1
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Wei H, Wang X, Zhang Z, Yang L, Zhang Q, Li Y, He H, Chen D, Zhang B, Zheng C, Leng Y, Cao X, Cui Y, Shi C, Liu Y, Lv Y, Ma J, He W, Liu X, Xu Q, Yuan Q, Yu X, Wang T, Qian H, Li X, Zhang B, Zhang H, Chen W, Guo M, Dai X, Wang Y, Zheng X, Guo L, Xie X, Qian Q, Shang L. Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice. Natl Sci Rev 2024; 11:nwae043. [PMID: 38650829 PMCID: PMC11034615 DOI: 10.1093/nsr/nwae043] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 01/21/2024] [Accepted: 01/24/2024] [Indexed: 04/25/2024] Open
Abstract
For sessile plants, gene expression plays a pivotal role in responding to salinity stress by activating or suppressing specific genes. However, our knowledge of genetic variations governing gene expression in response to salt stress remains limited in natural germplasm. Through transcriptome analysis of the Global Mini-Core Rice Collection consisting of a panel of 202 accessions, we identified 22 345 and 27 610 expression quantitative trait loci associated with the expression of 7787 and 9361 eGenes under normal and salt-stress conditions, respectively, leveraging the super pan-genome map. Notably, combined with genome-wide association studies, we swiftly pinpointed the potential candidate gene STG5-a major salt-tolerant locus known as qSTS5. Intriguingly, STG5 is required for maintaining Na+/K+ homeostasis by directly regulating the transcription of multiple members of the OsHKT gene family. Our study sheds light on how genetic variants influence the dynamic changes in gene expression responding to salinity stress and provides a valuable resource for the mining of salt-tolerant genes in the future.
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Affiliation(s)
- Hua Wei
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Xianmeng Wang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Zhipeng Zhang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Longbo Yang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Qianqian Zhang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Yilin Li
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Huiying He
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Dandan Chen
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Bin Zhang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Chongke Zheng
- Institute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China
| | - Yue Leng
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Xinglan Cao
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Yan Cui
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Chuanlin Shi
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Yifan Liu
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Yang Lv
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - Jie Ma
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - Wenchuang He
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Xiangpei Liu
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Qiang Xu
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Qiaoling Yuan
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Xiaoman Yu
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Tianyi Wang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Hongge Qian
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Xiaoxia Li
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Bintao Zhang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Hong Zhang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Wu Chen
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Mingliang Guo
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Xiaofan Dai
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Yuexing Wang
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - Xiaoming Zheng
- National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Longbiao Guo
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
| | - Xianzhi Xie
- Institute of Wetland Agriculture and Ecology, Shandong Academy of Agricultural Sciences, Jinan 250100, China
| | - Qian Qian
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
- State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, China
- Yazhouwan National Laboratory, Sanya 572024, China
| | - Lianguang Shang
- Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
- Yazhouwan National Laboratory, Sanya 572024, China
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2
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Xiao X, Lang D, Yong J, Zhang X. Bacillus cereus G2 alleviate salt stress in Glycyrrhiza uralensis Fisch. by balancing the downstream branches of phenylpropanoids and activating flavonoid biosynthesis. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 273:116129. [PMID: 38430580 DOI: 10.1016/j.ecoenv.2024.116129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 01/11/2024] [Accepted: 02/18/2024] [Indexed: 03/04/2024]
Abstract
The salinity environment is one of the biggest threats to Glycyrrhiza uralensis Fisch. (G. uralensis) growth, resulting from the oxidative stress caused by excess reactive oxygen species (ROS). Flavonoids are the main pharmacodynamic composition and help maintain ROS homeostasis and mitigate oxidative damage in G. uralensis in the salinity environment. To investigate whether endophytic Bacillus cereus G2 can improve the salt-tolerance of G. uralensis through controlling flavonoid biosynthesis, the transcriptomic and physiological analysis of G. uralensis treated by G2 in the saline environment was conducted, focused on flavonoid biosynthesis-related pathways. Results uncovered that salinity inhibited flavonoids synthesis by decreasing the activities of phenylalanine ammonialyase (PAL) and 4-coumarate-CoA ligase (4CL) (42% and 39%, respectively) due to down-regulated gene Glyur000910s00020578 at substrate level, and then decreasing the activities of chalcone isomerase (CHI) and chalcone synthase (CHS) activities (50% and 42%, respectively) due to down-regulated genes Glyur006062s00044203 and Glyur000051s00003431, further decreasing isoliquiritigenin content by 53%. However, salt stress increased liquiritin content by 43%, which might be a protective mechanism of salt-treated G. uralensis seedlings. Interestingly, G2 enhanced PAL activity by 27% whereas reduced trans-cinnamate 4-monooxygenase (C4H) activity by 43% which could inhibit lignin biosynthesis but promote flavonoid biosynthesis of salt-treated G. uralensis at the substrate level. G2 decreased shikimate O-hydroxycinnamoyltransferase (HCT) activity by 35%, increased CHS activity by 54% through up-regulating the gene Glyur000051s00003431 encoding CHS, and increased CHI activity by 72%, thereby decreasing lignin (34%) and liquiritin (24%) content, but increasing isoliquiritigenin content (35%), which could mitigate oxidative damage and changed salt-tolerance mechanism of G. uralensis.
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Affiliation(s)
- Xiang Xiao
- College of Pharmacy, Ningxia Medical University, Yinchuan 750004, China
| | - Duoyong Lang
- College of Basic Medicine, Ningxia Medical University, Yinchuan 750004, China
| | - Jingjiao Yong
- College of Pharmacy, Ningxia Medical University, Yinchuan 750004, China
| | - Xinhui Zhang
- College of Pharmacy, Ningxia Medical University, Yinchuan 750004, China; Ningxia Engineering and Technology Research Center of Regional Characterizistic Traditional Chinese Medicine, Ningxia Collaborative Innovation Center of Regional Characterizistic Traditional Chinese Medicine, Key Laboratory of Ningxia Minority Medicine Modernization, Ministry of Education, Yinchuan 750004, China.
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3
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Gámez-Arjona F, Park HJ, García E, Aman R, Villalta I, Raddatz N, Carranco R, Ali A, Ali Z, Zareen S, De Luca A, Leidi EO, Daniel-Mozo M, Xu ZY, Albert A, Kim WY, Pardo JM, Sánchez-Rodriguez C, Yun DJ, Quintero FJ. Inverse regulation of SOS1 and HKT1 protein localization and stability by SOS3/CBL4 in Arabidopsis thaliana. Proc Natl Acad Sci U S A 2024; 121:e2320657121. [PMID: 38386704 PMCID: PMC10907282 DOI: 10.1073/pnas.2320657121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Accepted: 01/12/2024] [Indexed: 02/24/2024] Open
Abstract
To control net sodium (Na+) uptake, Arabidopsis plants utilize the plasma membrane (PM) Na+/H+ antiporter SOS1 to achieve Na+ efflux at the root and Na+ loading into the xylem, and the channel-like HKT1;1 protein that mediates the reverse flux of Na+ unloading off the xylem. Together, these opposing transport systems govern the partition of Na+ within the plant yet they must be finely co-regulated to prevent a futile cycle of xylem loading and unloading. Here, we show that the Arabidopsis SOS3 protein acts as the molecular switch governing these Na+ fluxes by favoring the recruitment of SOS1 to the PM and its subsequent activation by the SOS2/SOS3 kinase complex under salt stress, while commanding HKT1;1 protein degradation upon acute sodic stress. SOS3 achieves this role by direct and SOS2-independent binding to previously unrecognized functional domains of SOS1 and HKT1;1. These results indicate that roots first retain moderate amounts of salts to facilitate osmoregulation, yet when sodicity exceeds a set point, SOS3-dependent HKT1;1 degradation switches the balance toward Na+ export out of the root. Thus, SOS3 functionally links and co-regulates the two major Na+ transport systems operating in vascular plants controlling plant tolerance to salinity.
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Affiliation(s)
- Francisco Gámez-Arjona
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
- Department of Biology, ETH Zurich, Zurich8092, Switzerland
| | - Hee Jin Park
- Department of Biomedical Science and Engineering, Konkuk University, Seoul05029, South Korea
- Department of Biological Sciences, Chonnam National University, Gwangju61186, Korea
| | - Elena García
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
| | - Rashid Aman
- Laboratory for Genome Engineering and Synthetic Biology, King Abdullah University of Science and Technology, Thuwal23955-6900, Saudi Arabia
| | - Irene Villalta
- Institut de Recherche sur la Biologie de l’Insecte, Université de Tours, Tours37200, France
| | - Natalia Raddatz
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
| | - Raul Carranco
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
| | - Akhtar Ali
- Department of Biomedical Science and Engineering, Konkuk University, Seoul05029, South Korea
| | - Zahir Ali
- Laboratory for Genome Engineering and Synthetic Biology, King Abdullah University of Science and Technology, Thuwal23955-6900, Saudi Arabia
| | - Shah Zareen
- Department of Biomedical Science and Engineering, Konkuk University, Seoul05029, South Korea
| | - Anna De Luca
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
| | - Eduardo O. Leidi
- Instituto de Recursos Naturales y Agrobiología, Consejo Superior de Investigaciones Cientificas, Seville41012, Spain
| | - Miguel Daniel-Mozo
- Instituto de Química Física Blas Cabrera, Consejo Superior de Investigaciones Científicas, Madrid28006, Spain
| | - Zheng-Yi Xu
- Key Laboratory of Molecular Epigenetics, Northeast Normal University, Changchun130024, China
| | - Armando Albert
- Instituto de Química Física Blas Cabrera, Consejo Superior de Investigaciones Científicas, Madrid28006, Spain
| | - Woe-Yeon Kim
- Division of Applied Life Science (BK21 Program), Research Institute of Life Sciences, Gyeongsang National University, Jinju660-701, South Korea
| | - Jose M. Pardo
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
| | - Clara Sánchez-Rodriguez
- Department of Biology, ETH Zurich, Zurich8092, Switzerland
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid–Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (CSIC), Pozuelo de Alarcón28223, Spain
| | - Dae-Jin Yun
- Department of Biomedical Science and Engineering, Konkuk University, Seoul05029, South Korea
| | - Francisco J. Quintero
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Cientificas and University of Seville, Seville41092, Spain
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Hou J, Wan H, Liang K, Cui B, Ma Y, Chen Y, Liu J, Wang Y, Liu X, Zhang J, Wei Z, Liu F. Biochar amendment combined with partial root-zone drying irrigation alleviates salinity stress and improves root morphology and water use efficiency in cotton plant. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 904:166978. [PMID: 37704141 DOI: 10.1016/j.scitotenv.2023.166978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 09/04/2023] [Accepted: 09/08/2023] [Indexed: 09/15/2023]
Abstract
An adsorption experiment and a pot experiment were executed in order to explore the mechanisms by which biochar amendment in combination with reduced irrigation affects sodium and potassium uptake, root morphology, water use efficiency, and salinity tolerance of cotton plants. In the adsorption experiment, ten NaCl concentration gradients (0, 50, 100, 150, 200, 250, 300, 350, 400, and 500 mM) were set for testing isotherm adsorption of Na+ by biochar. It was found that the isotherms of Na+ adsorption by wheat straw biochar (WSP) and softwood biochar (SWP) were in accordance with the Langmuir isotherm model, and the Na+ adsorption ability of WSP (55.20 mg g-1) was superior to that of SWP (47.38 mg g-1). The pot experiment consisted three factors, viz., three biochar amendments (no biochar, WSP, and SWP), three irrigation strategies (deficit irrigation, partial root-zone drying irrigation - PRD, full irrigation), and two NaCl concentrations gradients (0 mM and 200 mM). The findings indicated that salinity stress lowered K+ concentration, root length, root surface area, and root volume (RV), but increased Na+ concentration, root average diameter, and root tissue density. However, biochar amendment decreased Na+ concentration, increased K+ concentration, and improved root morphology. In particular, the combination of WSP and PRD increased K+/Na+ ratio, RV, root weight density, root surface area density, water use efficiency, and partial factor productivity under salt stress, which can be a promising strategy to cope with drought and salinity stress in cotton production.
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Affiliation(s)
- Jingxiang Hou
- College of Water Resources and Architectural Engineering, Northwest A&F University, Weihui Road 23, 712100 Yangling, Shaanxi, China; Department of Plant and Environmental Science, Faculty of Science, University of Copenhagen, Højbakkegård Allé 13, DK-2630 Tåstrup, Denmark; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Heng Wan
- College of Water Resources and Architectural Engineering, Northwest A&F University, Weihui Road 23, 712100 Yangling, Shaanxi, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling, Shaanxi 712100, China; Soil Physics and Land Management Group, Wageningen University, P.O. Box 47, Wageningen, 6700 AA, Netherlands
| | - Kehao Liang
- Department of Plant and Environmental Science, Faculty of Science, University of Copenhagen, Højbakkegård Allé 13, DK-2630 Tåstrup, Denmark
| | - Bingjing Cui
- College of Water Resources and Architectural Engineering, Northwest A&F University, Weihui Road 23, 712100 Yangling, Shaanxi, China; Department of Plant and Environmental Science, Faculty of Science, University of Copenhagen, Højbakkegård Allé 13, DK-2630 Tåstrup, Denmark; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yingying Ma
- School of Ecology and Environment, Northwestern Polytechnical University, Xi'an, Shaanxi 710129, China
| | - Yiting Chen
- Department of Plant and Environmental Science, Faculty of Science, University of Copenhagen, Højbakkegård Allé 13, DK-2630 Tåstrup, Denmark
| | - Jie Liu
- College of Water Resources and Architectural Engineering, Northwest A&F University, Weihui Road 23, 712100 Yangling, Shaanxi, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yin Wang
- College of Resources and Environmental Sciences, Jilin Agricultural University, Changchun 130118, Jilin, China
| | - Xuezhi Liu
- School of Civil and Hydraulic Engineering, Ningxia University, Yinchuan 750021, China
| | - Jiarui Zhang
- College of Water Resources and Architectural Engineering, Northwest A&F University, Weihui Road 23, 712100 Yangling, Shaanxi, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Zhenhua Wei
- College of Water Resources and Architectural Engineering, Northwest A&F University, Weihui Road 23, 712100 Yangling, Shaanxi, China; Key Laboratory of Agricultural Soil and Water Engineering in Arid and Semiarid Areas, Ministry of Education, Northwest A&F University, Yangling, Shaanxi 712100, China.
| | - Fulai Liu
- Department of Plant and Environmental Science, Faculty of Science, University of Copenhagen, Højbakkegård Allé 13, DK-2630 Tåstrup, Denmark.
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5
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López-Serrano L, Martínez-Cuenca MR, López-Galarza S, Calatayud Á. Differential gene expression patterns and physiological responses improve adaptation to high salinity concentration in pepper accessions. PHYSIOLOGIA PLANTARUM 2023; 175:e14090. [PMID: 38148183 DOI: 10.1111/ppl.14090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Revised: 10/22/2023] [Accepted: 10/30/2023] [Indexed: 12/28/2023]
Abstract
High salinity decreases the productivity of crops worldwide. Pepper is particularly sensitive to high salt concentrations. Herein, we subjected three tolerant pepper accessions (C12, B14 and A25) to high sodium chloride concentration (70 mM NaCl). The aerial and root biomass, leaf and root osmotic potential (Ψπ ), Na+ , Cl- , K+ and proline concentrations and the relative expression of the putative genes CaSOS1, CaHKT1, three CaNHXs and CaP5CS were measured. Different salinity tolerance strategies depending on the pepper accession were identified. In C12, tolerance was attributed to the accumulation of Na+ in vacuoles and endosomes by the activation of vacuolar CaNHXs genes and the reduction in Ψπ ; additionally, the activation of CaHKT1 and CaSOS1 in leaves and roots moved and accumulated Na+ ions in the xylem and xylem parenchyma cells (XPC) as well as expulsed it out of the root cells. A25 accession, on the contrary, was specialized in compartmentalizing Na+ ions in root and leaf vacuoles and root XPC by the up-regulation of CaNHXs and CaHKT1, respectively, avoiding a toxic accumulation in leaves. Finally, B14 accession moved and accumulated Na+ in xylem and XPC, reducing its concentration in roots by the activation of CaSOS1 and CaHKT1. This study shade light on different tolerance mechanisms of pepper plants to overcome salt stress.
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Affiliation(s)
- Lidia López-Serrano
- Horticulture Department, Valencian Institute for Agricultural Research, Valencia, Spain
| | | | | | - Ángeles Calatayud
- Horticulture Department, Valencian Institute for Agricultural Research, Valencia, Spain
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6
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Bayomy HM, Alamri ES, Alharbi BM, Foudah SH, Genaidy EA, Atteya AK. Response of Moringa oleifera trees to salinity stress conditions in Tabuk region, Kingdom of Saudi Arabia. Saudi J Biol Sci 2023; 30:103810. [PMID: 37766885 PMCID: PMC10519853 DOI: 10.1016/j.sjbs.2023.103810] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Revised: 08/22/2023] [Accepted: 09/09/2023] [Indexed: 09/29/2023] Open
Abstract
Moringa oleifera is an amazing tree with various applications. Salinity is a world major barrier to crop productivity. This study was conducted to investigate salinity and seaweed extract's effect on Moringa oleifera's growth and yields. Measurements were made of growth characteristics, fresh and dried leaf, inflorescence, mature pod and seed weight, and yield per tree, as well as chemical parameters. Seasons had no substantial effect on any of these traits. In terms of seaweed concentrations, the treatment containing 20% seaweed outperformed the treatment containing 0% seaweed in all measurements. Concerning the salinity levels, the maximum level of all studied attributes was at 18.75 mmol/L NaCl, while the level of 70.31 mmol/L NaCl has the lowest values. The interaction between salinity levels and seaweed revealed that T4 (18.75 mmol/L NaCl plus 20 % seaweed) was the highest for all traits and T9 (70.31 mmol/L NaCl plus 0 % seaweed) was the lowest for all traits except for the potassium content. Concerning potassium content, T7 (54.69 mmol/L NaCl plus 0 % seaweed) was the lowest. These findings could help to develop efficient breeding methods for Moringa oleifera in the future.
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Affiliation(s)
- Hala M. Bayomy
- Food Science and Nutrition Department, Faculty of Science, University of Tabuk, Tabuk 71491, Saudi Arabia
| | - Eman S. Alamri
- Food Science and Nutrition Department, Faculty of Science, University of Tabuk, Tabuk 71491, Saudi Arabia
| | - Basmah M. Alharbi
- Biology Department, Faculty of Science, University of Tabuk, Tabuk 71491, Saudi Arabia
| | - Shaden H. Foudah
- Food Science and Nutrition Department, Faculty of Science, University of Tabuk, Tabuk 71491, Saudi Arabia
| | - Esmail A. Genaidy
- Pomology Department, Agricultural and Biology Research Institute, National Research Centre, Giza 12622, Egypt
| | - Amira K. Atteya
- Horticulture Department, Damanhour University, Damanhour 22516, Egypt
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7
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Sheikhalipour M, Mohammadi SA, Esmaielpour B, Spanos A, Mahmoudi R, Mahdavinia GR, Milani MH, Kahnamoei A, Nouraein M, Antoniou C, Kulak M, Gohari G, Fotopoulos V. Seedling nanopriming with selenium-chitosan nanoparticles mitigates the adverse effects of salt stress by inducing multiple defence pathways in bitter melon plants. Int J Biol Macromol 2023; 242:124923. [PMID: 37211072 DOI: 10.1016/j.ijbiomac.2023.124923] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 04/04/2023] [Accepted: 04/24/2023] [Indexed: 05/23/2023]
Abstract
Advances in the nanotechnology fields provided crucial applications in plant sciences, contributing to the plant performance and health under stress and stress-free conditions. Amid the applications, selenium (Se), chitosan and their conjugated forms as nanoparticles (Se-CS NPs) have been revealed to have potential of alleviating the harmful effects of the stress on several crops and subsequently enhancing the growth and productivity. The present study was addressed to assay the potential effects of Se-CS NPs in reversing or buffering the harmful effects of salt stress on growth, photosynthesis, nutrient concentration, antioxidant system and defence transcript levels in bitter melon )Momordica charantia(. In addition, some secondary metabolite-related genes were explicitly examined. In this regard, the transcriptional levels of WRKY1, SOS1, PM H+-ATPase, SKOR, Mc5PTase7, SOAR1, MAP30, α-MMC, polypeptide-P and PAL were quantified. Our results demonstrated that Se-CS NPs increased growth parameters, photosynthesis parameters (SPAD, Fv/Fm, Y(II)), antioxidant enzymatic activity (POD, SOD, CAT) and nutrient homeostasis (Na+/K+, Ca2+, and Cl-) and induced the expression of genes in bitter melon plants under salt stress (p ≤ 0.05). Therefore, applying Se-CS NPs might be a simple and effective way of improving crop plants' overall health and yield under salt stress conditions.
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Affiliation(s)
- Morteza Sheikhalipour
- Department of Horticulture, Faculty of Horticulture, University of Mohagheh Ardabili, Ardabil, Iran; Department of Plant Breeding and Biotechnology, Faculty of Agriculture, University of Tabriz, Tabriz, Iran
| | - Seyed Abolghasem Mohammadi
- Department of Plant Breeding and Biotechnology, Faculty of Agriculture, University of Tabriz, Tabriz, Iran; Center for Cell Pathology, Department of Life Sciences, Khazar University, Baku, Azerbaijan
| | - Behrooz Esmaielpour
- Department of Horticulture, Faculty of Horticulture, University of Mohagheh Ardabili, Ardabil, Iran
| | - Alexandros Spanos
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology Limassol, Cyprus
| | - Roghayeh Mahmoudi
- Department of Horticulture, Faculty of Agriculture, University of Zanjan, Zanjan, Iran
| | - Gholam Reza Mahdavinia
- Polymer Research Laboratory, Department of Chemistry, Faculty of Science, University of Maragheh, Maragheh, Iran
| | | | - Amir Kahnamoei
- Department of Plant Breeding and Biotechnology, Faculty of Agriculture, University of Tabriz, Tabriz, Iran
| | - Mojtaba Nouraein
- Department of Plant Genetics and Production, Faculty of Agriculture, University of Maragheh, Maragheh, Iran
| | - Chrystalla Antoniou
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology Limassol, Cyprus
| | - Muhittin Kulak
- Department of Herbal and Animal Production, Vocational School of Technical Sciences, Igdir University, Türkiye
| | - Gholamreza Gohari
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology Limassol, Cyprus; Department of Horticulture, Faculty of Agriculture, University of Maragheh, Maragheh, Iran.
| | - Vasileios Fotopoulos
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology Limassol, Cyprus.
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8
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Zhang L, Freschi G, Rouphael Y, De Pascale S, Lucini L. The differential modulation of secondary metabolism induced by a protein hydrolysate and a seaweed extract in tomato plants under salinity. FRONTIERS IN PLANT SCIENCE 2023; 13:1072782. [PMID: 36726679 PMCID: PMC9884811 DOI: 10.3389/fpls.2022.1072782] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2022] [Accepted: 12/28/2022] [Indexed: 06/18/2023]
Abstract
Climate change and abiotic stress challenges in crops are threatening world food production. Among others, salinity affects the agricultural sector by significantly impacting yield losses. Plant biostimulants have received increasing attention in the agricultural industry due to their ability to improve health and resilience in crops. The main driving force of these products lies in their ability to modulate plant metabolic processes involved in the stress response. This study's purpose was to investigate the effect of two biostimulant products, including a protein hydrolysate (Clever HX®) and a seaweed extract with high amino acids content (Ascovip®), and their combination, on the metabolomics profile of tomato crops grown under salt stress (150 mM NaCl). Several stress indicators (leaf relative water content, membrane stability index, and photosynthesis activity) and leaf mineral composition after salinity stress exposure were assessed to evaluate stress mitigation, together with growth parameters (shoot and root biomasses). After that, an untargeted metabolomics approach was used to investigate the mechanism of action of the biostimulants and their link with the increased resilience to stress. The application of the biostimulants used reduced the detrimental effect of salinity. In saline conditions, protein hydrolysate improved shoot dry weight while seaweed extracts improved root dry weight. Regarding stress indicators, the application of the protein hydrolysate was found to alleviate the membrane damage caused by salinity stress compared to untreated plants. Surprisingly, photosynthetic activity significantly improved after treatment with seaweed extracts, suggesting a close correlation between root development, root water assimilation capacity and photosynthetic activity. Considering the metabolic reprogramming after plant biostimulants application, protein hydrolysates and their combination with seaweed extracts reported a distinctive metabolic profile modulation, mainly in secondary metabolite, lipids and fatty acids, and phytohormones biosynthetic pathways. However, treatment with seaweed extract reported a similar metabolic reprogramming trend compared to salinity stress. Our findings indicate a different mechanism of action modulated by protein hydrolysate and seaweed extract, suggesting stronger activity as a stress mitigator of protein hydrolysate in tomato crops under salinity stress.
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Affiliation(s)
- Leilei Zhang
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
| | | | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Stefania De Pascale
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Italy
| | - Luigi Lucini
- Department for Sustainable Food Process, Università Cattolica del Sacro Cuore, Piacenza, Italy
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9
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Exogenously Supplemented Proline and Phenylalanine Improve Growth, Productivity, and Oil Composition of Salted Moringa by Up-Regulating Osmoprotectants and Stimulating Antioxidant Machinery. PLANTS 2022; 11:plants11121553. [PMID: 35736704 PMCID: PMC9227737 DOI: 10.3390/plants11121553] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 06/01/2022] [Accepted: 06/08/2022] [Indexed: 11/29/2022]
Abstract
Salinity is linked to poor plant growth and a reduction in global food output. Therefore, there is an essential need for plant adaptation and mitigation of salinity stress conditions. Plants combat salinity stress influences by promoting a set of physiological, biochemical, and molecular actions. Tremendous mechanisms are being applied to induce plant stress tolerance, involving amino acid application. For evaluating the growth and productivity of Moringa oleifera trees grown under salt stress conditions, moringa has been cultivated under different levels of salinity and subjected to a foliar spray of proline (Pro) and phenylalanine (Phe) amino acids. Moringa plants positively responded to the lowest level of salinity as the leaves, inflorescences, seeds, and oil yields have been increased, but the growth and productivity slightly declined with increasing salinity levels after that. However, Pro and Phe applications significantly ameliorate these effects, particularly, Pro-treatments which decelerated chlorophyll and protein degradation and enhanced vitamin C, polyphenols, and antioxidant activity. A slight reduction in mineral content was observed under the high levels of salinity. Higher osmoprotectants (proline, protein, and total soluble sugars) content was given following Pro treatment in salted and unsalted plants. A significant reduction in oil yield was obtained as affected by salinity stress. Additionally, salinity exhibited a reduction in oleic acid (C18:1), linoleic (C18:2), and linolenic (C18:3) acids, and an increase in stearic (C18:0), palmitic (C16:0), eicosenoic (C20:2), and behenic (C22:0) acids. Generally, Pro and Phe treatments overcome the harmful effects of salinity in moringa trees by stimulating the osmoprotectants, polyphenols, and antioxidant activity, causing higher dry matter accumulation and better defense against salinity stress.
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Solis CA, Yong MT, Zhou M, Venkataraman G, Shabala L, Holford P, Shabala S, Chen ZH. Evolutionary Significance of NHX Family and NHX1 in Salinity Stress Adaptation in the Genus Oryza. Int J Mol Sci 2022; 23:ijms23042092. [PMID: 35216206 PMCID: PMC8879705 DOI: 10.3390/ijms23042092] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 01/28/2022] [Accepted: 02/07/2022] [Indexed: 02/06/2023] Open
Abstract
Rice (Oryza sativa), a staple crop for a substantial part of the world’s population, is highly sensitive to soil salinity; however, some wild Oryza relatives can survive in highly saline environments. Sodium/hydrogen antiporter (NHX) family members contribute to Na+ homeostasis in plants and play a major role in conferring salinity tolerance. In this study, we analyzed the evolution of NHX family members using phylogeny, conserved domains, tertiary structures, expression patterns, and physiology of cultivated and wild Oryza species to decipher the role of NHXs in salt tolerance in Oryza. Phylogenetic analysis showed that the NHX family can be classified into three subfamilies directly related to their subcellular localization: endomembrane, plasma membrane, and tonoplast (vacuolar subfamily, vNHX1). Phylogenetic and structural analysis showed that vNHX1s have evolved from streptophyte algae (e.g., Klebsormidium nitens) and are abundant and highly conserved in all major land plant lineages, including Oryza. Moreover, we showed that tissue tolerance is a crucial trait conferring tolerance to salinity in wild rice species. Higher Na+ accumulation and reduced Na+ effluxes in leaf mesophyll were observed in the salt-tolerant wild rice species O. alta, O. latifolia, and O. coarctata. Among the key genes affecting tissue tolerance, expression of NHX1 and SOS1/NHX7 exhibited significant correlation with salt tolerance among the rice species and cultivars. This study provides insights into the evolutionary origin of plant NHXs and their role in tissue tolerance of Oryza species and facilitates the inclusion of this trait during the development of salinity-tolerant rice cultivars.
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Affiliation(s)
- Celymar Angela Solis
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
| | - Miing-Tiem Yong
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
| | - Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai 600113, India;
| | - Lana Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
| | - Paul Holford
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- Correspondence: (S.S.); (Z.-H.C.); Tel.: +61-245-701-934 (Z.-H.C.)
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia
- Correspondence: (S.S.); (Z.-H.C.); Tel.: +61-245-701-934 (Z.-H.C.)
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11
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Malakar P, Chattopadhyay D. Adaptation of plants to salt stress: the role of the ion transporters. JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY 2021; 30:668-683. [PMID: 0 DOI: 10.1007/s13562-021-00741-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 10/28/2021] [Indexed: 05/27/2023]
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12
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Gupta A, Shaw BP, Sahu BB. Post-translational regulation of the membrane transporters contributing to salt tolerance in plants. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:1199-1212. [PMID: 34665998 DOI: 10.1071/fp21153] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Accepted: 08/07/2021] [Indexed: 06/13/2023]
Abstract
This review article summarises the role of membrane transporters and their regulatory kinases in minimising the toxicity of Na+ in the plant under salt stress. The salt-tolerant plants keep their cytosolic level of Na+ up to 10-50mM. The first line of action in this context is the generation of proton motive force by the plasma membrane H+-ATPase. The generated proton motive force repolarises the membrane that gets depolarised due to passive uptake of Na+ under salt stress. The proton motive force generated also drives the plasma membrane Na+/H+ antiporter, SOS1 that effluxes the cytosolic Na+ back into the environment. At the intracellular level, Na+ is sequestered by the vacuole. Vacuolar Na+ uptake is mediated by Na+/H+ antiporter, NHX, driven by the electrochemical gradient for H+, generated by tonoplast H+ pumps, both H+ATPase and PPase. However, it is the expression of the regulatory kinases that make these transporters active through post-translational modification enabling them to effectively manage the cytosolic level of Na+, which is essential for tolerance to salinity in plants. Yet our knowledge of the expression and functioning of the regulatory kinases in plant species differing in tolerance to salinity is scant. Bioinformatics-based identification of the kinases like OsCIPK24 in crop plants, which are mostly salt-sensitive, may enable biotechnological intervention in making the crop cultivar more salt-tolerant, and effectively increasing its annual yield.
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Affiliation(s)
- Amber Gupta
- Abiotic Stress and Agro-Biotechnology Laboratory, Institute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, 751023, India; and Regional Centre for Biotechnology, Faridabad, Haryana, 121001, India
| | - Birendra Prasad Shaw
- Abiotic Stress and Agro-Biotechnology Laboratory, Institute of Life Sciences, Nalco Square, Bhubaneswar, Odisha, 751023, India; and Regional Centre for Biotechnology, Faridabad, Haryana, 121001, India
| | - Binod Bihari Sahu
- Department of Life Science, NIT Rourkela, Rourkela, Odisha, 769008, India
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Marathe D, Singh A, Raghunathan K, Thawale P, Kumari K. Current available treatment technologies for saline wastewater and land-based treatment as an emerging environment-friendly technology: A review. WATER ENVIRONMENT RESEARCH : A RESEARCH PUBLICATION OF THE WATER ENVIRONMENT FEDERATION 2021; 93:2461-2504. [PMID: 34453764 DOI: 10.1002/wer.1633] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Revised: 08/15/2021] [Accepted: 08/20/2021] [Indexed: 06/13/2023]
Abstract
Different industrial activities such as agro-food processing and manufacturing, leather manufacturing, and paper and pulp production generate highly saline wastewater. Direct discharge of saline wastewater has resulted in pollution of waterbodies by very high magnitudes. Consequently, an enormous number of pollutants such as heavy metals, salts, and organic matter are also released into the environment threatening the survival of human and biota. Saline wastewater also has significant effects on survival of plants, agricultural activities, and groundwater systems. Several treatments and disposal technologies are available for saline wastewater, but the selection of the most appropriate treatment and disposal technology still remains a major challenge with respect to the economic or technical constraints. Considering the sustainable management of saline wastewater, the present review is an attempt to compile the existing and emerging technologies for the treatment of saline wastewater. Among all the individual and hybrid technologies, land-based treatment systems are proven to be the most efficient technologies considering the energy demands, economic, and treatment efficiencies. Likewise, new and sustainable technologies are the need of hour integrating both the treatment and management and the resource recovery factors along with the ultimate goal of the protection in terms of human health and environmental aspect. PRACTITIONER POINTS: Physico-chemical treatment technologies for saline wastewater. Combined/Hybrid technologies for the treatment of saline wastewater. Land-based treatments as the environment friendly and sustainable method for saline wastewater treatment and disposal. Role of phytoremediation in land-based treatment.
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Affiliation(s)
- Deepak Marathe
- CSIR-National Environmental Engineering Research Institute, Nagpur, Maharashtra, 44 0020, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Anshika Singh
- CSIR-National Environmental Engineering Research Institute, Nagpur, Maharashtra, 44 0020, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Karthik Raghunathan
- CSIR-National Environmental Engineering Research Institute, Nagpur, Maharashtra, 44 0020, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Prashant Thawale
- CSIR-National Environmental Engineering Research Institute, Nagpur, Maharashtra, 44 0020, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Kanchan Kumari
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
- CSIR-National Environmental Engineering Research Institute, Kolkata Zonal Centre, Kolkata, West Bengal, 700 107, India
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Hafeez MN, Khan MA, Sarwar B, Hassan S, Ali Q, Husnain T, Rashid B. Mutant Gossypium universal stress protein-2 (GUSP-2) gene confers resistance to various abiotic stresses in E. coli BL-21 and CIM-496-Gossypium hirsutum. Sci Rep 2021; 11:20466. [PMID: 34650178 PMCID: PMC8516947 DOI: 10.1038/s41598-021-99900-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Accepted: 09/27/2021] [Indexed: 11/24/2022] Open
Abstract
Gossypium arboreum is considered a rich source of stress-responsive genes and the EST database revealed that most of its genes are uncharacterized. The full-length Gossypium universal stress protein-2 (GUSP-2) gene (510 bp) was cloned in E. coli and Gossypium hirsutum, characterized and point mutated at three positions, 352–354, Lysine to proline (M1-usp-2) & 214–216, aspartic acid to serine (M2-usp-2) & 145–147, Lysine to Threonine (M3-usp-2) to study its role in abiotic stress tolerance. It was found that heterologous expression of one mutant (M1-usp-2) provided enhanced tolerance against salt and osmotic stresses, recombinant cells have higher growth up to 10-5dilution in spot assay as compared to cells expressing W-usp-2 (wild type GUSP-2), M2-usp-2 and M3-usp-2 genes. M1-usp-2 gene transcript profiling exhibited significant expression (8.7 fold) in CIM-496-Gossypium hirsutum transgenic plants and enhance drought tolerance. However, little tolerance against heat and cold stresses in bacterial cells was observed. The results from our study concluded that the activity of GUSP-2 was enhanced in M1-usp-2 but wipe out in M2-usp-2 and M3-usp-2 response remained almost parallel to W-usp-2. Further, it was predicted through in silico analysis that M1-usp-2, W-usp-2 and M3-usp-2 may be directly involved in stress tolerance or function as a signaling molecule to activate the stress adaptive mechanism. However, further investigation will be required to ascertain its role in the adaptive mechanism of stress tolerance.
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Affiliation(s)
- Muhammad Nadeem Hafeez
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan. .,Drug Research Program, Division of Pharmaceutical Chemistry and Technology, Faculty of Pharmacy, University of Helsinki, Helsinki, Finland. .,School of PhD Program in Cellular and Molecular Biotechnology, University of Teramo, Teramo, Italy. .,Department of Pharmacy, University of Chieti - Pescara "G. d'Annunzio", Chieti, Italy.
| | - Mohsin Ahmad Khan
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan
| | - Bilal Sarwar
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan
| | - Sameera Hassan
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan
| | - Qurban Ali
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan. .,Institute of Molecular Biology and Biotechnology, University of Lahore, Lahore, Pakistan.
| | - Tayyab Husnain
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan
| | - Bushra Rashid
- Centre of Excellence in Molecular Biology, University of the Punjab Lahore, Lahore, Pakistan
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15
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Yan Y, He M, Guo J, Zeng H, Wei Y, Liu G, Hu W, Shi H. The CBL1/9-CIPK23-AKT1 complex is essential for low potassium response in cassava. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 167:430-437. [PMID: 34411782 DOI: 10.1016/j.plaphy.2021.08.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Revised: 08/13/2021] [Accepted: 08/13/2021] [Indexed: 06/13/2023]
Abstract
Cassava is a food crop and an important energy crop worldwide. However, its yield and quality are easily affected by low K+ stress, and the molecular mechanism of potassium channel is unknown in cassava. Herein, we revealed that calcineurin B-like 1/9 (MeCBL1/9)-CBL-interacting protein kinase 23 (MeCIPK23)-K+ TRANSPORTER1 (MeAKT1) complex plays an important role in low potassium response in cassava. Firstly, this study verified the in vivo role of MeAKT1 in K+ uptake in yeast. Secondly, we found that MeCBL1, MeCBL9, MeCIPK23 and MeAKT1 are involved in the absorption of K+ in cassava, and MeCBL1/9-CIPK23 complex is essential for MeAKT1-mediated K+ uptake. Moreover, MeCBL1/9-MeCIPK23-MeAKT1 showed different expression in different cassava varieties contrasting in the resistance to low K+ stress. Taken together, this study provides new insights into further improvement of K+ uptake in cassava.
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Affiliation(s)
- Yu Yan
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China
| | - Mei He
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China
| | - Jingru Guo
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China
| | - Hongqiu Zeng
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China
| | - Yunxie Wei
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China
| | - Guoyin Liu
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China
| | - Wei Hu
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Xueyuan Road 4, Haikou, Hainan province, 571101, China.
| | - Haitao Shi
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Tropical Crops, College of Forestry, Hainan University, Haikou, Hainan province, 570228, China.
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Rajput M, Choudhary K, Kumar M, Vivekanand V, Chawade A, Ortiz R, Pareek N. RNA Interference and CRISPR/Cas Gene Editing for Crop Improvement: Paradigm Shift towards Sustainable Agriculture. PLANTS 2021; 10:plants10091914. [PMID: 34579446 PMCID: PMC8467553 DOI: 10.3390/plants10091914] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 08/25/2021] [Accepted: 08/26/2021] [Indexed: 01/09/2023]
Abstract
With the rapid population growth, there is an urgent need for innovative crop improvement approaches to meet the increasing demand for food. Classical crop improvement approaches involve, however, a backbreaking process that cannot equipoise with increasing crop demand. RNA-based approaches i.e., RNAi-mediated gene regulation and the site-specific nuclease-based CRISPR/Cas9 system for gene editing has made advances in the efficient targeted modification in many crops for the higher yield and resistance to diseases and different stresses. In functional genomics, RNA interference (RNAi) is a propitious gene regulatory approach that plays a significant role in crop improvement by permitting the downregulation of gene expression by small molecules of interfering RNA without affecting the expression of other genes. Gene editing technologies viz. the clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated protein (CRISPR/Cas) have appeared prominently as a powerful tool for precise targeted modification of nearly all crops' genome sequences to generate variation and accelerate breeding efforts. In this regard, the review highlights the diverse roles and applications of RNAi and CRISPR/Cas9 system as powerful technologies to improve agronomically important plants to enhance crop yields and increase tolerance to environmental stress (biotic or abiotic). Ultimately, these technologies can prove to be important in view of global food security and sustainable agriculture.
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Affiliation(s)
- Meenakshi Rajput
- Department of Microbiology, School of Life Sciences, Central University of Rajasthan, Ajmer 305801, Rajasthan, India; (M.R.); (K.C.); (M.K.)
| | - Khushboo Choudhary
- Department of Microbiology, School of Life Sciences, Central University of Rajasthan, Ajmer 305801, Rajasthan, India; (M.R.); (K.C.); (M.K.)
| | - Manish Kumar
- Department of Microbiology, School of Life Sciences, Central University of Rajasthan, Ajmer 305801, Rajasthan, India; (M.R.); (K.C.); (M.K.)
| | - V. Vivekanand
- Centre for Energy and Environment, Malaviya National Institute of Technology, Jaipur 302017, Rajasthan, India;
| | - Aakash Chawade
- Department of Plant Breeding, Swedish University of Agricultural Sciences, P.O. Box 101, 230 53 Alnarp, Sweden;
- Correspondence: (A.C.); (N.P.)
| | - Rodomiro Ortiz
- Department of Plant Breeding, Swedish University of Agricultural Sciences, P.O. Box 101, 230 53 Alnarp, Sweden;
| | - Nidhi Pareek
- Department of Microbiology, School of Life Sciences, Central University of Rajasthan, Ajmer 305801, Rajasthan, India; (M.R.); (K.C.); (M.K.)
- Correspondence: (A.C.); (N.P.)
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17
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Effects of Sodium Chloride on Algae and Crustaceans—The Neighbouring Links of the Water Trophic Chain. WATER 2021. [DOI: 10.3390/w13182493] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Salinity limits the habitable living environment for aquatic organisms. Algae and crustaceans are widely used as bioindicators in freshwater environmental risk assessments. This study aimed to use biotests (Algaltoxkit and Daphtoxkit) to determine the effect of sodium chloride (NaCl) on algae Pseudokirchneriella subcapitata and crustaceans Daphnia magna. Standard biotests were extended to include NaCl effects on algal chlorophyll fluorescence and crustaceans swimming and heart rate. It was found that after 7 days, a 0.24 M of NaCl reduced the growth rate of the algae by 50% (EC50). A NaCl of 0.27 M inhibited the minimum (Fo), maximum (Fm) and variable (Fv) fluorescence by 50%, on average. The crustaceans also responded to NaCl. Those exposed to 0.19 M NaCl during 15 min swam slower by 50% and a 0.27 M immobilised three organisms (EC50). The crustacean immobilisation was less modified by NaCl than swimming. To determine the lethal effect in non-swimming organisms, the heart rate was examined. At 0.35 M of NaCl, all organisms were dead after 30 min, as their hearts did not beat. These studies suggest that physiological and behavioural features are sensitive indicators of the toxic effects of NaCl in algae and crustaceans, before morphological changes are observed.
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Morpho-Physiological, Biochemical, and Genetic Responses to Salinity in Medicago truncatula. PLANTS 2021; 10:plants10040808. [PMID: 33924007 PMCID: PMC8072551 DOI: 10.3390/plants10040808] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Revised: 04/12/2021] [Accepted: 04/12/2021] [Indexed: 02/08/2023]
Abstract
We used an integrated morpho-physiological, biochemical, and genetic approach to investigate the salt responses of four lines (TN1.11, TN6.18, JA17, and A10) of Medicago truncatula. Results showed that TN1.11 exhibited a high tolerance to salinity, compared with the other lines, recording a salinity induced an increase in soluble sugars and soluble proteins, a slight decrease in malondialdehyde (MDA) accumulation, and less reduction in plant biomass. TN6.18 was the most susceptible to salinity as it showed less plant weight, had elevated levels of MDA, and lower levels of soluble sugars and soluble proteins under salt stress. As transcription factors of the APETALA2/ethylene responsive factor (AP2/ERF) family play important roles in plant growth, development, and responses to biotic and abiotic stresses, we performed a functional characterization of MtERF1 gene. Real-time PCR analysis revealed that MtERF1 is mainly expressed in roots and is inducible by NaCl and low temperature. Additionally, under salt stress, a greater increase in the expression of MtERF1 was found in TN1.11 plants than that in TN6.18. Therefore, the MtERF1 pattern of expression may provide a useful marker for discriminating among lines of M. truncatula and can be used as a tool in breeding programs aiming at obtaining Medicago lines with improved salt tolerance.
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Cebrián G, Iglesias-Moya J, García A, Martínez J, Romero J, Regalado JJ, Martínez C, Valenzuela JL, Jamilena M. Involvement of ethylene receptors in the salt tolerance response of Cucurbita pepo. HORTICULTURE RESEARCH 2021; 8:73. [PMID: 33790231 PMCID: PMC8012379 DOI: 10.1038/s41438-021-00508-z] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Revised: 01/19/2021] [Accepted: 01/24/2021] [Indexed: 05/07/2023]
Abstract
Abiotic stresses have a negative effect on crop production, affecting both vegetative and reproductive development. Ethylene plays a relevant role in plant response to environmental stresses, but the specific contribution of ethylene biosynthesis and signalling components in the salt stress response differs between Arabidopsis and rice, the two most studied model plants. In this paper, we study the effect of three gain-of-function mutations affecting the ethylene receptors CpETR1B, CpETR1A, and CpETR2B of Cucurbita pepo on salt stress response during germination, seedling establishment, and subsequent vegetative growth of plants. The mutations all reduced ethylene sensitivity, but enhanced salt tolerance, during both germination and vegetative growth, demonstrating that the three ethylene receptors play a positive role in salt tolerance. Under salt stress, etr1b, etr1a, and etr2b germinate earlier than WT, and the root and shoot growth rates of both seedlings and plants were less affected in mutant than in WT. The enhanced salt tolerance response of the etr2b plants was associated with a reduced accumulation of Na+ in shoots and leaves, as well as with a higher accumulation of compatible solutes, including proline and total carbohydrates, and antioxidant compounds, such as anthocyanin. Many membrane monovalent cation transporters, including Na+/H+ and K+/H+ exchangers (NHXs), K+ efflux antiporters (KEAs), high-affinity K+ transporters (HKTs), and K+ uptake transporters (KUPs) were also highly upregulated by salt in etr2b in comparison with WT. In aggregate, these data indicate that the enhanced salt tolerance of the mutant is led by the induction of genes that exclude Na+ in photosynthetic organs, while maintaining K+/Na+ homoeostasis and osmotic adjustment. If the salt response of etr mutants occurs via the ethylene signalling pathway, our data show that ethylene is a negative regulator of salt tolerance during germination and vegetative growth. Nevertheless, the higher upregulation of genes involved in Ca2+ signalling (CpCRCK2A and CpCRCK2B) and ABA biosynthesis (CpNCED3A and CpNCED3B) in etr2b leaves under salt stress likely indicates that the function of ethylene receptors in salt stress response in C. pepo can be mediated by Ca2+ and ABA signalling pathways.
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Affiliation(s)
- Gustavo Cebrián
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Jessica Iglesias-Moya
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Alicia García
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Javier Martínez
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Jonathan Romero
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - José Javier Regalado
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Cecilia Martínez
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Juan Luis Valenzuela
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain
| | - Manuel Jamilena
- Department of Biology and Geology, Agri-food Campus of International Excellence (CeiA3) and Research Center CIAMBITAL, University of Almería, 04120, Almería, Spain.
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Fu J, Zhu C, Wang C, Liu L, Shen Q, Xu D, Wang Q. Maize transcription factor ZmEREB20 enhanced salt tolerance in transgenic Arabidopsis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 159:257-267. [PMID: 33395583 DOI: 10.1016/j.plaphy.2020.12.027] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2020] [Accepted: 12/23/2020] [Indexed: 05/22/2023]
Abstract
Soil salinity severely limits agricultural crop production worldwide. As one of the biggest plant specific transcription factor families, AP2/ERF members have been extensively studied to regulate plant growth, development and stress responses. However, the role of AP2/ERF family in maize salt tolerance remains largely unknown. In this study, we identified a maize AP2-ERF family member ZmEREB20 as a positive salinity responsive gene. Overexpression of ZmEREB20in Arabidopsis enhanced ABA sensitivity and resulted in delayed seed germination under salt stress through regulating ABA and GA related genes. ZmEREB20 overexpression lines also showed higher survival rates with elevated ROS scavenging toward high salinity. Furthermore, root hair growth inhibition by salt stress was markedly rescued in ZmEREB20 overexpression lines. Auxin transport inhibitor TIBA drastically enhanced root hair growth in ZmEREB20 overexpression Arabidopsis under salt stress, together with the increased expression of auxin-related genes, ion transporter genes and root hair growth genes by RNA-seq analysis. ZmEREB20 positively regulated salt tolerance through the molecular mechanism associated with hormone signaling, ROS scavenging and root hair plasticity, proving the potential target for crop breeding to improve salt resistance.
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Affiliation(s)
- Jingye Fu
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Chenying Zhu
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Chang Wang
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Lijun Liu
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Qinqin Shen
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Dongbei Xu
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China
| | - Qiang Wang
- Institute of Ecological Agriculture, Sichuan Agricultural University, Chengdu, 611130, China; State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Chengdu, 611130, China.
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21
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Kajarekar KV, Parulekar Berde CV, Salvi SP, Berde VB. Alleviation of Diverse Abiotic Stress in Plants Through the Fungal Communities. Fungal Biol 2021. [DOI: 10.1007/978-3-030-60659-6_11] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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22
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Truong HA, Lee S, Trịnh CS, Lee WJ, Chung EH, Hong SW, Lee H. Overexpression of the HDA15 Gene Confers Resistance to Salt Stress by the Induction of NCED3, an ABA Biosynthesis Enzyme. FRONTIERS IN PLANT SCIENCE 2021; 12:640443. [PMID: 33995439 PMCID: PMC8120240 DOI: 10.3389/fpls.2021.640443] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Accepted: 03/22/2021] [Indexed: 05/10/2023]
Abstract
Salt stress constitutes a major form of abiotic stress in plants. Histone modification plays an important role in stress tolerance, with particular reference to salt stress resistance. In the current study, we found that HDA15 overexpression confers salt stress resistance to young seedling stages of transgenic plants. Furthermore, salt stress induces HDA15 overexpression. Transcription levels of stress-responsive genes were increased in transgenic plants overexpressing HDA15 (HDA15 OE). NCED3, an abscisic acid (ABA) biosynthetic gene, which is highly upregulated in HDA15 transgenic plants, enhanced the accumulation of ABA, which promotes adaptation to salt stress. ABA homeostasis in HDA15 OE plants is maintained by the induction of CYP707As, which optimize endogenous ABA levels. Lastly, we found that the double-mutant HDA15 OE/hy5 ko plants are sensitive to salt stress, indicating that interaction between HDA15 and ELONGATED HYPOCOTYL 5 (HY5) is crucial to salt stress tolerance shown by HDA15 OE plants. Thus, our findings indicate that HDA15 is crucial to salt stress tolerance in Arabidopsis.
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Affiliation(s)
- Hai An Truong
- Department of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, South Korea
| | - Seokjin Lee
- Department of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, South Korea
| | - Cao Son Trịnh
- Department of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, South Korea
| | - Won Je Lee
- Department of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, South Korea
| | - Eui-Hwan Chung
- Department of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, South Korea
| | - Suk-Whan Hong
- Department of Molecular Biotechnology, College of Agriculture and Life Sciences, Bioenergy Research Center, Chonnam National University, Gwangju, South Korea
- Suk-Whan Hong
| | - Hojoung Lee
- Department of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, South Korea
- *Correspondence: Hojoung Lee
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23
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Meng Y, Yin Q, Yan Z, Wang Y, Niu J, Zhang J, Fan K. Exogenous Silicon Enhanced Salt Resistance by Maintaining K +/Na + Homeostasis and Antioxidant Performance in Alfalfa Leaves. FRONTIERS IN PLANT SCIENCE 2020; 11:1183. [PMID: 32983188 PMCID: PMC7479291 DOI: 10.3389/fpls.2020.01183] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2020] [Accepted: 07/21/2020] [Indexed: 05/23/2023]
Abstract
Silicon (Si) has been known to enhance salt resistance in plants. In this experiment, 4-weeks-old alfalfa seedlings were exposed to different NaCl concentrations (0-200 mM) with or without 2 mM Si for two weeks. The results showed that NaCl-stressed alfalfa seedlings showed a decrease in growth performance, such as stem extension rate, predawn leaf water potential (LWP) and the chlorophyll content, potassium (K+) concentration, as well as the ratio of potassium/sodium ion (K+/Na+). In contrast, NaCl-stressed alfalfa seedlings increased leaf Na+ concentration and the malondialdehyde (MDA) level, as well as the activities of superoxide dismutase (SOD), catalase (CAT), and peroxidase (POD) in alfalfa leaves. Besides, exogenous Si application enhanced photosynthetic parameters of NaCl-stressed alfalfa seedlings, which was accompanied by the improvement in predawn LWP, level of chlorophyll content, and water use efficiency (WUE). The Si-treated plants enhanced salinity tolerance by limiting Na+ accumulation while maintaining K+ concentration in leaves. It also established K+/Na+ homeostasis by increasing K+/Na+ radio to protect the leaves from Na+ toxicity and thereby maintained higher chlorophyll retention. Simultaneously, Si-treated plants showed higher antioxidant activities and decreased MDA content under NaCl stress. Our study concluded that Si application enhanced salt tolerance of alfalfa through improving the leaves photosynthesis, enhancing antioxidant performance and maintaining K+/Na+ homeostasis in leaves. Our data further indicated exogenous Si application could be effectively manipulated for improving salt resistance of alfalfa grown in saline soil.
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Affiliation(s)
- Yuanfa Meng
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Hohhot, China
- School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Qiang Yin
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Hohhot, China
| | - Zhijian Yan
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Hohhot, China
| | - Yuqing Wang
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Hohhot, China
| | - Jianming Niu
- School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Jie Zhang
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Hohhot, China
| | - Kai Fan
- Institute of Grassland Research, Chinese Academy of Agricultural Sciences, Hohhot, China
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Sriskantharajah K, Osumi S, Chuamnakthong S, Nampei M, Amas JC, Gregorio GB, Ueda A. Contribution of two different Na + transport systems to acquired salinity tolerance in rice. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 297:110517. [PMID: 32563456 DOI: 10.1016/j.plantsci.2020.110517] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 04/25/2020] [Accepted: 04/27/2020] [Indexed: 05/15/2023]
Abstract
To elucidate the mechanisms of salt acclimation, physiological parameters of 70 rice varieties were compared under control and salt stress conditions after the acclimation treatment. The results indicated that some rice varieties had the ability to acclimatize to salt stress, exhibiting improved growth following the acclimation treatment under subsequent salinity stress compared to those without acclimation treatment. Conversely, some varieties exhibited reduced growth both with and without acclimation treatment under subsequent salinity stress. Acclimatized varieties had differential patterns of Na+ accumulation in the leaf blades because some varieties reduced Na+ accumulation under salinity stress, whereas others did not. Under salt stress, the acclimatized varieties with low Na+ accumulation in the leaf blades highly induced the expression of the OsHKT1;5 gene in the roots, which may contribute to Na+ exclusion from the shoots. On the other hand, the acclimatized varieties with high Na+ accumulation in the leaf blades exhibited higher induction of the OsNHX1 gene, whose gene product participates in the compartmentalization of Na+ into vacuoles. Thus, rice develops different mechanisms of salinity acclimation using two Na+ transport systems, and active regulation of Na+ transport at the transcription level may be involved in the salt acclimation process and enhance salinity tolerance.
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Affiliation(s)
| | - Shota Osumi
- Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 739-8528, Japan
| | - Sumana Chuamnakthong
- Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 739-8528, Japan
| | - Mami Nampei
- Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, 739-8528, Japan
| | - Junrey C Amas
- School of Biological Sciences, University of Western Australia, 35 Stirling Hwy, Crawley, WA 6009, Australia
| | - Glenn B Gregorio
- Institute of Crop Science, College of Agriculture and Food Science, University of the Philippines Los Baños, College, Laguna, Philippines; International Rice Research Institute, DAPO Box 7777, Metro Manila, Philippines
| | - Akihiro Ueda
- Graduate School of Biosphere Science, Hiroshima University, Higashi-Hiroshima, 739-8528, Japan; Graduate School of Integrated Sciences for Life, Hiroshima University, Higashi-Hiroshima, 739-8528, Japan.
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25
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The Role of Stress-Responsive Transcription Factors in Modulating Abiotic Stress Tolerance in Plants. AGRONOMY-BASEL 2020. [DOI: 10.3390/agronomy10060788] [Citation(s) in RCA: 73] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Abiotic stresses, such as drought, high temperature, and salinity, affect plant growth and productivity. Furthermore, global climate change may increase the frequency and severity of abiotic stresses, suggesting that development of varieties with improved stress tolerance is critical for future sustainable crop production. Improving stress tolerance requires a detailed understanding of the hormone signaling and transcriptional pathways involved in stress responses. Abscisic acid (ABA) and jasmonic acid (JA) are key stress-response hormones in plants, and some stress-responsive transcription factors such as ABFs and MYCs function as direct components of ABA and JA signaling, playing a pivotal role in plant tolerance to abiotic stress. In addition, extensive studies have identified other stress-responsive transcription factors belonging to the NAC, AP2/ERF, MYB, and WRKY families that mediate plant response and tolerance to abiotic stress. These suggest that transcriptional regulation of stress-responsive genes is an essential step to determine the mechanisms underlying plant stress responses and tolerance to abiotic stress, and that these transcription factors may be important targets for development of crops with enhanced abiotic stress tolerance. In this review, we briefly describe the mechanisms underlying plant abiotic stress responses, focusing on ABA and JA metabolism and signaling pathways. We then summarize the diverse array of transcription factors involved in plant responses to abiotic stress, while noting their potential applications for improvement of stress tolerance.
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26
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Kang SM, Adhikari A, Lee KE, Khan MA, Khan AL, Shahzad R, Dhungana SK, Lee IJ. Inoculation with Indole-3-Acetic Acid-Producing Rhizospheric Rhodobacter sphaeroides KE149 Augments Growth of Adzuki Bean Plants Under Water Stress. J Microbiol Biotechnol 2020; 30:717-725. [PMID: 32482937 PMCID: PMC9728276 DOI: 10.4014/jmb.1911.11063] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Accepted: 02/09/2020] [Indexed: 12/15/2022]
Abstract
The use of plant growth-promoting rhizobacteria is economically viable and environmentally safe for mitigating various plant stresses. Abiotic stresses such as flood and drought are a serious threat to present day agriculture. In the present study, the indole-3-acetic acid-producing rhizobacterium R. sphaeroides KE149 was selected, and its effect on the growth of adzuki bean plants was investigated under flood stress (FS) and drought stress (DS). IAA quantification of bacterial pure culture revealed that KE149 produced significant amount of IAA. KE149 inoculation significantly decreased stress-responsive endogenous abscisic acid and jasmonic acid and increased salicylic acid in plants under DS and FS. KE149 inoculation also increased proline under DS and methionine under FS. Moreover, KE149 inoculation significantly increased the calcium (Ca), magnesium (Mg), and potassium (K) content and lowered the sodium (Na) content in the plant shoot under stress. KE149-treated plants had significantly higher root length, shoot length, stem diameter, biomass, and chlorophyll content under both normal and stressed conditions. These results suggest that KE149 could be an efficient biofertilizer for mitigating water stress.
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Affiliation(s)
- Sang-Mo Kang
- School of Applied Biosciences, Kyungpook National University, Daegu 4566, Republic of Korea
| | - Arjun Adhikari
- School of Applied Biosciences, Kyungpook National University, Daegu 4566, Republic of Korea
| | - Ko-Eun Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 4566, Republic of Korea
| | - Muhammad Aaqil Khan
- School of Applied Biosciences, Kyungpook National University, Daegu 4566, Republic of Korea
| | - Abdul Latif Khan
- Natural and Medical Science Research Center, University of Nizwa, Nizwa 616, Oman
| | - Raheem Shahzad
- Department of Biology, College of Science, Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Damam 1441, Saudi Arabia
- Basic and Applied Scientific Research Center, Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Damam 311, Saudi Arabia
| | - Sanjeev Kumar Dhungana
- Department of Southern Area Crop Science, National Institute of Crop Science Rural Development Administration, Miryang 0424, Republic of Korea
| | - In-Jung Lee
- School of Applied Biosciences, Kyungpook National University, Daegu 4566, Republic of Korea
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Gupta PK, Balyan HS, Sharma S, Kumar R. Genetics of yield, abiotic stress tolerance and biofortification in wheat (Triticum aestivum L.). TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2020; 133:1569-1602. [PMID: 32253477 DOI: 10.1007/s00122-020-03583-3] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Accepted: 03/13/2020] [Indexed: 05/18/2023]
Abstract
A review of the available literature on genetics of yield and its component traits, tolerance to abiotic stresses and biofortification should prove useful for future research in wheat in the genomics era. The work reviewed in this article mainly covers the available information on genetics of some important quantitative traits including yield and its components, tolerance to abiotic stresses (heat, drought, salinity and pre-harvest sprouting = PHS) and biofortification (Fe/Zn and phytate contents with HarvestPlus Program) in wheat. Major emphasis is laid on the recent literature on QTL interval mapping and genome-wide association studies, giving lists of known QTL and marker-trait associations. Candidate genes for different traits and the cloned and characterized genes for yield traits along with the molecular mechanism are also described. For each trait, an account of the present status of marker-assisted selection has also been included. The details of available results have largely been presented in the form of tables; some of these tables are included as supplementary files.
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Affiliation(s)
- Pushpendra Kumar Gupta
- Department of Genetics and Plant Breeding, Chaudhary Charan Singh University, Meerut, 250 004, India.
| | - Harindra Singh Balyan
- Department of Genetics and Plant Breeding, Chaudhary Charan Singh University, Meerut, 250 004, India
| | - Shailendra Sharma
- Department of Genetics and Plant Breeding, Chaudhary Charan Singh University, Meerut, 250 004, India
| | - Rahul Kumar
- Department of Genetics and Plant Breeding, Chaudhary Charan Singh University, Meerut, 250 004, India
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Chakraborty K, Mondal S, Ray S, Samal P, Pradhan B, Chattopadhyay K, Kar MK, Swain P, Sarkar RK. Tissue Tolerance Coupled With Ionic Discrimination Can Potentially Minimize the Energy Cost of Salinity Tolerance in Rice. FRONTIERS IN PLANT SCIENCE 2020; 11:265. [PMID: 32269578 PMCID: PMC7109317 DOI: 10.3389/fpls.2020.00265] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Accepted: 02/20/2020] [Indexed: 05/15/2023]
Abstract
Salinity is one of the major constraints in rice production. To date, development of salt-tolerant rice cultivar is primarily focused on salt-exclusion strategies, which incur greater energy cost. The present study aimed to evaluate a balancing strategy of ionic discrimination vis-à-vis tissue tolerance, which could potentially minimize the energy cost of salt tolerance in rice. Four rice genotypes, viz., FL478, IR29, Kamini, and AC847, were grown hydroponically and subjected to salt stress equivalent to 12 dS m-1 at early vegetative stage. Different physiological observations (leaf chlorophyll content, chlorophyll fluorescence traits, and tissue Na+ and K+ content) and visual scoring suggested a superior Na+-partitioning strategy operating in FL478. A very low tissue Na+/K+ ratio in the leaves of FL478 after 7 days of stress hinted the existence of selective ion transport mechanism in this genotype. On the contrary, Kamini, an equally salt-tolerant genotype, was found to possess a higher leaf Na+/K+ ratio than does FL478 under similar stress condition. Salt-induced expression of different Na+ and K+ transporters indicated significant upregulation of SOS, HKT, NHX, and HAK groups of transporters in both leaves and roots of FL478, followed by Kamini. The expression of plasma membrane and vacuolar H+ pumps (OsAHA1, OsAHA7, and OsV-ATPase) were also upregulated in these two genotypes. On the other hand, IR29 and AC847 showed greater salt susceptibility owing to excess upward transport of Na+ and eventually died within a few days of stress imposition. But in the "leaf clip" assay, it was found that both IR29 and Kamini had high tissue-tolerance and chlorophyll-retention abilities. On the contrary, FL478, although having higher ionic-discrimination ability, showed the least degree of tissue tolerance as evident from the LC50 score (amount of Na+ required to reduce the initial chlorophyll content to half) of 336 mmol g-1 as against 459 and 424 mmol g-1 for IR29 and Kamini, respectively. Overall, the present study indicated that two components (ionic selectivity and tissue tolerance) of salt tolerance mechanism are distinct in rice. Unique genotypes like Kamini could effectively balance both of these strategies to achieve considerable salt tolerance, perhaps with lesser energy cost.
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29
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Yousefirad S, Soltanloo H, Ramezanpour SS, Zaynali Nezhad K, Shariati V. The RNA-seq transcriptomic analysis reveals genes mediating salt tolerance through rapid triggering of ion transporters in a mutant barley. PLoS One 2020; 15:e0229513. [PMID: 32187229 PMCID: PMC7080263 DOI: 10.1371/journal.pone.0229513] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 02/09/2020] [Indexed: 12/23/2022] Open
Abstract
Considering the complex nature of salinity tolerance mechanisms, the use of isogenic lines or mutants possessing the same genetic background albeit different tolerance to salinity is a suitable method for reduction of analytical complexity to study these mechanisms. In the present study, whole transcriptome analysis was evaluated using RNA-seq method between a salt-tolerant mutant line "M4-73-30" and its wild-type "Zarjou" cultivar at seedling stage after six hours of exposure to salt stress (300 mM NaCl). Transcriptome sequencing yielded 20 million reads for each genotype. A total number of 7116 transcripts with differential expression were identified, 1586 and 1479 of which were obtained with significantly increased expression in the mutant and the wild-type, respectively. In addition, the families of WRKY, ERF, AP2/EREBP, NAC, CTR/DRE, AP2/ERF, MAD, MIKC, HSF, and bZIP were identified as the important transcription factors with specific expression in the mutant genotype. The RNA-seq results were confirmed at several time points using qRT-PCR for some important salt-responsive genes. In general, the results revealed that the mutant accumulated higher levels of sodium ion in the root and decreased its transfer to the shoot. Also, the mutant increased the amount of potassium ion leading to the maintenance a high ratio [K+]/[Na+] in the shoot compared to its wild-type via fast stomata closure and consequently transpiration reduction under the salt stress. Moreover, a reduction in photosynthesis and respiration was observed in the mutant, resulting in utilization of the stored energy and the carbon for maintaining the plant tissues, which is considered as a mechanism of salt tolerance in plants. Up-regulation of catalase, peroxidase, and ascorbate peroxidase genes has resulted in higher accumulation of H2O2 in the wild-type compared to the mutant. Therefore, the wild-type initiated rapid ROS signals which led to less oxidative scavenging in comparison with the mutant. The mutant increased expression in the ion transporters and the channels related to the salinity to maintain the ion homeostasis. In overall, the results demonstrated that the mutant responded better to the salt stress under both osmotic and ionic stress phases and lower damage was observed in the mutant compared to its wild-type under the salt stress.
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Affiliation(s)
- Sareh Yousefirad
- Department of Plant Breeding and Plant Biotechnolgy, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Golestan, Iran
| | - Hassan Soltanloo
- Department of Plant Breeding and Plant Biotechnolgy, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Golestan, Iran
| | - Seyedeh Sanaz Ramezanpour
- Department of Plant Breeding and Plant Biotechnolgy, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Golestan, Iran
| | - Khalil Zaynali Nezhad
- Department of Plant Breeding and Plant Biotechnolgy, Gorgan University of Agricultural Sciences and Natural Resources, Gorgan, Golestan, Iran
| | - Vahid Shariati
- Department of Genome Center, National Institute of Genetic Engineering and Biotechnology, Tehran, Iran
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Das P, Behera BK, Chatterjee S, Das BK, Mohapatra T. De novo transcriptome analysis of halotolerant bacterium Staphylococcus sp. strain P-TSB-70 isolated from East coast of India: In search of salt stress tolerant genes. PLoS One 2020; 15:e0228199. [PMID: 32040520 PMCID: PMC7010390 DOI: 10.1371/journal.pone.0228199] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2019] [Accepted: 01/09/2020] [Indexed: 12/20/2022] Open
Abstract
In the present study, we identified salt stress tolerant genes from the marine bacterium Staphylococcus sp. strain P-TSB-70 through transcriptome sequencing. In favour of whole-genome transcriptome profiling of Staphylococcus sp. strain P-TSB-70 (GenBank Accn. No. KP117091) which tolerated upto 20% NaCl stress, the strain was cultured in the laboratory condition with 20% NaCl stress. Transcriptome analyses were performed by SOLiD4.0 sequencing technology from which 10280 and 9612 transcripts for control and treated, respectively, were obtained. The coverage per base (CPB) statistics were analyzed for both the samples. Gene ontology (GO) analysis has been categorized at varied graph levels based on three primary ontology studies viz. cellular components, biological processes, and molecular functions. The KEGG analysis of the assembled transcripts using KAAS showed presumed components of metabolic pathways which perhaps implicated in diverse metabolic pathways responsible for salt tolerance viz. glycolysis/gluconeogenesis, oxidative phosphorylation, glutathione metabolism, etc. further involving in salt tolerance. Overall, 90 salt stress tolerant genes were identified as of 186 salt-related transcripts. Several genes have been found executing normally in the TCA cycle pathway, integral membrane proteins, generation of the osmoprotectants, enzymatic pathway associated with salt tolerance. Recognized genes fit diverse groups of salt stress genes viz. abc transporter, betaine, sodium antiporter, sodium symporter, trehalose, ectoine, and choline, that belong to different families of genes involved in the pathway of salt stress. The control sample of the bacterium showed elevated high proportion of transcript contigs (29%) while upto 20% salt stress treated sample of the bacterium showed a higher percentage of transcript contigs (31.28%). A total of 1,288 and 1,133 transcript contigs were measured entirely as novel transcript contigs in both control and treated samples, respectively. The structure and function of 10 significant salt stress tolerant genes of Staphylococcus sp. have been analyzed in this study. The information acquired in the present study possibly used to recognize and clone the salt stress tolerant genes and support in developing the salt stress-tolerant plant varieties to expand the agricultural productivity in the saline system.
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Affiliation(s)
- Priyanka Das
- Fishery Resource and Environmental Management Division, Biotechnology Laboratory, ICAR- Central Inland Fisheries Research Institute, Barrackpore, West Bengal, India
| | - Bijay Kumar Behera
- Fishery Resource and Environmental Management Division, Biotechnology Laboratory, ICAR- Central Inland Fisheries Research Institute, Barrackpore, West Bengal, India
- * E-mail:
| | - Soumendranath Chatterjee
- Parasitology and Microbiology Research Laboratory, Department of Zoology, University of Burdwan, Burdwan, West Bengal, India
| | - Basanta Kumar Das
- Fishery Resource and Environmental Management Division, Biotechnology Laboratory, ICAR- Central Inland Fisheries Research Institute, Barrackpore, West Bengal, India
| | - Trilochan Mohapatra
- Secretary, DARE and Director General, Indian Council of Agricultural Research, New Delhi, India
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Shohan MUS, Sinha S, Nabila FH, Dastidar SG, Seraj ZI. HKT1;5 Transporter Gene Expression and Association of Amino Acid Substitutions With Salt Tolerance Across Rice Genotypes. FRONTIERS IN PLANT SCIENCE 2019; 10:1420. [PMID: 31749823 PMCID: PMC6843544 DOI: 10.3389/fpls.2019.01420] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Accepted: 10/14/2019] [Indexed: 05/20/2023]
Abstract
Plants need to maintain a low Na+/K+ ratio for their survival and growth when there is high sodium concentration in soil. Under these circumstances, the high affinity K+ transporter (HKT) and its homologs are known to perform a critical role with HKT1;5 as a major player in maintaining Na+ concentration. Preferential expression of HKT1;5 in roots compared to shoots was observed in rice and rice-like genotypes from real time PCR, microarray, and RNAseq experiments and data. Its expression trend was generally higher under increasing salt stress in sensitive IR29, tolerant Pokkali, both glycophytes; as well as the distant wild rice halophyte, Porteresia coarctata, indicative of its importance during salt stress. These results were supported by a low Na+/K+ ratio in Pokkali, but a much lower one in P. coarctata. HKT1;5 has functional variability among salt sensitive and tolerant varieties and multiple sequence alignment of sequences of HKT1;5 from Oryza species and P. coarctata showed 4 major amino acid substitutions (140 P/A/T/I, 184 H/R, D332H, V395L), with similarity amongst the tolerant genotypes and the halophyte but in variance with sensitive ones. The best predicted 3D structure of HKT1;5 was generated using Ktrab potassium transporter as template. Among the four substitutions, conserved presence of aspartate (332) and valine (395) in opposite faces of the membrane along the Na+/K+ channel was observed only for the tolerant and halophytic genotypes. A model based on above, as well as molecular dynamics simulation study showed that valine is unable to generate strong hydrophobic network with its surroundings in comparison to leucine due to reduced side chain length. The resultant alteration in pore rigidity increases the likelihood of Na+ transport from xylem sap to parenchyma and further to soil. The model also proposes that the presence of aspartate at the 332 position possibly leads to frequent polar interactions with the extracellular loop polar residues which may shift the loop away from the opening of the constriction at the pore and therefore permit easy efflux of the Na+. These two substitutions of the HKT1;5 transporter probably help tolerant varieties maintain better Na+/K+ ratio for survival under salt stress.
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Affiliation(s)
- Mohammad Umer Sharif Shohan
- Plant Biotechnology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, Bangladesh
| | - Souvik Sinha
- Division of Bioinformatics, Bose Institute, Kolkata, India
| | - Fahmida Habib Nabila
- Plant Biotechnology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, Bangladesh
| | | | - Zeba I. Seraj
- Plant Biotechnology Laboratory, Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, Bangladesh
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Wang H, Liu C, Ren Y, Wu M, Wu Z, Chen Y, He L, Tang B, Huang X, Shabala S, Yu M, Huang L. An RNA-binding protein MUG13.4 interacts with AtAGO2 to modulate salinity tolerance in Arabidopsis. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 288:110218. [PMID: 31521214 DOI: 10.1016/j.plantsci.2019.110218] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Revised: 08/07/2019] [Accepted: 08/12/2019] [Indexed: 06/10/2023]
Abstract
Salt stress is a major constraint to plant growth and development, and plants have developed sophisticated mechanisms to cope with it. AtAGO2, an argonaute protein, is known to play an important role in plant adaptation to salt stress; however, the molecular mechanism of this phenomenon remains essentially unexplored. Here, we performed the yeast two-hybrid assay and found an R3H-domain containing protein, designated as MUG13.4, interacting with AtAGO2. Further bimolecular fluorescence complement (BiFC), glutathione-S-transferase (GST) pull-down, and co-immunoprecipitation (Co-IP) assays confirmed that MUG13.4 interacted with AtAGO2, and MUG13.4 could affect the slicing activity of AtAGO2 associated with miR173. MUG13.4 and AtAGO2 were both predominantly expressed in seeds and roots. Phenotypic analyses of the single and double mutants under salt stress confirmed involvement of MUG13.4-AtAGO2 complex as a component of the salt tolerance mechanism. The mug13.4×ago2-1 double mutant displayed retarded growth and hypersensitivity to salt stress that was more pronounced than in mug13.4 or atago2-1 single mutants. TAS1c-tasiRNA generating system in Nicotiana benthamiana revealed that MUG13.4 could influence the slicing activity of AtAGO2. We also found that MUG13.4 increasingly changed the phenotype of slicer-defected mutants of AtAGO2 in response to salt stress. These findings suggested that the function of AtAGO2 upon salt stress was dependent on MUG13.4. Further investigation suggested that AtAGO2 improved Arabidopsis tolerance to salt stress by affecting operation of the SOS signaling cascade at the transcript level. Taken together, these findings reveal a novel function of MUG13.4 in adjusting Arabidopsis adaptation to salt stress.
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Affiliation(s)
- Huayang Wang
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Chen Liu
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China; College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China
| | - Yincai Ren
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Minghua Wu
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Zewan Wu
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Ying Chen
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Lilan He
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Bing Tang
- Guizhou Academy of Agricultural Sciences, Guiyang, 550025, China
| | - Xin Huang
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China
| | - Sergey Shabala
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China; School of Land and Food, University of Tasmania, Private Bag 54, Hobart, Tas, 7001, Australia
| | - Min Yu
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China.
| | - Liping Huang
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, 528000, China; College of Life Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, 210095, China.
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Maggio A, Bressan RA, Zhao Y, Park J, Yun DJ. It's Hard to Avoid Avoidance: Uncoupling the Evolutionary Connection between Plant Growth, Productivity and Stress "Tolerance". Int J Mol Sci 2018; 19:E3671. [PMID: 30463352 PMCID: PMC6274854 DOI: 10.3390/ijms19113671] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2018] [Revised: 11/06/2018] [Accepted: 11/15/2018] [Indexed: 12/03/2022] Open
Abstract
In the last 100 years, agricultural developments have favoured selection for highly productive crops, a fact that has been commonly associated with loss of key traits for environmental stress tolerance. We argue here that this is not exactly the case. We reason that high yield under near optimal environments came along with hypersensitization of plant stress perception and consequently early activation of stress avoidance mechanisms, such as slow growth, which were originally needed for survival over long evolutionary time periods. Therefore, mechanisms employed by plants to cope with a stressful environment during evolution were overwhelmingly geared to avoid detrimental effects so as to ensure survival and that plant stress "tolerance" is fundamentally and evolutionarily based on "avoidance" of injury and death which may be referred to as evolutionary avoidance (EVOL-Avoidance). As a consequence, slow growth results from being exposed to stress because genes and genetic programs to adjust growth rates to external circumstances have evolved as a survival but not productivity strategy that has allowed extant plants to avoid extinction. To improve productivity under moderate stressful conditions, the evolution-oriented plant stress response circuits must be changed from a survival mode to a continued productivity mode or to avoid the evolutionary avoidance response, as it were. This may be referred to as Agricultural (AGRI-Avoidance). Clearly, highly productive crops have kept the slow, reduced growth response to stress that they evolved to ensure survival. Breeding programs and genetic engineering have not succeeded to genetically remove these responses because they are polygenic and redundantly programmed. From the beginning of modern plant breeding, we have not fully appreciated that our crop plants react overly-cautiously to stress conditions. They over-reduce growth to be able to survive stresses for a period of time much longer than a cropping season. If we are able to remove this polygenic redundant survival safety net we may improve yield in moderately stressful environments, yet we will face the requirement to replace it with either an emergency slow or no growth (dormancy) response to extreme stress or use resource management to rescue crops under extreme stress (or both).
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Affiliation(s)
- Albino Maggio
- Department of Agricultural Science, University of Napoli Federico II, 80055 Portici, NA, Italy.
| | - Ray A Bressan
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907-2010, USA.
| | - Yang Zhao
- Shanghai Center for Plant Stress Biology and CAS Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China.
| | - Junghoon Park
- Department of Biomedical Science and Engineering Konkuk University, Seoul 05029, Korea.
| | - Dae-Jin Yun
- Department of Biomedical Science and Engineering Konkuk University, Seoul 05029, Korea.
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Seifi Kalhor M, Aliniaeifard S, Seif M, Javadi E, Bernard F, Li T, Lastochkina O. Rhizobacterium Bacillus subtilisreduces toxic effects of high electrical conductivity in soilless culture of lettuce. ACTA HORTICULTURAE 2018:471-478. [DOI: 10.17660/actahortic.2018.1227.59] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/23/2023]
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Cao-Pham AH, Urano D, Ross-Elliott TJ, Jones AM. Nudge-nudge, WNK-WNK (kinases), say no more? THE NEW PHYTOLOGIST 2018; 220:35-48. [PMID: 29949669 DOI: 10.1111/nph.15276] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2017] [Accepted: 05/01/2018] [Indexed: 05/09/2023]
Abstract
Contents Summary 35 I Overview of animal and plant WNK kinases 35 II. Structure: domains and topology 36 III. Phylogeny-evolutionary relationships 41 IV. Plant WNK kinase distribution and regulation of WNK expression and activity 41 V. Functions of WNK family members in physiology and development 41 VI. Say no more? Still many questions to be answered 45 Acknowledgements 46 References 46 SUMMARY: WITH NO LYSINE (WNK) kinases are serine/threonine kinases uniquely characterized by an anomalous placement of a catalytic lysine, hence their moniker. In animals, WNK protein kinases play critical roles in protein trafficking of components that mediate renal ion transport processes and regulate osmoregulation of cell volume. In plants, the WNK kinase gene family is larger and more diverse. Recent studies revealed WNK kinase roles in orchestrating the trafficking of an ion channel, a lipid kinase complex in animals, and a heterotrimeric G protein signaling component in plants that is necessary for signal transduction. For this reason, new attention is geared toward investigating the mechanisms adopted by WNK kinases to nudge intracellular proteins to their destinations. In this review, the functions of WNK kinases in protein trafficking are derived from what we have learned from the model organism Arabidopsis thaliana. To place this new idea in context, we provide the predicted WNK kinase structures, their predicted expression patterns, a speculated evolutionary pathway, and the regulatory roles of plant WNKs in transport processes and other physiologies. We brazenly predict that the WNK kinases in both plants and animals will soon be recognized as a nexus for trafficking-based signal transduction.
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Affiliation(s)
- Anh H Cao-Pham
- Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA
- Department of Biological Sciences, National University of Singapore, 117543, Singapore
| | - Daisuke Urano
- Temasek Life Sciences Laboratory and Department of Biological Sciences, National University of Singapore, 117604, Singapore
| | - Timothy J Ross-Elliott
- Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA
| | - Alan M Jones
- Department of Biology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA
- Department of Pharmacology, The University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA
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Yang Y, Guo Z, Liu Q, Tang J, Huang S, Dhankher OP, Yuan H. Growth, physiological adaptation, and NHX gene expression analysis of Iris halophila under salt stress. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2018; 25:25207-25216. [PMID: 29943252 DOI: 10.1007/s11356-018-2593-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2018] [Accepted: 06/18/2018] [Indexed: 06/08/2023]
Abstract
This study investigated the growth, physiological changes, and the transcript levels of NHX1 gene of Iris halophila in response to low NaCl concentration (50 mM) and high NaCl concentration (150 mM). Our results showed that both 50 and 150 mM NaCl had no obvious negative effects on plant growth; what is more, low NaCl concentration (50 mM) increased root length, root fresh weight, and the ratio of root length to leaf length compared with the control group. The malondialdehyde (MDA) contents in leaves and roots of I. halophila had no obvious difference as compared with control. Proline levels of I. halophila exhibited basically an enhancement under salt stress conditions. Particularly at 4 days, the proline contents in leaves reached 1.85 to 2.31-fold higher and the contents in roots reached 1.27 to 1.62-fold higher than that of control at 50 and 150 mM NaCl, respectively. The contents of the soluble sugar in leaves and roots of I. halophila under 150 mM NaCl at 7 days were 32.4 and 98.7% higher than that of control, respectively. The increase rate of K+ contents with the increasing concentration of salt was less than that of Na+ contents, but K+ contents in the seedlings under NaCl stress was still higher than Na+ contents and the ratio of K+ to Na+ was also greater than 1. The transcript levels of IhNHX1 in leaves of I. halophila at 4 and 7 days under 150 mM NaCl were higher than that of control; however, the transcript levels of IhNHX1 in roots had no significant difference compared with the control under low and high salt stress at 1, 4, and 7 days. Therefore, salt tolerance in I. halophila could be partially due to higher proline, soluble sugar, and K+ accumulation.
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Affiliation(s)
- Yongheng Yang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China
| | - Zhi Guo
- Circular Agriculture Research Center, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China
| | - Qingquan Liu
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China
| | - Jun Tang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China
| | - Suzhen Huang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China
| | - Om Parkash Dhankher
- Stockbridge School of Agriculture, University of Massachusetts Amherst, Amherst, MA, 01003, USA.
| | - Haiyan Yuan
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China.
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Huang KC, Lin WC, Cheng WH. Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. BMC PLANT BIOLOGY 2018; 18:40. [PMID: 29490615 PMCID: PMC5831739 DOI: 10.1186/s12870-018-1255-z] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2017] [Accepted: 02/21/2018] [Indexed: 05/03/2023]
Abstract
BACKGROUND Although the nucleolus involves two major functions: pre-rRNA processing and ribosome biogenesis/assembly, increasing evidence indicates that it also plays important roles in response to abiotic stress. However, the possible regulatory mechanisms underlying the nucleolar proteins responsive to abiotic stress are largely unknown. High salinity is one of the major abiotic stresses, which hinders plant growth and productivity. Here, genetic screening approach was used to identify a salt hypersensitive mutant 9 (sahy9) mutant, also known as apum23, in Arabidopsis thaliana. Functional characterization of SAHY9/APUM23 through analyses of gene/protein expression profiles and metabolites was performed to decipher the possible regulatory mechanisms of the nucleolar protein SAHY9/APUM23 in response to salt stress. RESULTS Seedlings of the sahy9/apum23 mutant displayed postgermination developmental arrest and then became bleached after prolonged culture under various salt stresses. Transcriptomic and proteomic analyses of salt-treated sahy9/apum23 and wild-type seedlings revealed differential expression of genes/proteins that have similar functional categories of biological processes, primarily those involved in cellular and metabolic processes as well as abiotic and biotic stress responses. However, the consistency of differential gene expression at both the transcript and protein levels was low (~ 12%), which suggests the involvement of posttranscriptional processing during the salt response. Furthermore, the altered expression of genes and proteins mediated by SAHY9/APUM23 regarding salt sensitivity involves abscisic acid (ABA) biosynthesis and signaling, abiotic stress responses, and ribosome biogenesis-related genes. Importantly, NCED3, ABI2, PP2CA, and major ABA-responsive marker genes, such as RD20 and RD29B, were down-regulated at both the transcript and protein levels in conjunction with lower contents of ABA and changes in the expression of a subset of LEA proteins in sahy9/apum23 mutants under salt stress. Moreover, the salt hypersensitivity of the sahy9/apum23 mutant was largely rescued by the exogenous application of ABA during salt stress. CONCLUSION Our results revealed that SAHY9/APUM23 regulated the expression of ribosome biogenesis-related genes and proteins, which further affected the ribosome composition and abundance, and potential posttranscriptional regulation. The salt hypersensitivity of sahy9/apum23 is associated with the ABA-mediated signaling pathway and the downstream stress-responsive network of this pathway.
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Affiliation(s)
- Kai-Chau Huang
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Wei-Chih Lin
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | - Wan-Hsing Cheng
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan
- Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
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Tounsi S, Feki K, Hmidi D, Masmoudi K, Brini F. Salt stress reveals differential physiological, biochemical and molecular responses in T. monococcum and T. durum wheat genotypes. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2017; 23:517-528. [PMID: 28878491 PMCID: PMC5567718 DOI: 10.1007/s12298-017-0457-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Revised: 06/09/2017] [Accepted: 06/12/2017] [Indexed: 05/30/2023]
Abstract
Salt stress responses implicate a complex mechanism and differ from plant species to another. In this study, we analyzed the physiological, biochemical and molecular responses to salt stress of the diploid wheat (T. monococcum) and compared to the tetraploid wheat (T. durum). Our results showed that the diploid wheat cultivar (cv. Turkey) is relatively tolerant to different salt stress conditions than the tetraploid wheat cultivar (cv. Om Rabia3). This tolerance was manifested by significant germination, plant growth and uptake of water generating cell turgor and development. Moreover, total chlorophyll content was higher in the diploid wheat than that in the tetraploid wheat. The Na+ content in leaf blade of the cv. Om Rabia3 was significantly higher than that of the cv. Turkey, suggesting that the diploid cultivar accumulates less toxic sodium in the photosynthetic tissues. This mechanism could be explained by the recirculation of the toxic ions Na+ into the xylem sap by SOS1 protein, which coordinates with HKT-like proteins to reduce the accumulation of Na+ ions in leaf blade. Interestingly, the expression of the three genes SOS1, HKT and NHX was enhanced under salinity especially in leaf blade of the cv. Turkey. Moreover, this wheat cultivar induced the antioxidative enzymes CAT and SOD activity more efficiently than the other cultivar.
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Affiliation(s)
- Sana Tounsi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, BP “1177”, 3018 Sfax, Tunisia
| | - Kaouthar Feki
- Laboratoire Des Légumineuses, Centre de Biotechnologie de Bordj Cedria, BP901, CP2050 Hammam-Lif, Tunisia
| | - Dorsaf Hmidi
- Laboratoire Des Plantes Extrêmophiles (LPE), Centre de Biotechnologie de Bordj Cedria, BP901, CP2050 Hammam-Lif, Tunisia
| | - Khaled Masmoudi
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, BP “1177”, 3018 Sfax, Tunisia
- Arid Land Department, College of Food and Agriculture, Present Address: United Arab Emirates University, P.O. Box 15551, Al Ain, United Arab Emirates
| | - Faiçal Brini
- Biotechnology and Plant Improvement Laboratory, Centre of Biotechnology of Sfax (CBS), University of Sfax, BP “1177”, 3018 Sfax, Tunisia
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Almeida DM, Oliveira MM, Saibo NJM. Regulation of Na+ and K+ homeostasis in plants: towards improved salt stress tolerance in crop plants. Genet Mol Biol 2017; 40:326-345. [PMID: 28350038 PMCID: PMC5452131 DOI: 10.1590/1678-4685-gmb-2016-0106] [Citation(s) in RCA: 226] [Impact Index Per Article: 32.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2016] [Accepted: 08/18/2016] [Indexed: 01/17/2023] Open
Abstract
Soil salinity is a major abiotic stress that results in considerable crop yield losses worldwide. However, some plant genotypes show a high tolerance to soil salinity, as they manage to maintain a high K+/Na+ ratio in the cytosol, in contrast to salt stress susceptible genotypes. Although, different plant genotypes show different salt tolerance mechanisms, they all rely on the regulation and function of K+ and Na+ transporters and H+ pumps, which generate the driving force for K+ and Na+ transport. In this review we will introduce salt stress responses in plants and summarize the current knowledge about the most important ion transporters that facilitate intra- and intercellular K+ and Na+ homeostasis in these organisms. We will describe and discuss the regulation and function of the H+-ATPases, H+-PPases, SOS1, HKTs, and NHXs, including the specific tissues where they work and their response to salt stress.
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Affiliation(s)
- Diego M Almeida
- Genomics of Plant Stress Unit, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa and Instituto de Biologia Experimental e Tecnológica, Oeiras, Portugal
| | - M Margarida Oliveira
- Genomics of Plant Stress Unit, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa and Instituto de Biologia Experimental e Tecnológica, Oeiras, Portugal
| | - Nelson J M Saibo
- Genomics of Plant Stress Unit, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa and Instituto de Biologia Experimental e Tecnológica, Oeiras, Portugal
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40
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Quan R, Wang J, Hui J, Bai H, Lyu X, Zhu Y, Zhang H, Zhang Z, Li S, Huang R. Improvement of Salt Tolerance Using Wild Rice Genes. FRONTIERS IN PLANT SCIENCE 2017; 8:2269. [PMID: 29387076 PMCID: PMC5776132 DOI: 10.3389/fpls.2017.02269] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2017] [Accepted: 12/27/2017] [Indexed: 05/20/2023]
Abstract
Salt stress causes significant reductions in rice production worldwide; thus, improving salt tolerance is a promising approach to meet the increasing food demand. Wild rice germplasm is considered a valuable genetic resource for improving rice cultivars. However, information regarding the improvement of salt tolerance in cultivated rice using wild rice genes is limited. In this study, we identified a salt-tolerant line Dongxiang/Ningjing 15 (DJ15) under salt-stress field conditions from the population of a salt tolerant Dongxiang wild rice × a cultivated rice variety Ningjing16 (NJ16). Genomic resequencing analysis of NJ16, DJ15 and Dongxiang wild rice revealed that the introgressed genomic fragments were unevenly distributed over the 12 chromosomes (Chr.) and mainly identified on Chr. 6, 7, 10, and 11. Using quantitative trait locus (QTL) mapping, we found 9 QTL for salt tolerance (qST) at the seedling stage located on Chr. 1, 3, 4, 5, 6, 8, and 10. In addition, sequence variant analysis within the QTL regions demonstrated that SKC1/HKT8/HKT1;5 and HAK6 transporters along with numerous transcriptional factors were the candidate genes for the salt tolerant QTL. The DJ15/Koshihikari recombinant inbred lines that contained both qST1.2 and qST6, two QTL with the highest effect for salt tolerance, were more tolerant than the parental lines under salt-stress field conditions. Furthermore, the qST6 near-isogenic lines with IR29 background were more tolerant than IR29, indicating that qST1.2 and qST6 could improve salt tolerance in rice. Overall, our study indicates that wild rice genes could markedly improve the salt tolerance of cultivated rice.
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Affiliation(s)
- Ruidang Quan
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China
- *Correspondence: Ruidang Quan
| | - Juan Wang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China
| | - Jian Hui
- Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China
| | - Haibo Bai
- Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China
| | - Xuelian Lyu
- Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China
| | - Yongxing Zhu
- Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China
| | - Haiwen Zhang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China
| | - Zhijin Zhang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China
| | - Shuhua Li
- Ningxia Academy of Agriculture and Forestry Sciences, Yinchuan, China
- Shuhua Li
| | - Rongfeng Huang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility of Crop Gene Resources and Genetic Improvement, Beijing, China
- Rongfeng Huang
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41
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Wang M, Lu X, Xu G, Yin X, Cui Y, Huang L, Rocha PSCF, Xia X. OsSGL, a novel pleiotropic stress-related gene enhances grain length and yield in rice. Sci Rep 2016; 6:38157. [PMID: 27917884 PMCID: PMC5137154 DOI: 10.1038/srep38157] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2016] [Accepted: 11/04/2016] [Indexed: 11/19/2022] Open
Abstract
Abiotic stress seriously affects the yield of rice (Oryza sativa L.). Grain yield in rice is multiplicatively determined by the number of panicles, number of grains per panicle, and grain weight. Here, we describe the molecular and functional characterization of STRESS_tolerance and GRAIN_LENGTH (OsSGL), a rice gene strongly up-regulated by a wide spectrum of abiotic stresses. OsSGL encodes a putative member of the DUF1645 protein family of unknown function. Overexpression of OsSGL significantly altered certain development processes greatly and positively affecting an array of traits in transgenic rice plants, including increased grain length, grain weight and grain number per panicle, resulting in a significant increase in yield. Microscopical analysis showed that the enhanced OsSGL expression promoted cell division and grain filling. Microarray and quantitative real-time PCR (qRT-PCR) analyses revealed that a large number of genes involved in stress-response, cell cycle and cytokinin signaling processes were induced or suppressed in OsSGL-overexpressing plants. Together, our results suggest that OsSGL may regulate stress-tolerance and cell growth by acting via a cytokinin signaling pathway. This study not only contributes to our understanding of the underlying mechanism regulating rice stress-tolerance and grain length, but also provides a strategy for tailor-made crop yield improvement.
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Affiliation(s)
- Manling Wang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Xuedan Lu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Guoyun Xu
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Xuming Yin
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Yanchun Cui
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Lifang Huang
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Pedro S C F Rocha
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
| | - Xinjie Xia
- Key Laboratory of Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha, Hunan 410125, China
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42
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Zhou Y, Lai Z, Yin X, Yu S, Xu Y, Wang X, Cong X, Luo Y, Xu H, Jiang X. Hyperactive mutant of a wheat plasma membrane Na +/H + antiporter improves the growth and salt tolerance of transgenic tobacco. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2016; 253:176-186. [PMID: 27968986 DOI: 10.1016/j.plantsci.2016.09.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2016] [Revised: 09/23/2016] [Accepted: 09/26/2016] [Indexed: 05/04/2023]
Abstract
Wheat SOS1 (TaSOS1) activity could be relieved upon deletion of the C-terminal 168 residues (the auto-inhibitory domain). This truncated form of wheat SOS1 (TaSOS1-974) was shown to increase compensation (compared to wild-type TaSOS1) for the salt sensitivity of a yeast mutant strain, AXT3K, via increased Na+ transportation out of cells during salinity stress. Expression of the plasma membrane proteins TaSOS1-974 or TaSOS1 improved the growth of transgenic tobacco plants compared with wild-type plants under normal conditions. However, plants expressing TaSOS1-974 grew better than TaSOS1-transformed plants. Upon salinity stress, Na+ efflux and K+ influx rates in the roots of transgenic plants expressing TaSOS1-974 or TaSOS1 were greater than those of wild-type plants. Furthermore, compared to TaSOS1-transgenic plants, TaSOS1-974-expressing roots showed faster Na+ efflux and K+ influx, resulting in less Na+ and more K+ accumulation in TaSOS1-974-transgenic plants compared to TaSOS1-transgenic and wild-type plants. TaSOS1-974-expressing plants had the lowest MDA content and electrolyte leakage among all tested plants, indicating that TaSOS1-974 might protect the plasma membrane against oxidative damage generated by salt stress. Overall, TaSOS1-974 conferred higher salt tolerance in transgenic plants compared to TaSOS1. Consistent with this result, transgenic plants expressing TaSOS1-974 showed a better growth performance than TaSOS1-expressing and wild-type plants under saline conditions.
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Affiliation(s)
- Yang Zhou
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China
| | - Zesen Lai
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China
| | - Xiaochang Yin
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China
| | - Shan Yu
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China
| | - Yuanyuan Xu
- National Key Laboratory of Wheat and Maize Crop Science/College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China
| | - Xiaoxiao Wang
- National Key Laboratory of Wheat and Maize Crop Science/College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China
| | - Xinli Cong
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China
| | - Yuehua Luo
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China
| | - Haixia Xu
- National Key Laboratory of Wheat and Maize Crop Science/College of Agronomy, Henan Agricultural University, Zhengzhou 450002, China.
| | - Xingyu Jiang
- National Key Laboratory for Sustainable Utilization of Tropical Bioresources/College of Agriculture, Hainan University, Haikou 570228, China.
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43
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Millar NS, Bennett AE. Stressed out symbiotes: hypotheses for the influence of abiotic stress on arbuscular mycorrhizal fungi. Oecologia 2016; 182:625-41. [PMID: 27350364 PMCID: PMC5043000 DOI: 10.1007/s00442-016-3673-7] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2016] [Accepted: 06/09/2016] [Indexed: 12/11/2022]
Abstract
Abiotic stress is a widespread threat to both plant and soil communities. Arbuscular mycorrhizal (AM) fungi can alleviate effects of abiotic stress by improving host plant stress tolerance, but the direct effects of abiotic stress on AM fungi are less well understood. We propose two hypotheses predicting how AM fungi will respond to abiotic stress. The stress exclusion hypothesis predicts that AM fungal abundance and diversity will decrease with persistent abiotic stress. The mycorrhizal stress adaptation hypothesis predicts that AM fungi will evolve in response to abiotic stress to maintain their fitness. We conclude that abiotic stress can have effects on AM fungi independent of the effects on the host plant. AM fungal communities will change in composition in response to abiotic stress, which may mean the loss of important individual species. This could alter feedbacks to the plant community and beyond. AM fungi will adapt to abiotic stress independent of their host plant. The adaptation of AM fungi to abiotic stress should allow the maintenance of the plant-AM fungal mutualism in the face of changing climates.
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Affiliation(s)
- Niall S Millar
- School of Life Sciences, University of Dundee, Dundee, DD1 4HN, UK
| | - Alison E Bennett
- Ecological Sciences, James Hutton Institute, Errol Road, Invergowrie, Dundee, DD2 5DA, UK.
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44
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Park HJ, Kim WY, Yun DJ. A New Insight of Salt Stress Signaling in Plant. Mol Cells 2016; 39:447-59. [PMID: 27239814 PMCID: PMC4916396 DOI: 10.14348/molcells.2016.0083] [Citation(s) in RCA: 151] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2016] [Revised: 05/06/2016] [Accepted: 05/16/2016] [Indexed: 12/12/2022] Open
Abstract
Many studies have been conducted to understand plant stress responses to salinity because irrigation-dependent salt accumulation compromises crop productivity and also to understand the mechanism through which some plants thrive under saline conditions. As mechanistic understanding has increased during the last decades, discovery-oriented approaches have begun to identify genetic determinants of salt tolerance. In addition to osmolytes, osmoprotectants, radical detoxification, ion transport systems, and changes in hormone levels and hormone-guided communications, the Salt Overly Sensitive (SOS) pathway has emerged to be a major defense mechanism. However, the mechanism by which the components of the SOS pathway are integrated to ultimately orchestrate plant-wide tolerance to salinity stress remains unclear. A higher-level control mechanism has recently emerged as a result of recognizing the involvement of GIGANTEA (GI), a protein involved in maintaining the plant circadian clock and control switch in flowering. The loss of GI function confers high tolerance to salt stress via its interaction with the components of the SOS pathway. The mechanism underlying this observation indicates the association between GI and the SOS pathway and thus, given the key influence of the circadian clock and the pathway on photoperiodic flowering, the association between GI and SOS can regulate growth and stress tolerance. In this review, we will analyze the components of the SOS pathways, with emphasis on the integration of components recognized as hallmarks of a halophytic lifestyle.
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Affiliation(s)
- Hee Jin Park
- Division of Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center, Jinju 52828,
Korea
| | - Woe-Yeon Kim
- Division of Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center, Jinju 52828,
Korea
- Institute of Agriculture & Life Sciences, Graduate School of Gyeongsang National University, Jinju 52828,
Korea
| | - Dae-Jin Yun
- Division of Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center, Jinju 52828,
Korea
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45
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Transcriptome analysis in different rice cultivars provides novel insights into desiccation and salinity stress responses. Sci Rep 2016; 6:23719. [PMID: 27029818 PMCID: PMC4814823 DOI: 10.1038/srep23719] [Citation(s) in RCA: 120] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2015] [Accepted: 03/14/2016] [Indexed: 01/18/2023] Open
Abstract
Drought and salinity are the major environmental factors that affect rice productivity. Comparative transcriptome analysis between tolerant and sensitive rice cultivars can provide insights into the regulatory mechanisms involved in these stress responses. In this study, the comparison of transcriptomes of a drought-tolerant [Nagina 22 (N22)] and a salinity-tolerant (Pokkali) rice cultivar with IR64 (susceptible cultivar) revealed variable transcriptional responses under control and stress conditions. A total of 801 and 507 transcripts were exclusively differentially expressed in N22 and Pokkali rice cultivars, respectively, under stress conditions. Gene ontology analysis suggested the enrichment of transcripts involved in response to abiotic stress and regulation of gene expression in stress-tolerant rice cultivars. A larger number of transcripts encoding for members of NAC and DBP transcription factor (TF) families in N22 and members of bHLH and C2H2 TF families in Pokkali exhibited differential regulation under desiccation and salinity stresses, respectively. Transcripts encoding for thioredoxin and involved in phenylpropanoid metabolism were up-regulated in N22, whereas transcripts involved in wax and terpenoid metabolism were up-regulated in Pokkali. Overall, common and cultivar-specific stress-responsive transcripts identified in this study can serve as a helpful resource to explore novel candidate genes for abiotic stress tolerance in rice.
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46
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Nath M, Yadav S, Kumar Sahoo R, Passricha N, Tuteja R, Tuteja N. PDH45 transgenic rice maintain cell viability through lower accumulation of Na(+), ROS and calcium homeostasis in roots under salinity stress. JOURNAL OF PLANT PHYSIOLOGY 2016; 191:1-11. [PMID: 26687010 DOI: 10.1016/j.jplph.2015.11.008] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2015] [Revised: 11/23/2015] [Accepted: 11/25/2015] [Indexed: 05/25/2023]
Abstract
Salinity severely affects the growth/productivity of rice, which is utilized as major staple food crop worldwide. PDH45 (pea DNA helicase 45), a member of the DEAD-box helicase family, actively provides salinity stress tolerance, but the mechanism behind this is not well known. Therefore, in order to understand the mechanism of stress tolerance, sodium ion (Na(+)), reactive oxygen species (ROS), cytosolic calcium [Ca(2+)]cyt and cell viability were analyzed in roots of PDH45 transgenic-IR64 rice lines along with wild-type (WT) IR64 rice under salinity stress (100mM and 200 mM NaCl). In addition, the roots of salinity-tolerant (FL478) and susceptible (Pusa-44) rice varieties were also analyzed under salinity stress for comparative analysis. The results reveal that, under salinity stress (100mM and 200 mM NaCl), roots of PDH45 transgenic lines accumulate lower levels of Na(+), ROS and maintain [Ca(2+)]cyt and exhibit higher cell viability as compared with roots of WT (IR64) plants. Similar results were also obtained in the salinity-tolerant FL478 rice. However, the roots of WT and salinity-susceptible Pusa-44 rice accumulated higher levels of Na(+), ROS and [Ca(2+)]cyt imbalance and lower cell viability during salinity stress, which is in contrast to the overexpressing PDH45 transgenic lines and salinity-tolerant FL478 rice. Further, to understand the mechanism of PDH45 at molecular level, comparative expression profiling of 12 cation transporters/genes was also conducted in roots of WT (IR64) and overexpressing PDH45 transgenic lines (L1 and L2) under salt stress (24h of 200 mM NaCl). The expression analysis results show altered and differential gene expression of cation transporters/genes in salt-stressed roots of WT (IR64) and overexpressing transgenic lines (L1 and L2). These observations collectively suggest that, under salinity stress conditions, PDH45 is involved in the regulation of Na(+) level, ROS production, [Ca(2+)]cyt homeostasis, cell viability and cation transporters in roots of PDH45 transgenic-IR64 rice and consequently provide salinity tolerance. Elucidating the detailed regulatory mechanism of PDH45 will provide a better understanding of salinity stress tolerance and further open new ways to manipulate genome to achieve higher agricultural production under stress.
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Affiliation(s)
- Manoj Nath
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110 067 New Delhi, India
| | - Sandep Yadav
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110 067 New Delhi, India
| | - Ranjan Kumar Sahoo
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110 067 New Delhi, India
| | - Nishat Passricha
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110 067 New Delhi, India
| | - Renu Tuteja
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110 067 New Delhi, India
| | - Narendra Tuteja
- International Centre for Genetic Engineering and Biotechnology, Aruna Asaf Ali Marg, 110 067 New Delhi, India; Amity Institute of Microbial Technology, Amity University Uttar Pradesh, Sector 125, Noida, Uttar Pradesh 201313, India.
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47
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Joshi R, Wani SH, Singh B, Bohra A, Dar ZA, Lone AA, Pareek A, Singla-Pareek SL. Transcription Factors and Plants Response to Drought Stress: Current Understanding and Future Directions. FRONTIERS IN PLANT SCIENCE 2016; 7:1029. [PMID: 27471513 PMCID: PMC4943945 DOI: 10.3389/fpls.2016.01029] [Citation(s) in RCA: 339] [Impact Index Per Article: 42.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2016] [Accepted: 06/30/2016] [Indexed: 05/18/2023]
Abstract
Increasing vulnerability of plants to a variety of stresses such as drought, salt and extreme temperatures poses a global threat to sustained growth and productivity of major crops. Of these stresses, drought represents a considerable threat to plant growth and development. In view of this, developing staple food cultivars with improved drought tolerance emerges as the most sustainable solution toward improving crop productivity in a scenario of climate change. In parallel, unraveling the genetic architecture and the targeted identification of molecular networks using modern "OMICS" analyses, that can underpin drought tolerance mechanisms, is urgently required. Importantly, integrated studies intending to elucidate complex mechanisms can bridge the gap existing in our current knowledge about drought stress tolerance in plants. It is now well established that drought tolerance is regulated by several genes, including transcription factors (TFs) that enable plants to withstand unfavorable conditions, and these remain potential genomic candidates for their wide application in crop breeding. These TFs represent the key molecular switches orchestrating the regulation of plant developmental processes in response to a variety of stresses. The current review aims to offer a deeper understanding of TFs engaged in regulating plant's response under drought stress and to devise potential strategies to improve plant tolerance against drought.
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Affiliation(s)
- Rohit Joshi
- Plant Stress Biology, International Centre for Genetic Engineering and BiotechnologyNew Delhi, India
| | - Shabir H. Wani
- Division of Genetics and Plant Breeding, Sher-e-Kashmir University of Agricultural Sciences and Technology of KashmirSrinagar, India
| | - Balwant Singh
- National Research Centre on Plant BiotechnologyNew Delhi, India
| | - Abhishek Bohra
- Crop Improvement Division, Indian Institute of Pulses ResearchKanpur, India
| | - Zahoor A. Dar
- Dryland Agricultural Research Station, Sher-e-Kashmir University of Agricultural Sciences and Technology of KashmirBudgam, India
| | - Ajaz A. Lone
- Dryland Agricultural Research Station, Sher-e-Kashmir University of Agricultural Sciences and Technology of KashmirBudgam, India
| | - Ashwani Pareek
- Stress Physiology and Molecular Biology Laboratory, School of Life Sciences, Jawaharlal Nehru UniversityNew Delhi, India
| | - Sneh L. Singla-Pareek
- Plant Stress Biology, International Centre for Genetic Engineering and BiotechnologyNew Delhi, India
- *Correspondence: Sneh L. Singla-Pareek,
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48
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Agarwal P, Dabi M, Sapara KK, Joshi PS, Agarwal PK. Ectopic Expression of JcWRKY Transcription Factor Confers Salinity Tolerance via Salicylic Acid Signaling. FRONTIERS IN PLANT SCIENCE 2016; 7:1541. [PMID: 27799936 PMCID: PMC5065966 DOI: 10.3389/fpls.2016.01541] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2016] [Accepted: 09/30/2016] [Indexed: 05/08/2023]
Abstract
Plants, being sessile, have developed intricate signaling network to specifically respond to the diverse environmental stress. The plant-specific WRKY TFs form one of the largest TF family and are involved in diverse plant processes, involving growth, development and stress signaling through auto and cross regulation with different genes and TFs. Here, we report the functional characterization of a salicylic acid -inducible JcWRKY TF. The JcWRKY overexpression confers salinity tolerance in transgenic tobacco, as was evident by increased chlorophyll content and seed germination potential. The transgenic plants showed increased soluble sugar, membrane stability, reduced electrolyte leakage and generation of reactive oxygen species (H2O2 and [Formula: see text]) as compared to the wild type. Furthermore, the low SA treatment along with salinity improved the tolerance potential of the transgenics by maintaining ROS homeostasis and high K+/Na+ ratio. The transcript expression of SA biosynthetic gene ICS1 and antioxidative enzymes (CAT and SOD) showed upregulation during stress. Thus, the present study reflects that JcWRKY is working in co-ordination with SA signaling to orchestrate the different biochemical and molecular pathways to maneuvre salt stress tolerance of the transgenic plants.
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Affiliation(s)
- Parinita Agarwal
- Plant Omics Division, Central Salt and Marine Chemicals Research Institute (CSIR) – Council of Scientific and Industrial ResearchBhavnagar, India
- *Correspondence: Parinita Agarwal,
| | - Mitali Dabi
- Plant Omics Division, Central Salt and Marine Chemicals Research Institute (CSIR) – Council of Scientific and Industrial ResearchBhavnagar, India
- Academy of Scientific and Innovative Research, Central Salt and Marine Chemicals Research Institute –Council of Scientific and Industrial ResearchBhavnagar, India
| | - Komal K. Sapara
- Plant Omics Division, Central Salt and Marine Chemicals Research Institute (CSIR) – Council of Scientific and Industrial ResearchBhavnagar, India
- Academy of Scientific and Innovative Research, Central Salt and Marine Chemicals Research Institute –Council of Scientific and Industrial ResearchBhavnagar, India
| | - Priyanka S. Joshi
- Plant Omics Division, Central Salt and Marine Chemicals Research Institute (CSIR) – Council of Scientific and Industrial ResearchBhavnagar, India
- Academy of Scientific and Innovative Research, Central Salt and Marine Chemicals Research Institute –Council of Scientific and Industrial ResearchBhavnagar, India
| | - Pradeep K. Agarwal
- Plant Omics Division, Central Salt and Marine Chemicals Research Institute (CSIR) – Council of Scientific and Industrial ResearchBhavnagar, India
- Academy of Scientific and Innovative Research, Central Salt and Marine Chemicals Research Institute –Council of Scientific and Industrial ResearchBhavnagar, India
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49
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Djemal R, Khoudi H. Isolation and molecular characterization of a novel WIN1/SHN1 ethylene-responsive transcription factor TdSHN1 from durum wheat (Triticum turgidum. L. subsp. durum). PROTOPLASMA 2015; 252:1461-73. [PMID: 25687296 DOI: 10.1007/s00709-015-0775-8] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Accepted: 01/29/2015] [Indexed: 05/27/2023]
Abstract
Over the last decade, APETALA2/Ethylene Responsive Factor (AP2/ERF) proteins have become the subject of intensive research activity due to their involvement in a variety of biological processes. This research led to the identification of AP2/ERF genes in many species; however, little is known about these genes in durum wheat, one of the most important cereal crops in the world. In this study, a new member of the AP2/ERF transcription factor family, designated TdSHN1, was isolated from durum wheat using thermal asymetric interlaced PCR (TAIL-PCR) method. Protein sequence analysis showed that TdSHN1 contained an AP2/ERF domain of 63 amino acids and a putative nuclear localization signal (NLS). Phylogenetic analysis showed that TdSHN1 belongs to a group Va protein in the ERF subfamily which contains the Arabidopsis ERF proteins (SHN1, SHN2, and SHN3). Expression of TdSHN1 was strongly induced by salt, drought, abscisic acid (ABA), and cold. In planta, TdSHN1 protein was able to activate the transcription of GUS reporter gene driven by the GCC box and DRE element sequences. In addition, TdSHN1 was targeted to the nucleus when transiently expressed in tobacco epidermal cells. In transgenic yeast, overexpression of TdSHN1 increased tolerance to multiple abiotic stresses. Taken together, the results showed that TdSHN1 encodes an abiotic stress-inducible, transcription factor which confers abiotic stress tolerance in yeast. TdSHN1 is therefore a promising candidate for improvement of biotic and abiotic stress tolerance in wheat as well as other crops.
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Affiliation(s)
- Rania Djemal
- Laboratory of Plant Protection and Improvement, Center of Biotechnology of Sfax, University of Sfax, B.P' 1177, Route Sidi Mansour Km 6, 3018, Sfax, Tunisia
| | - Habib Khoudi
- Laboratory of Plant Protection and Improvement, Center of Biotechnology of Sfax, University of Sfax, B.P' 1177, Route Sidi Mansour Km 6, 3018, Sfax, Tunisia.
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Kurotani KI, Yamanaka K, Toda Y, Ogawa D, Tanaka M, Kozawa H, Nakamura H, Hakata M, Ichikawa H, Hattori T, Takeda S. Stress Tolerance Profiling of a Collection of Extant Salt-Tolerant Rice Varieties and Transgenic Plants Overexpressing Abiotic Stress Tolerance Genes. PLANT & CELL PHYSIOLOGY 2015; 56:1867-76. [PMID: 26329877 DOI: 10.1093/pcp/pcv106] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2015] [Accepted: 07/10/2015] [Indexed: 05/22/2023]
Abstract
Environmental stress tolerance is an important trait for crop improvement. In recent decades, numerous genes that confer tolerance to abiotic stress such as salinity were reported. However, the levels of salt tolerance differ greatly depending on growth conditions, and mechanisms underlying the complicated nature of stress tolerance are far from being fully understood. In this study, we investigated the profiles of stress tolerance of nine salt-tolerant rice varieties and transgenic rice lines carrying constitutively expressed genes that are potentially involved in salt tolerance, by evaluating their growth and viability under salt, heat, ionic and hyperosmotic stress conditions. Profiling of the extant varieties and selected chromosome segment substitution lines showed that salt tolerance in a greenhouse condition was more tightly correlated with ionic stress tolerance than osmotic stresses. In Nona Bokra, one of the most salt-tolerant varieties, the contribution of the previously identified sodium transporter HKT1;5 to salt tolerance was fairly limited. In addition, Nona Bokra exhibited high tolerance to all the stresses imposed. More surprisingly, comparative evaluation of 74 stress tolerance genes revealed that the most striking effect to enhance salt tolerance was conferred by overexpressing CYP94C2b, which promotes deactivation of jasmonate. In contrast, genes encoding ABA signaling factors conferred multiple stress tolerance. Genes conferring tolerance to both heat and hyperosmotic stresses were preferentially linked to functional categories related to heat shock proteins, scavenging of reactive oxygen species and Ca(2+) signaling. These comparative profiling data provide a new basis for understanding the ability of plants to grow under harsh environmental conditions.
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Affiliation(s)
- Ken-ichi Kurotani
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
| | - Kazumasa Yamanaka
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
| | - Yosuke Toda
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan Graduate School of Science, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
| | - Daisuke Ogawa
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan National Institute of Agrobiological Sciences, Kannondai, Tsukuba, 305-8602 Japan
| | - Maiko Tanaka
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
| | - Hirotsugu Kozawa
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
| | - Hidemitsu Nakamura
- National Institute of Agrobiological Sciences, Kannondai, Tsukuba, 305-8602 Japan Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo, 113-8657 Japan
| | - Makoto Hakata
- National Institute of Agrobiological Sciences, Kannondai, Tsukuba, 305-8602 Japan Lowland Farming Research Division, NARO Kyushu Okinawa Agricultural Research Center, Izumi 496, Chikugo, Fukuoka, 833-0041 Japan
| | - Hiroaki Ichikawa
- National Institute of Agrobiological Sciences, Kannondai, Tsukuba, 305-8602 Japan
| | - Tsukaho Hattori
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
| | - Shin Takeda
- Bioscience and Biotechnology Center, Nagoya University, Chikusa, Nagoya, 464-8601 Japan
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