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Zhang Y, Kaiser E, Dutta S, Sharkey TD, Marcelis LFM, Li T. Short-term salt stress reduces photosynthetic oscillations under triose phosphate utilization limitation in tomato. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:2994-3008. [PMID: 38436737 DOI: 10.1093/jxb/erae089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2023] [Accepted: 03/02/2024] [Indexed: 03/05/2024]
Abstract
Triose phosphate utilization (TPU) limitation is one of the three biochemical limitations of photosynthetic CO2 assimilation rate in C3 plants. Under TPU limitation, abrupt and large transitions in light intensity cause damped oscillations in photosynthesis. When plants are salt-stressed, photosynthesis is often down-regulated particularly under dynamic light intensity, but how salt stress affects TPU-related dynamic photosynthesis is still unknown. To elucidate this, tomato (Solanum lycopersicum) was grown with and without sodium chloride (NaCl, 100 mM) stress for 13 d. Under high CO2 partial pressure, rapid increases in light intensity caused profound photosynthetic oscillations. Salt stress reduced photosynthetic oscillations in leaves initially under both low- and high-light conditions and reduced the duration of oscillations by about 2 min. Besides, salt stress increased the threshold for CO2 partial pressure at which oscillations occurred. Salt stress increased TPU capacity without affecting Rubisco carboxylation and electron transport capacity, indicating the up-regulation of end-product synthesis capacity in photosynthesis. Thus salt stress may reduce photosynthetic oscillations by decreasing leaf internal CO2 partial pressure and/or increasing TPU capacity. Our results provide new insights into how salt stress modulates dynamic photosynthesis as controlled by CO2 availability and end-product synthesis.
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Affiliation(s)
- Yuqi Zhang
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Elias Kaiser
- Horticulture and Product Physiology, Department of Plant Sciences, Wageningen University, Wageningen, the Netherlands
| | - Satadal Dutta
- Department of Precision and Microsystems Engineering, Faculty of 3ME, TU Delft, Delft, the Netherlands
| | - Thomas D Sharkey
- MSU-DOE Plant Research Laboratory, East Lansing, MI 48824, USA
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI 48824, USA
- Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, USA
| | - Leo F M Marcelis
- Horticulture and Product Physiology, Department of Plant Sciences, Wageningen University, Wageningen, the Netherlands
| | - Tao Li
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China
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2
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Wang X, Chen Z, Sui N. Sensitivity and responses of chloroplasts to salt stress in plants. FRONTIERS IN PLANT SCIENCE 2024; 15:1374086. [PMID: 38693929 PMCID: PMC11061501 DOI: 10.3389/fpls.2024.1374086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Accepted: 04/04/2024] [Indexed: 05/03/2024]
Abstract
Chloroplast, the site for photosynthesis and various biochemical reactions, is subject to many environmental stresses including salt stress, which affects chloroplast structure, photosynthetic processes, osmotic balance, ROS homeostasis, and so on. The maintenance of normal chloroplast function is essential for the survival of plants. Plants have developed different mechanisms to cope with salt-induced toxicity on chloroplasts to ensure the normal function of chloroplasts. The salt tolerance mechanism is complex and varies with plant species, so many aspects of these mechanisms are not entirely clear yet. In this review, we explore the effect of salinity on chloroplast structure and function, and discuss the adaptive mechanisms by which chloroplasts respond to salt stress. Understanding the sensitivity and responses of chloroplasts to salt stress will help us understand the important role of chloroplasts in plant salt stress adaptation and lay the foundation for enhancing plant salt tolerance.
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Affiliation(s)
| | | | - Na Sui
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Jinan, China
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3
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Kuntz M, Dimnet L, Pullara S, Moyet L, Rolland N. The Main Functions of Plastids. Methods Mol Biol 2024; 2776:89-106. [PMID: 38502499 DOI: 10.1007/978-1-0716-3726-5_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/21/2024]
Abstract
Plastids are semi-autonomous organelles like mitochondria and derive from a cyanobacterial ancestor that was engulfed by a host cell. During evolution, they have recruited proteins originating from the nuclear genome, and only parts of their ancestral metabolic properties were conserved and optimized to limit functional redundancy with other cell compartments. Furthermore, large disparities in metabolic functions exist among various types of plastids, and the characterization of their various metabolic properties is far from being accomplished. In this review, we provide an overview of the main functions, known to be achieved by plastids or shared by plastids and other compartments of the cell. In short, plastids appear at the heart of all main plant functions.
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Affiliation(s)
- Marcel Kuntz
- Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRAE, Univ. Grenoble Alpes, IRIG, CEA Grenoble, Grenoble, France.
| | - Laura Dimnet
- Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRAE, Univ. Grenoble Alpes, IRIG, CEA Grenoble, Grenoble, France
| | - Sara Pullara
- Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRAE, Univ. Grenoble Alpes, IRIG, CEA Grenoble, Grenoble, France
| | - Lucas Moyet
- Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRAE, Univ. Grenoble Alpes, IRIG, CEA Grenoble, Grenoble, France
| | - Norbert Rolland
- Laboratoire de Physiologie Cellulaire et Végétale, CNRS, CEA, INRAE, Univ. Grenoble Alpes, IRIG, CEA Grenoble, Grenoble, France
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4
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Ning X, Lin M, Huang G, Mao J, Gao Z, Wang X. Research progress on iron absorption, transport, and molecular regulation strategy in plants. FRONTIERS IN PLANT SCIENCE 2023; 14:1190768. [PMID: 37465388 PMCID: PMC10351017 DOI: 10.3389/fpls.2023.1190768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 05/04/2023] [Indexed: 07/20/2023]
Abstract
Iron is a trace element essential for normal plant life activities and is involved in various metabolic pathways such as chlorophyll synthesis, photosynthesis, and respiration. Although iron is highly abundant in the earth's crust, the amount that can be absorbed and utilized by plants is very low. Therefore, plants have developed a series of systems for absorption, transport, and utilization in the course of long-term evolution. This review focuses on the findings of current studies of the Fe2+ absorption mechanism I, Fe3+ chelate absorption mechanism II and plant-microbial interaction iron absorption mechanism, particularly effective measures for artificially regulating plant iron absorption and transportation to promote plant growth and development. According to the available literature, the beneficial effects of using microbial fertilizers as iron fertilizers are promising but further evidence of the interaction mechanism between microorganisms and plants is required.
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Affiliation(s)
- Xinyi Ning
- Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China
- College of Environmental And Chemical Engineering, Nanchang Hangkong University, Nanchang, China
- Kiwifruit Engineering Research Center of Jiangxi Province, Nanchang, China
| | - Mengfei Lin
- Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China
- Kiwifruit Engineering Research Center of Jiangxi Province, Nanchang, China
| | - Guohua Huang
- Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China
- College of Environmental And Chemical Engineering, Nanchang Hangkong University, Nanchang, China
- Kiwifruit Engineering Research Center of Jiangxi Province, Nanchang, China
| | - Jipeng Mao
- Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China
- Kiwifruit Engineering Research Center of Jiangxi Province, Nanchang, China
| | - Zhu Gao
- Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China
- Kiwifruit Engineering Research Center of Jiangxi Province, Nanchang, China
- JInstitute of Biotechnology, Jiangxi Academy of Sciences, Ji’an, Jiangxi, China
| | - Xiaoling Wang
- Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China
- Kiwifruit Engineering Research Center of Jiangxi Province, Nanchang, China
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5
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Zhang X, Xue W, Zhang C, Wang C, Huang Y, Wang Y, Peng L, Liu Z. Cadmium pollution leads to selectivity loss of glutamate receptor channels for permeation of Ca 2+/Mn 2+/Fe 2+/Zn 2+ over Cd 2+ in rice plant. JOURNAL OF HAZARDOUS MATERIALS 2023; 452:131342. [PMID: 37023578 DOI: 10.1016/j.jhazmat.2023.131342] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 03/27/2023] [Accepted: 03/31/2023] [Indexed: 05/03/2023]
Abstract
The selective permeation of glutamate receptor channels (GLRs) for essential and toxic elements in plant cells is poorly understood. The present study found that the ratios between cadmium (Cd) and 7 essential elements (i.e., K, Mg, Ca, Mn, Fe, Zn and Cu) in grains and vegetative organs increased significantly with the increase of soil Cd levels. Accumulation of Cd resulted in the significant increase of Ca, Mn, Fe and Zn content and the expression levels of Ca channel genes (OsCNGC1,2 and OsOSCA1.1,2.4), while remarkable reduction of glutamate content and expression levels of GLR3.1-3.4 in rice. When planted in the same Cd-polluted soil, mutant fc8 displayed significantly higher content of Ca, Fe, Zn and expression levels of GLR3.1-3.4 than its wild type NPB. On the contrary, the ratios between Cd and essential elements in fc8 were significantly lower than that in NPB. These results indicate that Cd pollution may damage the structural integrity of GLRs by inhibiting glutamate synthesis and expression levels of GLR3.1-3.4, which leads to the increase of ion influx but the decrease of preferential selectivity for Ca2+/ Mn2+/ Fe2+/ Zn2+ over Cd2+ through GLRs in rice cells.
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Affiliation(s)
- Xin Zhang
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Weijie Xue
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Changbo Zhang
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Changrong Wang
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Yongchun Huang
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Yanting Wang
- Biomass and Bioenergy Research Centre, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Liangcai Peng
- Biomass and Bioenergy Research Centre, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Zhongqi Liu
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China.
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6
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de Melo HC. Plants detect and respond to sounds. PLANTA 2023; 257:55. [PMID: 36790549 DOI: 10.1007/s00425-023-04088-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Accepted: 02/02/2023] [Indexed: 06/18/2023]
Abstract
Specific sound patterns can affect plant development. Plants are responsive to environmental stimuli such as sound. However, little is known about their sensory apparatus, mechanisms, and signaling pathways triggered by these stimuli. Thus, it is important to understand the effect of sounds on plants and their technological potential. This review addresses the effects of sounds on plants, the sensory elements inherent to sound detection by the cell, as well as the triggering of signaling pathways that culminate in plant responses. The importance of sound standardization for the study of phytoacoustics is demonstrated. Studies on the sounds emitted or reflected by plants, acoustic stress in plants, and recognition of some sound patterns by plants are also explored.
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Affiliation(s)
- Hyrandir Cabral de Melo
- Laboratório de Fisiologia Vegetal, Departamento de Botânica, Universidade Federal de Goiás, Instituto de Ciências Biológicas. Avenida Esperança, S/N Campus Samambaia, Goiânia, GO, 74690-900, Brazil.
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7
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Hao DL, Zhou JY, Huang YN, Wang HR, Li XH, Guo HL, Liu JX. Roles of plastid-located phosphate transporters in carotenoid accumulation. FRONTIERS IN PLANT SCIENCE 2022; 13:1059536. [PMID: 36589064 PMCID: PMC9798012 DOI: 10.3389/fpls.2022.1059536] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Accepted: 11/28/2022] [Indexed: 06/17/2023]
Abstract
Enhanced carotenoid accumulation in plants is crucial for the nutritional and health demands of the human body since these beneficial substances are acquired through dietary intake. Plastids are the major organelles to accumulate carotenoids in plants and it is reported that manipulation of a single plastid phosphate transporter gene enhances carotenoid accumulation. Amongst all phosphate transport proteins including phosphate transporters (PHTs), plastidial phosphate translocators (pPTs), PHOSPHATE1 (PHO1), vacuolar phosphate efflux transporter (VPE), and Sulfate transporter [SULTR]-like phosphorus distribution transporter (SPDT) in plants, plastidic PHTs (PHT2 & PHT4) are found as the only clade that is plastid located, and manipulation of which affects carotenoid accumulation. Manipulation of a single chromoplast PHT (PHT4;2) enhances carotenoid accumulation, whereas manipulation of a single chloroplast PHT has no impact on carotenoid accumulation. The underlying mechanism is mainly attributed to their different effects on plastid orthophosphate (Pi) concentration. PHT4;2 is the only chromoplast Pi efflux transporter, and manipulating this single chromoplast PHT significantly regulates chromoplast Pi concentration. This variation subsequently modulates the carotenoid accumulation by affecting the supply of glyceraldehyde 3-phosphate, a substrate for carotenoid biosynthesis, by modulating the transcript abundances of carotenoid biosynthesis limited enzyme genes, and by regulating chromoplast biogenesis (facilitating carotenoid storage). However, at least five orthophosphate influx PHTs are identified in the chloroplast, and manipulating one of the five does not substantially modulate the chloroplast Pi concentration in a long term due to their functional redundancy. This stable chloroplast Pi concentration upon one chloroplast PHT absence, therefore, is unable to modulate Pi-involved carotenoid accumulation processes and finally does affect carotenoid accumulation in photosynthetic tissues. Despite these advances, several cases including the precise location of plastid PHTs, the phosphate transport direction mediated by these plastid PHTs, the plastid PHTs participating in carotenoid accumulation signal pathway, the potential roles of these plastid PHTs in leaf carotenoid accumulation, and the roles of these plastid PHTs in other secondary metabolites are waiting for further research. The clarification of the above-mentioned cases is beneficial for breeding high-carotenoid accumulation plants (either in photosynthetic or non-photosynthetic edible parts of plants) through the gene engineering of these transporters.
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Affiliation(s)
- Dong-Li Hao
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, China
| | - Jin-Yan Zhou
- Department of Agronomy and Horticulture, Jiangsu Vocational College of Agriculture and Forest, Jurong, China
| | - Ya-Nan Huang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, Nanjing, China
| | - Hao-Ran Wang
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, China
| | - Xiao-Hui Li
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, China
| | - Hai-Lin Guo
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, China
| | - Jian-Xiu Liu
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing, China
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8
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Dukic E, Gollan PJ, Grebe S, Paakkarinen V, Herdean A, Aro EM, Spetea C. The Arabidopsis thylakoid chloride channel ClCe regulates ATP availability for light-harvesting complex II protein phosphorylation. FRONTIERS IN PLANT SCIENCE 2022; 13:1050355. [PMID: 36483957 PMCID: PMC9722747 DOI: 10.3389/fpls.2022.1050355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 10/31/2022] [Indexed: 06/17/2023]
Abstract
Coping with changes in light intensity is challenging for plants, but well-designed mechanisms allow them to acclimate to most unpredicted situations. The thylakoid K+/H+ antiporter KEA3 and the voltage-dependent Cl- channel VCCN1 play important roles in light acclimation by fine-tuning electron transport and photoprotection. Good evidence exists that the thylakoid Cl- channel ClCe is involved in the regulation of photosynthesis and state transitions in conditions of low light. However, a detailed mechanistic understanding of this effect is lacking. Here we report that the ClCe loss-of-function in Arabidopsis thaliana results in lower levels of phosphorylated light-harvesting complex II (LHCII) proteins as well as lower levels of the photosystem I-LHCII complexes relative to wild type (WT) in low light conditions. The phosphorylation of the photosystem II core D1/D2 proteins was less affected either in low or high light conditions. In low light conditions, the steady-state levels of ATP synthase conductivity and of the total proton flux available for ATP synthesis were lower in ClCe loss-of-function mutants, but comparable to WT at standard and high light intensity. As a long-term acclimation strategy, expression of the ClCe gene was upregulated in WT plants grown in light-limiting conditions, but not in WT plants grown in standard light even when exposed for up to 8 h to low light. Taken together, these results suggest a role of ClCe in the regulation of the ATP synthase activity which under low light conditions impacts LHCII protein phosphorylation and state transitions.
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Affiliation(s)
- Emilija Dukic
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
| | - Peter J. Gollan
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Steffen Grebe
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Virpi Paakkarinen
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Andrei Herdean
- Climate Change Cluster, University of Technology Sydney, Ultimo, NSW, Australia
| | - Eva-Mari Aro
- Molecular Plant Biology Unit, Department of Life Technologies, University of Turku, Turku, Finland
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden
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9
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Liu S, Storti M, Finazzi G, Bowler C, Dorrell RG. A metabolic, phylogenomic and environmental atlas of diatom plastid transporters from the model species Phaeodactylum. FRONTIERS IN PLANT SCIENCE 2022; 13:950467. [PMID: 36212359 PMCID: PMC9546453 DOI: 10.3389/fpls.2022.950467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Accepted: 09/02/2022] [Indexed: 06/16/2023]
Abstract
Diatoms are an important group of algae, contributing nearly 40% of total marine photosynthetic activity. However, the specific molecular agents and transporters underpinning the metabolic efficiency of the diatom plastid remain to be revealed. We performed in silico analyses of 70 predicted plastid transporters identified by genome-wide searches of Phaeodactylum tricornutum. We considered similarity with Arabidopsis thaliana plastid transporters, transcriptional co-regulation with genes encoding core plastid metabolic pathways and with genes encoded in the mitochondrial genomes, inferred evolutionary histories using single-gene phylogeny, and environmental expression trends using Tara Oceans meta-transcriptomics and meta-genomes data. Our data reveal diatoms conserve some of the ion, nucleotide and sugar plastid transporters associated with plants, such as non-specific triose phosphate transporters implicated in the transport of phosphorylated sugars, NTP/NDP and cation exchange transporters. However, our data also highlight the presence of diatom-specific transporter functions, such as carbon and amino acid transporters implicated in intricate plastid-mitochondria crosstalk events. These confirm previous observations that substrate non-specific triose phosphate transporters (TPT) may exist as principal transporters of phosphorylated sugars into and out of the diatom plastid, alongside suggesting probable agents of NTP exchange. Carbon and amino acid transport may be related to intricate metabolic plastid-mitochondria crosstalk. We additionally provide evidence from environmental meta-transcriptomic/meta- genomic data that plastid transporters may underpin diatom sensitivity to ocean warming, and identify a diatom plastid transporter (J43171) whose expression may be positively correlated with temperature.
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Affiliation(s)
- Shun Liu
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Centre National De La Recherche Scientifique (CNRS), Institut National De La Santé Et De La Recherche Médicale (INSERM), Université Paris Sciences et Lettres (PSL), Paris, France
- CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
| | - Mattia Storti
- Univ. Grenoble Alpes (UGA), Centre National Recherche Scientifique (CNRS), Commissariat Energie Atomique Energies Alternatives (CEA), Institut National Recherche Agriculture Alimentation Environnement (INRAE), Interdisciplinary Research Institute of Grenoble (IRIG), Laboratoire de Physiologie Cellulaire et Végétale (LPCV), Grenoble, France
| | - Giovanni Finazzi
- Univ. Grenoble Alpes (UGA), Centre National Recherche Scientifique (CNRS), Commissariat Energie Atomique Energies Alternatives (CEA), Institut National Recherche Agriculture Alimentation Environnement (INRAE), Interdisciplinary Research Institute of Grenoble (IRIG), Laboratoire de Physiologie Cellulaire et Végétale (LPCV), Grenoble, France
| | - Chris Bowler
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Centre National De La Recherche Scientifique (CNRS), Institut National De La Santé Et De La Recherche Médicale (INSERM), Université Paris Sciences et Lettres (PSL), Paris, France
- CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
| | - Richard G. Dorrell
- Institut de Biologie de l’Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, Centre National De La Recherche Scientifique (CNRS), Institut National De La Santé Et De La Recherche Médicale (INSERM), Université Paris Sciences et Lettres (PSL), Paris, France
- CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
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10
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Genetic dissection of grain iron and zinc, and thousand kernel weight in wheat (Triticum aestivum L.) using genome-wide association study. Sci Rep 2022; 12:12444. [PMID: 35858934 PMCID: PMC9300641 DOI: 10.1038/s41598-022-15992-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Accepted: 07/04/2022] [Indexed: 01/13/2023] Open
Abstract
Genetic biofortification is recognized as a cost-effective and sustainable strategy to reduce micronutrient malnutrition. Genomic regions governing grain iron concentration (GFeC), grain zinc concentration (GZnC), and thousand kernel weight (TKW) were investigated in a set of 280 diverse bread wheat genotypes. The genome-wide association (GWAS) panel was genotyped using 35 K Axiom Array and phenotyped in five environments. The GWAS analysis showed a total of 17 Bonferroni-corrected marker-trait associations (MTAs) in nine chromosomes representing all the three wheat subgenomes. The TKW showed the highest MTAs (7), followed by GZnC (5) and GFeC (5). Furthermore, 14 MTAs were identified with more than 10% phenotypic variation. One stable MTA i.e. AX-95025823 was identified for TKW in both E4 and E5 environments along with pooled data, which is located at 68.9 Mb on 6A chromosome. In silico analysis revealed that the SNPs were located on important putative candidate genes such as Multi antimicrobial extrusion protein, F-box domain, Late embryogenesis abundant protein, LEA-18, Leucine-rich repeat domain superfamily, and C3H4 type zinc finger protein, involved in iron translocation, iron and zinc homeostasis, and grain size modifications. The identified novel MTAs will be validated to estimate their effects in different genetic backgrounds for subsequent use in marker-assisted selection. The identified SNPs will be valuable in the rapid development of biofortified wheat varieties to ameliorate the malnutrition problems.
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11
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Kamel NA. Bio-piezoelectricity: fundamentals and applications in tissue engineering and regenerative medicine. Biophys Rev 2022; 14:717-733. [PMID: 35783122 PMCID: PMC9243952 DOI: 10.1007/s12551-022-00969-z] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2022] [Accepted: 05/28/2022] [Indexed: 02/07/2023] Open
Abstract
In recent years, smart materials have piqued the interest of scientists and physicians in the biomedical community owing to their ability to modify their properties in response to an external stimulation or changes in their surroundings. Biocompatible piezoelectric materials are an interesting group of smart materials due to their ability to produce electrical charges without an external power source. Electric signals produced by piezoelectric scaffolds can renew and regenerate tissues through special pathways like that found in the extracellular matrix. This review summarizes the piezoelectric phenomenon, piezoelectric effects generated within biological tissues, piezoelectric biomaterials, and their applications in tissue engineering and their use as biosensors.
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Affiliation(s)
- Nagwa Ahmed Kamel
- Microwave Physics and Dielectrics Department, Physics Research Institute, National Research Centre, Cairo, Egypt
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12
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Yadav N, Gupta N, Singh DP. Ameliorating Effect of Bicarbonate on Salinity Induced Changes in the Growth, Nutrient Status, Cell Constituents and Photosynthetic Attributes of Microalga Chlorella vulgaris. BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2022; 108:491-499. [PMID: 33594450 DOI: 10.1007/s00128-021-03135-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Accepted: 01/29/2021] [Indexed: 06/12/2023]
Abstract
The cells of Chlorella vulgaris exhibited NaCl (0-400 mM) induced decrease in the growth, protein, chlorophyll, carbohydrate and total organic carbon, whereas total lipid and proline content increased with rising level of NaCl. Addition of NaHCO3 (20 mM) exhibited antagonistic effect against the adverse effect of salinity on the growth, level of macromolecules except proline. The SEM-EDS analysis of NaCl treated cells exhibited morphological variations as well as reduced accumulation of Na and Cl due to the presence of NaHCO3. The results on chlorophyll fluorescence induction kinetics revealed NaCl induced decline in the photosynthetic performance and quantum yield, while non-photochemical quenching of chlorophyll was enhanced, particularly at lower concentrations of NaCl. Addition of NaHCO3 to NaCl treated cells exhibited further increase in the non-photochemical quenching values. Thus, these results demonstrated that adverse impact of NaCl on the C. vulgaris cells was significantly mitigated in the presence of bicarbonate.
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Affiliation(s)
- Nisha Yadav
- Department of Environmental Science, BabasahebBhimraoAmbedkar University, VidyaVihar, Raebareli Road, Lucknow, UP, 226025, India
| | - Neha Gupta
- Department of Environmental Science, BabasahebBhimraoAmbedkar University, VidyaVihar, Raebareli Road, Lucknow, UP, 226025, India
| | - D P Singh
- Department of Environmental Science, BabasahebBhimraoAmbedkar University, VidyaVihar, Raebareli Road, Lucknow, UP, 226025, India.
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13
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He J, Rössner N, Hoang MTT, Alejandro S, Peiter E. Transport, functions, and interaction of calcium and manganese in plant organellar compartments. PLANT PHYSIOLOGY 2021; 187:1940-1972. [PMID: 35235665 PMCID: PMC8890496 DOI: 10.1093/plphys/kiab122] [Citation(s) in RCA: 40] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Accepted: 03/02/2021] [Indexed: 05/05/2023]
Abstract
Calcium (Ca2+) and manganese (Mn2+) are essential elements for plants and have similar ionic radii and binding coordination. They are assigned specific functions within organelles, but share many transport mechanisms to cross organellar membranes. Despite their points of interaction, those elements are usually investigated and reviewed separately. This review takes them out of this isolation. It highlights our current mechanistic understanding and points to open questions of their functions, their transport, and their interplay in the endoplasmic reticulum (ER), vesicular compartments (Golgi apparatus, trans-Golgi network, pre-vacuolar compartment), vacuoles, chloroplasts, mitochondria, and peroxisomes. Complex processes demanding these cations, such as Mn2+-dependent glycosylation or systemic Ca2+ signaling, are covered in some detail if they have not been reviewed recently or if recent findings add to current models. The function of Ca2+ as signaling agent released from organelles into the cytosol and within the organelles themselves is a recurrent theme of this review, again keeping the interference by Mn2+ in mind. The involvement of organellar channels [e.g. glutamate receptor-likes (GLR), cyclic nucleotide-gated channels (CNGC), mitochondrial conductivity units (MCU), and two-pore channel1 (TPC1)], transporters (e.g. natural resistance-associated macrophage proteins (NRAMP), Ca2+ exchangers (CAX), metal tolerance proteins (MTP), and bivalent cation transporters (BICAT)], and pumps [autoinhibited Ca2+-ATPases (ACA) and ER Ca2+-ATPases (ECA)] in the import and export of organellar Ca2+ and Mn2+ is scrutinized, whereby current controversial issues are pointed out. Mechanisms in animals and yeast are taken into account where they may provide a blueprint for processes in plants, in particular, with respect to tunable molecular mechanisms of Ca2+ versus Mn2+ selectivity.
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Affiliation(s)
- Jie He
- Faculty of Natural Sciences III, Plant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, D-06099 Halle (Saale), Germany
| | - Nico Rössner
- Faculty of Natural Sciences III, Plant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, D-06099 Halle (Saale), Germany
| | - Minh T T Hoang
- Faculty of Natural Sciences III, Plant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, D-06099 Halle (Saale), Germany
| | - Santiago Alejandro
- Faculty of Natural Sciences III, Plant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, D-06099 Halle (Saale), Germany
| | - Edgar Peiter
- Faculty of Natural Sciences III, Plant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, D-06099 Halle (Saale), Germany
- Author for communication:
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14
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Wan H, Yang F, Zhuang X, Cao Y, He J, Li H, Qin S, Lyu D. Malus rootstocks affect copper accumulation and tolerance in trees by regulating copper mobility, physiological responses, and gene expression patterns. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 287:117610. [PMID: 34174667 DOI: 10.1016/j.envpol.2021.117610] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 06/05/2021] [Accepted: 06/14/2021] [Indexed: 06/13/2023]
Abstract
We investigated the roles of rootstocks in Cu accumulation and tolerance in Malus plants by grafting 'Hanfu' (HF) scions onto M. baccata (Mb) and M. prunifolia (Mp) rootstocks, which have different Cu tolerances. The grafts were exposed to basal or excess Cu for 20 d. Excess Cu-treated HF/Mb had less biomass, and pronounced root architecture deformation and leaf ultrastructure damage than excess Cu-challenged HF/Mp. Root Cu concentrations and bio-concentration factor (BCF) were higher in HF/Mp than HF/Mb, whereas HF/Mb had higher stem and leaf Cu concentrations than HF/Mp. Excess Cu lowered root and aerial tissue BCF and translocation factor (Tf) in all plants; however, Tf was markedly higher in HF/Mb than in HF/Mp. The subcellular distribution of Cu in the roots and leaves indicated that excess Cu treatments increased Cu fixation in the root cell walls, which decreased Cu mobility. Compared to HF/Mb, HF/Mp sequestered more Cu in its root cell walls and less Cu in leaf plastids, nuclei, and mitochondria. Moreover, HF/Mp roots and leaves had higher concentrations of water-insoluble Cu compounds than HF/Mb, which reduced Cu mobility and toxicity. Fourier transform infrared spectroscopy analysis showed that the carboxyl, hydroxyl and acylamino groups of the cellulose, hemicellulose, pectin and proteins were the main Cu binding sites in the root cell walls. Excess Cu-induced superoxide anion and malondialdehyde were 28.6% and 5.1% lower, but soluble phenolics, ascorbate and glutathione were 10.5%, 41.9% and 17.7% higher in HF/Mp than HF/Mb leaves. Compared with HF/Mb, certain genes involved in Cu transport were downregulated, while other genes involved in detoxification were upregulated in HF/Mp roots and leaves. Our results show that Mp inhibited Cu translocation and mitigated Cu toxicity in Malus scions by regulating Cu mobility, antioxidant defense mechanisms, and transcription of key genes involved in Cu translocation and detoxification.
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Affiliation(s)
- Huixue Wan
- College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning, 110866, People's Republic of China; Key Lab of Fruit Quality Development and Regulation of Liaoning Province, Shenyang, Liaoning, 110866, People's Republic of China
| | - Fengying Yang
- Dalian Institute of Agricultural Sciences, Dalian, Liaoning, 116036, People's Republic of China
| | - Xiaolei Zhuang
- College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning, 110866, People's Republic of China; Key Lab of Fruit Quality Development and Regulation of Liaoning Province, Shenyang, Liaoning, 110866, People's Republic of China
| | - Yanhong Cao
- College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning, 110866, People's Republic of China; Key Lab of Fruit Quality Development and Regulation of Liaoning Province, Shenyang, Liaoning, 110866, People's Republic of China
| | - Jiali He
- College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning, 110866, People's Republic of China; Key Lab of Fruit Quality Development and Regulation of Liaoning Province, Shenyang, Liaoning, 110866, People's Republic of China.
| | - Huifeng Li
- Institute of Pomology, Shandong Academy of Agricultural Sciences, Tai'an, Shandong, 271000, People's Republic of China
| | - Sijun Qin
- College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning, 110866, People's Republic of China; Key Lab of Fruit Quality Development and Regulation of Liaoning Province, Shenyang, Liaoning, 110866, People's Republic of China
| | - Deguo Lyu
- College of Horticulture, Shenyang Agricultural University, Shenyang, Liaoning, 110866, People's Republic of China; Key Lab of Fruit Quality Development and Regulation of Liaoning Province, Shenyang, Liaoning, 110866, People's Republic of China
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15
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DeTar RA, Barahimipour R, Manavski N, Schwenkert S, Höhner R, Bölter B, Inaba T, Meurer J, Zoschke R, Kunz HH. Loss of inner-envelope K+/H+ exchangers impairs plastid rRNA maturation and gene expression. THE PLANT CELL 2021; 33:2479-2505. [PMID: 34235544 PMCID: PMC8364240 DOI: 10.1093/plcell/koab123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Accepted: 04/30/2021] [Indexed: 05/08/2023]
Abstract
The inner-envelope K+ EFFLUX ANTIPORTERS (KEA) 1 and 2 are critical for chloroplast development, ion homeostasis, and photosynthesis. However, the mechanisms by which changes in ion flux across the envelope affect organelle biogenesis remained elusive. Chloroplast development requires intricate coordination between the nuclear genome and the plastome. Many mutants compromised in plastid gene expression (PGE) display a virescent phenotype, that is delayed greening. The phenotypic appearance of Arabidopsis thaliana kea1 kea2 double mutants fulfills this criterion, yet a link to PGE has not been explored. Here, we show that a simultaneous loss of KEA1 and KEA2 results in maturation defects of the plastid ribosomal RNAs. This may be caused by secondary structure changes of rRNA transcripts and concomitant reduced binding of RNA-processing proteins, which we documented in the presence of skewed ion homeostasis in kea1 kea2. Consequently, protein synthesis and steady-state levels of plastome-encoded proteins remain low in mutants. Disturbance in PGE and other signs of plastid malfunction activate GENOMES UNCOUPLED 1-dependent retrograde signaling in kea1 kea2, resulting in a dramatic downregulation of GOLDEN2-LIKE transcription factors to halt expression of photosynthesis-associated nuclear-encoded genes (PhANGs). PhANG suppression delays the development of fully photosynthesizing kea1 kea2 chloroplasts, probably to avoid progressing photo-oxidative damage. Overall, our results reveal that KEA1/KEA2 function impacts plastid development via effects on RNA-metabolism and PGE.
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Affiliation(s)
- Rachael Ann DeTar
- Plant Physiology, School of Biological Sciences, Washington State University, PO Box 644236, Pullman, WA 99164-4236, USA
| | - Rouhollah Barahimipour
- Max Planck Institute of Molecular Plant Physiology, Wissenschaftspark Golm, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Nikolay Manavski
- Plant Sciences, Department I, LMU Munich, Großhaderner Str. 2-4, 82152 Planegg-Martinsried, Germany
| | - Serena Schwenkert
- Plant Sciences, Department I, LMU Munich, Großhaderner Str. 2-4, 82152 Planegg-Martinsried, Germany
| | - Ricarda Höhner
- Plant Physiology, School of Biological Sciences, Washington State University, PO Box 644236, Pullman, WA 99164-4236, USA
| | - Bettina Bölter
- Plant Sciences, Department I, LMU Munich, Großhaderner Str. 2-4, 82152 Planegg-Martinsried, Germany
| | - Takehito Inaba
- Department of Agricultural and Environmental Sciences, Faculty of Agriculture, University of Miyazaki, Miyazaki 889-2192, Japan
| | - Jörg Meurer
- Plant Sciences, Department I, LMU Munich, Großhaderner Str. 2-4, 82152 Planegg-Martinsried, Germany
| | - Reimo Zoschke
- Max Planck Institute of Molecular Plant Physiology, Wissenschaftspark Golm, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Hans-Henning Kunz
- Plant Physiology, School of Biological Sciences, Washington State University, PO Box 644236, Pullman, WA 99164-4236, USA
- Plant Sciences, Department I, LMU Munich, Großhaderner Str. 2-4, 82152 Planegg-Martinsried, Germany
- Author for correspondence:
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16
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Hameed A, Ahmed MZ, Hussain T, Aziz I, Ahmad N, Gul B, Nielsen BL. Effects of Salinity Stress on Chloroplast Structure and Function. Cells 2021; 10:2023. [PMID: 34440792 PMCID: PMC8395010 DOI: 10.3390/cells10082023] [Citation(s) in RCA: 61] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Accepted: 08/05/2021] [Indexed: 02/07/2023] Open
Abstract
Salinity is a growing problem affecting soils and agriculture in many parts of the world. The presence of salt in plant cells disrupts many basic metabolic processes, contributing to severe negative effects on plant development and growth. This review focuses on the effects of salinity on chloroplasts, including the structures and function of these organelles. Chloroplasts house various important biochemical reactions, including photosynthesis, most of which are considered essential for plant survival. Salinity can affect these reactions in a number of ways, for example, by changing the chloroplast size, number, lamellar organization, lipid and starch accumulation, and interfering with cross-membrane transportation. Research has shown that maintenance of the normal chloroplast physiology is necessary for the survival of the entire plant. Many plant species have evolved different mechanisms to withstand the harmful effects of salt-induced toxicity on their chloroplasts and its machinery. The differences depend on the plant species and growth stage and can be quite different between salt-sensitive (glycophyte) and salt-tolerant (halophyte) plants. Salt stress tolerance is a complex trait, and many aspects of salt tolerance in plants are not entirely clear yet. In this review, we discuss the different mechanisms of salt stress tolerance in plants with a special focus on chloroplast structure and its functions, including the underlying differences between glycophytes and halophytes.
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Affiliation(s)
- Abdul Hameed
- Dr. M. Ajmal Khan Institute for Sustainable Halophyte Utilization, University of Karachi, Sindh 75270, Pakistan; (A.H.); (M.Z.A.); (T.H.); (I.A.); (B.G.)
| | - Muhammad Zaheer Ahmed
- Dr. M. Ajmal Khan Institute for Sustainable Halophyte Utilization, University of Karachi, Sindh 75270, Pakistan; (A.H.); (M.Z.A.); (T.H.); (I.A.); (B.G.)
| | - Tabassum Hussain
- Dr. M. Ajmal Khan Institute for Sustainable Halophyte Utilization, University of Karachi, Sindh 75270, Pakistan; (A.H.); (M.Z.A.); (T.H.); (I.A.); (B.G.)
| | - Irfan Aziz
- Dr. M. Ajmal Khan Institute for Sustainable Halophyte Utilization, University of Karachi, Sindh 75270, Pakistan; (A.H.); (M.Z.A.); (T.H.); (I.A.); (B.G.)
| | - Niaz Ahmad
- Agricultural Biotechnology Division, National Institute for Biotechnology & Genetic Engineering (NIBGE), Faisalabad 44000, Pakistan;
- Department of Biotechnology, Pakistan Institute of Engineering and Applied Science (PIEAS), Islamabad 44000, Pakistan
| | - Bilquees Gul
- Dr. M. Ajmal Khan Institute for Sustainable Halophyte Utilization, University of Karachi, Sindh 75270, Pakistan; (A.H.); (M.Z.A.); (T.H.); (I.A.); (B.G.)
| | - Brent L. Nielsen
- Department of Microbiology & Molecular Biology, Brigham Young University, Provo, UT 84602, USA
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17
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Li M, Svoboda V, Davis G, Kramer D, Kunz HH, Kirchhoff H. Impact of ion fluxes across thylakoid membranes on photosynthetic electron transport and photoprotection. NATURE PLANTS 2021; 7:979-988. [PMID: 34140667 DOI: 10.1038/s41477-021-00947-5] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Accepted: 05/18/2021] [Indexed: 05/06/2023]
Abstract
In photosynthetic thylakoid membranes the proton motive force (pmf) not only drives ATP synthesis, in addition it is central to controlling and regulating energy conversion. As a consequence, dynamic fine-tuning of the two pmf components, electrical (Δψ) and chemical (ΔpH), is an essential element for adjusting photosynthetic light reactions to changing environmental conditions. Good evidence exists that the Δψ/ΔpH partitioning is controlled by thylakoid potassium and chloride ion transporters and channels. However, a detailed mechanistic understanding of how these thylakoid ion transporter/channels control pmf partitioning is lacking. Here, we combined functional measurements on potassium and chloride ion transporter and channel loss-of-function mutants with extended mathematical simulations of photosynthetic light reactions in thylakoid membranes to obtain detailed kinetic insights into the complex interrelationship between membrane energization and ion fluxes across thylakoid membranes. The data reveal that potassium and chloride fluxes in the thylakoid lumen determined by the K+/H+ antiporter KEA3 and the voltage-gated Cl- channel VCCN1/Best1 have distinct kinetic responses that lead to characteristic and light-intensity-dependent Δψ/ΔpH oscillations. These oscillations fine-tune photoprotective mechanisms and electron transport which are particularly important during the first minutes of illumination and under fluctuating light conditions. By employing the predictive power of the model, we unravelled the functional consequences of changes in KEA3 and VCCN1 abundance and regulatory/enzymatic parameters on membrane energization and photoprotection.
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Affiliation(s)
- Meng Li
- Institute of Biological Chemistry, Washington State University, Pullman, WA, USA
- School of Oceanography, University of Washington, Seattle, WA, USA
| | - Vaclav Svoboda
- Institute of Biological Chemistry, Washington State University, Pullman, WA, USA
| | - Geoffry Davis
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, USA
| | - David Kramer
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, USA
- Department of Biochemistry, Michigan State University, East Lansing, MI, USA
| | - Hans-Henning Kunz
- School of Biological Sciences, Washington State University, Pullman, WA, USA
| | - Helmut Kirchhoff
- Institute of Biological Chemistry, Washington State University, Pullman, WA, USA.
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18
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Gjindali A, Herrmann HA, Schwartz JM, Johnson GN, Calzadilla PI. A Holistic Approach to Study Photosynthetic Acclimation Responses of Plants to Fluctuating Light. FRONTIERS IN PLANT SCIENCE 2021; 12:668512. [PMID: 33936157 PMCID: PMC8079764 DOI: 10.3389/fpls.2021.668512] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Accepted: 03/23/2021] [Indexed: 05/10/2023]
Abstract
Plants in natural environments receive light through sunflecks, the duration and distribution of these being highly variable across the day. Consequently, plants need to adjust their photosynthetic processes to avoid photoinhibition and maximize yield. Changes in the composition of the photosynthetic apparatus in response to sustained changes in the environment are referred to as photosynthetic acclimation, a process that involves changes in protein content and composition. Considering this definition, acclimation differs from regulation, which involves processes that alter the activity of individual proteins over short-time periods, without changing the abundance of those proteins. The interconnection and overlapping of the short- and long-term photosynthetic responses, which can occur simultaneously or/and sequentially over time, make the study of long-term acclimation to fluctuating light in plants challenging. In this review we identify short-term responses of plants to fluctuating light that could act as sensors and signals for acclimation responses, with the aim of understanding how plants integrate environmental fluctuations over time and tailor their responses accordingly. Mathematical modeling has the potential to integrate physiological processes over different timescales and to help disentangle short-term regulatory responses from long-term acclimation responses. We review existing mathematical modeling techniques for studying photosynthetic responses to fluctuating light and propose new methods for addressing the topic from a holistic point of view.
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Affiliation(s)
- Armida Gjindali
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
| | - Helena A. Herrmann
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
- Division of Evolution & Genomic Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Jean-Marc Schwartz
- Division of Evolution & Genomic Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Giles N. Johnson
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
| | - Pablo I. Calzadilla
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
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19
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Przybyla-Toscano J, Boussardon C, Law SR, Rouhier N, Keech O. Gene atlas of iron-containing proteins in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 106:258-274. [PMID: 33423341 DOI: 10.1111/tpj.15154] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2020] [Revised: 12/17/2020] [Accepted: 01/04/2021] [Indexed: 05/27/2023]
Abstract
Iron (Fe) is an essential element for the development and physiology of plants, owing to its presence in numerous proteins involved in central biological processes. Here, we established an exhaustive, manually curated inventory of genes encoding Fe-containing proteins in Arabidopsis thaliana, and summarized their subcellular localization, spatiotemporal expression and evolutionary age. We have currently identified 1068 genes encoding potential Fe-containing proteins, including 204 iron-sulfur (Fe-S) proteins, 446 haem proteins and 330 non-Fe-S/non-haem Fe proteins (updates of this atlas are available at https://conf.arabidopsis.org/display/COM/Atlas+of+Fe+containing+proteins). A fourth class, containing 88 genes for which iron binding is uncertain, is indexed as 'unclear'. The proteins are distributed in diverse subcellular compartments with strong differences per category. Interestingly, analysis of the gene age index showed that most genes were acquired early in plant evolutionary history and have progressively gained regulatory elements, to support the complex organ-specific and development-specific functions necessitated by the emergence of terrestrial plants. With this gene atlas, we provide a valuable and updateable tool for the research community that supports the characterization of the molecular actors and mechanisms important for Fe metabolism in plants. This will also help in selecting relevant targets for breeding or biotechnological approaches aiming at Fe biofortification in crops.
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Affiliation(s)
| | - Clément Boussardon
- Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, Umeå, S-90187, Sweden
| | - Simon R Law
- Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, Umeå, S-90187, Sweden
| | | | - Olivier Keech
- Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, Umeå, S-90187, Sweden
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20
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Bashir K, Ahmad Z, Kobayashi T, Seki M, Nishizawa NK. Roles of subcellular metal homeostasis in crop improvement. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:2083-2098. [PMID: 33502492 DOI: 10.1093/jxb/erab018] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Accepted: 01/25/2021] [Indexed: 06/12/2023]
Abstract
Improvement of crop production in response to rapidly changing environmental conditions is a serious challenge facing plant breeders and biotechnologists. Iron (Fe), zinc (Zn), manganese (Mn), and copper (Cu) are essential micronutrients for plant growth and reproduction. These minerals are critical to several cellular processes including metabolism, photosynthesis, and cellular respiration. Regulating the uptake and distribution of these minerals could significantly improve plant growth and development, ultimately leading to increased crop production. Plant growth is limited by mineral deficiency, but on the other hand, excess Fe, Mn, Cu, and Zn can be toxic to plants; therefore, their uptake and distribution must be strictly regulated. Moreover, the distribution of these metals among subcellular organelles is extremely important for maintaining optimal cellular metabolism. Understanding the mechanisms controlling subcellular metal distribution and availability would enable development of crop plants that are better adapted to challenging and rapidly changing environmental conditions. Here, we describe advances in understanding of subcellular metal homeostasis, with a particular emphasis on cellular Fe homeostasis in Arabidopsis and rice, and discuss strategies for regulating cellular metabolism to improve plant production.
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Affiliation(s)
- Khurram Bashir
- Department of Biology, Syed Babar Ali School of Science and Engineering, Lahore, Pakistan
- Plant Genomics Network Research Team, Center for Sustainable Resource Science, Suehiro, Tsurumi Ku, Yokohama, Kanagawa, Japan
| | - Zarnab Ahmad
- Plant Genomics Network Research Team, Center for Sustainable Resource Science, Suehiro, Tsurumi Ku, Yokohama, Kanagawa, Japan
| | - Takanori Kobayashi
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, Nonoichi, Ishikawa, Japan
| | - Motoaki Seki
- Plant Genomics Network Research Team, Center for Sustainable Resource Science, Suehiro, Tsurumi Ku, Yokohama, Kanagawa, Japan
- Kihara Institute for Biological Research, Yokohama City University, Yokohama, Japan
- Plant Epigenome Regulation Laboratory, RIKEN Cluster for Pioneering Research, Wako, Saitama, Japan
| | - Naoko K Nishizawa
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, Nonoichi, Ishikawa, Japan
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo, Japan
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21
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Razi K, Muneer S. Drought stress-induced physiological mechanisms, signaling pathways and molecular response of chloroplasts in common vegetable crops. Crit Rev Biotechnol 2021; 41:669-691. [PMID: 33525946 DOI: 10.1080/07388551.2021.1874280] [Citation(s) in RCA: 63] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
Drought stress is one of the most adverse abiotic stresses that hinder plants' growth and productivity, threatening sustainable crop production. It impairs normal growth, disturbs water relations and reduces water-use efficiency in plants. However, plants have evolved many physiological and biochemical responses at the cellular and organism levels, in order to cope with drought stress. Photosynthesis, which is considered one of the most crucial biological processes for survival of plants, is greatly affected by drought stress. A gradual decrease in CO2 assimilation rates, reduced leaf size, stem extension and root proliferation under drought stress, disturbs plant water relations, reducing water-use efficiency, disrupts photosynthetic pigments and reduces the gas exchange affecting the plants adversely. In such conditions, the chloroplast, organelle responsible for photosynthesis, is found to counteract the ill effects of drought stress by its critical involvement as a sensor of changes occurring in the environment, as the first process that drought stress affects is photosynthesis. Beside photosynthesis, chloroplasts carry out primary metabolic functions such as the biosynthesis of starch, amino acids, lipids, and tetrapyroles, and play a central role in the assimilation of nitrogen and sulfur. Because the chloroplasts are central organelles where the photosynthetic reactions take place, modifications in their physiology and protein pools are expected in response to the drought stress-induced variations in leaf gas exchanges and the accumulation of ROS. Higher expression levels of various transcription factors and other proteins including heat shock-related protein, LEA proteins seem to be regulating the heat tolerance mechanisms. However, several aspects of plastid alterations, following a water deficit environment are still poorly characterized. Since plants adapt to various stress tolerance mechanisms to respond to drought stress, understanding mechanisms of drought stress tolerance in plants will lead toward the development of drought tolerance in crop plants. This review throws light on major droughts stress-induced molecular/physiological mechanisms in response to severe and prolonged drought stress and addresses the molecular response of chloroplasts in common vegetable crops. It further highlights research gaps, identifying unexplored domains and suggesting recommendations for future investigations.
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Affiliation(s)
- Kaukab Razi
- Horticulture and Molecular Physiology Lab, School of Agricultural Innovations and Advanced Learning, Vellore Institute of Technology, Vellore, Tamil Nadu, India.,School of Biosciences and Technology, Vellore Institute of Technology, Vellore, Tamil Nadu, India
| | - Sowbiya Muneer
- Horticulture and Molecular Physiology Lab, School of Agricultural Innovations and Advanced Learning, Vellore Institute of Technology, Vellore, Tamil Nadu, India
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Aranda Sicilia MN, Sánchez Romero ME, Rodríguez Rosales MP, Venema K. Plastidial transporters KEA1 and KEA2 at the inner envelope membrane adjust stromal pH in the dark. THE NEW PHYTOLOGIST 2021; 229:2080-2090. [PMID: 33111995 DOI: 10.1111/nph.17042] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Accepted: 10/10/2020] [Indexed: 05/08/2023]
Abstract
Photosynthesis and carbon fixation depend critically on the regulation of pH in chloroplast compartments in the daylight and at night. While it is established that an alkaline stroma is required for carbon fixation, it is not known how alkaline stromal pH is formed, maintained or regulated. We tested whether two envelope transporters, AtKEA1 and AtKEA2, directly affected stromal pH in isolated Arabidopsis chloroplasts using the fluorescent probe 2',7'-bis-(2-carboxyethyl)-5-(and-6)-carboxyfluorescein (BCECF). External K+ -induced alkalinization of the stroma was observed in chloroplasts from wild-type (WT) plants but not from kea1kea2 mutants, suggesting that KEA1 and KEA2 mediate K+ uptake/H+ loss to modulate stromal pH. While light-stimulated alkalinization of the stroma was independent of KEA1 and KEA2, the rate of decay to neutral pH in the dark is delayed in kea1kea2 mutants. However, the dark-induced loss of a pH gradient across the thylakoid membrane was similar in WT and mutant chloroplasts. This indicates that proton influx from the cytosol mediated by envelope K+ /H+ antiporters contributes to adjustment of stromal pH upon light to dark transitions.
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Affiliation(s)
- María Nieves Aranda Sicilia
- Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, CSIC, C/ Profesor Albareda 1, Granada, 18008, Spain
| | - María Elena Sánchez Romero
- Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, CSIC, C/ Profesor Albareda 1, Granada, 18008, Spain
| | - María Pilar Rodríguez Rosales
- Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, CSIC, C/ Profesor Albareda 1, Granada, 18008, Spain
| | - Kees Venema
- Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, CSIC, C/ Profesor Albareda 1, Granada, 18008, Spain
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Li Z, Mei X, Li T, Yang S, Qin L, Li B, Zu Y. Effects of calcium application on activities of membrane transporters in Panax notoginseng under cadmium stress. CHEMOSPHERE 2021; 262:127905. [PMID: 33182152 DOI: 10.1016/j.chemosphere.2020.127905] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Revised: 07/31/2020] [Accepted: 08/02/2020] [Indexed: 06/11/2023]
Abstract
Pot experiments were conducted to study combined effects of Ca and Cd on contents of Cd and Ca, and membrane transporters activities (CC (calcium channel protein), ATPase and CAXs (cationic/H+ antiporter) of two-year old Panax notoginseng with application of different concentrations of Ca2+ (0, 180 and 360 mgkg-1, prepared by Ca(OH)2 and CaCl2, respectively) under Cd2+ (0, 0.6, 6.0, and 12.0 mgkg-1, prepared by CdCl2•2.5H2O) treatments. The results showed that soil available Cd contents decreased with Ca(OH)2 and CaCl2 application. Soil pH value increased with Ca(OH)2 application. The contents of Cd in all parts of P. notoginseng increased with the increase in Cd treatment concentrations. The Cd content of P. notoginseng decreased with Ca(OH)2 and CaCl2 treatments. The activities of CC and ATPase in the main root of P. notoginseng decreased with the increase in Cd treatment concentrations and application of CaCl2. The activities of CC and ATPase increased with Ca(OH)2application. The activity of CAXs in the main root of P. notoginseng increased with the increase of Cd treatment concentration. The results indicate that Ca and Cd should be both related to membrane transporters activities and activities of CC, ATPase and CAXs are promoted by cooperation of Ca2+and OH+, which suggest the Ca(OH)2 application should be better than application of CaCl2 for Cd detoxification.
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Affiliation(s)
- Zuran Li
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming, 650201, China
| | - Xinyue Mei
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, China
| | - Tao Li
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, China
| | - Shu Yang
- College of Science, Yunnan Agricultural University, Kunming, 650201, China
| | - Li Qin
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, China
| | - Bo Li
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, China
| | - Yanqun Zu
- College of Resources and Environment, Yunnan Agricultural University, Kunming, 650201, China.
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Nogueira PFM, Marangoni VS, Zucolotto V. The aspect ratio of gold nanorods as a cytotoxicity factor on Raphidocelis subcaptata. ENVIRONMENTAL RESEARCH 2020; 191:110133. [PMID: 32871150 DOI: 10.1016/j.envres.2020.110133] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 07/29/2020] [Accepted: 08/19/2020] [Indexed: 06/11/2023]
Abstract
Gold nanorods (AuNRs) are promising nanoscale materials for several technological and biomedical applications. The physicochemical properties of AuNRs, including size, shape and surface features, are crucial factors affecting their cytotoxicity. In this study, we investigated the effects of different aspect ratios of AuNRs (1.90, 2.35, 3.25 and 3.50) at concentrations of 2 and 10 μg mL-1 on their cytotoxicity and cellular uptake in green algae Raphidocelis subcaptata. The experiment was performed in oligotrophic freshwater medium in a growth chamber with constant agitation of 80 rpm under controlled conditions (120 μEm-2s-1 illumination; 12:12h light dark cycle and constant temperature of 22 ± 2 °C). The algal growth was monitored daily for 96 h via electronic absorbance scanning at 600-750 nm. Oxidative stress, cell viability and autofluorescence were evaluated using a flow cytometer. Oxidative stress quantified by loading cultures with the fluorescent dye 2', 7'-dichlorofluorescein diacetate. To assess algal cell viability, propidium iodide was selected as the fluorescent probe. Our results indicated that the aspect ratio of AuNRs mediates their biological effects in green algae R. subcaptata. A positive correlation between oxidative stress and increase of aspect ratio was found at concentration of 10 μg mL-1. Higher cytotoxicity and mortality were observed for algae incubated with higher aspect ratios AuNRs (3.50). These findings may be useful to understand the impact of the AuNRs in aquatic environments, contributing to ecosystem management and nanomaterials regulation.
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Affiliation(s)
- Patricia Franklin Mayrink Nogueira
- Nanomedicine and Nanotoxicology Group, Institute of Physics of São Carlos, University of São Paulo, P.O. Box 369, Av. Trabalhador São-Carlense, 400, 13566-590, São Carlos, S.P., Brazil
| | - Valeria Spolon Marangoni
- Nanomedicine and Nanotoxicology Group, Institute of Physics of São Carlos, University of São Paulo, P.O. Box 369, Av. Trabalhador São-Carlense, 400, 13566-590, São Carlos, S.P., Brazil
| | - Valtencir Zucolotto
- Nanomedicine and Nanotoxicology Group, Institute of Physics of São Carlos, University of São Paulo, P.O. Box 369, Av. Trabalhador São-Carlense, 400, 13566-590, São Carlos, S.P., Brazil.
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25
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Kosakivska IV, Babenko LM, Romanenko KO, Korotka IY, Potters G. Molecular mechanisms of plant adaptive responses to heavy metals stress. Cell Biol Int 2020; 45:258-272. [PMID: 33200493 DOI: 10.1002/cbin.11503] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 10/21/2020] [Accepted: 11/11/2020] [Indexed: 12/29/2022]
Abstract
Heavy metals (HMs) are among the main environmental pollutants that can enter the soil, water bodies, and the atmosphere as a result of natural processes (weathering of rocks, volcanic activity), and also as a result of human activities (mining, metallurgical and chemical industries, transport, application of mineral fertilizers). Plants counteract the HMs stresses through morphological and physiological adaptations, which are imparted through well-coordinated molecular mechanisms. New approaches, which include transcriptomics, genomics, proteomics, and metabolomics analyses, have opened the paths to understand such complex networks. This review sheds light on molecular mechanisms included in plant adaptive and defense responses during metal stress. It is focused on the entry of HMs into plants, its transport and accumulation, effects on the main physiological processes, gene expressions included in plant adaptive and defense responses during HM stress. Analysis of new data allowed the authors to conclude that the most important mechanism of HM tolerance is extracellular and intracellular HM sequestration. Organic anions (malate, oxalate, etc.) provide extracellular sequestration of HM ions. Intracellular HM sequestration depends not only on a direct binding mechanism with different polymers (pectin, lignin, cellulose, hemicellulose, etc.) or organic anions but also on the action of cellular receptors and transmembrane transporters. We focused on the functioning chloroplasts, mitochondria, and the Golgi complex under HM stress. The currently known molecular mechanisms of plant tolerance to the toxic effects of HMs are analyzed.
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Affiliation(s)
- Iryna V Kosakivska
- Phytohormonology Department, M. G. Kholodny Institute of Botany of the National Academy of Sciences of Ukraine, Kyiv, Ukraine
| | - Lidia M Babenko
- Phytohormonology Department, M. G. Kholodny Institute of Botany of the National Academy of Sciences of Ukraine, Kyiv, Ukraine
| | - Kateryna O Romanenko
- Phytohormonology Department, M. G. Kholodny Institute of Botany of the National Academy of Sciences of Ukraine, Kyiv, Ukraine
| | - Iryna Y Korotka
- Phytohormonology Department, M. G. Kholodny Institute of Botany of the National Academy of Sciences of Ukraine, Kyiv, Ukraine
| | - Geert Potters
- Department of Phytohormonology, Antwerp Maritime Academy, Antwerp, Belgium
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Li M, Mukhopadhyay R, Svoboda V, Oung HMO, Mullendore DL, Kirchhoff H. Measuring the dynamic response of the thylakoid architecture in plant leaves by electron microscopy. PLANT DIRECT 2020; 4:e00280. [PMID: 33195966 PMCID: PMC7644818 DOI: 10.1002/pld3.280] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2020] [Revised: 09/15/2020] [Accepted: 09/29/2020] [Indexed: 05/19/2023]
Abstract
UNLABELLED The performance of the photosynthesis machinery in plants, including light harvesting, electron transport, and protein repair, is controlled by structural changes in the thylakoid membrane system inside the chloroplasts. In particular, the structure of the stacked grana area of thylakoid membranes is highly dynamic, changing in response to different environmental cues such as light intensity. For example, the aqueous thylakoid lumen enclosed by thylakoid membranes in grana has been documented to swell in the presence of light. However, light-induced alteration of the stromal gap in the stacked grana (partition gap) and of the unstacked stroma lamellae has not been well characterized. Light-induced changes in the entire thylakoid membrane system, including the lumen in both stacked and unstacked domains as well as the partition gap, are presented here, and the functional implications are discussed. This structural analysis was made possible by development of a robust semi-automated image analysis method combined with optimized plant tissue fixation techniques for transmission electron microscopy generating quantitative structural results for the analysis of thylakoid ultrastructure. SIGNIFICANCE STATEMENT A methodical pipeline ranging from optimized leaf tissue preparation for electron microscopy to quantitative image analysis was established. This methodical development was employed to study details of light-induced changes in the plant thylakoid ultrastructure. It was found that the lumen of the entire thylakoid system (stacked and unstacked domains) undergoes light-induced swelling, whereas adjacent membranes on the stroma side in stacked grana thylakoid approach each other.
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Affiliation(s)
- Meng Li
- Institute of Biological ChemistryWashington State UniversityPullmanWAUSA
- Present address:
School of OceanographyUniversity of WashingtonSeattleWAUSA
| | - Roma Mukhopadhyay
- Institute of Biological ChemistryWashington State UniversityPullmanWAUSA
| | - Václav Svoboda
- Institute of Biological ChemistryWashington State UniversityPullmanWAUSA
| | | | | | - Helmut Kirchhoff
- Institute of Biological ChemistryWashington State UniversityPullmanWAUSA
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Wang C, Ou D, Wang C, Lu X, Du J, Li J, Lai J, Zhang S, Yang C. Functional characterization of a chloroplast-localized Mn 2+(Ca 2+)/H + antiporter, ZmmCCHA1 from Zea mays ssp. mexicana L. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 155:396-405. [PMID: 32814276 DOI: 10.1016/j.plaphy.2020.08.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Revised: 07/03/2020] [Accepted: 08/02/2020] [Indexed: 05/24/2023]
Abstract
The annual Zea mays ssp. mexicana L. is a member of the teosinte group and a close wild relative of maize. Thus, Zea mays ssp. mexicana L. can be effectively used in maize breeding. AtCCHA1 is a Mn2+ and/or Ca2+/H+ antiporter localized in chloroplasts in Arabidopsis. In this study, its homolog from Zea mays ssp. mexicana L., ZmmCCHA1, was isolated and characterized. The transcriptional level of ZmmCCHA1 in Zea mays ssp. mexicana L. was repressed in response to excessive Ca2+ or Mn2+. Heterologous functional complementation assays using yeast mutants showed that ZmmCCHA1 mediates Ca2+ and Mn2+ transport. The ZmmCCHA1 protein was localized in the chloroplasts when expressed in tobacco leaves. Furthermore, ectopic overexpression of ZmmCCHA1 in the Arabidopsis ccha1 mutant rescued the mutant defects on growth and the photosynthetic proteins in the thylakoid membranes. Moreover, the photosynthetic phenotypes of Arabidopsis ccha1 mutant at steady-state were greatly but not completely complemented by the overexpression of ZmmCCHA1. In addition, overexpressing the ZmmCCHA1 rescued the sensitives of PSII in the Arabidopsis ccha1 mutant to Mn2+ deficiency or high Ca2+ condition. These results indicate that the isolated ZmmCCHA1 is the homolog of AtCCHA1 and plays a conserved role in maintaining the Mn2+ and/or Ca2+ homeostasis in chloroplasts which is critical for the function of PSII in photosynthesis.
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Affiliation(s)
- Caijuan Wang
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Dingwen Ou
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Chao Wang
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Xiang Lu
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Jinju Du
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Jieqiang Li
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China; Dongli Planting and Farming Industrial Co., LTD, Lianzhou, China
| | - Jianbin Lai
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Shengchun Zhang
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China
| | - Chengwei Yang
- Guangdong Provincial Key Laboratory of Biotechnology for Plant Development, School of Life Science, South China Normal University, 510631, Guangzhou, China.
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Schmidt SB, Eisenhut M, Schneider A. Chloroplast Transition Metal Regulation for Efficient Photosynthesis. TRENDS IN PLANT SCIENCE 2020; 25:817-828. [PMID: 32673582 DOI: 10.1016/j.tplants.2020.03.003] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Revised: 02/14/2020] [Accepted: 03/04/2020] [Indexed: 05/24/2023]
Abstract
Plants require sunlight, water, CO2, and essential nutrients to drive photosynthesis and fulfill their life cycle. The photosynthetic apparatus resides in chloroplasts and fundamentally relies on transition metals as catalysts and cofactors. Accordingly, chloroplasts are particularly rich in iron (Fe), manganese (Mn), and copper (Cu). Owing to their redox properties, those metals need to be carefully balanced within the cell. However, the regulation of transition metal homeostasis in chloroplasts is poorly understood. With the availability of the arabidopsis genome information and membrane protein databases, a wider catalogue for searching chloroplast metal transporters has considerably advanced the study of transition metal regulation. This review provides an updated overview of the chloroplast transition metal requirements and the transporters involved for efficient photosynthesis in higher plants.
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Affiliation(s)
- Sidsel Birkelund Schmidt
- Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, 1871 Frederiksberg C, Denmark
| | - Marion Eisenhut
- Biochemie der Pflanzen, Heinrich-Heine-Universität Düsseldorf, 40225 Düsseldorf, Germany.
| | - Anja Schneider
- Molekularbiologie der Pflanzen (Botanik), Department Biologie I, Ludwig-Maximilians-Universität München, 82152 Martinsried, Germany.
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29
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The plastid NAD(P)H dehydrogenase-like complex: structure, function and evolutionary dynamics. Biochem J 2020; 476:2743-2756. [PMID: 31654059 DOI: 10.1042/bcj20190365] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Revised: 08/27/2019] [Accepted: 09/02/2019] [Indexed: 11/17/2022]
Abstract
The thylakoid NAD(P)H dehydrogenase-like (NDH) complex is a large protein complex that reduces plastoquinone and pumps protons into the lumen generating protonmotive force. In plants, the complex consists of both nuclear and chloroplast-encoded subunits. Despite its perceived importance for stress tolerance and ATP generation, chloroplast-encoded NDH subunits have been lost numerous times during evolution in species occupying seemingly unrelated environmental niches. We have generated a phylogenetic tree that reveals independent losses in multiple phylogenetic lineages, and we use this tree as a reference to discuss possible evolutionary contexts that may have relaxed selective pressure for retention of ndh genes. While we are still yet unable to pinpoint a singular specific lifestyle that negates the need for NDH, we are able to rule out several long-standing explanations. In light of this, we discuss the biochemical changes that would be required for the chloroplast to dispense with NDH functionality with regards to known and proposed NDH-related reactions.
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30
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Li J, Yokosho K, Liu S, Cao HR, Yamaji N, Zhu XG, Liao H, Ma JF, Chen ZC. Diel magnesium fluctuations in chloroplasts contribute to photosynthesis in rice. NATURE PLANTS 2020; 6:848-859. [PMID: 32541951 DOI: 10.1038/s41477-020-0686-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Accepted: 05/04/2020] [Indexed: 05/24/2023]
Abstract
Photosynthesis provides food, fibre and fuel that support our society; understanding the mechanisms controlling dynamic changes in this process helps identify new options to improve photosynthesis. Photosynthesis shows diel changes, which have been largely attributed to external light/dark conditions, as well as internal gene expression and the post-translational modification of critical enzymes. Here we report diel fluctuations of magnesium (Mg) in rice (Oryza sativa) chloroplasts, which may function as a rhythm regulator contributing to the post-translational regulation of photosynthetic CO2 assimilation in rice. We found that a chloroplast-localized Mg2+ transporter gene, OsMGT3, which is rhythmically expressed in leaf mesophyll cells, partly modulates Mg fluctuations in rice chloroplasts. Knockout of OsMGT3 substantially reduced Mg2+ uptake, as well as the amplitude of free Mg2+ fluctuations in chloroplasts, which was closely associated with a decrease in ribulose 1,5-bisphosphate carboxylase activity in vivo and a consequent decline in the photosynthetic rate. In addition, the mesophyll-specific overexpression of OsMGT3 remarkably improved photosynthetic efficiency and growth performance in rice. Taken together, these observations demonstrate that OsMGT3-dependent diel Mg fluctuations in chloroplasts may contribute to Mg-dependent enzyme activities for photosynthesis over the daily cycle. Enhancing Mg2+ input to chloroplasts could be a potential approach to improving photosynthetic efficiency in plants.
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Affiliation(s)
- Jian Li
- Root Biology Center, College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Kengo Yokosho
- Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan
| | - Sheng Liu
- Root Biology Center, College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Hong Rui Cao
- Root Biology Center, College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Naoki Yamaji
- Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan
| | - Xin Guang Zhu
- National Key Laboratory of Plant Molecular Genetics, CAS Center of Excellence for Molecular Plant Sciences and Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, China
| | - Hong Liao
- Root Biology Center, College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jian Feng Ma
- Institute of Plant Science and Resources, Okayama University, Kurashiki, Japan.
| | - Zhi Chang Chen
- Root Biology Center, College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, China.
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Zhao C, Zhang H, Song C, Zhu JK, Shabala S. Mechanisms of Plant Responses and Adaptation to Soil Salinity. Innovation (N Y) 2020; 1:100017. [PMID: 34557705 PMCID: PMC8454569 DOI: 10.1016/j.xinn.2020.100017] [Citation(s) in RCA: 268] [Impact Index Per Article: 67.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
Soil salinity is a major environmental stress that restricts the growth and yield of crops. Understanding the physiological, metabolic, and biochemical responses of plants to salt stress and mining the salt tolerance-associated genetic resource in nature will be extremely important for us to cultivate salt-tolerant crops. In this review, we provide a comprehensive summary of the mechanisms of salt stress responses in plants, including salt stress-triggered physiological responses, oxidative stress, salt stress sensing and signaling pathways, organellar stress, ion homeostasis, hormonal and gene expression regulation, metabolic changes, as well as salt tolerance mechanisms in halophytes. Important questions regarding salt tolerance that need to be addressed in the future are discussed.
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Affiliation(s)
- Chunzhao Zhao
- Shanghai Center for Plant Stress Biology and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Heng Zhang
- State Key Laboratory of Plant Molecular Genetics, Shanghai Center for Plant Stress Biology, Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Chunpeng Song
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Jian-Kang Zhu
- Shanghai Center for Plant Stress Biology and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907, USA
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia
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32
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Yamori W, Kusumi K, Iba K, Terashima I. Increased stomatal conductance induces rapid changes to photosynthetic rate in response to naturally fluctuating light conditions in rice. PLANT, CELL & ENVIRONMENT 2020; 43:1230-1240. [PMID: 31990076 DOI: 10.1111/pce.13725] [Citation(s) in RCA: 82] [Impact Index Per Article: 20.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Revised: 01/06/2020] [Accepted: 01/19/2020] [Indexed: 05/08/2023]
Abstract
A close correlation between stomatal conductance and the steady-state photosynthetic rate has been observed for diverse plant species under various environmental conditions. However, it remains unclear whether stomatal conductance is a major limiting factor for the photosynthetic rate under naturally fluctuating light conditions. We analysed a SLAC1 knockout rice line to examine the role of stomatal conductance in photosynthetic responses to fluctuating light. SLAC1 encodes a stomatal anion channel that regulates stomatal closure. Long exposures to weak light before treatments with strong light increased the photosynthetic induction time required for plants to reach a steady-state photosynthetic rate and also induced stomatal limitation of photosynthesis by restricting the diffusion of CO2 into leaves. The slac1 mutant exhibited a significantly higher rate of stomatal opening after an increase in irradiance than wild-type plants, leading to a higher rate of photosynthetic induction. Under natural conditions, in which irradiance levels are highly variable, the stomata of the slac1 mutant remained open to ensure efficient photosynthetic reaction. These observations reveal that stomatal conductance is important for regulating photosynthesis in rice plants in the natural environment with fluctuating light.
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Affiliation(s)
- Wataru Yamori
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
- Institute for Sustainable Agro-Ecosystem Services, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
- Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency (JST), Saitama, Japan
| | - Kensuke Kusumi
- Department of Biology, Faculty of Science, Kyushu University, Fukuoka, Japan
| | - Koh Iba
- Department of Biology, Faculty of Science, Kyushu University, Fukuoka, Japan
- Core Research for Evolutionary Science and Technology (CREST), JST, Saitama, Japan
| | - Ichiro Terashima
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
- Core Research for Evolutionary Science and Technology (CREST), JST, Saitama, Japan
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33
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Kimura H, Hashimoto-Sugimoto M, Iba K, Terashima I, Yamori W. Improved stomatal opening enhances photosynthetic rate and biomass production in fluctuating light. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:2339-2350. [PMID: 32095822 DOI: 10.1093/jxb/eraa090] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2019] [Accepted: 02/23/2020] [Indexed: 05/07/2023]
Abstract
It has been reported that stomatal conductance often limits the steady-state photosynthetic rate. On the other hand, the stomatal limitation of photosynthesis in fluctuating light remains largely unknown, although in nature light fluctuates due to changes in sun position, cloud cover, and the overshadowing canopy. In this study, we analysed three mutant lines of Arabidopsis with increased stomatal conductance to examine to what extent stomatal opening limits photosynthesis in fluctuating light. The slac1 (slow anion channel-associated 1) and ost1 (open stomata 1) mutants with stay-open stomata, and the PATROL1 (proton ATPase translocation control 1) overexpression line with faster stomatal opening responses exhibited higher photosynthetic rates and plant growth in fluctuating light than the wild-type, whereas these four lines showed similar photosynthetic rates and plant growth in constant light. The slac1 and ost1 mutants tended to keep their stomata open in fluctuating light, resulting in lower water-use efficiency (WUE) than the wild-type. However, the PATROL1 overexpression line closed stomata when needed and opened stomata immediately upon irradiation, resulting in similar WUE to the wild-type. The present study clearly shows that there is room to optimize stomatal responses, leading to greater photosynthesis and biomass accumulation in fluctuating light in nature.
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Affiliation(s)
- Haruki Kimura
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | | | - Koh Iba
- Department of Biology, Faculty of Science, Kyushu University, Fukuoka, Japan
| | - Ichiro Terashima
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | - Wataru Yamori
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
- Institute for Sustainable Agro-Ecosystem Services, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
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Cheng J, Zhu Y, Li K, Lu H, Shi Z. Calcinated MIL-100(Fe) as a CO 2 adsorbent to promote biomass productivity of Arthrospira platensis cells. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 699:134375. [PMID: 31677465 DOI: 10.1016/j.scitotenv.2019.134375] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 09/03/2019] [Accepted: 09/08/2019] [Indexed: 06/10/2023]
Abstract
In order to solve the problems of short residence time and low diffusion of CO2 gas in microalgal solution, calcinated metal-organic framework MIL-100(Fe) were first used as CO2 adsorbents to promote the growth of Arthrospira platensis cells by increasing carbon fixation. The adsorbent (MIL-100(Fe)-4 h) containing unsaturated metal sites, improved the conversion of CO2 to dissolved inorganic carbon by 52.3% and concentration of HCO3- by 20.0% in culture medium, as compared to the medium without CO2 adsorbent added. The increased HCO3- concentration facilitated carboxysome accumulation (increased to 21.7 times) to activate the photosynthetic Calvin cycle in Arthrospira cells. The increased cell growth rate promoted cell volume by 132% and knot length by 102%, while the fractal dimension of the cell surface decreased by 13.5%. The biomass productivity of Arthrospira cells cultivated with the CO2 adsorbent MIL-100(Fe)-4 h remarkably increased by 81.9%.
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Affiliation(s)
- Jun Cheng
- State Key Laboratory of Clean Energy Utilization, Zhejiang University, Hangzhou, China.
| | - Yanxia Zhu
- State Key Laboratory of Clean Energy Utilization, Zhejiang University, Hangzhou, China.
| | - Ke Li
- State Key Laboratory of Clean Energy Utilization, Zhejiang University, Hangzhou, China
| | - Hongxiang Lu
- State Key Laboratory of Clean Energy Utilization, Zhejiang University, Hangzhou, China
| | - Zhengzhan Shi
- State Key Laboratory of Clean Energy Utilization, Zhejiang University, Hangzhou, China.
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Navazio L, Formentin E, Cendron L, Szabò I. Chloroplast Calcium Signaling in the Spotlight. FRONTIERS IN PLANT SCIENCE 2020; 11:186. [PMID: 32226434 PMCID: PMC7081724 DOI: 10.3389/fpls.2020.00186] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 02/07/2020] [Indexed: 05/22/2023]
Abstract
Calcium has long been known to regulate the metabolism of chloroplasts, concerning both light and carbon reactions of photosynthesis, as well as additional non photosynthesis-related processes. In addition to undergo Ca2+ regulation, chloroplasts can also influence the overall Ca2+ signaling pathways of the plant cell. Compelling evidence indicate that chloroplasts can generate specific stromal Ca2+ signals and contribute to the fine tuning of cytoplasmic Ca2+ signaling in response to different environmental stimuli. The recent set up of a toolkit of genetically encoded Ca2+ indicators, targeted to different chloroplast subcompartments (envelope, stroma, thylakoids) has helped to unravel the participation of chloroplasts in intracellular Ca2+ handling in resting conditions and during signal transduction. Intra-chloroplast Ca2+ signals have been demonstrated to occur in response to specific environmental stimuli, suggesting a role for these plant-unique organelles in transducing Ca2+-mediated stress signals. In this mini-review we present current knowledge of stimulus-specific intra-chloroplast Ca2+ transients, as well as recent advances in the identification and characterization of Ca2+-permeable channels/transporters localized at chloroplast membranes. In particular, the potential role played by cMCU, a chloroplast-localized member of the mitochondrial calcium uniporter (MCU) family, as component of plant environmental sensing is discussed in detail, taking into account some specific structural features of cMCU. In summary, the recent molecular identification of some players of chloroplast Ca2+ signaling has opened new avenues in this rapidly developing field and will hopefully allow a deeper understanding of the role of chloroplasts in shaping physiological responses in plants.
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Affiliation(s)
- Lorella Navazio
- Department of Biology, University of Padova, Padova, Italy
- Botanical Garden, University of Padova, Padova, Italy
| | - Elide Formentin
- Department of Biology, University of Padova, Padova, Italy
- Botanical Garden, University of Padova, Padova, Italy
| | - Laura Cendron
- Department of Biology, University of Padova, Padova, Italy
| | - Ildikò Szabò
- Department of Biology, University of Padova, Padova, Italy
- Botanical Garden, University of Padova, Padova, Italy
- *Correspondence: Ildikò Szabò,
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Niño-González M, Novo-Uzal E, Richardson DN, Barros PM, Duque P. More Transporters, More Substrates: The Arabidopsis Major Facilitator Superfamily Revisited. MOLECULAR PLANT 2019; 12:1182-1202. [PMID: 31330327 DOI: 10.1016/j.molp.2019.07.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2018] [Revised: 07/10/2019] [Accepted: 07/11/2019] [Indexed: 05/20/2023]
Abstract
The Major Facilitator Superfamily (MFS) is ubiquitous in living organisms and represents the largest group of secondary active membrane transporters. In plants, significant research efforts have focused on the role of specific families within the MFS, particularly those transporting macronutrients (C, N, and P) that constitute the vast majority of the members of this superfamily. Other MFS families remain less explored, although a plethora of additional substrates and physiological functions have been uncovered. Nevertheless, the lack of a systematic approach to analyzing the MFS as a whole has obscured the high diversity and versatility of these transporters. Here, we present a phylogenetic analysis of all annotated MFS domain-containing proteins encoded in the Arabidopsis thaliana genome and propose that this superfamily of transporters consists of 218 members, clustered in 22 families. In reviewing the available information regarding the diversity in biological functions and substrates of Arabidopsis MFS members, we provide arguments for intensified research on these membrane transporters to unveil the breadth of their physiological relevance, disclose the molecular mechanisms underlying their mode of action, and explore their biotechnological potential.
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Affiliation(s)
| | | | | | - Pedro M Barros
- Genomics of Plant Stress Unit, ITQB NOVA - Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, 2780-157 Oeiras, Portugal
| | - Paula Duque
- Instituto Gulbenkian de Ciência, 2780-156 Oeiras, Portugal.
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37
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How Plants Handle Trivalent (+3) Elements. Int J Mol Sci 2019; 20:ijms20163984. [PMID: 31426275 PMCID: PMC6719099 DOI: 10.3390/ijms20163984] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2019] [Revised: 08/12/2019] [Accepted: 08/13/2019] [Indexed: 12/31/2022] Open
Abstract
Plant development and fitness largely depend on the adequate availability of mineral elements in the soil. Most essential nutrients are available and can be membrane transported either as mono or divalent cations or as mono- or divalent anions. Trivalent cations are highly toxic to membranes, and plants have evolved different mechanisms to handle +3 elements in a safe way. The essential functional role of a few metal ions, with the possibility to gain a trivalent state, mainly resides in the ion's redox activity; examples are iron (Fe) and manganese. Among the required nutrients, the only element with +3 as a unique oxidation state is the non-metal, boron. However, plants also can take up non-essential trivalent elements that occur in biologically relevant concentrations in soils. Examples are, among others, aluminum (Al), chromium (Cr), arsenic (As), and antimony (Sb). Plants have evolved different mechanisms to take up and tolerate these potentially toxic elements. This review considers recent studies describing the transporters, and specific and unspecific channels in different cell compartments and tissues, thereby providing a global vision of trivalent element homeostasis in plants.
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38
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Vigani G, Solti ÏDM, Thomine SB, Philippar K. Essential and Detrimental - an Update on Intracellular Iron Trafficking and Homeostasis. PLANT & CELL PHYSIOLOGY 2019; 60:1420-1439. [PMID: 31093670 DOI: 10.1093/pcp/pcz091] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Accepted: 05/06/2019] [Indexed: 05/22/2023]
Abstract
Chloroplasts, mitochondria and vacuoles represent characteristic organelles of the plant cell, with a predominant function in cellular metabolism. Chloroplasts are the site of photosynthesis and therefore basic and essential for photoautotrophic growth of plants. Mitochondria produce energy during respiration and vacuoles act as internal waste and storage compartments. Moreover, chloroplasts and mitochondria are sites for the biosynthesis of various compounds of primary and secondary metabolism. For photosynthesis and energy generation, the internal membranes of chloroplasts and mitochondria are equipped with electron transport chains. To perform proper electron transfer and several biosynthetic functions, both organelles contain transition metals and here iron is by far the most abundant. Although iron is thus essential for plant growth and development, it becomes toxic when present in excess and/or in its free, ionic form. The harmful effect of the latter is caused by the generation of oxidative stress. As a consequence, iron transport and homeostasis have to be tightly controlled during plant growth and development. In addition to the corresponding transport and homeostasis proteins, the vacuole plays an important role as an intracellular iron storage and release compartment at certain developmental stages. In this review, we will summarize current knowledge on iron transport and homeostasis in chloroplasts, mitochondria and vacuoles. In addition, we aim to integrate the physiological impact of intracellular iron homeostasis on cellular and developmental processes.
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Affiliation(s)
- Gianpiero Vigani
- Plant Physiology Unit, Department of Life Sciences and Systems Biology, University of Turin, via Quarello 15/A, Turin I, Italy
| | - Ï Dï M Solti
- Department of Plant Physiology and Molecular Plant Biology, E�tv�s Lor�nd University, Budapest H, Hungary
| | - Sï Bastien Thomine
- Institut de Biologie Int�grative de la Cellule, CNRS, Avenue de la Terrasse, Gif-sur-Yvette, France
| | - Katrin Philippar
- Plant Biology, Center for Human- and Molecular Biology (ZHMB), Saarland University, Campus A2.4, Saarbr�cken D, Germany
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Ryan MH, Kaur P, Nazeri NK, Clode PL, Keeble-Gagnère G, Doolette AL, Smernik RJ, Van Aken O, Nicol D, Maruyama H, Ezawa T, Lambers H, Millar AH, Appels R. Globular structures in roots accumulate phosphorus to extremely high concentrations following phosphorus addition. PLANT, CELL & ENVIRONMENT 2019; 42:1987-2002. [PMID: 30734927 DOI: 10.1111/pce.13531] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2018] [Revised: 02/04/2019] [Accepted: 02/05/2019] [Indexed: 06/09/2023]
Abstract
Crops with improved uptake of fertilizer phosphorus (P) would reduce P losses and confer environmental benefits. We examined how P-sufficient 6-week-old soil-grown Trifolium subterraneum plants, and 2-week-old seedlings in solution culture, accumulated P in roots after inorganic P (Pi) addition. In contrast to our expectation that vacuoles would accumulate excess P, after 7 days, X-ray microanalysis showed that vacuolar [P] remained low (<12 mmol kg-1 ). However, in the plants after P addition, some cortex cells contained globular structures extraordinarily rich in P (often >3,000 mmol kg-1 ), potassium, magnesium, and sodium. Similar structures were evident in seedlings, both before and after P addition, with their [P] increasing threefold after P addition. Nuclear magnetic resonance (NMR) spectroscopy showed seedling roots accumulated Pi following P addition, and transmission electron microscopy (TEM) revealed large plastids. For seedlings, we demonstrated that roots differentially expressed genes after P addition using RNAseq mapped to the T. subterraneum reference genome assembly and transcriptome profiles. Among the most up-regulated genes after 4 hr was TSub_g9430.t1, which is similar to plastid envelope Pi transporters (PHT4;1, PHT4;4): expression of vacuolar Pi-transporter homologs did not change. We suggest that subcellular P accumulation in globular structures, which may include plastids, aids cytosolic Pi homeostasis under high-P availability.
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Affiliation(s)
- Megan H Ryan
- UWA School of Agriculture and Environment and Institute of Agriculture, The University of Western Australia, Crawley, Australia
| | - Parwinder Kaur
- UWA School of Agriculture and Environment and Institute of Agriculture, The University of Western Australia, Crawley, Australia
- Centre for Plant Genetics and Breeding and Institute of Agriculture, The University of Western Australia, Crawley, Australia
| | - Nazanin K Nazeri
- UWA School of Agriculture and Environment and Institute of Agriculture, The University of Western Australia, Crawley, Australia
| | - Peta L Clode
- Centre for Microscopy, Characterisation and Analysis and UWA School of Biological Sciences, The University of Western Australia, Crawley, Australia
| | - Gabriel Keeble-Gagnère
- Agriculture Victoria Research, Department of Jobs, Precincts and Regions, AgriBio, Bundoora, Australia
| | - Ashlea L Doolette
- School of Agriculture, Food and Wine and Waite Research Institute, The University of Adelaide, Waite Campus, Urrbrae, Australia
| | - Ronald J Smernik
- School of Agriculture, Food and Wine and Waite Research Institute, The University of Adelaide, Waite Campus, Urrbrae, Australia
| | - Olivier Van Aken
- ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, Australia
- Department of Biology, Lund University, Lund, Sweden
| | - Dion Nicol
- UWA School of Agriculture and Environment and Institute of Agriculture, The University of Western Australia, Crawley, Australia
- Department of Primary Industries and Regional Development, Western Australia, Dryland Research Institute, Merredin, Australia
| | - Hayato Maruyama
- Graduate School of Agriculture, Hokkaido University, Sapporo, Japan
| | - Tatsuhiro Ezawa
- Graduate School of Agriculture, Hokkaido University, Sapporo, Japan
| | - Hans Lambers
- UWA School of Biological Sciences and Institute of Agriculture, The University of Western Australia, Crawley, Australia
| | - A Harvey Millar
- ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, Australia
| | - Rudi Appels
- Agriculture Victoria Research, Department of Jobs, Precincts and Regions, AgriBio, Bundoora, Australia
- University of Melbourne, Bioscience, Parkville, Australia
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40
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Voith von Voithenberg L, Park J, Stübe R, Lux C, Lee Y, Philippar K. A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis. FRONTIERS IN PLANT SCIENCE 2019; 10:1264. [PMID: 31736987 PMCID: PMC6828968 DOI: 10.3389/fpls.2019.01264] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Accepted: 09/11/2019] [Indexed: 05/18/2023]
Abstract
During evolution, chloroplasts, which originated by endosymbiosis of a prokaryotic ancestor of today's cyanobacteria with a eukaryotic host cell, were established as the site for photosynthesis. Therefore, chloroplast organelles are loaded with transition metals including iron, copper, and manganese, which are essential for photosynthetic electron transport due to their redox capacity. Although transport, storage, and cofactor-assembly of metal ions in chloroplasts are tightly controlled and crucial throughout plant growth and development, knowledge on the molecular nature of chloroplast metal-transport proteins is still fragmentary. Here, we characterized the soluble, ATP-binding ABC-transporter subunits ABCI10 and ABCI11 in Arabidopsis thaliana, which show similarities to components of prokaryotic, multisubunit ABC transporters. Both ABCI10 and ABCI11 proteins appear to be strongly attached to chloroplast-intrinsic membranes, most likely inner envelopes for ABCI10 and possibly plastoglobuli for ABCI11. Loss of ABCI10 and ABCI11 gene products in Arabidopsis leads to extremely dwarfed, albino plants showing impaired chloroplast biogenesis and deregulated metal homeostasis. Further, we identified the membrane-intrinsic protein ABCI12 as potential interaction partner for ABCI10 in the inner envelope. Our results suggest that ABCI12 inserts into the chloroplast inner envelope membrane most likely with five predicted α-helical transmembrane domains and represents the membrane-intrinsic subunit of a prokaryotic-type, energy-coupling factor (ECF) ABC-transporter complex. In bacteria, these multisubunit ECF importers are widely distributed for the uptake of nickel and cobalt metal ions as well as for import of vitamins and several other metabolites. Therefore, we propose that ABCI10 (as the ATPase A-subunit) and ABCI12 (as the membrane-intrinsic, energy-coupling T-subunit) are part of a novel, chloroplast envelope-localized, AAT energy-coupling module of a prokaryotic-type ECF transporter, most likely involved in metal ion uptake.
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Affiliation(s)
| | - Jiyoung Park
- Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea
| | - Roland Stübe
- Plant Biochemistry and Physiology, Department of Biology I, LMU München, Planegg-Martinsried, Germany
| | - Christopher Lux
- Plant Biology, Center for Human and Molecular Biology (ZHMB), Saarland University, Saarbrücken, Germany
| | - Youngsook Lee
- Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea
| | - Katrin Philippar
- Plant Biology, Center for Human and Molecular Biology (ZHMB), Saarland University, Saarbrücken, Germany
- *Correspondence: Katrin Philippar,
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41
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Voith von Voithenberg L, Park J, Stübe R, Lux C, Lee Y, Philippar K. A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis. FRONTIERS IN PLANT SCIENCE 2019; 10:1264. [PMID: 31736987 DOI: 10.3389/fpls201901264] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Accepted: 09/11/2019] [Indexed: 05/22/2023]
Abstract
During evolution, chloroplasts, which originated by endosymbiosis of a prokaryotic ancestor of today's cyanobacteria with a eukaryotic host cell, were established as the site for photosynthesis. Therefore, chloroplast organelles are loaded with transition metals including iron, copper, and manganese, which are essential for photosynthetic electron transport due to their redox capacity. Although transport, storage, and cofactor-assembly of metal ions in chloroplasts are tightly controlled and crucial throughout plant growth and development, knowledge on the molecular nature of chloroplast metal-transport proteins is still fragmentary. Here, we characterized the soluble, ATP-binding ABC-transporter subunits ABCI10 and ABCI11 in Arabidopsis thaliana, which show similarities to components of prokaryotic, multisubunit ABC transporters. Both ABCI10 and ABCI11 proteins appear to be strongly attached to chloroplast-intrinsic membranes, most likely inner envelopes for ABCI10 and possibly plastoglobuli for ABCI11. Loss of ABCI10 and ABCI11 gene products in Arabidopsis leads to extremely dwarfed, albino plants showing impaired chloroplast biogenesis and deregulated metal homeostasis. Further, we identified the membrane-intrinsic protein ABCI12 as potential interaction partner for ABCI10 in the inner envelope. Our results suggest that ABCI12 inserts into the chloroplast inner envelope membrane most likely with five predicted α-helical transmembrane domains and represents the membrane-intrinsic subunit of a prokaryotic-type, energy-coupling factor (ECF) ABC-transporter complex. In bacteria, these multisubunit ECF importers are widely distributed for the uptake of nickel and cobalt metal ions as well as for import of vitamins and several other metabolites. Therefore, we propose that ABCI10 (as the ATPase A-subunit) and ABCI12 (as the membrane-intrinsic, energy-coupling T-subunit) are part of a novel, chloroplast envelope-localized, AAT energy-coupling module of a prokaryotic-type ECF transporter, most likely involved in metal ion uptake.
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Affiliation(s)
| | - Jiyoung Park
- Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea
| | - Roland Stübe
- Plant Biochemistry and Physiology, Department of Biology I, LMU München, Planegg-Martinsried, Germany
| | - Christopher Lux
- Plant Biology, Center for Human and Molecular Biology (ZHMB), Saarland University, Saarbrücken, Germany
| | - Youngsook Lee
- Department of Life Science, Pohang University of Science and Technology, Pohang, South Korea
| | - Katrin Philippar
- Plant Biology, Center for Human and Molecular Biology (ZHMB), Saarland University, Saarbrücken, Germany
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42
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Monroe JD, Pope LE, Breault JS, Berndsen CE, Storm AR. Quaternary Structure, Salt Sensitivity, and Allosteric Regulation of β-AMYLASE2 From Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2018; 9:1176. [PMID: 30154813 PMCID: PMC6102588 DOI: 10.3389/fpls.2018.01176] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Accepted: 07/23/2018] [Indexed: 06/08/2023]
Abstract
The β-amylase family in Arabidopsis thaliana has nine members, four of which are both plastid-localized and, based on active-site sequence conservation, potentially capable of hydrolyzing starch to maltose. We recently reported that one of these enzymes, BAM2, is catalytically active in the presence of physiological levels of KCl, exhibits sigmoidal kinetics with a Hill coefficient of over 3, is tetrameric, has a putative secondary binding site (SBS) for starch, and is highly co-expressed with other starch metabolizing enzymes. Here we generated a tetrameric homology model of Arabidopsis BAM2 that is a dimer of dimers in which the putative SBSs of two subunits form a deep groove between the subunits. To validate this model and identify key residues, we generated a series of mutations and characterized the purified proteins. (1) Three point mutations in the putative subunit interfaces disrupted tetramerization; two that interfered with the formation of the starch-binding groove were largely inactive, whereas a third mutation prevented pairs of dimers from forming and was active. (2) The model revealed that a 30-residue N-terminal acidic region, not found in other BAMs, appears to form part of the putative starch-binding groove. A mutant lacking this acidic region was active and did not require KCl for activity. (3) A conserved tryptophan residue in the SBS is necessary for activation and may form π-bonds with sugars in starch. (4) Sequence alignments revealed a conserved serine residue next to one of the catalytic glutamic acid residues, that is a conserved glycine in all other active BAMs. The serine side chain points away from the active site and toward the putative starch-binding groove. Mutating the serine in BAM2 to a glycine resulted in an enzyme with a VMax similar to that of the wild type enzyme but with a 7.5-fold lower KM for soluble starch. Interestingly, the mutant no longer exhibited sigmoidal kinetics, suggesting that allosteric communication between the putative SBS and the active site was disrupted. These results confirm the unusual structure and function of this widespread enzyme, and suggest that our understanding of starch degradation in plants is incomplete.
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Affiliation(s)
- Jonathan D. Monroe
- Department of Biology, James Madison University, Harrisonburg, VA, United States
| | - Lauren E. Pope
- Department of Biology, James Madison University, Harrisonburg, VA, United States
| | - Jillian S. Breault
- Department of Biology, James Madison University, Harrisonburg, VA, United States
| | - Christopher E. Berndsen
- Department of Chemistry and Biochemistry, James Madison University, Harrisonburg, VA, United States
| | - Amanda R. Storm
- Department of Biology, Western Carolina University, Cullowhee, NC, United States
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43
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Zhang B, Zhang C, Liu C, Jing Y, Wang Y, Jin L, Yang L, Fu A, Shi J, Zhao F, Lan W, Luan S. Inner Envelope CHLOROPLAST MANGANESE TRANSPORTER 1 Supports Manganese Homeostasis and Phototrophic Growth in Arabidopsis. MOLECULAR PLANT 2018; 11:943-954. [PMID: 29734003 DOI: 10.1016/j.molp.2018.04.007] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 04/19/2018] [Accepted: 04/23/2018] [Indexed: 05/18/2023]
Abstract
Manganese (Mn) is an essential catalytic metal in the Mn-cluster that oxidizes water to produce oxygen during photosynthesis. However, the transport protein(s) responsible for Mn2+ import into the chloroplast remains unknown. Here, we report the characterization of Arabidopsis CMT1 (Chloroplast Manganese Transporter 1), an evolutionarily conserved protein in the Uncharacterized Protein Family 0016 (UPF0016), that is required for manganese accumulation into the chloroplast. CMT1 is expressed primarily in green tissues, and its encoded product is localized in the inner envelope membrane of the chloroplast. Disruption of CMT1 in the T-DNA insertional mutant cmt1-1 resulted in stunted plant growth, defective thylakoid stacking, and severe reduction of photosystem II complexes and photosynthetic activity. Consistent with reduced oxygen evolution capacity, the mutant chloroplasts contained less manganese than the wild-type ones. In support of its function as a Mn transporter, CMT1 protein supported the growth and enabled Mn2+ accumulation in the yeast cells of Mn2+-uptake deficient mutant (Δsmf1). Taken together, our results indicate that CMT1 functions as an inner envelope Mn transporter responsible for chloroplast Mn2+ uptake.
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Affiliation(s)
- Bin Zhang
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China; The Key Laboratory of Western Resources Biology and Biological Technology, College of Life Sciences, Northwest University, Xi'an, China
| | - Chi Zhang
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China; The Key Laboratory of Western Resources Biology and Biological Technology, College of Life Sciences, Northwest University, Xi'an, China
| | - Congge Liu
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China
| | - Yanping Jing
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China
| | - Yuan Wang
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China
| | - Ling Jin
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China
| | - Lei Yang
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China
| | - Aigen Fu
- The Key Laboratory of Western Resources Biology and Biological Technology, College of Life Sciences, Northwest University, Xi'an, China
| | - Jisen Shi
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, Key Laboratory of Forest Genetics and Biotechnology, Nanjing Forestry University, Nanjing 210037, China
| | - Fugeng Zhao
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China
| | - Wenzhi Lan
- Nanjing University-Nanjing Forestry University Joint Institute for Plant Molecular Biology, College of Life Sciences, Nanjing University, Nanjing 210093, China.
| | - Sheng Luan
- Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720, USA.
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44
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Marchand J, Heydarizadeh P, Schoefs B, Spetea C. Ion and metabolite transport in the chloroplast of algae: lessons from land plants. Cell Mol Life Sci 2018; 75:2153-2176. [PMID: 29541792 PMCID: PMC5948301 DOI: 10.1007/s00018-018-2793-0] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2017] [Revised: 03/01/2018] [Accepted: 03/07/2018] [Indexed: 12/28/2022]
Abstract
Chloroplasts are endosymbiotic organelles and play crucial roles in energy supply and metabolism of eukaryotic photosynthetic organisms (algae and land plants). They harbor channels and transporters in the envelope and thylakoid membranes, mediating the exchange of ions and metabolites with the cytosol and the chloroplast stroma and between the different chloroplast subcompartments. In secondarily evolved algae, three or four envelope membranes surround the chloroplast, making more complex the exchange of ions and metabolites. Despite the importance of transport proteins for the optimal functioning of the chloroplast in algae, and that many land plant homologues have been predicted, experimental evidence and molecular characterization are missing in most cases. Here, we provide an overview of the current knowledge about ion and metabolite transport in the chloroplast from algae. The main aspects reviewed are localization and activity of the transport proteins from algae and/or of homologues from other organisms including land plants. Most chloroplast transporters were identified in the green alga Chlamydomonas reinhardtii, reside in the envelope and participate in carbon acquisition and metabolism. Only a few identified algal transporters are located in the thylakoid membrane and play role in ion transport. The presence of genes for putative transporters in green algae, red algae, diatoms, glaucophytes and cryptophytes is discussed, and roles in the chloroplast are suggested. A deep knowledge in this field is required because algae represent a potential source of biomass and valuable metabolites for industry, medicine and agriculture.
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Affiliation(s)
- Justine Marchand
- Metabolism, Bioengineering of Microalgal Molecules and Applications (MIMMA), Mer Molécules Santé, IUML, FR 3473 CNRS, Le Mans University, 72000, Le Mans, France
| | - Parisa Heydarizadeh
- Metabolism, Bioengineering of Microalgal Molecules and Applications (MIMMA), Mer Molécules Santé, IUML, FR 3473 CNRS, Le Mans University, 72000, Le Mans, France
| | - Benoît Schoefs
- Metabolism, Bioengineering of Microalgal Molecules and Applications (MIMMA), Mer Molécules Santé, IUML, FR 3473 CNRS, Le Mans University, 72000, Le Mans, France.
| | - Cornelia Spetea
- Department of Biological and Environmental Sciences, University of Gothenburg, 40530, Göteborg, Sweden.
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45
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Costa A, Navazio L, Szabo I. The contribution of organelles to plant intracellular Calcium signalling. JOURNAL OF EXPERIMENTAL BOTANY 2018; 69:4996169. [PMID: 29767757 DOI: 10.1093/jxb/ery185] [Citation(s) in RCA: 69] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Indexed: 05/18/2023]
Abstract
Calcium (Ca2+) is among the most important intracellular messengers in living organisms. Understanding of the players and dynamics of Ca2+ signalling pathways in plants may help to unravel the molecular basis of their exceptional flexibility to respond and to adapt to different stimuli. In the present review we focus on new tools that have recently revolutionized our view of organellar Ca2+ signalling as well as on the current knowledge regarding the pathways mediating Ca2+ fluxes across intracellular membranes. The contribution of organelles and cellular subcompartments to the orchestrated response via Ca2+ signalling within a cell is also discussed, underlining the fact that one of the greatest challenges in the field is the elucidation of how influx and efflux Ca2+ transporters/channels are regulated in a concerted manner to translate specific information into a Ca2+ signature.
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Affiliation(s)
- Alex Costa
- Department of Biosciences, University of Milan, Via G. Celoria, Milan, Italy
- Institute of Biophysics, Consiglio Nazionale delle Ricerche, Via G. Celoria, Milan, Italy
| | - Lorella Navazio
- Department of Biology, University of Padova, Via U. Bassi, Padova, Italy
- Botanical Garden, University of Padova, Via Orto Botanico, Padova, Italy
| | - Ildiko Szabo
- Department of Biology, University of Padova, Via U. Bassi, Padova, Italy
- Botanical Garden, University of Padova, Via Orto Botanico, Padova, Italy
- Institute of Neurosciences, Consiglio Nazionale delle Ricerche, Via U. Bassi, Padova, Italy
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Muhammad I, Jing XQ, Shalmani A, Ali M, Yi S, Gan PF, Li WQ, Liu WT, Chen KM. Comparative in Silico Analysis of Ferric Reduction Oxidase (FRO) Genes Expression Patterns in Response to Abiotic Stresses, Metal and Hormone Applications. Molecules 2018; 23:molecules23051163. [PMID: 29757203 PMCID: PMC6099960 DOI: 10.3390/molecules23051163] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Revised: 05/04/2018] [Accepted: 05/09/2018] [Indexed: 02/01/2023] Open
Abstract
The ferric reduction oxidase (FRO) gene family is involved in various biological processes widely found in plants and may play an essential role in metal homeostasis, tolerance and intricate signaling networks in response to a number of abiotic stresses. Our study describes the identification, characterization and evolutionary relationships of FRO genes families. Here, total 50 FRO genes in Plantae and 15 ‘FRO like’ genes in non-Plantae were retrieved from 16 different species. The entire FRO genes have been divided into seven clades according to close similarity in biological and functional behavior. Three conserved domains were common in FRO genes while in two FROs sub genome have an extra NADPH-Ox domain, separating the function of plant FROs. OsFRO1 and OsFRO7 genes were expressed constitutively in rice plant. Real-time RT-PCR analysis demonstrated that the expression of OsFRO1 was high in flag leaf, and OsFRO7 gene expression was maximum in leaf blade and flag leaf. Both genes showed vigorous expressions level in response to different abiotic and hormones treatments. Moreover, the expression of both genes was also substantial under heavy metal stresses. OsFRO1 gene expression was triggered following 6 h under Zn, Pb, Co and Ni treatments, whereas OsFRO7 gene expression under Fe, Pb and Ni after 12 h, Zn and Cr after 6 h, and Mn and Co after 3 h treatments. These findings suggest the possible involvement of both the genes under abiotic and metal stress and the regulation of phytohormones. Therefore, our current work may provide the foundation for further functional characterization of rice FRO genes family.
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Affiliation(s)
- Izhar Muhammad
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Xiu-Qing Jing
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Abdullah Shalmani
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Muhammad Ali
- College of Horticulture, Northwest A&F University, Yangling 712100, China.
| | - Shi Yi
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Peng-Fei Gan
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Wen-Qiang Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Wen-Ting Liu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
| | - Kun-Ming Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, China.
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Sukhova E, Mudrilov M, Vodeneev V, Sukhov V. Influence of the variation potential on photosynthetic flows of light energy and electrons in pea. PHOTOSYNTHESIS RESEARCH 2018; 136:215-228. [PMID: 29086893 DOI: 10.1007/s11120-017-0460-1] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2017] [Accepted: 10/23/2017] [Indexed: 05/17/2023]
Abstract
Local damage (mainly burning, heating, and mechanical wounding) induces propagation of electrical signals, namely, variation potentials, which are important signals during the life of plants that regulate different physiological processes, including photosynthesis. It is known that the variation potential decreases the rate of CO2 assimilation by the Calvin-Benson cycle; however, its influence on light reactions has been poorly investigated. The aim of our work was to investigate the influence of the variation potential on the light energy flow that is absorbed, trapped and dissipated per active reaction centre in photosystem II and on the flow of electrons through the chloroplast electron transport chain. We analysed chlorophyll fluorescence in pea leaves using JIP-test and PAM-fluorometry; we also investigated delayed fluorescence. The electrical signals were registered using extracellular electrodes. We showed that the burning-induced variation potential stimulated a nonphotochemical loss of energy in photosystem II under dark conditions. It was also shown that the variation potential gradually increased the flow of light energy absorbed, trapped and dissipated by photosystem II. These changes were likely caused by an increase in the fraction of absorbed light distributed to photosystem II. In addition, the variation potential induced a transient increase in electron flow through the photosynthetic electron transport chain. Some probable mechanisms for the influence of the variation potential on the light reactions of photosynthesis (including the potential role of intracellular pH decrease) are discussed in the work.
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Affiliation(s)
- Ekaterina Sukhova
- Department of Biophysics, N.I. Lobachevsky State University of Nizhny Novgorod, Gagarin Avenue, 23, Nizhny Novgorod, Russia, 603950
| | - Maxim Mudrilov
- Department of Biophysics, N.I. Lobachevsky State University of Nizhny Novgorod, Gagarin Avenue, 23, Nizhny Novgorod, Russia, 603950
| | - Vladimir Vodeneev
- Department of Biophysics, N.I. Lobachevsky State University of Nizhny Novgorod, Gagarin Avenue, 23, Nizhny Novgorod, Russia, 603950
| | - Vladimir Sukhov
- Department of Biophysics, N.I. Lobachevsky State University of Nizhny Novgorod, Gagarin Avenue, 23, Nizhny Novgorod, Russia, 603950.
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Zhao C, Haigh AM, Holford P, Chen ZH. Roles of Chloroplast Retrograde Signals and Ion Transport in Plant Drought Tolerance. Int J Mol Sci 2018; 19:E963. [PMID: 29570668 PMCID: PMC5979362 DOI: 10.3390/ijms19040963] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2017] [Revised: 03/18/2018] [Accepted: 03/20/2018] [Indexed: 01/09/2023] Open
Abstract
Worldwide, drought affects crop yields; therefore, understanding plants' strategies to adapt to drought is critical. Chloroplasts are key regulators of plant responses, and signals from chloroplasts also regulate nuclear gene expression during drought. However, the interactions between chloroplast-initiated retrograde signals and ion channels under stress are still not clear. In this review, we summarise the retrograde signals that participate in regulating plant stress tolerance. We compare chloroplastic transporters that modulate retrograde signalling through retrograde biosynthesis or as critical components in retrograde signalling. We also discuss the roles of important plasma membrane and tonoplast ion transporters that are involved in regulating stomatal movement. We propose how retrograde signals interact with ion transporters under stress.
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Affiliation(s)
- Chenchen Zhao
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Anthony M Haigh
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Paul Holford
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia.
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia.
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Abstract
Plastids are semiautonomous organelles like mitochondria, and derive from a cyanobacterial ancestor that was engulfed by a host cell. During evolution, they have recruited proteins originating from the nuclear genome, and only parts of their ancestral metabolic properties were conserved and optimized to limit functional redundancy with other cell compartments. Furthermore, large disparities in metabolic functions exist among various types of plastids, and the characterization of their various metabolic properties is far from being accomplished. In this review, we provide an overview of the main functions, known to be achieved by plastids or shared by plastids and other compartments of the cell. In short, plastids appear at the heart of all main plant functions.
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Affiliation(s)
- Norbert Rolland
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Commissariat à l'Energie Atomique et aux Energies Alternatives, Grenoble, France.
| | - Imen Bouchnak
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Commissariat à l'Energie Atomique et aux Energies Alternatives, Grenoble, France
| | - Lucas Moyet
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Commissariat à l'Energie Atomique et aux Energies Alternatives, Grenoble, France
| | - Daniel Salvi
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Commissariat à l'Energie Atomique et aux Energies Alternatives, Grenoble, France
| | - Marcel Kuntz
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Commissariat à l'Energie Atomique et aux Energies Alternatives, Grenoble, France
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50
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Gomez-Casati DF, Busi MV, Pagani MA. Plant Frataxin in Metal Metabolism. FRONTIERS IN PLANT SCIENCE 2018; 9:1706. [PMID: 30519254 PMCID: PMC6258813 DOI: 10.3389/fpls.2018.01706] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2018] [Accepted: 11/02/2018] [Indexed: 05/08/2023]
Abstract
Frataxin is a highly conserved protein from prokaryotes to eukaryotes. Several functions related to iron metabolism have been postulated for this protein, including Fe-S cluster and heme synthesis, response to oxidative damage and oxidative phosphorylation. In plants, the presence of one or two isoforms of this protein with dual localization in mitochondria and chloroplasts has been reported. Frataxin deficiency affects iron metabolism in both organelles, leading to an impairment of mitochondrial respiration, and chlorophyll and photosynthetic electron transport deficiency in chloroplasts. In addition, plant frataxins can react with Cu2+ ions and dimerize, which causes the reduction of free Cu ions. This could provide an additional defense mechanism against the oxidation of Fe-S groups by Cu ions. While there is a consensus on the involvement of frataxin in iron homeostasis in most organisms, the interaction of plant frataxins with Cu ions, the presence of different isoforms, and/or the localization in two plant organelles suggest that this protein might have additional functions in vegetal tissues.
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