Butanol extraction to predict bioavailability of PAHs in soil

Modelling polycyclic aromatic hydrocarbon bioavailability in historically contaminated soils with six in-vitro chemical extractions and three earthworm ecotypes

Accurate prediction of organic contaminant bioavailability for risk assessment in ecological applications is hindered by limited validation on relevant bioassay species. Here, six in-vitro chemical extraction methods (butanol, non-buffered and buffered hydroxypropyl-β-cyclodextrin (HPCD, Buf-HPCD), Tenax, potassium persulfate oxidation, polyoxymethylene solid phase extraction (POM)) were tested for PAH bioaccumulation prediction in three earthworm ecotypes with dissimilar exposures, Amynthas sp., Eisenia fetida, and Lumbricus terrestris, in historically contaminated soils from manufactured gas plant (MGP) sites. Extractions were compared directly and modelled in a calculation approach using equilibrium partitioning theory (EqPT) with a novel combination of different organic carbon/octanol-water partitioning parameters (K_OC and K_OW). In the direct comparison approach Buf-HPCD showed the closest prediction of accumulation for burrowing Amynthas sp. and L. terrestris (within 1.5 and 3.1, respectively), but Tenax and POM showed the closest approximation for E. fetida (within 1.1 and 0.9, respectively). The optimum method for predicting PAH bioaccumulation in the calculation approach depended on earthworm species and the partitioning parameters used in equations of the four models, but overall POM, which was independent of K_OC, showed the closest approximation of accumulation, within a factor of 2.5 across all species. This work effectively identifies the optimum in-vitro based approaches for PAH bioavailability prediction in earthworms as a model soil health indicator for ecological risk assessment within regulatory and remediation decision frameworks.

Past, present, and future perspectives on the assessment of bioavailability/bioaccessibility of polycyclic aromatic hydrocarbons: A 20-year systemic review based on scientific econometrics

Bioaccessibility/bioavailability (bioac-bioav) is an important criterion in the risk assessment of polycyclic aromatic hydrocarbons (PAHs), especially in the restoration of contaminated sites. Although, the bioac-bioav concept is widely employed in PAH risk assessment for both humans and wildlife, their growth and integration in risk assessment models are seldom discussed. Consequently, the relevant literature listed on Web of Science (WOS)™ was retrieved and analyzed using the bibliometric software Citespace in order to gain a comprehensive understanding of this issue. Due to the limitations of the literature search software, we manually searched the articles about PAHs bioac-bioav that were published before 2000. This stage focuses on research on the distribution coefficient of PAHs between different environmental phases and laid the foundation for the adsorption-desorption of PAHs in subsequent studies of the bioac-bioav of PAHs. The research progress on PAH bioac-bioav from 2000 to the present was evaluated using the Citespace software based on country- and discipline-wise publication volumes and research hotspots. The development stages of PAH bioac-bioav after 2000 were divided into four time segments. The first three segments (2000-2005, 2006-2010, and 2011-2015) focused on the degradation of PAHs and their in vivo (bioavailability)-in vitro (bioaccessibility) evaluation method and risk assessment. Meanwhile, the current (2016-present) research focuses on the establishment of analytical methods for assessing PAH derivatives at environmental concentrations and the optimization of various in vitro digestion methods, including chemical optimization (sorptive sink) and biological optimization (Caco-2 cell). The contents are aimed at supplying researchers with a deeper understanding of the development of PAH bioac-bioav.

Distribution and bioaccessibility of polycyclic aromatic hydrocarbons in industrially contaminated site soils as affected by thermal treatment

Thermal treatment can not only efficiently remove volatile pollutants but also distinctly alter the speciation of organic carbon (C) and the behaviors of residual pollutants in contaminated soils. Here we examined the distribution and bioaccessibility of polycyclic aromatic hydrocarbons (PAHs) in industrially contaminated site soils affected by thermal treatment (temperature ranging of 105-650 ℃) using synchrotron-based infrared microspectroscopy and n-butanol extraction (a mild solvent extractant). In the pristine soils, the sequestration and distribution of PAHs were simultaneously controlled by aromatic C, aliphatic C and clay minerals. Desorption efficiency of PAHs was substantially increased with increasing temperature, whereas the residual PAHs were strongly immobilized within their binding sites evidenced by their dramatically decreased bioaccessibility. Aliphatic and carboxylic C were gradually decomposed and/or carbonized with increasing temperature. In contrast, aromatic C remained relatively recalcitrant during the thermal treatment and was the key controlling factor for the desorption of residual PAHs in the soils with either thermal treatment or n-butanol extraction. This study is the first to visualize the changes in the binding sites and bioaccessibility of PAHs induced by thermal treatment, which have important implications for understanding the sequestration mechanisms of organic pollutants in soil and optimizing the remediation technique.

Multistep thermodesorption coupled with molecular analyses as a quick, easy and environmentally friendly way to measure PAH availability in contaminated soils

Whether it is for risk assessment or for remediation purpose, contaminant availability in polluted soils is a key parameter to determine. Two methods were recently standardized for the estimation of the environmental available fraction of non-polar organics but, in some cases, their application on real historically contaminated soils does not provide satisfactory results. The present study aimed at proposing an alternative method for the estimation of PAH availability in soils, based on analytical thermal desorption and molecular analyses with the hypothesis that the binding strength between PAH and the solid matrix is linked to the desorption temperature. This hypothesis was validated by comparing the thermodesorption molecular distribution of different contaminated soils and of their respective extractable organic matter. Then, comparing the thermodesorption profiles of each studied PAH to the efficiency of biological and chemical remediation treatments through principal component analysis allowed obtaining the desorption temperature corresponding to PAH fractions available towards both treatments. This method was proven to effectively estimate the PAH fraction available towards biological (microbial incubation) and chemical (KMnO₄ oxidation) treatments and present multiple advantages such as being fast, easy to execute and solvent free.

Responsiveness change of biochemistry and micro-ecology in alkaline soil under PAHs contamination with or without heavy metal interaction

Co-presence of organic pollutants and heavy metals in soil is causing increasing concerns, but the lack of knowledge of relation between soil ecology and pollutant fate is limiting the developing of specific control strategy. This study investigated soil change under pyrene stress and its interaction with cadmium (Cd). Soil physicochemical properties were not seriously influenced. However, pollutants' presence easily varied soil microbial activity, quantity, and diversity. Under high-level pyrene, Cd presence contributed to soil indigenous microorganisms' adaption and soil microbial community structure stability. Soils with both pyrene and Cd presented 7.11-12.0% higher pyrene degradation compared with single pyrene treatment. High-throughput sequencing analysis indicated the proportion of Mycobacterium sp., a commonly known PAHs degrader, increased to 25.2-48.5% in treatments from 0.52% in control. This phenomenon was consistent with the increase of PAHs probable degraders (the ratio increased to 2.86-6.57% from 0.24% in control). Higher Cd bioavailability was also observed in soils with both pollutants than that with Cd alone. And Cd existence caused the elevation of Cd resistant bacterium Limnobacter sp. (increased to 12.2% in CdCK from 2.06% in control). Functional gene prediction also indicated that abundance of genes related to nutrient metabolism decreased dramatically with pollutants, while the abundances of energy metabolism, lipid metabolism, secondary metabolites biosynthesis-related genes increased (especially for aromatic compound degradation related genes). These results indicated the mutual effect and internal-interaction existed between pollutants and soils resulted in pollutants' fate and soil microbial changes, providing further information regarding pollutants dissipation and transformation under soil microbial response.

Alternative Evaluation to Earthworm Toxicity Test in Polychlorinated Biphenyls Spiked and Remediated Soils

Polychlorinated biphenyls (PCBs) are a class of persistent organic pollutants that pose a threat to environment and human health. Aiming at predicting PCBs risk in actual soil ecosystem, this study was conducted by chemical and biological methods to assess the bioavailability of PCBs in spiked soil, and in field-contaminated soils before or after remediation. The three chemical methods were Soxhlet, n-butanol and hydroxypropyl-β-cyclodextrin (HPCD). Results were compared to actual PCB bioaccumulation in earthworms (Eisenia fetida). HPCD extraction was the best to predict the actual PCB bioaccumulation in all soils. The results suggest that HPCD could be an effective alternative method to earthworm toxicity test. This study provides strategy to understand the toxicity assessment in contaminated soil and soil after remediation.

Non-bioavailability of extracellular 1-hydroxy-2-naphthoic acid restricts the mineralization of phenanthrene by Rhodococcus sp. WB9

Rhodococcus sp. WB9, a strain isolated from polycyclic aromatic hydrocarbons contaminated soil, degraded phenanthrene (PHE, 100 mg L^-1) completely within 4 days. 18 metabolites were identified during PHE degradation, including 5 different hydroxyphenanthrene compounds resulted from multiple routes of initial monooxygenase attack. Initial dioxygenation dominantly occurred on 3,4-C positions, followed by meta-cleavage to form 1-hydroxy-2-naphthoic acid (1H2N). More than 95.2% of 1H2N was transported to and kept in extracellular solution without further degradation. However, intracellular 1H2N was converted to 1,2-naphthalenediol that was branched to produce salicylate and phthalate. Furthermore, 131 genes in strain WB9 genome were related to aromatic hydrocarbons catabolism, including the gene coding for salicylate 1-monooxygenase that catalyzed the oxidation of 1H2N to 1,2-naphthalenediol, and complete gene sets for the transformation of salicylate and phthalate toward tricarboxylic acid (TCA) cycle. Metabolic and genomic analyses reveal that strain WB9 has the ability to metabolize intracellular 1H2N to TCA cycle intermediates, but the extracellular 1H2N can't enter the cells, restricting 1H2N bioavailability and PHE mineralization.

Atmospheric carbonation reduces bioaccessibility of PAHs in industrially contaminated soil

Sorptive Bioaccessibility Extraction (SBE) was used to monitor changes in accessibility of polycyclic aromatic hydrocarbons (PAHs) during storage of historically contaminated alkaline soil (Σ US EPA 16 + 2 further PAHs: 2452 ± 69 mg kg^-1, n = 3). While total concentrations of PAHs were rather stable during storage for 561 days at 4 °C, PAH accessibility declined by 95% due to atmospheric carbonation. The formation of carbonates was evidenced by an increase of inorganic soil carbon and by carbonate coatings on black soil particles (SEM-EDX) that could be dissolved by providing neutral to acidic soil conditions. Subjecting soil (252 days of storage) to biodegradation at pH 7 resulted in a degraded fraction of PAHs equivalent to the accessible PAH fraction of soil as received (PAHs with log K_ow <5). The present study addresses important interactions and relationships between carbonation of soil, aging of PAHs in soil and related changes in PAH accessibility. A main finding was the reversibility of this retention mechanism, a changing environment (e.g. reduction of pH below 8) can result in a rise of accessible PAHs and consequently in an increase of exposure and associated risk.

Extremely small amounts of B[a]P residues remobilised in long-term contaminated soils: A strong case for greater focus on readily available and not total-extractable fractions in risk assessment

There is a lack of understanding about the potential for remobilisation of polycyclic aromatic hydrocarbons (PAHs) residues in soils, specifically after the removal of readily available fractions, and the likelihood to cause harm to human and environmental health. Sequential solvent extractions, using butanol (BuOH), dichloromethane/acetone, and methanolic saponification were used to investigate the time-dependent remobilisation of B[a]P residues in aged soils, after removal of readily available or total-extractable fractions. After 120 d of aging, BuOH-remobilised B[a]P were small or extremely small ranging from 2.3 ± 0.1 mg/kg to 4.5 ± 0.5 mg/kg and from 0.9 ± 0.0 mg/kg to 1.0 ± 0.1 mg/kg, after removal of readily available and total-extractable fractions, respectively. After removal of readily available fractions, the remobilisation rates of B[a]P residues were constant over 5 re-equilibration times, as shown by first-order kinetics. The amounts of B[a]P remobilised significantly (p < 0.05) decreased with aging, particularly in hard organic carbon-rich soils. After 4 years of aging, BuOH- and total-remobilised B[a]P were generally < 5% of the initially spiked 50 mg/kg. Based on the findings of this study, the potential or significant potential for B[a]P NERs in soils to cause significant harm to human and environmental health are minimal.

Discussion on the technical note entitled, "public health risk assessment following exposure to PAH-contaminated soils - specific considerations for bioaccessibility and other exposure parameters"

This is a discussion on the technical note entitled, "Public Health Risk Assessment following Exposure to PAH-contaminated Soils - Specific Considerations for Bioaccessibility and Other Exposure Parameters". Presence of some serious issues in the technical note on understanding the scopes and concepts of the original research article have been highlighted. The prevailing unclear definition of bioaccessibility and bioavailability in the scientific community may have been caused the misunderstanding of the scope of our original study. On an effort to clear this idea we feel privileged to write this discussion.

Accumulation of metals and polycyclic aromatic hydrocarbons in agricultural soil after additions of street sediment in southern Ontario

Prior to 2012 street sediment from the Greater Toronto Area was being managed by a local authority and provided to rural landowners under the assumption it was clean fill. The aim of this study was to characterise the chemical and physical composition of that street sediment applied to an agricultural field in southwestern Ontario, Canada and determine if contaminants had migrated to native soil. Soil was sampled from an impact and a background location during the fall of 2016 at four soil depths (0-10, 10-20, 20-30 and 30-40 cm below the surface) to characterise texture, pH, organic content, recoverable metals and total polycyclic aromatic hydrocarbons (PAHs). Textural analysis revealed street sediment was dominated by very coarse and coarse sand which differed from the native silty clay loam and extended to 30 cm below the surface. Some PAHs, including benzo(a)pyrene (1.29 μg g^-1) exceeded the typical regional background concentrations. A distinct pattern of high molecular mass PAHs in the native soil below street sediments suggests that PAHs have migrated to native soil. To our knowledge this is the first study to report PAH concentrations in street sediment in Ontario and to show their potential movement and introduction to native soil. Future studies should focus on transport mechanisms and understanding movement of PAHs in native coarse textured soil.

Time-Dependent Remobilization of Nonextractable Benzo[a]pyrene Residues in Contrasting Soils: Effects of Aging, Spiked Concentration, and Soil Properties

The environmental and health risks associated with "nonextractable" residues (NERs) of polycyclic aromatic hydrocarbons in soils and their potential for remobilization remain largely unexplored. In this novel study, sequential solvent extractions were employed to interrogate time-dependent remobilization of benzo[a]pyrene (B[a]P) NERs and associated kinetics after re-equilibration (REQ) periods lasting 30 d in four artificially spiked soils aged for up to 200 days. Following sequential extractions of the re-equilibrated soils, remobilization of B[a]P NERs was observed and further confirmed by decreases in the absolute amounts of B[a]P recovered following methanolic saponification after REQ. Remobilization may occur through slow intercompartmental partitioning of more sequestered into less sequestered B[a]P fractions in soils. The amounts of B[a]P remobilized in soils decreased throughout aging following first-order kinetics, and the rates of decrease were slow but 2 to 4 times faster than those of extractable B[a]P before re-equilibration. Sandy-clay-loam soils with large amounts of hard organic carbon exhibited less NER remobilization compared to sandy soils. The amounts of remobilized B[a]P decreased significantly ( p < 0.05) with aging. Specifically, butanol-remobilized B[a]P in soils spiked at 10 mg/kg and 50 mg/kg B[a]P ranged from 0.15 to 0.39 mg/kg and 0.67 to 2.30 mg/kg, respectively, after 200 d of aging.

Bioavailability of weathered hydrocarbons in engine oil-contaminated soil: Impact of bioaugmentation mediated by Pseudomonas spp. on bioremediation

Heavier fraction hydrocarbons (C₁₅-C₃₆) formed in soil after biotic and abiotic weatherings of engine oil are the continuing constraints in the bioremediation strategy, and their bioavailability remains a poorly quantified regulatory factor. In a microcosm study, we used two strains of Pseudomonas, P. putida TPHK-1 and P. aeruginosa TPHK-4, in strategies of bioremediation, viz., natural attenuation, biostimulation and bioaugmentation, for removal of weathered total petroleum hydrocarbons (TPHs) in soil contaminated long-term with high concentrations of engine oil (39,000-41,000 mg TPHs kg^-1 soil). Both the bacterial strains exhibited a great potential in remediating weathered hydrocarbons of engine oil. Addition of inorganic fertilizers (NPK), at recommended levels for bioremediation, resulted in significant inhibition in biostimulation/enhanced natural attenuation as well as bioaugmentation. The data on dehydrogenase activity clearly confirmed those of bioremediation strategies used, indicating that this enzyme assay could serve as an indicator of bioremediation potential of oil-contaminated soil. Extraction of TPHs from engine oil-contaminated soil with hydroxypropyl-β-cyclodextrin (HPCD), but not 1-butanol, was found reliable in predicting the bioavailability of weathered hydrocarbons. Also, 454 pyrosequencing data were in accordance with those of bioremediation strategies used in the present microcosm study, suggesting the possible use of pyrosequencing in designing approaches for bioremediation.

A new approach to estimate bioavailability of pyrethroids in soil by compound-specific stable isotope analysis

In this study, the microbial degradation of six pyrethroids (bifenthrin, fenpropathrin, permethrin, α-cypermethrin, fenvalerate and deltamethrin) was investigated in soil to develop a new approach to estimate bioavailability of pyrethoids by compound-specific stable isotope analysis (CSIA). After 56-day incubation, the residual concentrations of pyrethroids in unsterilized soil were much lower than those in sterilized soil, indicating that microbial degradation was dominant for the elimination of pyrethroids. Meanwhile, the stable carbon isotope ratios of the six pyrethroids were determined during the degradation. Significant stable carbon isotope fractionation was observed during the microbial degradation of fenpropathrin, α-cypermethrin and deltamethrinhe. The enrichment factor ε was determined as -1.88‰, -1.82‰ and -2.00‰, respectively. A new approach was then developed to estimate the bioavailability of the three pyrethroids by determining stable carbon isotope ratios. The approach established in the study provides an alternative method to dynamically and quantitatively estimate bioavailability of compounds in soil based on CSIA.

Applying no-depletion equilibrium sampling and full-depletion bioaccessibility extraction to 35 historically polycyclic aromatic hydrocarbon contaminated soils

Assessing the bioaccessibility of organic pollutants in contaminated soils is considered a complement to measurements of total concentrations in risk assessment and legislation. Consequently, methods for its quantification require validation with historically contaminated soils. In this study, 35 such soils were obtained from various locations in Switzerland and Cuba. They were exposed to different pollution sources (e.g., pyrogenic and petrogenic) at various distance (i.e., urban to rural) and were subject to different land use (e.g., urban gardening and forest). Passive equilibrium sampling with polyoxymethylene was used to determine freely dissolved concentrations (C_free) of polycyclic aromatic hydrocarbons (PAHs), while sorptive bioaccessibility extraction (SBE) with silicone rods was used to determine the bioaccessible PAH concentrations (C_bioacc) of these soils. The organic carbon partition coefficients of the soils were highest for skeet soils, followed by traffic, urban garden and rural soils. Lowest values were obtained from soil exposed to petrogenic sources. Applicability of SBE to quantify C_bioacc was restricted by silicone rod sorption capacity, as expressed quantitatively by the Sorption Capacity Ratio (SCR); particularly for soils with very high K_D. The source of contamination determined bioaccessible fractions (f_bioacc). The smallest f_bioacc were obtained with skeet soils (15%), followed by the pyrogenically influenced soils, rural soils, and finally, the petrogenically contaminated soil (71%). In conclusion, we present the potential and limitations of the SBE method to quantify bioaccessibility in real soils. These results can be used for additional development of this and similar bioaccessibility methods to guarantee sufficient sorption capacity to obtain reliable results.

Public health risk assessment with bioaccessibility considerations for soil PAHs at oil refinery vicinity areas in India

Populations living in the vicinity of oil refinery sludge deposition sites may be at greater risk of potential exposure to polycyclic aromatic hydrocarbons (PAHs) through inhalation, ingestion, and direct contact with contaminated media. Three Indian oil refinery sludge deposition sites (at Haldia, Barauni and Guwahati) were chosen for study. Soil samples were collected from three different locations at each site. Mild solvent extraction by butanol and exhaustive extraction by acetone/hexane have been conducted to estimate the bioaccessible PAHs beside the total extractable PAHs content of the soil samples. Concentrations of 13 PAHs in the soils were found to be in a range of 67.02-95.21μg/g and bioaccessible PAHs were in a range of 19.296-36.657μg/g. A probabilistic health risk assessment with bioaccessibility considerations was carried out using Monte Carlo simulations for the estimation of the cancer risk exposed to the PAHs. The 90th percentiles cancer risks with bioaccessibility considerations of soil PAHs for children is 6.506E-05 and for the adults the risk is 6.609E-05. Risk assessments on extracted PAHs from exhaustive solvent extraction can overestimate the risk by 2.87-2.89 folds at 90% confidence level with respect to the biomimetic mild extraction procedure using butanol. According to USEPA above 1×10^-6 extra risk of cancer is an alarm towards management. So, public health issues due to PAHs is imminent in these oil refinery vicinity areas. Sensitivity analysis revealed exposure duration (ED) and relative skin adherence factor for soil (AF) as the most influential parameters of the assessment. The profiling and risk assessment study with bioaccessibility considerations of PAHs from soil indicates that high PAHs concentration can lead to higher cancer risk for the vicinity area residents and local government should take immediate management actions.

Assessing bioavailability of complex chemical mixtures in contaminated soils: Progress made and research needs

Understanding the distribution, behaviour and interactions of complex chemical mixtures is key for providing the evidence necessary to make informed decisions and implement robust remediation strategies. Much of the current risk assessment frameworks applied to manage land contamination are based on total contaminant concentrations and the exposure assessments embedded within them do not explicitly address the partitioning and bioavailability of chemical mixtures. These oversights may contribute to an overestimation of both the eco-toxicological effects of the fractions and the mobility of contaminants. In turn, this may limit the efficacy of risk frameworks to inform targeted and proportionate remediation strategies. In this review we analyse the science surrounding bioavailability, its regulatory inclusion and the challenges of incorporating bioavailability in decision making process. While a number of physical and chemical techniques have proven to be valuable tools for estimating bioavailability of organic and inorganic contaminants in soils, doubts have been cast on its implementation into risk management soil frameworks mainly due to a general disagreement on the interchangeable use of bioavailability and bioaccessibility, and the associated methods which are still not standardised. This review focuses on the role of biotic and abiotic factors affecting bioavailability along with soil physicochemical properties and contaminant composition. We also included advantages and disadvantages of different extraction techniques and their implications for bioavailability quantitative estimation. In order to move forward the integration of bioavailability into site-specific risk assessments we should (1) account for soil and contaminant physicochemical characteristics and their effect on bioavailability; (2) evaluate receptor's potential exposure and uptake based on mild-extraction; (3) adopt a combined approach where chemical-techniques are used along with biological methods; (4) consider a simplified and cost-effective methodology to apply at regulatory and industry setting; (5) use single-contaminant exposure assessments to inform and predict complex chemical mixture behaviour and bioavailability.

Enhanced Accessibility of Polycyclic Aromatic Hydrocarbons (PAHs) and Heterocyclic PAHs in Industrially Contaminated Soil after Passive Dosing of a Competitive Sorbate

To assess the exposure to polycyclic aromatic hydrocarbons (PAHs) it is important to understand the binding mechanisms between specific soil constituents and the organic pollutant. In this study, sorptive bioaccessibility extraction (SBE) was applied to quantify the accessible PAH fraction in industrially contaminated soil with and without passive dosing of a competitive sorbate. SBE experiments revealed an accessible PAH fraction of 41 ± 1% (∑16 US EPA PAHs + 5 further PAHs). The passive dosing of toluene below its saturation level revealed competitive binding and resulted in an average increase of the accessible fraction to 49 ± 2%, whereby primarily the accessibility of higher molecular weight PAHs (log K_ow > 6) was affected. Competitive binding was verified using the same soil with only desorption-resistant PAHs present. In this experiment, passive dosing of toluene resulted in desorption of 13 ± 0.4% PAH. We explain increased PAH desorption after addition of toluene by competitive adsorption to high-affinity sorption sites while acknowledging that toluene could additionally have increased PAH mobility within the soil matrix. Findings suggest that the presence of copollutants at contaminated sites deserves specific considerations as these may increase accessibility and thereby exposure and mobility of PAHs.

Phytoavailability and mechanism of bound PAH residues in filed contaminated soils

Understanding the phytoavailability of bound residues of polycyclic aromatic hydrocarbons (PAHs) in soils is essential to assessing their environmental fate and risks. This study investigated the release and plant uptake of bound PAH residues (reference to parent compounds) in field contaminated soils after the removal of extractable PAH fractions. Plant pot experiments were performed in a greenhouse using ryegrass (Lolium multiflorum Lam.) to examine the phytoavailablility of bound PAH residues, and microcosm incubation experiments with and without the addition of artificial root exudates (AREs) or oxalic acid were conducted to examine the effect of root exudates on the release of bound PAH residues. PAH accumulation in the ryegrass after a 50-day growth period indicated that bound PAH residues were significantly phytoavailable. The extractable fractions, including the desorbing and non-desorbing fractions, dominated the total PAH concentrations in vegetated soils after 50 days, indicating the transfer of bound PAH residues to the extractable fractions. This transfer was facilitated by root exudates. The addition of AREs and oxalic acid to test soils enhanced the release of bound PAH residues into their extractable fractions, resulting in enhanced phytoavailability of bound PAH residues in soils. This study provided important information regarding environmental fate and risks of bound PAH residues in soils.

Two-liquid-phase system: A promising technique for predicting bioavailability of polycyclic aromatic hydrocarbons in long-term contaminated soils

A two-liquid-phase system (TLPS), which consisted of soil slurry and silicone oil, was employed to extract polycyclic aromatic hydrocarbons (PAHs) in four long-term contaminated soils in order to assess the bioavailability of PAHs. Extraction kinetics of six PAHs viz. phenanthrene, fluoranthene, pyrene, benzo(a)anthracene, benzo(a)pyrene, dibenzo(a,h)anthrancene were selected to investigate as they covered the susceptible and recalcitrant PAHs in soil. A parallel experiments were also carried out on the microbial degradation of these PAHs in soil with and without biostimulation (by adding (NH₄)₂HPO₄). The rapidly desorbed fraction of fluoranthene, as indicated by the two-fraction model, was found the highest, ranging from 21.4% to 37.4%, whereas dibenzo(a,h)anthrancene was the lowest, ranging from 8.9% to 20.5%. The rapid desorption of selected PAHs was found to be finished within 24 h. The rapidly desorbed fraction of PAHs investigated using TLPS, was significantly correlated (R² = 0.95) with that degraded by microorganisms in biostimulation treatment. This suggested that the TLPS-assisted extraction could be a promising technique in determining the bioavailability of aged PAHs in contaminated soils. It also suggested that applying sufficient nutrients in bioremediation of field contaminated soils is crucial. Further work is required to test its application to more hydrophobic organic pollutants in long-term contaminated soils.

Extraction techniques using isopropanol and Tenax to characterize polycyclic aromatic hydrocarbons bioavailability in sediment

Polycyclic aromatic hydrocarbon (PAH)-degrading bacterium strain J1-q (Sphingomonas pseudosanguinis strain J1-q) was isolated from Yangtze River surface sediment in the downtown area of Chongqing in a previous study. Isopropanol and Tenax extraction techniques were used to characterize the bioavailability of target PAH compounds. Phenanthrene (Phe) and fluoranthene (Fluo) were the target PAHs due to their significant background concentrations in surface sediment samples. Isopropanol solutions at concentrations of 50-100% and residual Phe and Fluo concentrations in sediment were correlated, with R² values of 0.9846 and 0.9649, respectively. The quantities of the Phe and Fluo fractions extracted for 3days with isopropanol from sediment were closely related with the corresponding quantities of PAHs degraded by bacterial strain J1-q when the extracting concentrations were 55% and 80%, respectively. The quantity of Phe extracted by Tenax agreed with the total quantity biodegraded when the Tenax: sediment mass ratio was 0.25 and the target PAHs were degraded for 30d, whereas the extracted quantity of Fluo accounted for 93.30% of the total quantity biodegraded by the bacterium. The triphasic model was appropriate to simulate the consecutive Phe and Fluo extraction process using Tenax at various Tenax: sediment ratios, and all simulated correlation coefficients were >0.9151. A 24-h extraction period was adequate to estimate the rapidly desorbing fractions when they were extracted with Tenax. Isopropanol extraction was preferable to characterize Phe and Fluo bioavailability under the experimental conditions, whereas Tenax extraction was useful to predict bioavailability of the two target PAHs with particular selectivity.

Residual hydrophobic organic contaminants in soil: Are they a barrier to risk-based approaches for managing contaminated land?

Risk-based approaches to managing contaminated land, rather than approaches based on complete contaminant removal, have gained acceptance as they are likely to be more feasible and cost effective. Risk-based approaches aim to minimise risks of exposure of a specified contaminant to humans. However, adopting a risk-based approach over alternative overly-conservative approaches requires that associated uncertainties in decision making are understood and minimised. Irrespective of the nature of contaminants, a critical uncertainty is whether there are potential risks associated with exposure to the residual contaminant fractions in soil to humans and other ecological receptors, and how they should be considered in the risk assessment process. This review focusing on hydrophobic organic contaminants (HOCs), especially polycyclic aromatic hydrocarbons (PAHs), suggests that there is significant uncertainty on the residual fractions of contaminants from risk perspectives. This is because very few studies have focused on understanding the desorption behaviour of HOCs, with few or no studies considering the influence of exposure-specific factors. In particular, it is not clear whether the exposure of soil-associated HOCs to gastrointestinal fluids and enzyme processes release bound residues. Although, in vitro models have been used to predict PAH bioaccessibility, and chemical extractions have been used to determine residual fractions in various soils, there are still doubts about what is actually being measured. Therefore it is not certain which bioaccessibility method currently represents the best choice, or provides the best estimate, of in vivo PAH bioavailability. It is suggested that the fate and behaviour of HOCs in a wide range of soils, and that consider exposure-specific scenarios, be investigated. Exposure-specific scenarios are important for validation purposes, which may be useful for the development of standardised methods and procedures for HOC bioaccessibility determinations. Research is needed to propose the most appropriate testing methods and for assessing potential risks posed by residual fractions of HOCs. Such investigations may be useful for minimising uncertainties associated with a risk-based approach, so that consideration may then be given to its adoption on a global scale. This review critically appraises existing information on the bioavailability of HOC residues in soil to establish whether there may be risks from highly sequestered contaminant residues.

The Interaction between Plants and Bacteria in the Remediation of Petroleum Hydrocarbons: An Environmental Perspective

Widespread pollution of terrestrial ecosystems with petroleum hydrocarbons (PHCs) has generated a need for remediation and, given that many PHCs are biodegradable, bio- and phyto-remediation are often viable approaches for active and passive remediation. This review focuses on phytoremediation with particular interest on the interactions between and use of plant-associated bacteria to restore PHC polluted sites. Plant-associated bacteria include endophytic, phyllospheric, and rhizospheric bacteria, and cooperation between these bacteria and their host plants allows for greater plant survivability and treatment outcomes in contaminated sites. Bacterially driven PHC bioremediation is attributed to the presence of diverse suites of metabolic genes for aliphatic and aromatic hydrocarbons, along with a broader suite of physiological properties including biosurfactant production, biofilm formation, chemotaxis to hydrocarbons, and flexibility in cell-surface hydrophobicity. In soils impacted by PHC contamination, microbial bioremediation generally relies on the addition of high-energy electron acceptors (e.g., oxygen) and fertilization to supply limiting nutrients (e.g., nitrogen, phosphorous, potassium) in the face of excess PHC carbon. As an alternative, the addition of plants can greatly improve bioremediation rates and outcomes as plants provide microbial habitats, improve soil porosity (thereby increasing mass transfer of substrates and electron acceptors), and exchange limiting nutrients with their microbial counterparts. In return, plant-associated microorganisms improve plant growth by reducing soil toxicity through contaminant removal, producing plant growth promoting metabolites, liberating sequestered plant nutrients from soil, fixing nitrogen, and more generally establishing the foundations of soil nutrient cycling. In a practical and applied sense, the collective action of plants and their associated microorganisms is advantageous for remediation of PHC contaminated soil in terms of overall cost and success rates for in situ implementation in a diversity of environments. Mechanistically, there remain biological unknowns that present challenges for applying bio- and phyto-remediation technologies without having a deep prior understanding of individual target sites. In this review, evidence from traditional and modern omics technologies is discussed to provide a framework for plant-microbe interactions during PHC remediation. The potential for integrating multiple molecular and computational techniques to evaluate linkages between microbial communities, plant communities and ecosystem processes is explored with an eye on improving phytoremediation of PHC contaminated sites.

A novel bioaccessibility prediction method for PAHs in soil: Composite extraction with hydroxypropyl-β-cyclodextrin and extracellular polymer substances

Hydroxypropyl-β-cyclodextrin (HPCD) extraction has been widely used to estimate bioaccessibility of polycyclic aromatic hydrocarbons (PAHs) in soil, but it often underestimates the actual risk due to lack of information regarding the exogenous active substances, such as extracellular polymer substance (EPS) secreted by microorganisms. In this study, a novel technique, composite extraction of HPCD each with rhamnolipid (RL), bovine serum albumin (BSA) and alginate sodium (AS), models of lipopolysaccharide, proteins and polysaccharides, was developed to assess PAHs bioaccessibility to earthworms. In addition, comparisons were conducted with accelerated solvent extraction (ASE) and individual HPCD extraction. The results demonstrated that all chemical extractions were linearly correlated with earthworm accumulation, and individual HPCD extraction underestimated PAH bioaccessibility by about two times. However, the overall performances of the three composite chemical extractions (HPCD/AS, HPCD/RL, HPCD/BSA) were better than individual HPCD extraction, among which, HPCD/AS was best at estimating the earthworm accumulation (considering both correlation coefficient and fitted linear slope). Therefore, all observations implied that HPCD/AS extraction could be used as a fast and reliable method to predict PAH bioaccessibility to earthworms in contaminated soils.

Alternative techniques to HPCD to evaluate the bioaccessible fraction of soil-associated PAHs and correlation to biodegradation efficiency

The total amount of polycyclic aromatic hydrocarbons (PAHs) in soils, given by exhaustive chemical extractions, does not relate directly to environmental risk, since only a fraction may be accessible to soil organisms. The rapid PAH desorbing fraction (Frap), which is weakly and reversibly sorbed to soils, is called the bioaccessible fraction, and can be estimated by non-exhaustive aqueous extractions. In order to better estimate Frap, different mild-extractants were tested, such as various cyclodextrins, surfactants and butanol. Their extractability performances were correlated to the Kd partition coefficients of seven PAHs obtained through sorption isotherms from five soils, but also to the PAHs molecular size and to the amounts of organic matter and of some clays (smectites and kaolinites). If hydroxypropyl-β-cyclodextrin was actually a good extractant to assess PAH accessibility, the polymer of carboxymethyl-β-cyclodextrin (pCMCD) was better (with a lower cost) to estimate the rapid mass transfer between soil particles and the soil solution, depending also on soil ageing. But Frap, estimated through pCMCD extractions, did not reflect the biodegradation of the PAHs after three months in soil microcosms. The chemical method underestimated the dissipation of 3-4 ring PAHs and overestimated that of 5-6 ring PAHs. So biodegradation was not only limited by PAHs mass-transfer, but also by biological factors, favoring the access of microorganisms to residual strongly sorbed fractions of 3-4 ring PAHs, and inhibiting the degradation of accessible but highly toxic 5-6 ring PAHs.

Influences of artificial root exudate components on the behaviors of BDE-28 and BDE-47 in soils: desorption, availability, and biodegradation

Behaviors of BDE-28 and BDE-47 in two distinct soils (Phaeozem and Acrisol) as affected by the separate addition of root exudate components (i.e., oxalic acid, glycine, and fructose) were investigated by a soil microcosm incubation experiment. The results showed that root exudate components promoted the desorption of BDE-28 (57.6-235.0 %) and BDE-47 (56.9-223.7 %) from the soils due to the enhancement of their water solubilities. The addition of root exudate components increased the n-butanol extractability of BDE-28 and BDE-47 by 20.3-72.5 and 48.6-169.2 %, respectively, which had a positive correlation with the concentrations of dissolved organic carbon (DOC) in the soils (p < 0.01), suggesting that the increase of DOC in the soils by root exudate components was the major factor to enhance the extractability. Fructose and oxalic acid promoted the desorption and increased the availability of BDE-28 and BDE-47 in the soils more efficiently than glycine. The addition of different root exudate components resulted in distinct shifts in soil microbial community structure (p < 0.05). Oxalic acid caused the greatest impacts on the soil bacterial communities and increased the degradation rates of BDE-28 and BDE-47 most obviously. The findings of this study clarified the roles of root exudate components in affecting the behaviors of polybrominated diphenyl ethers (PBDEs) in soils.

Effects of root exudates on the leachability, distribution, and bioavailability of phenanthrene and pyrene from mangrove sediments

In this study, column leaching experiments were used to evaluate the leachability, distribution and bioavailability of phenanthrene and pyrene by root exudates from contaminated mangrove sediments. We observed that root exudates significantly promoted the release and enhanced the bioavailability of phenanthrene and pyrene from sediment columns. The concentration of phenanthrene and pyrene and cumulative content released from the analyzed sediment samples following root exudate rinsing decreased in the following order: citric acid > oxalic acid > malic acid. After elution, the total concentrations of phenanthrene and pyrene in sediment layers followed a descending order of bottom (9-12 cm) > middle (5-7 cm) > top (0-3 cm). Furthermore, a positive correlation between leachate pH values and PAH concentrations of the leachate was found. Consequently, the addition of root exudates can increase the leachability and bioavailability of phenanthrene and pyrene.

Effect of low-molecular-weight organic acids on photo-degradation of phenanthrene catalyzed by Fe(III)-smectite under visible light

The photolysis of polycyclic aromatic hydrocarbons (PAHs) is potentially an important process for its transformation and fate on contaminated soil surfaces. In this study, phenanthrene is employed as a model to explore PAH photodegradation with the assistance of Fe(III)-smectite under visible-light while focusing on roles played by five low-molecular-weight organic acids (LMWOAs), i.e., malic acid, oxalic acid, citric acid, ethylenediaminetetraacetic acid (EDTA), and nitrilotriacetic acid. Our results show that oxalic acid is most effective in promoting the photodegradation of phenanthrene, while only a slight increase in the rate of phenanthrene photodegradation is observed in the presence of malic acid. Electron paramagnetic resonance experiments confirm the formation of CO2(-) radicals in the presence of malic and oxalic acid, which provides strong evidence for generating OH and subsequent photoreaction pathways. The presence of EDTA or nitrilotriacetic acid significantly inhibits both Fe(II) formation and phenanthrene photodegradation because these organic anions tend to chelate with Fe(III), leading to decreases in the electron-accepting potential of Fe(III)-smectite and a weakened interaction between phenanthrene and Fe(III)-smectite. These observations provide valuable insights into the transformation and fate of PAHs in the natural soil environment and demonstrate the potential for using some LMWOAs as additives for the remediation of contaminated soil.

Identification of Scirpus triqueter root exudates and the effects of organic acids on desorption and bioavailability of pyrene and lead in co-contaminated wetland soils

Root exudates (REs) of Scirpus triqueter were extracted from the rhizosphere soil in this study. The components in the REs were identified by GC-MS. Many organic acids, such as hexadecanoic acid, pentadecanoic acid, vanillic acid, octadecanoic acid, citric acid, succinic acid, glutaric acid, and so on, were found. Batch simulated experiments were conducted to evaluate the impacts of different organic acids, such as citric acid, artificial root exudates (ARE), succinic acid, and glutaric acid in REs of S. triqueter on desorption of pyrene (PYR) and lead (Pb) in co-contaminated wetland soils. The desorption amount of PYR and Pb increased with the rise in concentrations of organic acids in the range of 0-50 g·L(-1), within shaking time of 2-24 h. The desorption effects of PYR and Pb in soils with various organic acids treatments decreased in the following order: citric acid > ARE > succinic acid > glutaric acid. The desorption rate of PYR and Pb was higher in co-contaminated soil than in single pollution soil. The impacts of organic acids in REs of S. triqueter on bioavailability of PYR and Pb suggested that organic acids enhanced the bioavailability of PYR and Pb in wetland soil, and the bioavailability effects of organic acids generally followed the same order as that of desorption effects.

Effect of ageing on benzo[a]pyrene extractability in contrasting soils

Changes in benzo[a]pyrene (B[a]P) extractability over 160 days ageing in four contrasting soils varying in organic matter content and clay mineralogy were investigated using dichloromethane: acetone 1:1 (DCM/Ace), 60 mM hydroxypropyl-β-cyclodextrin (HPCD) solution, 1-butanol (BuOH) and Milli-Q water. The B[a]P extractability by the four methods decreased with ageing and a first-order exponential model could be used to describe the kinetics of release. Correlation of the kinetic rate constant with major soil properties showed a significant effect of clay and sand contents and pore volume fraction (<6 nm) on sequestration of the desorbable fraction (by HPCD) and the water-extractable fraction. Analysis of (14)C-B[a]P in soils after ageing showed a limited loss of B[a]P via degradation. Fractionation of B[a]P pools associated with the soil matrix was analysed according to extractability of B[a]P by the different extraction methods. A summary of the different fractions is proposed for the illustration of the effect of ageing on different B[a]P-bound fractions in soils. This study provides a better understanding of the B[a]P ageing process associated with different fractions and also emphasises the extraction capacity of the different methods employed.

Remedial effects of Potamogeton crispus L. on PAH-contaminated sediments

In this study, the remedial effects of submerged macrophyte Potamogeton crispus L. on polycyclic aromatic hydrocarbon (PAH)-contaminated sediments were investigated. After a 54-day experiment, the dissipation ratios of phenanthrene and pyrene were 84.8-88.3 and 72.4-78.5% in rhizosphere sediments, which were significantly higher than those in non-rhizosphere sediments (54.2-66.6 and 54.7-58.5%). The dissipation increment increased not only with increasing spiked concentration, but also over time, while plant uptake accounted for only a small portion (<6%) of the dissipation increment. Moreover, bioavailable fraction tests revealed that biodegradation was not controlled by the amount of bioavailable PAHs. For better understanding of the microbial mechanism involved, phospholipid fatty acid (PLFA) profiles were analyzed. Biomass of microorganisms indicated by the total PLFA content was higher in rhizosphere sediments than in non-rhizosphere sediments and was related well to the dissipation ratios of the two PAHs. Cluster analysis showed that community structure significantly changed in rhizosphere sediments. Moreover, the increments of PAH dissipation in rhizosphere sediments had a strong positive correlation with those of polyphenol oxidase activities in the same media. It can be concluded that the enhanced remediation of PAHs by P. crispus was mainly due to the increase of microbial biomass and activity as well as changes of microbial community structure in sediments as a result of plant growth stimulation.

Effect of pre-heating on the chemical oxidation efficiency: implications for the PAH availability measurement in contaminated soils

Three chemical oxidation treatments (KMnO4, H2O2 and Fenton-like) were applied on three PAH-contaminated soils presenting different properties to determine the potential use of these treatments to evaluate the available PAH fraction. In order to increase the available fraction, a pre-heating (100 °C under N2 for one week) was also applied on the samples prior oxidant addition. PAH and extractable organic matter contents were determined before and after treatment applications. KMnO4 was efficient to degrade PAHs in all the soil samples and the pre-heating slightly improved its efficiency. H2O2 and Fenton-like treatments presented low efficiency to degrade PAH in the soil presenting poor PAH availability, however, the PAH degradation rates were improved with the pre-heating. Consequently H2O2-based treatments (including Fenton-like) are highly sensitive to contaminant availability and seem to be valid methods to estimate the available PAH fraction in contaminated soils.

New biomimetic approach to determine the bioavailability of triclosan in soils and its validation with the wheat plant uptake bioassay

A new biomimetic approach for triclosan (TCS) was developed based on the leaching of the analyte from different biosolid-amended agricultural soils and the subsequent extraction of the leachates, using a rotating disk sorptive extraction (RDSE) procedure. The leaching equilibrium for TCS was reached at 3h when the ISO method (ISO/TS 21268-1:2007) was followed. The concentrations determined by this biomimetic method were compared with the bioavailability of TCS, determined by its accumulation in the roots of wheat plants grown in the same soil-biosolid systems. It was observed that the amount of organic matter in the soil matrix was a determining factor for mobilization of TCS. An increasing biosolid rate applied to soils resulted in a reduced mobility of TCS because the high amount of organic matter provided by the biosolid increased the hydrophobic interaction between TCS and the matrix. Similarly, increasing biosolid concentrations in the soil significantly decreased the bioavailability of TCS to the wheat plant. Thus, the bioavailability factor in wheat roots decreased from 0.22 to 0.08 for a soil having a pH of 8.2, when the biosolid rate was increased from 30 to 200 Mg ha(-1), respectively. A significant correlation (R=0.98) was obtained between TCS concentration in wheat plants and the proposed biomimetic methodology, indicating that the latter can predict the bioavailability in a time period as short as 180 min. The results of this study confirm our previous findings that amending soils with biosolids is beneficial for immobilizing low polarity contaminants and helps prevent their percolation through the soil profile and into groundwater.

Using chemical desorption of PAHs from sediment to model biodegradation during bioavailability assessment

This work compares the biodegradation potential of four polycyclic aromatic hydrocarbons (PAH) (phenanthrene, pyrene, chrysene and benzo(a)pyrene, chosen as representatives of the 3, 4 and 5 ring PAHs) with their desorption from sediment by XAD4 resin and methyl-β-cyclodextrin (MCD). The biodegradation study was conducted under various conditions (biostimulation, bioaugmentation and their combination). The results show that total PAH removal in all treatments except biostimulation gave similar results, whereby the total amount of PAHs was decreased by about 30-35%. The desorption experiment showed that XAD4 desorbed a greater fraction of phenanthrene (77% versus 52%), and benzo(a)pyrene (44% versus 25%) than MCD. The results for four ring PAHs were similar for both desorption agents (about 30%). Comparing the maximum biodegraded amount of each PAH with the rapidly desorbed XAD4 and MCD fraction, XAD4 was found to correlate better with biodegradation for the high molecular PAHs (pyrene, chrysene, benzo(a)pyrene), although it overestimated the availability of phenanthrene. In contrast, MCD showed better correlation with the biodegradation of low molecular weight PAHs.

Effects of ageing and soil properties on the oral bioavailability of benzo[a]pyrene using a swine model

Oral bioavailability of benzo[a]pyrene (B[a]P) was studied in a swine model using eight spiked soil samples after incubation for 50 and/or 90 days. Silica sand was used as a reference material and the relative bioavailability (RB) of B[a]P in soils was calculated as the quotient of the area under the plasma B[a]P curve (AUC) for soil and AUC for the silica sand. Significantly reduced RB was observed in all study soils after 90 days ageing, ranging from 22.1±0.4% to 62.7±10.1%, except for one very sandy soil (sand content 87.6%) where RB was unchanged (108.1±8.0%). Apart from this, bioavailability decreased during ageing with the decrease (from day 50 to day 90) being only significant for a clayey soil containing expandable clay minerals. Statistical analyses of B[a]P RB at day 90 (eight soils) and soil properties showed no direct correlation between RB and specific soil properties such as total organic carbon (TOC) and clay content which were commonly linked to organic contaminant sequestration. However, strongly significant relationships (p<0.001) were found between RB and the fine particle associated carbon (FPAC) defined as (Silt+Clay)/TOC, and between RB and the soil mesopore (<6nm; p<0.001) fraction, after two samples with high pH and high EC being excluded from the analyses. The bioaccessibility estimated by four in vitro extraction methods: dichloromethane/acetone sonication (DCM/Ace), butanol vortex (BuOH), hydroxypropyl-β-cyclodextrin extraction (HPCD) and Milli Q water leaching methods at different sampling time (1 day, 50 days and 90 days after spiking) also showed a decreasing trend. Significant correlations were found between B[a]P RB and DCM/Ace (R(2)=0.67, p<0.05) extractable fraction and BuOH (R(2)=0.75, p<0.01) extractable fraction.

Bioavailability of (Geno)toxic Contaminants in Polycyclic Aromatic Hydrocarbon-Contaminated Soil Before and After Biological Treatment

Contaminated soil from a former manufactured-gas plant site was treated in a laboratory-scale bioreactor. Desorbability and biodegradability of 14 polycyclic aromatic hydrocarbons (PAHs) and 4 oxygenated PAHs (oxy-PAHs) were investigated throughout a treatment cycle. Desorbability was determined using a mixed-function sorbent (Oasis^® HLB) or a hydrophobic sorbent (Tenax^®) in dialysis tubing suspended in the soil slurry. Toxicity and genotoxicity of the whole soil and the desorbable fractions were determined by DNA damage response analysis with the chicken DT40 B-lymphocyte isogenic cell line and its DNA repair-deficient mutant Rad54^-/-. Biological treatment significantly removed both PAHs and oxy-PAHs, and their desorbability decreased throughout the bioreactor treatment cycle. Collectively, oxy-PAHs were more desorbable and biodegradable than the corresponding PAHs; for example, the oxy-PAH present at the highest concentration, 9,10-anthraquinone, was more desorbable and biodegradable than anthracene. For both PAHs and oxy-PAHs, the percentage removed in the bioreactor significantly exceeded the percentage desorbed from untreated soil, indicating that desorption did not control the extent of biodegradation. Consistent with previous results on the same soil, genotoxicity of the whole soil slightly increased after biological treatment. However, both toxicity and genotoxicity of the desorbable constituents in the soil decreased after treatment, suggesting that any genotoxic constituents that may have formed during treatment were primarily associated with less accessible domains in the soil.

Correlations between PAH bioavailability, degrading bacteria, and soil characteristics during PAH biodegradation in five diffusely contaminated dissimilar soils

The natural biodegradation of seven polycyclic aromatic hydrocarbons (PAHs) by native microorganisms was studied in five soils from Normandy (France) from diffusely polluted areas, which can also pose a problem in terms of surfaces and amounts of contaminated soils. Bioavailability tests using cyclodextrin-based extractions were performed. The natural degradation of low molecular weight (LMW) PAHs was not strongly correlated to their bioavailability due to their sorption to geosorbents. Conversely, the very low degradation of high molecular weight (HMW) PAHs was partly correlated to their poor availability, due to their sorption on complexes of organic matter and kaolinites or smectites. A principal component analysis allowed us to distinguish between the respective degradation behaviors of LMW and HMW PAHs. LMW PAHs were degraded in less than 2-3 months and were strongly influenced by the relative percentage of phenanthrene-degrading bacteria over total bacteria in soils. HMW PAHs were not significantly degraded, not only because they were less bioavailable but also because of a lack of degrading microorganisms. Benzo[a]pyrene stood apart since it was partly degraded in acidic soils, probably because of a catabolic cooperation between bacteria and fungi.

The prediction of PAHs bioavailability in soils using chemical methods: state of the art and future challenges

The evaluation of the available fraction of hydrophobic organic contaminants (HOCs) is extremely important for assessing their risk to the environment and human health. This available fraction, which can be solubilized and/or easily extracted, is believed to be the most accessible for bioaccumulation, biosorption and/or transformation by organisms. Based on this, two main types of chemical methods have been developed, closely related to the concepts of bioaccessibility and freely available concentrations: non-exhaustive extractions and biomimetic methods. Since bioavailability is species and compound specific, this work focused only in one of the most widespread group of HOCs in soils: polycyclic aromatic hydrocarbons (PAHs). This study aims at producing a state of the art knowledge base on bioavailability and chemical availability of PAHs in soils, clarifying which chemical methods can provide a better prediction of an organism exposure, and which are the most promising ones. Therefore, a review of the processes involved on PAHs availability to microorganisms, earthworms and plants was performed and the outputs given by the different chemical methods were evaluated. The suitability of chemical methods to predict bioavailability of the 16 US EPA PAHs in dissimilar naturally contaminated soils was not yet demonstrated, being especially difficult for high molecular weight compounds. Even though the potential to predict microbial mineralization using non-exhaustive extractions is promising, it will be very difficult to achieve for earthworms and plants, due to the complexity of accumulation mechanisms which are not taken into account by chemical methods. Yet, the existing models could be improved by determining compound, species and site specific parameters. Moreover, chemical availability can be very useful to understand the bioavailability processes and the behavior of PAHs in soils. The inclusion of chemical methods on risk assessment has been suggested and it is promising, despite some methods overpredict risks.

Chemical and bioanalytical characterisation of PAHs in risk assessment of remediated PAH-contaminated soils

Polycyclic aromatic hydrocarbons (PAHs) are common contaminants in soil at former industrial areas; and in Sweden, some of the most contaminated sites are being remediated. Generic guideline values for soil use after so-called successful remediation actions of PAH-contaminated soil are based on the 16 EPA priority pollutants, which only constitute a small part of the complex cocktail of toxicants in many contaminated soils. The aim of the study was to elucidate if the actual toxicological risks of soil samples from successful remediation projects could be reflected by chemical determination of these PAHs. We compared chemical analysis (GC-MS) and bioassay analysis (H4IIE-luc) of a number of remediated PAH-contaminated soils. The H4IIE-luc bioassay is an aryl hydrocarbon (Ah) receptor-based assay that detects compounds that activate the Ah receptor, one important mechanism for PAH toxicity. Comparison of the results showed that the bioassay-determined toxicity in the remediated soil samples could only be explained to a minor extent by the concentrations of the 16 priority PAHs. The current risk assessment method for PAH-contaminated soil in use in Sweden along with other countries, based on chemical analysis of selected PAHs, is missing toxicologically relevant PAHs and other similar substances. It is therefore reasonable to include bioassays in risk assessment and in the classification of remediated PAH-contaminated soils. This could minimise environmental and human health risks and enable greater safety in subsequent reuse of remediated soils.

Chemical measures of bioavailability/bioaccessibility of PAHs in soil: fundamentals to application

Risk assessment and remediation of contaminated land is inherently dependent on the contaminants present and their availability for interaction with soil biota. An ever-growing body of evidence suggests that current regulatory procedures over-estimate the 'true' fraction available to biota. Thus, a procedure that predicts the 'bioavailable fraction' would be useful for predicting 'actual' exposure limits and provide a more relevant basis for risk assessment. The aim of this paper is to address several important questions: "How should bioavailability be defined?" "What factors affect bioavailability measurement?" "To what extent have existing protocols measured bioavailability?" "What is actually measured by chemical techniques purported to determine bioavailability?" We offer two definitions (namely 'bioavailability' and 'bioaccessibility') and review commonly employed chemical extraction techniques to measure putative bioavailability. Relative advantages and disadvantages of the techniques are highlighted to elucidate underlying factors for the wide range of conclusions observed in the literature. Although the concept of bioavailability is implicit to contaminated land risk assessment and remediation, explicit reference to and use of adjustment factors is rare amongst regulatory bodies and remediators. Use of chemical determinants for bioavailability, applicable within current legislation and due consideration to inherent variability, are proposed and barriers to their implementation discussed.

Methods to assess bioavailability of hydrophobic organic contaminants: Principles, operations, and limitations

Many important environmental contaminants are hydrophobic organic contaminants (HOCs), which include PCBs, PAHs, PBDEs, DDT and other chlorinated insecticides, among others. Owing to their strong hydrophobicity, HOCs have their final destination in soil or sediment, where their ecotoxicological effects are closely regulated by sorption and thus bioavailability. The last two decades have seen a dramatic increase in research efforts in developing and applying partitioning based methods and biomimetic extractions for measuring HOC bioavailability. However, the many variations of both analytical methods and associated measurement endpoints are often a source of confusion for users. In this review, we distinguish the most commonly used analytical approaches based on their measurement objectives, and illustrate their practical operational steps, strengths and limitations using simple flowcharts. This review may serve as guidance for new users on the selection and use of established methods, and a reference for experienced investigators to identify potential topics for further research.

Sorptive bioaccessibility extraction (SBE) of soils: combining a mobilization medium with an absorption sink

In principle, soil bioaccessibility extraction methods are simple dissolution experiments, where the fraction of compounds that is transferred to the extraction medium is measured and considered to be bioaccessible. For hydrophobic organic chemicals (HOCs) such techniques can lead to underestimation of bioaccessibility when the capacity of the extraction medium is insufficient to provide infinite sink conditions for the target compounds. A sorptive bioaccessibility extraction (SBE) method was thus developed and validated, which integrates the key processes of desorption from the matrix and subsequent consumption or depletion. Cyclodextrin was used as a diffusive carrier to enhance desorption from the matrix, while a silicone rod was used as a dominating sink that continuously absorbed the HOC molecules from the cyclodextrin solution. The silicone rod was then solvent extracted and the HOCs measured by GC-MS. For wood soot, the SBE method yielded PAH bioaccessibility estimates that were 3-24 times higher compared to a cyclodextrin extraction without a sink. The study demonstrated that the inclusion of an absorption sink into an established bioaccessibility extraction method (1) is rather simple, (2) can have a major impact on the obtained results, especially for the more hydrophobic compounds and (3) can simplify the analytics.

Variability of standard artificial soils: Physico-chemical properties and phenanthrene desorption measured by means of supercritical fluid extraction

The study is focused on artificial soil which is supposed to be a standardized "soil like" medium. We compared physico-chemical properties and extractability of Phenanthrene from 25 artificial soils prepared according to OECD standardized procedures at different laboratories. A substantial range of soil properties was found, also for parameters which should be standardized because they have an important influence on the bioavailability of pollutants (e.g. total organic carbon ranged from 1.4 to 6.1%). The extractability of Phe was measured by supercritical fluid extraction (SFE) at harsh and mild conditions. Highly variable Phe extractability from different soils (3-89%) was observed. The extractability was strongly related (R(2)=0.87) to total organic carbon content, 0.1-2mm particle size, and humic/fulvic acid ratio in the following multiple regression model: SFE (%)=1.35*sand (%)-0.77*TOC (%)2+0.27*HA/FA.

Evaluation of dissipation gradients of polycyclic aromatic hydrocarbons in rice rhizosphere utilizing a sequential extraction procedure

The aim of this study was to evaluate the spatial dissipation gradient of PAHs, including phenanthrene, pyrene, and benzo[a]pyrene, with various bioavailability represented with sequential extraction. Dissipation rates of PAHs in the rhizosphere were greater than those in the bulk soil. The n-butanol extracted fraction showed a general trend of dissipation during phytoremediation. Moreover, the formation of bound PAH residues was inhibited in the rhizosphere. While concerning the PAH toxicity, the reduction rates of PAH toxicity were significantly greater than total soil PAH concentrations. Microbial biomass was the highest at four mm away from the root surface. However, the PAH dissipation rates were the highest at one mm and two mm away from the root surface in high and low PAH treatments, respectively. These results suggest that rhizoremediation with rice is a useful approach to reduce the toxicity of PAHs in soil.

Passive samplers provide a better prediction of PAH bioaccumulation in earthworms and plant roots than exhaustive, mild solvent, and cyclodextrin extractions

A number of extraction methods have been developed to assess polycyclic aromatic hydrocarbon (PAH) bioavailability in soils. As these methods are rarely tested in a comparative manner, against different test organisms, and using field-contaminated soils, it is unclear which method gives the most accurate measure of the actual soil ecosystem exposure. In this study, PAH bioavailability was assessed in ten field-contaminated soils by using exhaustive acetone/hexane extractions, mild solvent (butanol) extractions, cyclodextrin extractions, and two passive sampling methods; solid phase micro extraction (SPME) and polyoxymethylene solid phase extraction (POM-SPE). Results were compared to actual PAH bioaccumulation in earthworms (Eisenia fetida) and rye grass (Lolium multiflorum) roots. Exhaustive, mild solvent and cyclodextrin extractions consistently overpredicted biotic concentrations by a factor of 10-10 000 and therefore seem inappropriate for predicting PAH bioaccumulation in field contaminated soils. In contrast, passive samplers generally predicted PAH concentrations in earthworms within a factor of 10, although correlations between predicted and measured concentrations were considerably scattered. The same applied to the plant data, where passive samplers also tended to underpredict root concentrations. These results indicate the potential of passive samplers to predict PAH bioaccumulation, yet call for comparative studies between passive samplers and further research on plant bioavailability.

Assessment of phenanthrene bioavailability in aged and unaged soils by mild extraction

It has become apparent that the threat of an organic pollutant in soil is directly related to its bioavailable fraction and that the use of total contaminant concentrations as a measure of potential contaminant exposure to plants or soil organisms is inappropriate. In light of this, non-exhaustive extraction techniques are being investigated to assess their appropriateness in determining bioavailability. To find a suitable and rapid extraction method to predict phenanthrene bioavailability, multiple extraction techniques (i.e., mild hydroxypropyl-β-cyclodextrin (HPCD) and organic solvents extraction) were investigated in soil spiked to a range of phenanthrene levels (i.e., 1.12, 8.52, 73, 136, and 335 μg g( - 1) dry soil). The bioaccumulation of phenanthrene in earthworm (Eisenia fetida) was used as the reference system for bioavailability. Correlation results for phenanthrene suggested that mild HPCD extraction was a better method to predict bioavailability of phenanthrene in soil compared with organic solvents extraction. Aged (i.e., 150 days) and fresh (i.e., 0 day) soil samples were used to evaluate the extraction efficiency and the effect of soil contact time on the availability of phenanthrene. The percentage of phenanthrene accumulated by earthworms and percent recoveries by mild extractants changed significantly with aging time. Thus, aging significantly reduced the earthworm uptake and chemical extractability of phenanthrene. In general, among organic extractants, methanol showed recoveries comparable to those of mild HPCD for both aged and unaged soil matrices. Hence, this extractant can be suitable after HPCD to evaluate risk of contaminated soils.

Desorption and bioavailability of polycyclic aromatic hydrocarbons in contaminated soil subjected to long-term in situ biostimulation

The distribution and potential bioavailability of polycyclic aromatic hydrocarbons (PAHs) in soil from a former manufactured-gas plant (MGP) site were examined before and after long-term biostimulation under simulated in situ conditions. Treated soil was collected from the oxygenated zones of two continuous-flow columns, one subjected to biostimulation and the other serving as a control, and separated into low- and high-density fractions. In the original soil, over 50% of the total PAH mass was associated with lower density particles, which made up <2% of the total soil mass. However, desorbable fractions of PAHs were much lower in the low-density material than in the high-density material. After more than 500 d of biostimulation, significant removal of total PAHs occurred in both the high- and low-density materials (77 and 53%, respectively), with three- and four-ring PAHs accounting for the majority of the observed mass loss. Total PAHs that desorbed over a 28-d period were substantially lower in treated soil from the biostimulated column than in the original soil for both the high-density material (23 vs. 63%) and the low-density material (5 vs. 20%). The fast-desorbing fractions quantified by a two-site desorption model ranged from 0.1 to 0.5 for most PAHs in the original soil but were essentially zero in the biostimulated soil. The fast-desorbing fractions in the original soil underestimated the extent of PAH biodegradation observed in the biostimulated column and thus was not a good predictor of PAH bioavailability after long-term, simulated in situ biostimulation.

Using deuterated PAH amendments to validate chemical extraction methods to predict PAH bioavailability in soils

Validating chemical methods to predict bioavailable fractions of polycyclic aromatic hydrocarbons (PAHs) by comparison with accumulation bioassays is problematic. Concentrations accumulated in soil organisms not only depend on the bioavailable fraction but also on contaminant properties. A historically contaminated soil was freshly spiked with deuterated PAHs (dPAHs). dPAHs have a similar fate to their respective undeuterated analogues, so chemical methods that give good indications of bioavailability should extract the fresh more readily available dPAHs and historic more recalcitrant PAHs in similar proportions to those in which they are accumulated in the tissues of test organisms. Cyclodextrin and butanol extractions predicted the bioavailable fraction for earthworms (Eisenia fetida) and plants (Lolium multiflorum) better than the exhaustive extraction. The PAHs accumulated by earthworms had a larger dPAH:PAH ratio than that predicted by chemical methods. The isotope ratio method described here provides an effective way of evaluating other chemical methods to predict bioavailability.