption performance, such as pore size, surface area, and the presence of functional groups. In this perspective review, a thorough analysis of various MOFs is presented, emphasizing the crucial role of ligands and metal nodes in adapting MOF properties for heavy metal removal. Moreover, the review delves into recent advancements in MOF-based composites and hybrid materials, shedding light on their heightened adsorption capacities, recyclability, and potential for regeneration. Challenges for optimization, regeneration efficiency and minimizing costs for large-scale applications are discussed.

How Fe-bearing materials affect soil arsenic bioavailability to rice: A meta-analysis

Arsenic (As) contamination is widespread in soil and poses a threat to agricultural products and human health due to its high susceptibility to absorption by rice. Fe-bearing materials (Fe-Mat) display significant potential for reducing As bioavailability in soil and bioaccumulation in rice. However, the remediation effect of various Fe-Mat is often inconsistent, and the response to diverse environmental factors is ambiguous. Here, we conducted a meta-analysis to quantitatively assess the effects of As in soils, rice roots, and grains based on 673, 321, and 305 individual observations from 67 peer-reviewed articles, respectively. On average, Fe-Mat reduced As bioavailability in soils, rice roots, and grains by 28.74 %, 33.48 %, and 44.61 %, respectively. According to the analysis of influencing factors, the remediation efficiency of Fe-Mat on As-contaminated soil was significantly enhanced with increasing Fe content in the material, in which the industry byproduct was the most effective in soils (-42.31 %) and rice roots (-44.57 %), while Fe-biochar was superior in rice grains (-54.62 %). The efficiency of Fe-Mat in minimizing soil As mobility was negatively correlated with soil Fe content, CEC, and pH. In addition, applying Fe-Mat in alkaline soils with higher silt, lower clay and available P was more effective in reducing As in rice grains. A higher efficiency of applying Fe-Mat under continuous flooding conditions (27.39 %) compared with alternate wetting and drying conditions (23.66 %) was also identified. Our results offer an important reference for the development of remediation strategies and methods for various As-contaminated paddy soils.

Unveiling the significance of foliar-applied silicon, selenium and phosphorus for the management and remediation of arsenic in two different rice genotypes

Under paddy soil conditions, rice plants are vulnerable to arsenic (As) accumulation, thus causing potential threat to human health. Here we investigated the influence of foliar-applied phosphorus (P: 10 and 20 mg L-1), silicon (Si: 0.6 and 1.5 g L-1) and selenium (Se: 5 and 10 mg L-1) on As accumulation, morphological and physiological attributes of two contrasting rice genotypes (KSK-133 and Super Basmati) under As stress (25 mg kg-1 as arsenate). Silicon foliar dressing significantly (p < 0.05) reduced grain As uptake (up to 67%) and improved rice growth and chlorophyll content (28-66%) in both rice genotypes over their controls. Phosphorus foliar application resulted in a notable decrease (17%) in grain As uptake of coarse rice genotype (KSK-133), while it slightly increased grain As uptake in the fine one (Super Basmati; 6%) compared to controls. However, foliar-applied Se did not show significant effects on rice plants growth attributes and As uptake in both genotypes. Similarly, biochemical and enzymatic attributes (i.e., lipid peroxidation, electrolyte leakage, peroxidase and catalase) were improved with Si application in rice plants, except for P treatment that was only effective for coarse one. Foliar-applied Si also resulted in reduced cancer risk and hazard quotient (< 0.10) for both rice genotypes. This study advances our understanding on critical role of different foliar-applied nutrients and rice genotypes, which is imperative to develop effective As remediation and management strategies in coarse and fine rice genotypes and protect human health.

Implications of ZnO Nanoparticles and S-Nitrosoglutathione on Nitric Oxide, Reactive Oxidative Species, Photosynthetic Pigments, and Ionomic Profile in Rice

Zinc is an important nutrient for several plants and humans. Nitric oxide (NO) is a free radical that is important to biological processes that mediate the growth and mitigation of biotic and abiotic stresses in plants. The present study investigated the enzymatic and photosynthetic profile and the accumulation of macro- and microelements in rice plants (Oryza sativa L.) that received foliar treatments of zinc oxide nanoparticles (ZnO NPs), nitric oxide donor (GSNO), and the association of both (GSNO-ZnO NPs). Zinc concentration in rice husks increased by 66% and 68% in plants treated with ZnO NPs and GSNO-ZnO NPs, respectively. The GSNO treatment caused an increase of 25% in the Fe concentration in the rice grains. Only a small disturbance of the antioxidant system was observed, with increases in H2O2, S-NO, and NO2-, mainly in the group treated with GSNO-ZnO NPs; however, the disturbance did not affect the yield, the growth, or vital processes, such as as photosynthetic pigments production. There was an increase in chlorophyll B of 290% and an increase in chlorophyll A of 187% when ZnO NPs was applied. GSNO-ZnO NPs increased chlorophyll B by 345% and chlorophyll A by 345%, indicating that the treatments GSNO, ZnO NPs, and GSNO-ZnO NPs reduced possible oxidative stress and helped as protective treatments.

Zinc oxide nanoparticles mitigated the arsenic induced oxidative stress through modulation of physio-biochemical aspects and nutritional ions homeostasis in rice (Oryza sativa L.)

Zinc oxide nanoparticles (nZn) have emerged as vital agents in combating arsenic (As) stress in plants. However, their role in mitigation of As induced oxidative stress is less studied. Therefore, this study aimed to assess the comparative role of nZn and ZnO in alleviating As toxicity in rice genotype "9311". The results of this study revealed that nZn demonstrated superior efficacy compared to ZnO in mitigating As toxicity. This superiority can be attributed to the unique size and structure of nZn, which enhances its ability to alleviate As toxicity. Exposure to As at a concentration of 25 μM L-1 led to significant reductions in shoot length, root length, shoot dry weight, and root dry weight by 39%, 51%, 30%, and 46%, respectively, while the accumulation of essential nutrients such as magnesium (Mg), potassium (K), iron (Fe), manganese (Mn), and zinc (Zn) decreased by 25%-47% compared to the control plants. Additionally, As exposure resulted in stomatal closure and structural damage to vital cellular components such as grana thylakoids (GT), starch granules (SG), and the nucleolus. However, the application of nZn at a concentration of 30 mg L-1 exhibited significant alleviation of As toxicity, resulting in a reduction of As accumulation by 54% in shoots and 62% in roots of rice seedlings. Furthermore, nZn demonstrated the ability to scavenge reactive oxygen species (ROS) like hydrogen peroxide (H2O2) and superoxide anion (O2.-), while significantly promoted the gas exchange parameters, chlorophyll content (SPAD value), fluorescence efficiency (Fv/m) and antioxidant enzyme activities under As-induced stress. These findings highlight the potential of nZn in mitigating the adverse impacts of As contamination in rice plants. However, further research is necessary to fully comprehend the underlying mechanisms responsible for the protective effects of nZn and to determine the optimal conditions for their application in real-world agricultural settings.

Iono-metabolomic guided elucidation of arsenic induced physiological and metabolic dynamics in wheat genotypes

Despite the growing concerns about arsenic (As) toxicity, information on wheat adaptability in such an aggravating environment is limited. Thus, the present investigation based on an iono-metabolomic approach is aimed to decipher the response of wheat genotypes towards As toxicity. Wheat genotypes procured from natural conditions were characterized as high As-contaminated (Shri ram-303 and HD-2967) and low As-contaminated (Malviya-234 and DBW-17) based on ICP-MS As accumulation analysis. Reduced chlorophyll fluorescence attributes, grain yield and quality traits, and low grain nutrient status were accompanied by remarkable grain As accumulation in high As-contaminated genotypes, thus imposing a higher potential cancer risk and hazard quotient. Contrarily, in low As-contaminated genotypes, the richness of Zn, N, Fe, Mn, Na, K, Mg, and Ca could probably have supported less grain As accumulation, imparting better agronomic and grain quality traits. Additionally, from metabolomic analysis (LC-MS/MS and UHPLC), abundances of alanine, aspartate, glutamate, quercetin, isoliquiritigenin, trans-ferrulic, cinnamic, caffeic, and syringic bestow Malviya-234 as the best edible wheat genotype. Further, the multivariate statistical analysis (HCA, PCA, and PLS-DA) revealed certain other key metabolites (rutin, nobletin, myricetin, catechin, and naringenin) based genotypic discrimination that imparts strength to genotypes for better adaptation in harsh conditions. Out of the 5 metabolic pathways ascertained through topological analysis, the two main pathways vital for plant's metabolic adjustments in an As-induced environment were: 1. The alanine, aspartate and glutamate metabolism pathway, and 2. The flavonoid biosynthesis pathway. This is also evident from network analysis, which stipulates amino acid metabolism as a prominent As regulatory factor closely associated with flavonoids and phenolics. Therefore, the present findings are useful for wheat breeding programs to develop As adaptive genotypes that are beneficial for crop improvement and human health.

As(V) adsorption by FeOOH@coal gangue composite from aqueous solution: performance and mechanisms

Arsenic (As) pollution in water poses a significant threat to the ecological environment and human health. Meanwhile, the resource utilisation of coal gangue is of utmost importance in ecologically sustainable development. Thus, the FeOOH@coal gangue composite (FeOOH@CG) was synthesised for As(V) adsorption in this study. The results showed that α-FeOOH, β-FeOOH and Schwertmannite loaded on the surface of FeOOH@CG. Moreover, the adsorption behaviour of As(V) by FeOOH@CG was investigated under different reaction conditions, such as pH, contact time, initial concentration and co-existing anions. The optimum adsorption conditions were as follows: initial As(V) concentration of 60 mg/L, pH of 3.0 and adsorption time of 180-240 h. The adsorption capacity of FeOOH@CG for As(V) was pH-dependent and the maximum adsorption capacity was 185.94 mg/g. The presence of anions (H 2 PO 4 - , HCO 3 - and C l - ) decreased the adsorption efficiency of FeOOH@CG for As(V). The adsorption process of FeOOH@CG for As(V) could be well-described by the pseudo-second-order model and Langmuir model, indicating that the adsorption process mainly depended on chemical adsorption. The thermodynamic analysis suggested that the adsorption was a spontaneous and endothermic process. In addition, according to the analyses of XRD, FTIR and XPS, the dominant mechanisms of As(V) adsorption by FeOOH@CG were electrostatic attraction, complexation and precipitation. In conclusion, FeOOH@CG has great potential as an efficient and environmentally friendly adsorbent for As(V) adsorption from aqueous solution.

Elevated nano-α-Fe2O3 enhances arsenic metabolism and dissolved organic carbon release of Microcystis aeruginosa under a phytate environment

Little information is available on the effects of nano-α-Fe2O3 on arsenic (As) metabolism of algae and potential associated carbon (C) storage in As-contaminated water with dissolved organic phosphorus (DOP) as a phosphorus (P) source. In this study, Microcystis aeruginosa (M. aeruginosa) was used to investigate impacts of nano-α-Fe2O3 on cell growth and As metabolism of algae under a phytate (PA) environment as well as potential associated C storage. Results showed that nano-α-Fe2O3 had a subtle influence on algal cell growth in a PA environment. Herein, algal cell density (OD680) and chlorophyll a (Chla) were inhibited at elevated nano-α-Fe2O3 levels, which simultaneously limited the decrease of Yield. As suggested, the complexation of PA with nano-α-Fe2O3 could alleviate the negative influence on algal cell growth. Furthermore, the elevated nano-α-Fe2O3 increased As methylation in the PA environment due to higher monomethylarsenic (MMA) and dimethylarsenic (DMA) concentrations in the test media. Additionally, microcystins (MCs) in the media changed consistently with UV254, both of which were relatively lower at 10.0 mg·L-1 nano-α-Fe2O3. Enhanced As(V) methylation of algal cells was found to simultaneously reduce the release risk of As(III) and MC while increasing dissolved organic carbon (DOC) content in media, suggesting unfavorable C storage. Three-dimensional fluorescence analysis revealed that the main DOC constituent was the tryptophan-like component in aromatic proteins. Correlation analysis showed that decreases in pH and the zeta potential and an increase in Chla may lead to metabolic As improvements in M. aeruginosa. The obtained findings highlight the need for greater focus on the potential risks of DOP combined with nano-α-Fe2O3 on algal blooms as well as the biogeochemical cycling processes of As and C storage in As-contaminated water with DOP as the P source.

Human health risks associated with metals in paddy plant (Oryza sativa) based on target hazard quotient and target cancer risk

Paddy plants (Oryza sativa) contaminated with metals could be detrimental to human health if the concentrations of metals exceed the permissible limit. Thus, this study aims to assess the risk of the concentrations of As, Se, Cu, Cr, Co, and Ni and their distributions in various parts (roots, stems, leaves, and grains) of paddy plants collected from Sekinchan, Malaysia. Both soil and plant samples were digested according to the United States Environmental Protection Agency (USEPA) Method 3050B and the metal concentrations were determined by the Inductively Coupled Plasma-Mass Spectrometry (ICP-MS). The highest mean translocation factor (TF) was from soil to roots (TF roots/soil ranged from 0.12 to 6.15) and the lowest was from leaves to grain (TF grain/leaves ranged from 0.06 to 0.87). Meanwhile, the bioaccumulation factor (BAF) for all metals was less than 1.0 indicating that paddy plants only absorb metals from the soil but do not accumulate in the grains. The average daily intake for As (1.15 ± 0.25 µg/kg/day) has exceeded the limit proposed by ATSDR and IRIS USEPA (0.30 µg/kg/day). Target cancer risk (TR) of 1.10 × 10^-3 for As through rice consumption indicates that the potential cancer risk exists in one out of 1000 exposed individuals. The results from this study could serve as a reference for researchers and policymakers to monitor and formulate strategies in managing As and other metals in paddy plants, especially in Southeast Asian countries.

Negative Impacts of Arsenic on Plants and Mitigation Strategies

Arsenic (As) is a metalloid prevalent mainly in soil and water. The presence of As above permissible levels becomes toxic and detrimental to living organisms, therefore, making it a significant global concern. Humans can absorb As through drinking polluted water and consuming As-contaminated food material grown in soil having As problems. Since human beings are mobile organisms, they can use clean uncontaminated water and food found through various channels or switch from an As-contaminated area to a clean area; but plants are sessile and obtain As along with essential minerals and water through roots that make them more susceptible to arsenic poisoning and consequent stress. Arsenic and phosphorus have many similarities in terms of their physical and chemical characteristics, and they commonly compete to cause physiological anomalies in biological systems that contribute to further stress. Initial indicators of arsenic's propensity to induce toxicity in plants are a decrease in yield and a loss in plant biomass. This is accompanied by considerable physiological alterations; including instant oxidative surge; followed by essential biomolecule oxidation. These variables ultimately result in cell permeability and an electrolyte imbalance. In addition, arsenic disturbs the nucleic acids, the transcription process, and the essential enzymes engaged with the plant system's primary metabolic pathways. To lessen As absorption by plants, a variety of mitigation strategies have been proposed which include agronomic practices, plant breeding, genetic manipulation, computer-aided modeling, biochemical techniques, and the altering of human approaches regarding consumption and pollution, and in these ways, increased awareness may be generated. These mitigation strategies will further help in ensuring good health, food security, and environmental sustainability. This article summarises the nature of the impact of arsenic on plants, the physio-biochemical mechanisms evolved to cope with As stress, and the mitigation measures that can be employed to eliminate the negative effects of As.

The changes in the physicochemical properties of calcareous soils and the factors of arsenic (As) uptake by wheat were investigated after the cessation of effluent irrigation for nearly 20 years

It is not known what the buffering capacity of soils and arsenic (As) enrichment by crops is for calcareous agricultural soils after the end of long-term effluent irrigation. In this study, changes in soil physicochemical properties and factors of influencing As uptake by wheat were investigated in agricultural soils where sewage irrigation had been ceased for nearly 20 years. The results showed that the content of CaCO₃ and pH in soil increased compared to the period before the cessation of sewage irrigation, but remained below the soil background value. Furthermore, CaCO₃ is by far the main buffering substance in agricultural soils and indirectly contributes to the increase in pH. The As concentration in the soil was 36.4 ± 34.8 mg/kg, which was 0.56-10.28 times and 0.28-5.18 times higher than the soil background and risk screening values, respectively, but showed a decreasing trend. pH and Fe dissolution were the main reasons for the lower As concentration in the soil. Total As in soil was a better predictor of As in wheat, and soil electrical conductivity (EC) and soil organic matter (SOM) promoted As uptake by wheat. The competitive uptake of As by dissolved Si was an important reason for the mismatch between As concentrations in soil and wheat. This study highlighted the key issues of As transport transformation in soil-wheat systems after cessation of effluent irrigation, using agricultural soils, and provided a reference for soil risk management in agricultural soils in mining areas.

Exogenous plant hormones alleviate As stress by regulating antioxidant defense system in Oryza sativa L

Plant hormones play essential roles in plant growth regulation and resistance to environmental pressure. A hydroponic experiment was conducted using Zhongjiazao 17 rice to explore the effects of exogenous plant hormones on antioxidant response and As accumulation in rice under As stress. Melatonin (MT), 2,4-epibrassinolide (EBL), and jasmonic acid (JA) reduced the As content in seedlings significantly by 13.4% (MT)-32.5% (EBL) under 5 µM As stress. Three hormones increased superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities, and glutathione (GSH) content significantly (2.2%-82.9%) in 5 µM As stress condition, whereas the levels of H₂O₂ and malondialdehyde (MDA) were reduced significantly (32.3%-78.1%). Plant hormone addition reduced the As content in seedlings significantly by 18.2% (JA)-33.3% (MT) under 25 µM As stress. SOD, POD, and CAT activities and GSH content in seedlings increased significantly (5.6-90.4%) with three hormones addition in 25 µM As stress, whereas the levels of H₂O₂, O₂˙¯, and MDA reduced significantly (20.9-73.0%). Staining with 2',7'-dichlorodihydrofluorescein diacetate and nitroblue tetrazolium showed that green fluorescence and blue spots decreased gradually in hormone-treated seedlings, further confirming that the exogenous addition of hormones weakened the oxidative stress of As to seedlings. Oxidative damage by As stress was reduced more by EBL than by the other hormones MT or JA. Totally, exogenous plant hormone can alleviate As stress in rice by activating enzyme activity of antioxidant defense system and scavenging reactive oxygen species, thus reducing oxidative damage and As accumulation in rice seedlings.

Identification of arsenic-tolerant varieties and candidate genes of tolerance in spring wheat (Triticum aestivum L.)

Despite the growing concerns about arsenic toxicity, information on tolerance and responsible genetic factors in wheat remains elusive. To address that, the present study aimed to screen the wheat varieties against arsenic based on growth parameters, yield, grain accumulation, and associated genes. A total of 110 wheat varieties were grown in arsenic-contaminated regions to record physio-morphological traits. The wheat 90K Infinium iSelect SNP array was used for the genome-wide association model to identify genomic regions. Wheat varieties such as Punjab-81, AARI-11, and Daman showed arsenic concentrations >45 μg/kg in similar conditions as well as the impact on grain yield, chlorophyll, Thousand Kernel Weight, and plant height. Contrastingly, varieties like Kohistan-97, As-2002, Barani-70, and Pari-73 showed grain concentrations <5 μg/kg grown under highly contaminated conditions. Three significant loci associated with arsenic accumulation in grain were identified on chromosomes 6A (qASG1-6A) and 6B (qASG3-6B and qASG4-6B). Annotation at these loci identified 39 wheat genes among which several were important for growth and tolerance against stress. The candidate gene (TraesCS6B02G429400) responsible for Glutathione-S-transferase was identified in the present study and must be investigated further using a transcriptomic approach. The present study provided background information for breeding prospects to improve wheat yield and tolerance against arsenic.

Influence of irrigation methods on arsenic speciation in rice grain

Although the bioaccumulation of arsenic (As) in rice grains is a global health issue, its speciation is not less worrying. Despite the ascertained effectiveness of the intermittent irrigation methods in minimizing the amount of total As in rice, knowledge of its influence on the As speciation has been insufficient so far. Hence, this contribution was aimed to measure the concentrations of As(III), As(V), dimethylarsinic acid (DMA), and monomethylarsonic acid (MMA) in grains from twenty-six different rice genotypes irrigated either with continuous flooding (CF), periodic saturation (SA) or sprinkler irrigation (SP). In CF-irrigated rice, As(III) and DMA prevailed in roughly equal amounts, only As(III) was found in SA-irrigated rice, whereas As(V) was largely predominant on As(III) in SP-irrigated rice. Organoarsenic species were below the limits of detection (LoD) in rice irrigated by intermittent methods. Principal component analysis (PCA) explained the influence of the irrigation method on the total amount of As, its chemical species, and their correlation. Furthermore, PCA showed also significant differences in As speciation as a function of the rice genotype, whereas no differences were found among Indica and Japonica subspecies.

Field experiments for evaluating the effects of water management and phosphate application on inorganic arsenic accumulation in water spinach (Ipomoea aquatica Forssk.)

Water spinach (Ipomoea aquatica Forssk.) is a commonly planted vegetable in the Southeast Asia; it is a semi-aquatic leafy vegetable with high inorganic arsenic (As) accumulation capability and can be planted under both upland and flooding cultivation conditions. To date, a limited number of field studies have investigated the effect of soil management on As phytotoxicity and accumulation of water spinach. Therefore, in this study, a field experiment was conducted to investigate the effects of water management and phosphate (P) application on the As phytotoxicity and accumulation of water spinach grown in As-contaminated fields (121 mg As kg^-1). Water spinach was planted in the study field with two water management (flooding and upland cultivation) and two P application rates (90 and 180 kg P₂O₅ ha^-1), and continuously harvested three times. Results reveal that the concentration and estimated daily intake (EDI) of inorganic As in the edible parts of water spinach under flooding cultivation were approximately twofold higher than those under upland cultivation. It was also found that the accumulation of As in the shoot of water spinach was strongly related to the As concentrations, rather than P/As molar ratio in pore water due to that P application rates were lower than the maximum capacity for P retention of the tested soil. Moreover, the As phytotoxicity and accumulation of water spinach were reduced at the third harvest relative to the first two harvests because of the increase in iron plaque formation on the root surface and the decrease in the growing temperature during the experimental period. Our results suggest that upland cultivation is the better practice than flooding cultivation for reducing inorganic As accumulation in the edible parts of water spinach grown in As-contaminated soils. Further, ratooning may be a feasible cultivation approach to reducing inorganic As accumulation in water spinach.

Genetic Approaches for Iron and Zinc Biofortification and Arsenic Decrease in Oryza sativa L. Grains

Rice is the staple diet to half of the world's population, being a major source of carbohydrates, vitamins, and some essential elements. However, rice naturally contains low amounts of essential minerals such as iron (Fe) and zinc (Zn), which are drastically decreased after milling. Thus, populations that consume mostly rice may have micronutrient deficiency, which is associated with different diseases. On the other hand, rice irrigated by flooding has a high ability to accumulate arsenic (As) in the grain. Therefore, when rice is grown in areas with contaminated soil or irrigation water, it represents a risk factor for consumers, since As is associated with cancer and other diseases. Different strategies have been used to mitigate micronutrient deficiencies such as Fe and Zn and to prevent As from entering the food chain. Each strategy has its positive and its negative sides. The development of genetically biofortified rice plants with Fe and Zn and with low As accumulation is one of the most promising strategies, since it does not represent an additional cost for farmers, and gives benefits to consumers as well. Considering the importance of genetic improvement (traditional or molecular) to decrease the impact of micronutrient deficiencies such as Fe and Zn and contamination with As, this review aimed to summarize the major efforts, advances, and challenges for genetic biofortification of Fe and Zn and decrease in As content in rice grains.

Selenium alleviates physiological traits, nutrient uptake and nitrogen metabolism in rice under arsenate stress

A green house experiment was conducted to evaluate the efficacy of soil application of selenium (Se) in modulating metabolic changes in rice under arsenic (As) stress. Rice plants were grown over soil amended with sodium arsenate (25, 50 and 100 μM kg^-1 soil) with or without sodium selenate @ 0.5 and 1 mg kg^-1 soil in a complete randomized experimental design, and photosynthetic efficiency, nutrient uptake and nitrogen metabolism in rice leaves were estimated at tillering and grain filling stages. Se treatments significantly improved the toxic effects of As on plant height, leaf dry weight and grain yield. Arsenate treatment reduced uptake of Na, Mg, P, K, Ca, Mn, Fe and Zn and lowered chlorophyll, carotenoids and activities of enzymes of nitrogen metabolism (nitrate reductase, nitrite reductase, glutamine synthase and glutamate synthase) in rice leaves at both the stages in a dose-dependent fashion. Se application along with As improved photosynthesis, nutrient uptake and arsenate-induced effects on activities of enzymes of nitrogen metabolism with maximum impact shown by As50 + Se1 combination. Application of Se can modulate photosynthetic efficiency, nutrient uptake and alterations in nitrogen metabolism in rice Cv PR126 due to As stress that helped plants to adapt to excess As and resulted in improved plant growth.

An In Vitro and In Silico Perspective Study of Seed Priming with Zinc on the Phytotoxicity and Accumulation Pattern of Arsenic in Rice Seedlings

Arsenic (As) contamination of the rice agro-ecosystem is a major concern for rice farmers of South East Asia as it imposes a serious threat to human and animal life; thus, there is an unrelenting need to explore the ways by which arsenic stress mitigation could be achieved. In the present investigation, we explore the effect of zinc (Zn²⁺) supplementation using the seed priming technique for the mitigation of As-induced stress responses in developing rice seedlings. In addition to the physiological and biochemical attributes, we also studied the interactive effect of Zn²⁺ in regulating As-induced changes by targeting antioxidant enzymes using a computational approach. Our findings suggest that Zn²⁺ and As can effectively modulate redox homeostasis by limiting ROS production and thereby confer protection against oxidative stress. The results also show that As had a significant impact on seedling growth, which was restored by Zn²⁺ and also minimized the As uptake. A remarkable outcome of the present investigation is that the varietal difference was significant in determining the efficacy of the Zn²⁺ priming. Further, based on the findings of computational studies, we observed differences in the surface overlap of the antioxidant target enzymes of rice, indicating that the Zn²⁺ might have foiled the interaction of As with the enzymes. This is undoubtedly a fascinating approach that interprets the mode of action of the antioxidative enzymes under the metal/metalloid-tempted stress condition in rice by pointing at designated targets. The results of the current investigation are rationally significant and may be the pioneering beginning of an exciting and useful method of integrating physiological and biochemical analysis together with a computational modelling approach for evaluating the stress modulating effects of Zn²⁺ seed priming on As-induced responses in developing rice seedlings.

Effect of foliage applied chitosan-based silicon nanoparticles on arsenic uptake and translocation in rice (Oryza sativa L.)

In this study, chitosan-based silicon nanoparticles (Chsi-NPs) are prepared that primarily consists of C (57.9%), O (31.3%), N (5.6%), and Si (3.5%) and are 10-180 nm in size. We then explore the effect on the foliage applied on rice planted on soil contaminated with 104 mg·kg^-1 arsenic (As); low (3 mg·L^-1)and high (15 mg·L^-1) doses of the foliar Chsi-NPs are administered during the rice grain filling stage. The results showed that the higher dose foliar Chsi-NPs treatment reduced the As concentration in the grain by 61.2% but increased As concentration in the leaves by 47.1% compared to the control treatment. The foliar spraying of the Chsi-NPs inhibited As transport to the grain by facilitating the attachment of As to the cell wall, with higher doses of the foliar Chsi-NPs treatment increased by 8.7%. The foliar spraying of Chsi-NPs increased the malondialdehyde levels by 18.4%, the catalase activity by 49.0%, and the glutathione activity by 99.0%. These results indicated that the foliar Chsi-NPs application was effective for alleviating As toxicity and accumulation in rice. This study provides a novel method for effectively alleviating As accumulation in rice.

Antioxidants as modulators of arsenic-induced oxidative stress tolerance in plants: An overview

Arsenic (As) is a highly toxic contaminant in the environment. Although both inorganic and organic types of arsenic exist in the environment, the most common inorganic forms of As that adversely affect plants are arsenite (As III) and arsenate (As V). Despite no evidence for As being essential for plant growth, exposure of roots to this element can cause its uptake primarily via transporters responsible for the transport of essential mineral nutrients. Arsenic exposure even at low concentrations disturbs the plant normal functioning via excessive generation of reactive oxygen species, a condition known as oxidative stress leading to an imbalance in the redox system of the plant. This is associated with considerable damage to the cell components thereby impairing normal cellular functions and activation of several cell survival and cell death pathways. To counteract this oxidative disorder, plants possess natural defense mechanisms such as chemical species and enzymatic antioxidants. This review considers how different types of antioxidants participate in the oxidative defense mechanism to alleviate As stress in plants. Since the underlying phenomena of oxidative stress tolerance are not yet fully elucidated, the potential for "Omics" technologies to uncover molecular mechanisms are discussed. Various strategies to improve As-induced oxidative tolerance in plants such as exogenous supplementation of effective growth regulators, protectant chemicals, transgenic approaches, and genome editing are also discussed thoroughly in this review.

Endophytic fungus Serendipita indica reduces arsenic mobilization from root to fruit in colonized tomato plant

The accumulation of arsenic in crop plants has become a worldwide concern that affects millions of people. The major source of arsenic in crop plants is irrigation water and soil. In this study, Serendipita indica, an endophytic fungus, was used to investigate the protection against arsenic and its accumulation in the tomato plant. We found that inoculation of S. indica recovers seed germination, plant growth and improves overall plant health under arsenic stress. A hyper-colonization of fungus in the plant root was observed under arsenic stress, which results in reduced oxidative stress via modulation of antioxidative enzymes, glutathione, and proline levels. Furthermore, fungal colonization restricts arsenic mobilization from root to shoot and fruit by accumulating it exclusively in the root. We observed that fungal colonization enhances the arsenic bioaccumulation factor 1.48 times in root and reduces the arsenic translocation factor by 2.96 times from root to shoot and 13.6 times from root to fruit compared to non colonized plants. Further, investigation suggests that S. indica can tolerate arsenic by immobilizing it on the cell wall and accumulating it in the vacuole. This study shows that S. indica may be helpful for the reduction of arsenic accumulation in crops grown in arsenic-contaminated agriculture fields.

Transforming approach for assessing the performance and applicability of rice arsenic contamination forecasting models based on regression and probability methods

Probability models are preferred over regression models recently in contamination evaluation but lacking proper performance comparison between two model types. Linear regression, logistic regression, XGBoost-based regression, and probability models were built considering soil arsenic and certain soil physicochemical properties of 287 samples to predict arsenic in rice grains. The outputs of all models were binarily classified uniformly for comparison. The complex algorithm-based models--XGBoost-based regression (R² =0.046 ± 0.036) and probability models (cross-entropy = 0.697 ± 0.020)-did not surpass the simple linear regression (R² =0.046 ± 0.031) and logistic regression models (cross-entropy = 0.694 ± 0.021). Accuracy, sensitivity, specificity, precision, and F1 score showed that the probability models exhibit no advantage on regression models, although the indicators above did not serve as proper scoring rules for the probability model. When discretizing the contaminant concentration in grains for probabilistic modeling, the limit concentration was considered as the splitting point but not the structure of the datasets, which would reduce the inherent advantage of the probability model. When predicting the contamination of crops, the probability model cannot eliminate the regression model, and simple but robust algorithm-based models are preferred when the quality and quantity of the dataset are undesirable.

Brassinosteroids and metalloids: Regulation of plant biology

Metalloid contamination in the environment is one of the serious concerns posing threat to our ecosystems. Excess of metalloid concentrations (including antimony, arsenic, boron, selenium etc.) in soil results in their over accumulation in plant tissues, which ultimately causes phytotoxicity and their bio-magnification. So, it is very important to find some ecofriendly approaches to counter negative impacts of above mentioned metalloids on plant system. Brassinosteroids (BRs) belong to family of plant steroidal hormones, and are considered as one of the ecofriendly way to counter metalloid phytotoxicity. This phytohormone regulates the plant biology in presence of metalloids by modulating various key biological processes like cell signaling, primary and secondary metabolism, bio-molecule crosstalk and redox homeostasis. The present review explains the in-depth mechanisms of BR regulated plant responses in presence of metalloids, and provides some biotechnological aspects towards ecofriendly management of metalloid contamination.

Empirical Evidence of Arsenite Oxidase Gene as an Indicator Accounting for Arsenic Phytoextraction by Pteris vittata

Arsenic (As) is a toxic semi-metallic element that is ubiquitous in the environment and poses serious human health risks. Phytoextraction by Pteris vittata is considered a low-cost and environmentally friendly approach to treat As-contaminated soil. P. vittata mainly absorbs arsenate thus the bioavailability of As to P. vittata depends on the chemical form of As. Microbial redox of As contributes to the biogeochemical cycling of As, and rhizobacterium-assisted phytoextraction by P. vittata was proposed. In this study, this microbe-assisted phytoextraction was applied to two fields, and the effectiveness of phytoextraction was evaluated. The results revealed that P. vittata was able to grow in temperate and subarctic climate zones. The biomass was influenced by the weather, and the As concentration in plants was dependent on the As content in the soil. The ratio of arsenite oxidase genes (aioA-like genes) to 16S rRNA genes was employed to evaluate the effect of As phytoextraction, and the results exhibited that the ratio was related to the As concentration in P. vittata. Our results showed that arsenite oxidation in the rhizosphere might not be achieved by single-strain inoculation, while this study provided empirical evidence that the rhizospheric aioA-like genes could be an indicator for evaluating the effectiveness of As phytoextraction.

Using an improved Si-rich husk ash to decrease inorganic arsenic in rice grain

Paddy rice is efficient at arsenite accumulation by sharing the uptake and transport pathway for silicic acid. To limit As entry into rice by increasing soil Si availability, rice husk with concentrated Si deposition was subject to an ethanol-aided open combustion in this work to promote Si release from organic matrix. Compared to original husk, the content of amorphous silica was almost tripled in the resultant ash (Si-ash) with an apparent elimination of hydrocarbon groups. Following its incorporation into soil, 3.4-fold higher Si dissolution was maintained in rice rhizosphere compared to control, which was accompanied by 15.9-40.5% decrease in porewater As from tillering to harvest. Correspondingly, As sequestration in soil solid phase and root plaque increased by 8.0% and 26.9% with Si-ash, which could result from promoted FeAs co-precipitation by the liming effect of Si-ash and was linked to a notable decline in As transport through node I. Consequently, inorganic As (iAs) in white rice decreased from 0.36 mg kg^-1 in control to 0.17 mg kg^-1 with Si-ash, which is 15% lower than Chinese food safety standard. Results from this study highlight the advantage of Si-ash in securing rice production by mitigating iAs accumulation in white rice with fortified Si nutrition.

Arsenic contamination, impact and mitigation strategies in rice agro-environment: An inclusive insight

Arsenic (As) contamination and its adverse consequences on rice agroecosystem are well known. Rice has the credit to feed more than 50% of the world population but concurrently, rice accumulates a substantial amount of As, thereby compromising food security. The gravity of the situation lays in the fact that the population in theAs uncontaminated areas may be accidentally exposed to toxic levels of As from rice consumption. In this review, we are trying to summarize the documents on the impact of As contamination and phytotoxicity in past two decades. The unique feature of this attempt is wide spectrum coverages of topics, and that makes it truly an interdisciplinary review. Aprat from the behaviour of As in rice field soil, we have documented the cellular and molecular response of rice plant upon exposure to As. The potential of various mitigation strategies with particular emphasis on using biochar, seed priming technology, irrigation management, transgenic variety development and other agronomic methods have been critically explored. The review attempts to give a comprehensive and multidiciplinary insight into the behaviour of As in Paddy -Water - Soil - Plate prospective from molecular to post-harvest phase. From the comprehensive literature review, we may conclude that considerable emphasis on rice grain, nutritional and anti-nutritional components, and grain quality traits under arsenic stress condition is yet to be given. Besides these, some emerging mitigation options like seed priming technology, adoption of nanotechnological strategies, applications of biochar should be fortified in large scale without interfering with the proper use of biodiversity.

Arsenic transport and interaction with plant metabolism: Clues for improving agricultural productivity and food safety

Arsenic (As) is a ubiquitous metalloid that is highly toxic to all living organisms. When grown in As-contaminated soils, plants may accumulate significant amounts of As in the grains or edible shoot parts which then enter a food chain. Plant growth and development per se are also both affected by arsenic. These effects are traditionally attributed to As-induced accumulation of reactive oxygen species (ROS) and a consequent lipid peroxidation and damage to cellular membranes. However, this view is oversimplified, as As exposure have a major impact on many metabolic processes in plants, including availability of essential nutrients, photosynthesis, carbohydrate metabolism, lipid metabolism, protein metabolism, and sulfur metabolism. This review is aimed to fill this gap in the knowledge. In addition, the molecular basis of arsenic uptake and transport in plants and prospects of creating low As-accumulating crop species, for both agricultural productivity and food safety, are discussed.

Distribution of arsenic species and pathological characteristics of tissues of the mice fed with arsenic-supplemented food simulating rice

The exposure and harm of arsenic have attracted wide attention. Rice is an arsenic-rich crop. The purpose of this study was to learn the distribution of arsenic species and the pathological changes in tissues of mice exposed to arsenic-supplemented food simulating rice. Test groups of mice were orally exposed with prepared arsenic feeds supplemented with four arsenic species (arsenite iAs^III, arsenate iAs^V, monomethylarsonate MMA, and dimethylarsinate DMA) at three doses (total As concentration: 0.91, 9.1 and 30 μg/g), which simulated the arsenic species ratio in rice. After 112 days, the concentrations of the arsenic species in the spleen, thymus, heart, skin and hair were detected, and histopathology of the spleen, heart and skin was observed. Each arsenic species was detected and their total concentration increased in a dose-dependent manner with a few exceptions. One interesting phenomenon is that ratio of the organic arsenic to inorganic arsenic also increased in a dose-dependent manner. For the other, the order of tissues from high to low arsenic concentration was the same in the medium- and high-dose groups. The histopathological sections of the spleen, heart and skin showed dose-dependent debilitating alterations in tissue architecture. Hyperplasia, hyaline degeneration and sclerosis of fibrous connective tissue occurred in the spleen. Myocardial cell atrophy and interstitial edema occurred in the heart. Hyperpigmentation, hyperkeratosis and atypia of basal cells occurred in the skin. In summary, the long-term intake of high arsenic rice has a health risk. Further studies are needed to assess it.

Comparative physiological and transcriptomic analyses illuminate common mechanisms by which silicon alleviates cadmium and arsenic toxicity in rice seedlings

The inessential heavy metal/loids cadmium (Cd) and arsenic (As), which often co-occur in polluted paddy soils, are toxic to rice. Silicon (Si) treatment is known to reduce Cd and As toxicity in rice plants. To better understand the shared mechanisms by which Si alleviates Cd and As stress, rice seedlings were hydroponically exposed to Cd or As, then treated with Si. The addition of Si significantly ameliorated the inhibitory effects of Cd and As on rice seedling growth. Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings. Transcriptomics analyses were conducted to elucidate molecular mechanisms underlying the Si-mediated response to Cd or As stress in rice. The expression patterns of the differentially expressed genes in Cd- or As-stressed rice roots with and without Si application were compared. The transcriptomes of the Cd- and As-stressed rice roots were similarly and profoundly reshaped by Si application, suggesting that Si may play a fundamental, active role in plant defense against heavy metal/loid stresses by modulating whole genome expression. We also identified two novel genes, Os01g0524500 and Os06g0514800, encoding a myeloblastosis (MYB) transcription factor and a thionin, respectively, which may be candidate targets for Si to alleviate Cd and As stress in rice, as well as for the generation of Cd- and/or As-resistant plants. This study provides valuable resources for further clarification of the shared molecular mechanisms underlying the Si-mediated alleviation of Cd and As toxicity in rice.

Identification of Promising Genotypes Through Systematic Evaluation for Arsenic Tolerance and Exclusion in Rice (Oryza sativa L.)

Rice remains a major staple food source for the rapidly growing world population. However, regular occurrences of carcinogenic arsenic (As) minerals in waterlogged paddy topsoil pose a great threat to rice production and consumers across the globe. Although As contamination in rice has been well recognized over the past two decades, no suitable rice germplasm had been identified to exploit in adaptive breeding programs. Therefore, this current study identified suitable rice germplasm for As tolerance and exclusion based on a variety of traits and investigated the interlinkages of favorable traits during different growth stages. Fifty-three different genotypes were systematically evaluated for As tolerance and accumulation. A germination screening assay was carried out to identify the ability of individual germplasm to germinate under varying As stress. Seedling-stage screening was conducted in hydroponics under varying As stress to identify tolerant and excluder genotypes, and a field experiment was carried out to identify genotypes accumulating less As in grain. Irrespective of the rice genotypes, plant health declined significantly with increasing As in the treatment. However, genotype-dependent variation in germination, tolerance, and As accumulation was observed among the genotypes. Some genotypes (WTR1-BRRI dhan69, NPT-IR68552-55-3-2, OM997, and GSR IR1-5-Y4-S1-Y1) showed high tolerance by excluding As in the shoot system. Arsenic content in grain ranged from 0.12 mg kg-1 in Huang-Hua-Zhan (indica) from China to 0.48 mg kg-1 in IRAT 109 (japonica) from Brazil. This current study provides novel insights into the performance of rice genotypes under varying As stress during different growth stages for further use in ongoing breeding programs for the development of As-excluding rice varieties for As-polluted environments.

Nanoscale Sulfur Improves Plant Growth and Reduces Arsenic Toxicity and Accumulation in Rice (Oryza sativa L.)

Rice is known to accumulate arsenic (As) in its grains, posing serious health concerns for billions of people globally. We studied the effect of nanoscale sulfur (NS) on rice seedlings and mature plants under As stress. NS application caused a 40% increase in seedling biomass and a 26% increase in seed yield of mature plants compared to untreated control plants. AsIII exposure caused severe toxicity to rice; however, coexposure of plants to AsIII and NS alleviated As toxicity, and growth was significantly improved. Rice seedlings treated with AsIII + NS produced 159 and 248% more shoot and root biomass, respectively, compared to plants exposed to AsIII alone. Further, AsIII + NS-treated seedlings accumulated 32 and 11% less As in root and shoot tissues, respectively, than the AsIII-alone treatment. Mature plants treated with AsIII + NS produced 76, 110, and 108% more dry shoot biomass, seed number, and seed yield, respectively, and accumulated 69, 38, 18, and 54% less total As in the root, shoot, flag leaves, and grains, respectively, compared to AsIII-alone-treated plants. A similar trend was observed in seedlings treated with AsV and NS. The ability of sulfur (S) to alleviate As toxicity and accumulation is clearly size dependent as NS could effectively reduce bioavailability and accumulation of As in rice via modulating the gene expression activity of As transport, S assimilatory, and glutathione synthesis pathways to facilitate AsIII detoxification. These results have significant environmental implications as NS application in agriculture has the potential to decrease As in the food chain and simultaneously enable crops to grow and produce higher yields on marginal and contaminated lands.

Arsenic behavior in soil-plant system and its detoxification mechanisms in plants: A review

Arsenic (As) is one of the most toxic and cancer-causing metals which is generally entered the food chain via intake of As contaminated water or food and harmed the life of living things especially human beings. Therefore, the reduction of As content in the food could be of great importance for healthy life. To reduce As contamination in the soil and food, the evaluation of plant-based As uptake and transportation mechanisms is critically needed. Different soil factors such as physical and chemical properties of soil, soil pH, As speciation, microbial abundance, soil phosphates, mineral nutrients, iron plaques and roots exudates effectively regulate the uptake and accumulation of As in different parts of plants. The detoxification mechanisms of As in plants depend upon aquaporins, membrane channels and different transporters that actively control the influx and efflux of As inside and outside of plant cells, respectively. The xylem loading is responsible for long-distance translocation of As and phloem loading involves in the partitioning of As into the grains. However, As detoxification mechanism based on the clear understandings of how As uptake, accumulations and translocation occur inside the plants and which factors participate to regulate these processes. Thus, in this review we emphasized the different soil factors and plant cell transporters that are critically responsible for As uptake, accumulation, translocation to different organs of plants to clearly understand the toxicity reasons in plants. This study could be helpful for further research to develop such strategies that may restrict As entry into plant cells and lead to high crop yield and safe food production.

Iron modification to silicon-rich biochar and alternative water management to decrease arsenic accumulation in rice (Oryza sativa L.)

Production of rice grains at non-toxic levels of arsenic (As) to meet the demands of an ever-increasing population is a global challenge. There is currently a lack of investigation into integrated approaches for decreasing As levels in rice agro-ecosystems. By examining the integrated iron-modified rice hull biochar (Fe-RBC) and water management approaches on As dynamics in the paddy agro-ecosystem, this study aims to reduce As accumulation in rice grains. The rice cultivar, Ishikari, was grown and irrigated with As-containing water (1 mg L^-1 of As(V)), under the following treatments: (1) Fe-RBC-flooded water management, (2) Fe-RBC-intermittent water management, (3) conventional flooded water management, and (4) intermittent water management. Compared to the conventional flooded water management, grain weight per pot and Fe and Si concentrations in the paddy pore water under Fe-RBC-intermittent and Fe-RBC-flooded treatments increased by 24%-39%, 100%-142%, and 93%-184%, respectively. The supplementation of Fe-RBC decreased the As/Fe ratio and the abundance of Fe(III) reducing bacteria (i.e. Bacillus, Clostridium, Geobacter, and Anaeromyxobacter) by 57%-88% and 24%-64%, respectively, in Fe-RBC-flooded and Fe-RBC-intermittent treatments compared to the conventional flooded treatment. Most importantly, Fe-RBC-intermittent treatment significantly (p ≤ 0.05) decreased As accumulation in rice roots, shoots, husks, and unpolished rice grains by 62%, 37%, 79%, and 59%, respectively, compared to the conventional flooded treatment. Overall, integrated Fe-RBC-intermittent treatment could be proposed for As endemic areas to produce rice grains with safer As levels, while sustaining rice yields to meet the demands of growing populations.

Fate of arsenic in living systems: Implications for sustainable and safe food chains

Arsenic, a group 1 carcinogen for humans, is abundant as compared to other trace elements in the environment and is present mainly in the Earth's crust and soil. The arsenic distributions in different geographical regions are dependent on their geological histories. Anthropogenic activities also contribute significantly to arsenic release into the environment. Arsenic presents several complications to humans, animals, and plants. The physiology of plants and their growth and development are affected by arsenic. Arsenic is known to cause cancer and several types of organ toxicity, such as cardiotoxicity, nephrotoxicity, and hepatotoxicity. In the environment, arsenic exists in variable forms both as inorganic and organic species. From arsenic containing compartments, plants can absorb and accumulate arsenic. Crops grown on these contaminated soils pose several-fold higher toxicity to humans compared with drinking water if arsenic enters the food chain. Information regarding arsenic transfer at different trophic levels in food chains has not been summarized until now. The present review focuses on the food chain perspective of arsenic, which affects all components of the food chain during its course. The circumstances that facilitate arsenic accumulation in flora and fauna, as components of the food chain, are outlined in this review.

Physiological responses, tolerance, and remediation strategies in plants exposed to metalloids

Metalloids are a subset of particular concern to risk assessors and toxicologists because of their well-documented potential hazards to plant system. Most of the metalloids are major environmental contaminants which affect crop productivity when present in high concentrations in soil. Metalloids are coupled with carrier proteins of the plasma membrane and translocated to various organs causing changes in key metabolic processes, damages cell biomolecules, and finally inhibit its growth. Phytoremediation-based approaches help in understanding the molecular and biochemical mechanisms for prerequisite recombinant genetic approaches. Recent advancements in proteomics and plant genomics help in understanding the role of transcription factors, metabolites, and genes in plant system which confers metal tolerance. The present review summarizes our current status of knowledge in this direction related to various physiological responses, detoxification mechanisms, and remediation strategies of metalloids in crop plants in relation to plant-metalloid tolerance. Further, the role of various transcription factors and miRNAs in conferring metal tolerance is also briefed. Hence, the present review mainly focused on the alterations in the physiological activities of plants due to metalloid toxicity and the various mechanisms which get activated inside the plants to mitigate their toxic effects.

Uptake, transport, and metabolism of selenium and its protective effects against toxic metals in plants: a review

Selenium (Se) is an essential trace element of fundamental importance to humans, animals, and plants. However, the uptake, transport, and metabolic processes of Se and its underlying mechanisms in plants have not been well characterized. Here, we review our current understanding of the adsorption and assimilation of Se in plants. First, we discussed the conversion of Se from inorganic Se into organic forms, the mechanisms underlying the formation of seleno-amino acids, and the detoxification of Se. We then discussed the ways in which Se protects plants against toxic metal ions in the environment, such as by alleviating oxidative stress, regulating the activity of antioxidant enzymes, sequestering metal ions, and preventing metal ion uptake and accumulation. Generally, this review will aid future research examining the molecular mechanisms underlying the antagonistic relationships between Se and toxic metals in plants.

Arsenic biogeochemical cycling in paddy soil-rice system: Interaction with various factors, amendments and mineral nutrients

Arsenic (As) contamination is a well-recognized environmental and health issue, threatening over 200 million people worldwide with the prime cases in South and Southeast Asian and Latin American countries. Rice is mostly cultivated under flooded paddy soil conditions, where As speciation and accumulation by rice plants is controlled by various geo-environmental (biotic and abiotic) factors. In contrast to other food crops, As uptake in rice has been found to be substantially higher due to the prevalence of highly mobile and toxic As species, arsenite (As(III)), under paddy soil conditions. In this review, we discussed the biogeochemical cycling of As in paddy soil-rice system, described the influence of critical factors such as pH, iron oxides, organic matter, microbial species, and pathways affecting As transformation and accumulation by rice. Moreover, we elucidated As interaction with organic and inorganic amendments and mineral nutrients. The review also elaborates on As (im)mobilization processes and As uptake by rice under the influence of different mineral nutrients and amendments in paddy soil conditions, as well as their role in mitigating As transfer to rice grain. This review article provides critical information on As contamination in paddy soil-rice system, which is important to develop suitable strategies and mitigation programs for limiting As exposure via rice crop, and meet the UN's key Sustainable Development Goals (SDGs: 2 (zero hunger), 3 (good health and well-being), 12 (responsible consumption and production), and 13 (climate action)).

Inorganic arsenic toxicity and alleviation strategies in rice

Direct or indirect exposure to inorganic arsenic (iAs) in the forms of AsIII (arsenite) and AsV (arsenate) through consumption of As-contaminated food materials and drinking water leads to arsenic poisoning. Rice (Oryza sativa L.) plant potentially accumulates a high amount of iAs from paddy fields than any other cereal crops. This makes it to be a major source of iAs especially among the population that uses it as their dominant source of diet. The accumulation of As in human bodies poses a serious global health risk to the human population. Various conventional methods have been applied to reduce the arsenic accumulation in rice plant. However, the success rate of these techniques is low. Therefore, the development of efficient and effective methods aimed at lowering iAs toxicity is a very crucial public concern. With the current advancement in technology, new strategies aimed at addressing this concern are being developed and utilized in various parts of the world. In this review, we discuss the recent advances in the management of iAs in rice plants emphasizing the use of nanotechnology and biotechnology approaches. Also, the prospects and challenges facing these approaches are described.

Assessing human health risk of arsenic for rice consumption by an iron plaque based partition ratio model

A field experiment was conducted to study the transport and uptake of arsenic (As) from soil to rice roots and the subsequent translocation from roots to shoots and grains. Twelve rice cultivars were used in the field experiment. The amount of As accumulated in rice grains and sequestered by root iron plaque and rhizosphere soil, were determined to establish the relationship between As concentrations in brown rice and As sequestration by iron oxides. Human health risk was then assessed for Taiwan's population exposed to As through rice consumption. The result of this study showed that the mean total As concentrations in the experimental site and in brown rice were 93.02 mg/kg and 0.158 mg/kg, respectively. The As sequestration by iron oxides on root plaque (3.48-9.51) was higher than that of the rhizosphere soil (1.86-4.09) for all tested rice cultivars. Therefore, the partition ratio (PR) representing the relative tendency of As sequestration by rhizosphere soil to that in root iron plaque was all less than 1. In addition, there was a significant negative linear relationship between inorganic As concentration (iAs) in brown rice and PR value (r² = 0.38, p < 0.05). Based on the iAs in brown rice, the median value of hazard quotient (HQ) and target cancer risk (TR) was 1.13 and 5.10 × 10^-4, respectively, indicating potential cancer and non-cancer risk for Taiwan residents exposed to As through the consumption of rice grown on the studied site. Various PR values were then successfully used for estimating risk, implying that screening the PR of the rice plant before harvest could serve as an early warning signal for protecting consumers' health. However, more experiments with different rice cultivars for the paddy soils were suggested in the future to establish a comprehensive relationship between iAs in brown rice and PR value.

Reference gene identification for gene expression analysis in rice under different metal stress

Real-time quantitative polymerase chain reaction (RT-qPCR) is the most common approach to quantify changes in gene expression. Appropriate internal reference genes are essential for normalization of data of RT-qPCR. In the present study, we identified suitable reference genes for analysis of gene expression in rice seedlings subjected to different heavy metal stresses such as deficiencies of iron and zinc and toxicities of cobalt, cadmium and nickel. First, from publically available RNA-Seq data we identified 10 candidate genes having stable expression. We also included commonly used house-keeping gene OsUBQ5 (Ubiquitin 5) in our analysis. Expression stability of all the 11 genes was determined by two independent tools, NormFinder and geNorm. Our results show that selected candidate reference genes have higher stability in their expression compared to that of OsUBQ5. Genes with locus ID LOC_Os03g16690, encoding an oxysterol-binding protein (OsOBP) and LOC_Os01g56580, encoding Casein Kinase_1a.3 (OsCK1a.3) were identified to be the most stably expressed reference genes under most of the conditions tested. Finally, the study reveals that it is better to use a specific reference gene for a specific heavy metal stress condition rather than using a common reference gene for multiple heavy metal stress conditions. The reference genes identified here would be very useful for gene expression studies under heavy metal stresses in rice.

Does biochar inhibit the bioavailability and bioaccumulation of As and Cd in co-contaminated soils? A meta-analysis

Biochar, an effective and low-cost amendment for immobilizing heavy metals, has been extensively studied. However, the simultaneous inhibition effects of biochar on the plant uptake for arsenic (As) and cadmium (Cd) in co-contaminated soils are still ambiguous due to their distinct environmental behaviors. A meta-analysis was conducted to quantitatively assess the effects using 1030 individual observations from 52 articles. On average, biochar application significantly decreased the bioavailability of Cd in soils by 50.12%, while slightly increased the bioavailability of As in soils by 2.39%. The more instructive result is that biochar application could also simultaneously reduce the concentration of As and Cd in plants by 25.48% and 38.66%, respectively. The orders of the decreased percentage of As and Cd in various tissues were root < stem< leaf < grain, and root < leaf < stem < grain, respectively. According to the analysis of critical factors, manure biochar, low pyrolysis temperature (at <400 °C), low application rate (<2%), and high SOC (>30 g/kg) were more conducive to reduce the bioaccumulation of As and Cd simultaneously in co-contaminated soils. Pristine and modified biochar could inhibit As and Cd accumulation in crops, but their efficiencies need to be further improved to ensure the safety of crop productions. Overall, the meta-analysis suggests that biochar has the potential to remedy the As and Cd co-contaminated soils.

Arsenic uptake and toxicity in wheat (Triticum aestivum L.): A review of multi-omics approaches to identify tolerance mechanisms

Arsenic (As) due to its widespread has become a primary concern for sustainable food production, especially in Southeast Asian countries. In that context, the present review presented a comprehensive detail of the available literature marking an assortment of As-induced impacts on wheat. The conclusive findings of past research suggest that As tends to grossly affect the germination, elongation, biomass, grain yield, and induce oxidative stress. Several human studies are suggestive of higher cancer risks (>1 × 10^-6) due to the ingestion of wheat grains. However, the body of proof is limited and the scarcity of information limited understanding about tolerance mechanism in wheat against As. Therefore, the paper provided a reference from tolerance mechanism based studies in other crops like rice and maize. The generated knowledge of arsenomics would pave the way for plant breeders to develop resistant varieties for As to ensure sustainable food production.

Main nitric oxide (NO) hallmarks to relieve arsenic stress in higher plants

Arsenic (As) is a toxic metalloid that adversely affects plant growth, and poses severe risks to human health. It induces disturbance to many physiological and metabolic pathways such as nutrient, water and redox imbalance, abnormal photosynthesis and ATP synthesis and loss of membrane integrity. Nitric oxide (NO) is a free radical molecule endogenously generated in plant cells which has signalling properties. Under As-stress, the endogenous NO metabolism is significantly affected in a clear connection with the metabolism of reactive oxygen species (ROS) triggering nitro-oxidative stress. However, the exogenous NO application provides beneficial effects under As-stress conditions which can relieve oxidative damages by stimulating the antioxidant systems, regulation of the expression of the transporter and other defence-related genes, modification of root cell wall composition or the biosynthesis of enriched sulfur compounds such phytochelatins (PCs). This review aims to provide up-to-date information on the key NO hallmarks to relieve As-stress in higher plants. Furthermore, it will be analyzed the diverse genetic engineering techniques to increase the endogenous NO content which could open new biotechnological applications, especially in crops under arsenic stress.

An integrated approach of rice hull biochar-alternative water management as a promising tool to decrease inorganic arsenic levels and to sustain essential element contents in rice

Arsenic (As) in rice agroecosystems causes a loss of both rice yield and quality of rice grains. In this study, an integrated approach of biochar (BC) and alternative water management is proposed to reduce As content while sustaining essential elemental concentrations in rice. The rice cultivar, Jayanthi, was grown, irrigated with 1 mg L^-1 of As-containing water, under rice hull BC (RBC)-flooded, RBC-intermittent, conventional flooded, and intermittent treatments. The RBC has increased rice yield by 11%-19% in RBC-intermittent and -flooded treatments compared to the flooded treatment. Inorganic As content in rice tissues and abundance of Fe(III) reducing bacteria in the rhizosphere were lowered by 10%-83% and 40-70%, respectively, in RBC-flooded, -intermittent, and intermittent treatments over flooded treatment. Essential elemental concentrations (Fe, Mn, Zn, Mg, and Ca) in unpolished rice grains increased by 45%-329% in RBC-flooded and -intermittent treatments compared to flooded treatment. Overall, the integrated approach of RBC-intermittent practices has lowered inorganic As concentration in unpolished rice grains, while sustaining the levels of essential elements in rice grains, compared to other treatments. An integrated approach of RBC-intermittent practices is suggested for rice grown with As-contaminated water to improve the quality of rice, as well as tackling food-related malnutrition in people.

Improved rice cooking approach to maximise arsenic removal while preserving nutrient elements

Inorganic arsenic (iAs) is a group 1 carcinogen, and consumption of rice can be a significant pathway of iAs exposure in the food chain. Although there are regulations in place to control iAs for marketed rice in some countries, additional measures are explored to remove arsenic from rice. Due to the surface-bound and soluble nature of iAs, previous studies have shown that it can be removed to a significant extent using different cooking methods. Towards this goal we modified and tested the absorption method in combination with four home-friendly cooking treatments (UA = unwashed and absorbed, WA = washed and absorbed, PSA = pre-soaked and absorbed, and PBA = parboiled and absorbed) using both brown and white rice (3 types each). The nutrient elements were measured using ICP-MS and arsenic speciation was carried out using LC-ICP-MS. Overall, our results show that PBA was the optimum approach assessed, removing 54% and 73% of inorganic arsenic (iAs) for brown and white rice respectively, raising the margin of exposure (MOE) by 3.7 for white rice and 2.2 times for brown rice, thus allowing the consumption of rice more safely for infants, children and adults. Other cooking treatments were effective in reducing the iAs concentration from white rice only. Here we also report changes in selected nutrient elements (P, K, Mg, Zn and Mn) which are relatively abundant in rice. In general, the treatments retained more nutrients in brown rice than white rice. No significant loss of Zn was observed from both rice types and the loss of other nutrients was similar or less than in comparison to reported losses from rice cooked in excess water in the literature. We conclude that PBA is a promising technique and further research is needed by including different regional rice types and water quality levels.

Arsenic health risk assessment and the evaluation of groundwater quality using GWQI and multivariate statistical analysis in rural areas, Hashtroud, Iran

Arsenic (As) is a toxic metalloid that can cause significant health issues through drinking water. The present study was aimed to evaluate As distribution and the related health risks from drinking groundwater in rural areas of Hashtroud, Iran. Principal component analysis (PCA) and hierarchical cluster analysis (HCA) were also applied to better explain relationship pattern between different resources. The samples were taken from 51 locations in 37 villages. Arsenic concentration was determined by a polarograph device, and the corresponding carcinogenic and non-carcinogenic health risks were calculated based on US Environmental Protection Agency (EPA) guideline. PCA analysis extracted four main components that explained nearly 62% of data variance. Results pointed severe As contamination in the studied area, where As was detected in 78% of the samples ranging from less than 0.001 to 0.250 mg/L. Forty percent of the contaminated places violated guideline value of 10 μg/L suggested by EPA and institute of standards and industrial research of Iran (ISIRI). Based on our findings, 1329 people including 239 children were living in the areas with higher As contamination. Hazard quotient (HQ) in 72%, 59%, and 33% of the samples was higher than one for children, adolescent, and adult age groups, respectively. Excess life time cancer risk (ELCR) in almost 80% of all age groups was significantly higher than EPA recommended guideline (10^-4 or 10^-6). In summary, from the view point of arsenic HQ and ELCR, water resources in the studied areas were not appropriate for drinking and hygienic purposes; necessary and urgent management strategies to guarantee water supply and health safety for local residents should be considered.

Plant Nanobionic Sensors for Arsenic Detection

Arsenic is a highly toxic heavy-metal pollutant which poses a significant health risk to humans and other ecosystems. In this work, the natural ability of wild-type plants to pre-concentrate and extract arsenic from the belowground environment is exploited to engineer plant nanobionic sensors for real-time arsenic detection. Near-infrared fluorescent nanosensors are specifically designed for sensitive and selective detection of arsenite. These optical nanosensors are embedded in plant tissues to non-destructively access and monitor the internal dynamics of arsenic taken up by the plants via the roots. The integration of optical nanosensors with living plants enables the conversion of plants into self-powered autosamplers of arsenic from their environment. Arsenite detection is demonstrated with three different plant species as nanobionic sensors. Based on an experimentally validated kinetic model, the nanobionic sensor could detect 0.6 and 0.2 ppb levels of arsenic after 7 and 14 days respectively by exploiting the natural ability of Pteris cretica ferns to hyperaccumulate and tolerate exceptionally high level of arsenic. The sensor readout could also be interfaced with portable electronics at a standoff distance, potentially enabling applications in environmental monitoring and agronomic research.

Effect of the irrigation method and genotype on the bioaccumulation of toxic and trace elements in rice

The total concentration of three toxic elements (As, Cd and Pb) and five oligoelements (Cu, Mn, Mo, Ni and Se) has been determined using an original and completely validated ICP-MS method. This was applied to rice grains from 26 different genotypes cultivated in the same soil and irrigated with the same water in three different ways: by the traditional continuous flooding (CF) and by two intermittent methods, the sprinkler irrigation (SP) and the periodical saturation of the soil (SA). The adoption of SP hugely minimizes the average amounts of almost all elements in kernels (-98% for As, -90% for Se and Mn, -60% for Mo, -50% for Cd and Pb), with the only exception of Ni, whose concentration increases the average amount found in the CF rice by 7.5 times. Also SA irrigation is able to reduce the amounts of As, Mo and Pb in kernels but it significantly increases the amounts of Mn, Ni and - mainly - Cd. Also the nature of the genotype determined a wide variability of data within each irrigation method. Genotypes belonging to Indica subspecies are the best bioaccumulators of elements in both CF and SP methods and, never, the worst bioaccumulators for any element/irrigation method combination. In the principal component analysis, PC1 can differentiate samples irrigated by SP by those irrigated by CF and SA, whereas PC2 provides differentiation of CF samples by SA samples. When looking at the loading plot Ni is negatively correlated to the majority of the other elements, except Cu and Cd having negative loadings on PC2. These results allow to envisage that a proper combination of the irrigation method and the nature of rice genotype might be a very valuable tool in order to successfully achieve specific objectives of food safety or the attainment of functional properties.