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Greenhalgh T, MacIntyre CR, Baker MG, Bhattacharjee S, Chughtai AA, Fisman D, Kunasekaran M, Kvalsvig A, Lupton D, Oliver M, Tawfiq E, Ungrin M, Vipond J. Masks and respirators for prevention of respiratory infections: a state of the science review. Clin Microbiol Rev 2024; 37:e0012423. [PMID: 38775460 DOI: 10.1128/cmr.00124-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2024] Open
Abstract
SUMMARYThis narrative review and meta-analysis summarizes a broad evidence base on the benefits-and also the practicalities, disbenefits, harms and personal, sociocultural and environmental impacts-of masks and masking. Our synthesis of evidence from over 100 published reviews and selected primary studies, including re-analyzing contested meta-analyses of key clinical trials, produced seven key findings. First, there is strong and consistent evidence for airborne transmission of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and other respiratory pathogens. Second, masks are, if correctly and consistently worn, effective in reducing transmission of respiratory diseases and show a dose-response effect. Third, respirators are significantly more effective than medical or cloth masks. Fourth, mask mandates are, overall, effective in reducing community transmission of respiratory pathogens. Fifth, masks are important sociocultural symbols; non-adherence to masking is sometimes linked to political and ideological beliefs and to widely circulated mis- or disinformation. Sixth, while there is much evidence that masks are not generally harmful to the general population, masking may be relatively contraindicated in individuals with certain medical conditions, who may require exemption. Furthermore, certain groups (notably D/deaf people) are disadvantaged when others are masked. Finally, there are risks to the environment from single-use masks and respirators. We propose an agenda for future research, including improved characterization of the situations in which masking should be recommended or mandated; attention to comfort and acceptability; generalized and disability-focused communication support in settings where masks are worn; and development and testing of novel materials and designs for improved filtration, breathability, and environmental impact.
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Affiliation(s)
- Trisha Greenhalgh
- Nuffield Department of Primary Care Health Sciences, University of Oxford, Oxford, United Kingdom
| | - C Raina MacIntyre
- Biosecurity Program, The Kirby Institute, University of New South Wales, Sydney, Australia
| | - Michael G Baker
- Department of Public Health, University of Otago, Wellington, New Zealand
| | - Shovon Bhattacharjee
- Biosecurity Program, The Kirby Institute, University of New South Wales, Sydney, Australia
- School of Mechanical and Manufacturing Engineering, University of New South Wales, Sydney, Australia
| | - Abrar A Chughtai
- School of Population Health, University of New South Wales, Sydney, Australia
| | - David Fisman
- Dalla Lana School of Public Health, University of Toronto, Toronto, Ontario, Canada
| | - Mohana Kunasekaran
- Biosecurity Program, The Kirby Institute, University of New South Wales, Sydney, Australia
| | - Amanda Kvalsvig
- Department of Public Health, University of Otago, Wellington, New Zealand
| | - Deborah Lupton
- Centre for Social Research in Health and Social Policy Research Centre, Faculty of Arts, Design and Architecture, University of New South Wales, Sydney, Australia
| | - Matt Oliver
- Professional Standards Advocate, Edmonton, Canada
| | - Essa Tawfiq
- Biosecurity Program, The Kirby Institute, University of New South Wales, Sydney, Australia
| | - Mark Ungrin
- Faculty of Veterinary Medicine; Department of Biomedical Engineering, Schulich School of Engineering; Alberta Children's Hospital Research Institute, University of Calgary, Calgary, Alberta, Canada
| | - Joe Vipond
- Department of Emergency Medicine, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada
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2
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Caffrey M, Jayakumar N, Caffrey V, Anirudhan V, Rong L, Paprotny I. VLP-based model for the study of airborne viral pathogens. Microbiol Spectr 2024; 12:e0001324. [PMID: 38752752 DOI: 10.1128/spectrum.00013-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2024] [Accepted: 04/21/2024] [Indexed: 05/28/2024] Open
Abstract
The recent COVID-19 pandemic has underscored the danger of airborne viral pathogens. The lack of model systems to study airborne pathogens limits the understanding of airborne pathogen distribution as well as potential surveillance and mitigation strategies. In this work, we develop a novel model system to study airborne pathogens using virus-like particles (VLPs). Specifically, we demonstrate the ability to aerosolize VLP and detect and quantify aerosolized VLP RNA by reverse transcription-loop-mediated isothermal amplification in real-time fluorescent and colorimetric assays. Importantly, the VLP model presents many advantages for the study of airborne viral pathogens: (i) similarity in size and surface components; (ii) ease of generation and noninfectious nature enabling the study of biosafety level 3 and biosafety level 4 viruses; (iii) facile characterization of aerosolization parameters; (iv) ability to adapt the system to other viral envelope proteins, including those of newly discovered pathogens and mutant variants; and (v) the ability to introduce viral sequences to develop nucleic acid amplification assays. IMPORTANCE The study and detection of airborne pathogens are hampered by the lack of appropriate model systems. In this work, we demonstrate that noninfectious virus-like particles (VLPs) represent attractive models to study airborne viral pathogens. Specifically, VLPs are readily prepared, are similar in size and composition to infectious viruses, and are amenable to highly sensitive nucleic acid amplification techniques.
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Affiliation(s)
- Michael Caffrey
- Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois, USA
| | - Nitin Jayakumar
- Department of Mechanical and Industrial Engineering, University of Illinois at Chicago, Chicago, Illinois, USA
| | - Veronique Caffrey
- Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois, USA
| | - Varada Anirudhan
- Department of Microbiology and Immunology, University of Illinois at Chicago, Chicago, Illinois, USA
| | - Lijun Rong
- Department of Microbiology and Immunology, University of Illinois at Chicago, Chicago, Illinois, USA
| | - Igor Paprotny
- Department of Electrical and Computer Engineering, University of Illinois at Chicago, Chicago, Illinois, USA
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Bøifot KO, Skogan G, Dybwad M. Sampling efficiency and nucleic acid stability during long-term sampling with different bioaerosol samplers. ENVIRONMENTAL MONITORING AND ASSESSMENT 2024; 196:577. [PMID: 38795190 PMCID: PMC11127824 DOI: 10.1007/s10661-024-12735-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 05/17/2024] [Indexed: 05/27/2024]
Abstract
Aerosol microbiome studies have received increased attention as technological advancements have made it possible to dive deeper into the microbial diversity. To enhance biomass collection for metagenomic sequencing, long-term sampling is a common strategy. While the impact of prolonged sampling times on microorganisms' culturability and viability is well-established, its effect on nucleic acid stability remains less understood but is essential to ensure representative sample collection. This study evaluated four air samplers (SKC BioSampler, SASS3100, Coriolis μ, BioSpot-VIVAS 300-P) against a reference sampler (isopore membrane filters) to identify nucleic acid stability during long-term sampling. Physical sampling efficiencies determined with a fluorescent tracer for three particle sizes (0.8, 1, and 3 μm), revealed high efficiencies (> 80% relative to reference) for BioSampler, SASS3100, and BioSpot-VIVAS for all particle sizes, and for Coriolis with 3 μm particles. Coriolis exhibited lower efficiency for 0.8 μm (7%) and 1 μm (50%) particles. During 2-h sampling with MS2 and Pantoea agglomerans, liquid-based collection with Coriolis and BioSampler showed a decrease in nucleic acid yields for all test conditions. BioSpot-VIVAS displayed reduced sampling efficiency for P. agglomerans compared to MS2 and the other air samplers, while filter-based collection with SASS3100 and isopore membrane filters, showed indications of DNA degradation for 1 μm particles of P. agglomerans after long-term sampling. These findings show that long-term air sampling affects nucleic acid stability in both liquid- and filter-based collection methods. These results highlight bias produced by bioaerosol collection and should be considered when selecting an air sampler and interpreting aerosol microbiome data.
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Affiliation(s)
- Kari Oline Bøifot
- Norwegian Defence Research Establishment, P.O. Box 25, NO-2027, Kjeller, Norway.
- Department of Analytical, Environmental and Forensic Sciences, King's College London, 150 Stamford Street, London, SE1 9NH, UK.
| | - Gunnar Skogan
- Norwegian Defence Research Establishment, P.O. Box 25, NO-2027, Kjeller, Norway
| | - Marius Dybwad
- Norwegian Defence Research Establishment, P.O. Box 25, NO-2027, Kjeller, Norway
- Department of Analytical, Environmental and Forensic Sciences, King's College London, 150 Stamford Street, London, SE1 9NH, UK
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Challener DW, Tande AJ, Koutras C, Wade RL, McIntee MA, Strauss DM, Yao X, Chang YH, Berbari E. Evaluation of germicidal ultraviolet-C disinfection in a real-world outpatient health care environment. Am J Infect Control 2024:S0196-6553(24)00528-5. [PMID: 38795903 DOI: 10.1016/j.ajic.2024.05.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2024] [Revised: 05/20/2024] [Accepted: 05/21/2024] [Indexed: 05/28/2024]
Abstract
BACKGROUND The coronavirus disease 2019 pandemic has highlighted the need for effective infection control in outpatient health care settings. Germicidal ultraviolet-C (GUV) light, known for inactivating microorganisms by damaging their deoxyribonucleic acid or ribonucleic acid, offers a potential solution. This study examines the efficacy of GUV air disinfection systems in real-world outpatient environments. METHODS We deployed upper-room and far-UV GUV fixtures in 3 outpatient facilities, assessing their impact on bacterial loads through air and surface sampling and bioindicator tests. Occupancy was also monitored. RESULTS While manual air and surface sampling did not show a significant difference in bacterial loads between control and Ultraviolet C-treated groups, bioindicator tests demonstrated a high level of spore inactivation (up to 99.7% for upper-room GUV and 96.26% for far-UV). Occupancy levels did not significantly influence these outcomes. DISCUSSION The discrepancy between bioindicator efficacy and environmental sampling results suggests limitations in the latter's ability to accurately capture environmental bioburden. Bioindicators proved to be reliable for in-situ validation of Ultraviolet C surface disinfection. CONCLUSIONS Bioindicators are effective for validating GUV surface disinfection efficacy in health care settings, though further research is needed to optimize environmental sampling methods for assessing GUV's impact on real-world bacterial loads.
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Affiliation(s)
- Douglas W Challener
- Division of Public Health, Infectious Diseases, and Occupational Medicine, Mayo Clinic, Rochester, MN.
| | - Aaron J Tande
- Division of Public Health, Infectious Diseases, and Occupational Medicine, Mayo Clinic, Rochester, MN
| | | | | | - Maggie A McIntee
- Department of Medicine Innovation Technology and Services, Mayo Clinic, Rochester, MN
| | - David M Strauss
- Department of Medicine Innovation Technology and Services, Mayo Clinic, Rochester, MN
| | - Xiaoxi Yao
- Robert D. and Patricia E. Kern Center for the Science of Health Care Delivery, Mayo Clinic, Rochester, MN
| | - Yu-Hui Chang
- Department of Quantitative Health Sciences, Mayo Clinic, Scottsdale, AZ
| | - Elie Berbari
- Division of Public Health, Infectious Diseases, and Occupational Medicine, Mayo Clinic, Rochester, MN
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5
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Rastmanesh A, Boruah JS, Lee MS, Park S. On-Site Bioaerosol Sampling and Airborne Microorganism Detection Technologies. BIOSENSORS 2024; 14:122. [PMID: 38534229 DOI: 10.3390/bios14030122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Revised: 02/09/2024] [Accepted: 02/21/2024] [Indexed: 03/28/2024]
Abstract
Bioaerosols are small airborne particles composed of microbiological fragments, including bacteria, viruses, fungi, pollens, and/or by-products of cells, which may be viable or non-viable wherever applicable. Exposure to these agents can cause a variety of health issues, such as allergic and infectious diseases, neurological disorders, and cancer. Therefore, detecting and identifying bioaerosols is crucial, and bioaerosol sampling is a key step in any bioaerosol investigation. This review provides an overview of the current bioaerosol sampling methods, both passive and active, as well as their applications and limitations for rapid on-site monitoring. The challenges and trends for detecting airborne microorganisms using molecular and immunological methods are also discussed, along with a summary and outlook for the development of prompt monitoring technologies.
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Affiliation(s)
- Afagh Rastmanesh
- Complex Fluids Laboratory, School of Mechanical Engineering, Korea University of Technology and Education, Cheonan 31253, Chungnam, Republic of Korea
| | - Jayanta S Boruah
- Complex Fluids Laboratory, School of Mechanical Engineering, Korea University of Technology and Education, Cheonan 31253, Chungnam, Republic of Korea
| | - Min-Seok Lee
- Complex Fluids Laboratory, School of Mechanical Engineering, Korea University of Technology and Education, Cheonan 31253, Chungnam, Republic of Korea
| | - Seungkyung Park
- Complex Fluids Laboratory, School of Mechanical Engineering, Korea University of Technology and Education, Cheonan 31253, Chungnam, Republic of Korea
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Tastassa AC, Sharaby Y, Lang-Yona N. Aeromicrobiology: A global review of the cycling and relationships of bioaerosols with the atmosphere. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:168478. [PMID: 37967625 DOI: 10.1016/j.scitotenv.2023.168478] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Revised: 10/31/2023] [Accepted: 11/08/2023] [Indexed: 11/17/2023]
Abstract
Airborne microorganisms and biological matter (bioaerosols) play a key role in global biogeochemical cycling, human and crop health trends, and climate patterns. Their presence in the atmosphere is controlled by three main stages: emission, transport, and deposition. Aerial survival rates of bioaerosols are increased through adaptations such as ultra-violet radiation and desiccation resistance or association with particulate matter. Current research into modern concerns such as climate change, global gene transfer, and pathogenicity often neglects to consider atmospheric involvement. This comprehensive review outlines the transpiring of bioaerosols across taxa in the atmosphere, with significant focus on their interactions with environmental elements including abiotic factors (e.g., atmospheric composition, water cycle, and pollution) and events (e.g., dust storms, hurricanes, and wildfires). The aim of this review is to increase understanding and shed light on needed research regarding the interplay between global atmospheric phenomena and the aeromicrobiome. The abundantly documented bacteria and fungi are discussed in context of their cycling and human health impacts. Gaps in knowledge regarding airborne viral community, the challenges and importance of studying their composition, concentrations and survival in the air are addressed, along with understudied plant pathogenic oomycetes, and archaea cycling. Key methodologies in sampling, collection, and processing are described to provide an up-to-date picture of ameliorations in the field. We propose optimization to microbiological methods, commonly used in soil and water analysis, that adjust them to the context of aerobiology, along with other directions towards novel and necessary advancements. This review offers new perspectives into aeromicrobiology and calls for advancements in global-scale bioremediation, insights into ecology, climate change impacts, and pathogenicity transmittance.
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Affiliation(s)
- Ariel C Tastassa
- Civil and Environmental Engineering, Technion - Israel Institute of Technology, 3200003 Haifa, Israel
| | - Yehonatan Sharaby
- Civil and Environmental Engineering, Technion - Israel Institute of Technology, 3200003 Haifa, Israel
| | - Naama Lang-Yona
- Civil and Environmental Engineering, Technion - Israel Institute of Technology, 3200003 Haifa, Israel.
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7
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Brągoszewska E, Mainka A. Assessment of personal deposited dose and particle size distribution of bacterial aerosol in kindergarten located in southern Poland. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 343:123208. [PMID: 38142028 DOI: 10.1016/j.envpol.2023.123208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 11/28/2023] [Accepted: 12/20/2023] [Indexed: 12/25/2023]
Abstract
The study's primary focus lies in examining the relationship between respiratory and deposition doses of bacterial aerosols in urban kindergarten, providing valuable insights into the specific doses absorbed by individuals in different sections of their respiratory systems based on the aerodynamic diameter of bacterial particles. Samples were collected twice a week, using by an Andersen cascade impactor during autumn and winter seasons 2018/2019 resulting in a total of 1152 Petri dishes analyzed. The highest average concentration of bacterial aerosol was observed during autumn (1698 ± 663 CFU/m3) in comparison to winter months (723 ± 134 CFU/m3). Respirable doses for children and staff were 2945 and 2441 CFU/day during winter and 5988 and 4964 CFU/day during autumn, respectively. Deposition doses incorporated from empirical models for regional deposition in the respiratory tract showed that children in kindergarten absorb 33% less of bacteria into alveolar region if breath by nose instead of mouth. Additionally, risk assessment results indicate that the hazard indices for children attending kindergartens for 3 years and for staff working 25 years are below 1, suggesting minor risks associated with the inhalation of bioaerosols during autumn and winter. HI was <1, so the non-carcinogenic effects are on an acceptable level, but the indoor/outdoor ratio were 3.5 and 2.4 for autumn and winter, respectively, indicating children's and adult's exposure to bacterial aerosol should be reduced.
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Affiliation(s)
- Ewa Brągoszewska
- Department of Technologies and Installations for Waste Management, Faculty of Energy and Environmental Engineering, Silesian University of Technology, 18 Konarskiego St., 44-100, Gliwice, Poland.
| | - Anna Mainka
- Department of Air Protection, Silesian University of Technology, 22B Konarskiego St., 44-100, Gliwice, Poland.
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Zhou X, Liu X, Zhao H, Guo G, Jiang X, Liu S, Sun X, Yang H. Research advances in microfluidic collection and detection of virus, bacterial, and fungal bioaerosols. Mikrochim Acta 2024; 191:132. [PMID: 38351367 DOI: 10.1007/s00604-024-06213-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Accepted: 01/14/2024] [Indexed: 02/16/2024]
Abstract
Bioaerosols are airborne suspensions of fine solid or liquid particles containing biological substances such as viruses, bacteria, cellular debris, fungal spores, mycelium, and byproducts of microbial metabolism. The global Coronavirus disease 2019 (COVID-19) pandemic and the previous emergence of severe acute respiratory syndrome (SARS), Middle East respiratory syndrome (MERS), and influenza have increased the need for reliable and effective monitoring tools for bioaerosols. Bioaerosol collection and detection have aroused considerable attention. Current bioaerosol sampling and detection techniques suffer from long response time, low sensitivity, and high costs, and these drawbacks have forced the development of novel monitoring strategies. Microfluidic technique is considered a breakthrough for high performance analysis of bioaerosols. In recent years, several emerging methods based on microfluidics have been developed and reported for collection and detection of bioaerosols. The unique advantages of microfluidic technique have enabled the integration of bioaerosol collection and detection, which has a higher efficiency over conventional methods. This review focused on the research progress of bioaerosol collection and detection methods based on microfluidic techniques, with special attention on virus aerosols and bacterial aerosols. Different from the existing reviews, this work took a unique perspective of the targets to be collected and detected in bioaerosols, which would provide a direct index of bioaerosol categories readers may be interested in. We also discussed integrated microfluidic monitoring system for bioaerosols. Additionally, the application of bioaerosol detection in biomedicine was presented. Finally, the current challenges in the field of bioaerosol monitoring are presented and an outlook given of future developments.
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Affiliation(s)
- Xinyue Zhou
- Department of Respiratory Medicine, The Fourth Hospital of China Medical University, No. 4, Chongshan East Road, Huanggu District, Shenyang, 110032, Liaoning, China
| | - Xin Liu
- Department of Respiratory Medicine, The Fourth Hospital of China Medical University, No. 4, Chongshan East Road, Huanggu District, Shenyang, 110032, Liaoning, China
| | - Haiyang Zhao
- Teaching Center for Basic Medical Experiment, China Medical University, No.77, Puhe Road, Shenyang, 110122, Liaoning Province, China
| | - Guanqi Guo
- Teaching Center for Basic Medical Experiment, China Medical University, No.77, Puhe Road, Shenyang, 110122, Liaoning Province, China
| | - Xiran Jiang
- School of Intelligent Medicine, China Medical University, No.77, Puhe Road, Shenyang, 110122, Liaoning Province, China.
| | - Shuo Liu
- Department of Respiratory Medicine, The Fourth Hospital of China Medical University, No. 4, Chongshan East Road, Huanggu District, Shenyang, 110032, Liaoning, China.
| | - Xiaoting Sun
- School of Forensic Medicine, China Medical University, No.77, Puhe Road, Shenyang, 110122, Liaoning Province, China.
| | - Huazhe Yang
- School of Intelligent Medicine, China Medical University, No.77, Puhe Road, Shenyang, 110122, Liaoning Province, China.
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9
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Yerlikaya S, Broger T, Isaacs C, Bell D, Holtgrewe L, Gupta-Wright A, Nahid P, Cattamanchi A, Denkinger CM. Blazing the trail for innovative tuberculosis diagnostics. Infection 2024; 52:29-42. [PMID: 38032537 PMCID: PMC10811035 DOI: 10.1007/s15010-023-02135-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 11/01/2023] [Indexed: 12/01/2023]
Abstract
The COVID-19 pandemic brought diagnostics into the spotlight in an unprecedented way not only for case management but also for population health, surveillance, and monitoring. The industry saw notable levels of investment and accelerated research which sparked a wave of innovation. Simple non-invasive sampling methods such as nasal swabs have become widely used in settings ranging from tertiary hospitals to the community. Self-testing has also been adopted as standard practice using not only conventional lateral flow tests but novel and affordable point-of-care molecular diagnostics. The use of new technologies, including artificial intelligence-based diagnostics, have rapidly expanded in the clinical setting. The capacity for next-generation sequencing and acceptance of digital health has significantly increased. However, 4 years after the pandemic started, the market for SARS-CoV-2 tests is saturated, and developers may benefit from leveraging their innovations for other diseases; tuberculosis (TB) is a worthwhile portfolio expansion for diagnostics developers given the extremely high disease burden, supportive environment from not-for-profit initiatives and governments, and the urgent need to overcome the long-standing dearth of innovation in the TB diagnostics field. In exchange, the current challenges in TB detection may be resolved by adopting enhanced swab-based molecular methods, instrument-based, higher sensitivity antigen detection technologies, and/or artificial intelligence-based digital health technologies developed for COVID-19. The aim of this article is to review how such innovative approaches for COVID-19 diagnosis can be applied to TB to have a comparable impact.
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Affiliation(s)
- Seda Yerlikaya
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany.
| | - Tobias Broger
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
| | | | - David Bell
- Independent Consultant, Lake Jackson, TX, USA
| | - Lydia Holtgrewe
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
| | - Ankur Gupta-Wright
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
- Institute for Global Health, University College London, London, UK
| | - Payam Nahid
- UCSF Center for Tuberculosis, University of California San Francisco, San Francisco, CA, USA
| | - Adithya Cattamanchi
- UCSF Center for Tuberculosis, University of California San Francisco, San Francisco, CA, USA
- Division of Pulmonary Diseases and Critical Care Medicine, University of California Irvine, Irvine, CA, USA
| | - Claudia M Denkinger
- Division of Infectious Diseases and Tropical Medicine, Heidelberg University Hospital and Faculty of Medicine, Heidelberg University, Heidelberg, Germany
- German Centre for Infection Research, Partner Site Heidelberg University Hospital, Heidelberg, Germany
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10
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Caffrey M, Jayakumar N, Caffrey V, Anirudan V, Rong L, Paprotny I. VLP-Based Model for Study of Airborne Viral Pathogens. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.03.574055. [PMID: 38260552 PMCID: PMC10802359 DOI: 10.1101/2024.01.03.574055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
Abstract
The recent COVID-19 pandemic has underscored the danger of airborne viral pathogens. The lack of model systems to study airborne pathogens limits the understanding of airborne pathogen distribution, as well as potential surveillance and mitigation strategies. In this work, we develop a novel model system to study airborne pathogens using virus like particles (VLP). Specifically, we demonstrate the ability to aerosolize VLP and detect and quantify aerosolized VLP RNA by Reverse Transcription-Loop-Mediated Isothermal Amplification (RT-LAMP) in real-time fluorescent and colorimetric assays. Importantly, the VLP model presents many advantages for the study of airborne viral pathogens: (i) similarity in size and surface components; (ii) ease of generation and noninfectious nature enabling study of BSL3 and BSL4 viruses; (iii) facile characterization of aerosolization parameters; (iv) ability to adapt the system to other viral envelope proteins including those of newly discovered pathogens and mutant variants; (v) the ability to introduce viral sequences to develop nucleic acid amplification assays.
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Affiliation(s)
- Michael Caffrey
- Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, IL 60607
| | - Nitin Jayakumar
- Department of Mechanical and Industrial Engineering, University of Illinois at Chicago, Chicago, IL 60607
| | - Veronique Caffrey
- Department of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, IL 60607
| | - Varada Anirudan
- Department of Microbiology and Immunology, University of Illinois at Chicago, Chicago, IL 60612
| | - Lijun Rong
- Department of Microbiology and Immunology, University of Illinois at Chicago, Chicago, IL 60612
| | - Igor Paprotny
- Department of Electrical and Computer Engineering, University of Illinois at Chicago, Chicago, IL 60607
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11
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Guo J, Lv M, Liu Z, Qin T, Qiu H, Zhang L, Lu J, Hu L, Yang W, Zhou D. Comprehensive performance evaluation of six bioaerosol samplers based on an aerosol wind tunnel. ENVIRONMENT INTERNATIONAL 2024; 183:108402. [PMID: 38150804 DOI: 10.1016/j.envint.2023.108402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Revised: 12/19/2023] [Accepted: 12/20/2023] [Indexed: 12/29/2023]
Abstract
Choosing a suitable bioaerosol sampler for atmospheric microbial monitoring has been a challenge to researchers interested in environmental microbiology, especially during a pandemic. However, a comprehensive and integrated evaluation method to fully assess bioaerosol sampler performance is still lacking. Herein, we constructed a customized wind tunnel operated at 2-20 km/h wind speed to systematically and efficiently evaluate the performance of six frequently used samplers, where various aerosols, including Arizona test dust, bacterial spores, gram-positive and gram-negative bacteria, phages, and viruses, were generated. After 10 or 60 min of sampling, the physical and biological sampling efficiency and short or long-term sampling capabilities were determined by performing aerodynamic particle size analysis, live microbial culturing, and a qPCR assay. The results showed that AGI-30 and BioSampler impingers have good physical and biological sampling efficiencies for short-term sampling. However, their ability to capture aerosols at low concentrations is restricted. SASS 2300 and BSA-350 wet-wall cyclones had excellent enrichment ratios and high microbial cultivability in both short-term and long-term sampling; however, they were not suitable for quantitative studies of aerosols. Polycarbonate filter samplers showed outstanding performance in physical and long-term sampling but lacked the ability to maintain microbial activity, which can be improved by gelatin filter samplers. However, limitations remain for some fragile microorganisms, such as E. coli phage PhiX174 and coronavirus GX_P2V. In addition, the effects of wind speed and direction should be considered when sampling particles larger than 4 µm. This study provides an improved strategy and guidance for the characterization and selection of a bioaerosol sampler for better measurement and interpretation of collected ambient bioaerosols.
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Affiliation(s)
- Jianshu Guo
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China; Department of Environmental Health, School of Public Health and the Key Laboratory of Public Health Safety, Fudan University, Shanghai, China
| | - Meng Lv
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Zhijian Liu
- Department of Power Engineering, North China Electric Power University, Baoding, Hebei, China
| | - Tongtong Qin
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Hongying Qiu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Lili Zhang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Jianchun Lu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Lingfei Hu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China
| | - Wenhui Yang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
| | - Dongsheng Zhou
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.
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Saibu S, Uhanie Perera I, Suzuki S, Rodó X, Fujiyoshi S, Maruyama F. Resistomes in freshwater bioaerosols and their impact on drinking and recreational water safety: A perspective. ENVIRONMENT INTERNATIONAL 2024; 183:108377. [PMID: 38103344 DOI: 10.1016/j.envint.2023.108377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Revised: 12/07/2023] [Accepted: 12/07/2023] [Indexed: 12/19/2023]
Abstract
Antibiotic resistance genes (ARGs) are widespread environmental pollutants of biological origin that pose a significant threat to human, animal, and plant health, as well as to ecosystems. ARGs are found in soil, water, air, and waste, and several pathways for global dissemination in the environment have been described. However, studies on airborne ARG transport through atmospheric particles are limited. The ARGs in microorganisms inhabiting an environment are referred to as the "resistome". A global search was conducted of air-resistome studies by retrieving bioaerosol ARG-related papers published in the last 30 years from PubMed. We found that there is no dedicated methodology for isolating ARGs in bioaerosols; instead, conventional methods for microbial culture and metagenomic analysis are used in combination with standard aerosol sampling techniques. There is a dearth of information on the bioaerosol resistomes of freshwater environments and their impact on freshwater sources used for drinking and recreational activities. More studies of aerobiome freshwater environments are needed to ensure the safe use of water and sanitation. In this review we outline and synthesize the few studies that address the freshwater air microbiome (from tap water, bathroom showers, rivers, lakes, and swimming pools) and their resistomes, as well as the likely impacts on drinking and recreational waters. We also discuss current knowledge gaps for the freshwater airborne resistome. This review will stimulate new investigations of the atmospheric microbiome, particularly in areas where both air and water quality are of public health concern.
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Affiliation(s)
- Salametu Saibu
- Department of Microbiology, Lagos State University of Ojo, Lagos, Nigeria
| | - Ishara Uhanie Perera
- Section of Microbial Genomics and Ecology, Planetary Health and Innovation Science Center (PHIS), The IDEC Institute, Hiroshima University, Japan
| | - Satoru Suzuki
- Graduate School of Science and Engineering, Center for Marine Environmental Studies, Ehime University, Japan
| | - Xavier Rodó
- ICREA and CLIMA Program, Barcelona Institute for Global Health (-ISGlobal), Barcelona, Spain
| | - So Fujiyoshi
- Section of Microbial Genomics and Ecology, Planetary Health and Innovation Science Center (PHIS), The IDEC Institute, Hiroshima University, Japan
| | - Fumito Maruyama
- Section of Microbial Genomics and Ecology, Planetary Health and Innovation Science Center (PHIS), The IDEC Institute, Hiroshima University, Japan.
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Ouyang H, Wang L, Sapkota D, Yang M, Morán J, Li L, Olson BA, Schwartz M, Hogan CJ, Torremorell M. Control technologies to prevent aerosol-based disease transmission in animal agriculture production settings: a review of established and emerging approaches. Front Vet Sci 2023; 10:1291312. [PMID: 38033641 PMCID: PMC10682736 DOI: 10.3389/fvets.2023.1291312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Accepted: 10/26/2023] [Indexed: 12/02/2023] Open
Abstract
Transmission of infectious agents via aerosols is an ever-present concern in animal agriculture production settings, as the aerosol route to disease transmission can lead to difficult-to-control and costly diseases, such as porcine respiratory and reproductive syndrome virus and influenza A virus. It is increasingly necessary to implement control technologies to mitigate aerosol-based disease transmission. Here, we review currently utilized and prospective future aerosol control technologies to collect and potentially inactivate pathogens in aerosols, with an emphasis on technologies that can be incorporated into mechanically driven (forced air) ventilation systems to prevent aerosol-based disease spread from facility to facility. Broadly, we find that control technologies can be grouped into three categories: (1) currently implemented technologies; (2) scaled technologies used in industrial and medical settings; and (3) emerging technologies. Category (1) solely consists of fibrous filter media, which have been demonstrated to reduce the spread of PRRSV between swine production facilities. We review the mechanisms by which filters function and are rated (minimum efficiency reporting values). Category (2) consists of electrostatic precipitators (ESPs), used industrially to collect aerosol particles in higher flow rate systems, and ultraviolet C (UV-C) systems, used in medical settings to inactivate pathogens. Finally, category (3) consists of a variety of technologies, including ionization-based systems, microwaves, and those generating reactive oxygen species, often with the goal of pathogen inactivation in aerosols. As such technologies are typically first tested through varied means at the laboratory scale, we additionally review control technology testing techniques at various stages of development, from laboratory studies to field demonstration, and in doing so, suggest uniform testing and report standards are needed. Testing standards should consider the cost-benefit of implementing the technologies applicable to the livestock species of interest. Finally, we examine economic models for implementing aerosol control technologies, defining the collected infectious particles per unit energy demand.
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Affiliation(s)
- Hui Ouyang
- Department of Mechanical Engineering, University of Minnesota, Minneapolis, MN, United States
- Department of Mechanical Engineering, University of Texas-Dallas, Richardson, TX, United States
| | - Lan Wang
- Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, United States
| | - Deepak Sapkota
- Department of Mechanical Engineering, University of Texas-Dallas, Richardson, TX, United States
| | - My Yang
- Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, United States
| | - José Morán
- Department of Mechanical Engineering, University of Minnesota, Minneapolis, MN, United States
| | - Li Li
- Department of Mechanical Engineering, University of Minnesota, Minneapolis, MN, United States
| | - Bernard A. Olson
- Department of Mechanical Engineering, University of Minnesota, Minneapolis, MN, United States
| | - Mark Schwartz
- Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, United States
- Schwartz Farms, Sleepy Eye, MN, United States
| | - Christopher J. Hogan
- Department of Mechanical Engineering, University of Minnesota, Minneapolis, MN, United States
| | - Montserrat Torremorell
- Department of Veterinary Population Medicine, University of Minnesota, Saint Paul, MN, United States
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Sajjad B, Hussain S, Rasool K, Hassan M, Almomani F. Comprehensive insights into advances in ambient bioaerosols sampling, analysis and factors influencing bioaerosols composition. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 336:122473. [PMID: 37659632 DOI: 10.1016/j.envpol.2023.122473] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Revised: 08/20/2023] [Accepted: 08/27/2023] [Indexed: 09/04/2023]
Abstract
While the study of bioaerosols has a long history, it has garnered heightened interest in the past few years, focusing on both culture-dependent and independent sampling and analysis approaches. Observations have been made regarding the seasonal fluctuations in microbial communities and their connection to particular ambient atmospheric factors. The study of airborne microbial communities is important in public health and atmospheric processes. Nevertheless, the establishment of standardized protocols for evaluating airborne microbial communities and utilizing microbial taxonomy as a means to identify distinct bioaerosols sources and seasonal patterns remains relatively unexplored. This article discusses the challenges and limitations of ambient bioaerosols sampling and analysis, including the lack of standardized methods and the heterogeneity of sources. Future prospects in the field of bioaerosols, including the use of high-throughput sequencing technologies, omics studies, spectroscopy and fluorescence-based monitoring to provide comprehensive incite on metabolic capacity, and activity are also presented. Furthermore, the review highlights the factors that affect bioaerosols composition, including seasonality, atmospheric conditions, and pollution levels. Overall, this review provides a valuable resource for researchers, policymakers, and stakeholders interested in understanding and managing bioaerosols in various environments.
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Affiliation(s)
- Bilal Sajjad
- Qatar Environment and Energy Research Institute (QEERI), Hamad Bin Khalifa University, Qatar Foundation, P.O. Box 5825, Doha, Qatar; Department of Chemical Engineering, Qatar University, P. O. Box 2713, Doha, Qatar
| | - Sabir Hussain
- Department of Environmental Science, Institute of Space Technology, Islamabad, Pakistan
| | - Kashif Rasool
- Qatar Environment and Energy Research Institute (QEERI), Hamad Bin Khalifa University, Qatar Foundation, P.O. Box 5825, Doha, Qatar.
| | - Mujtaba Hassan
- Department of Environmental Science, Institute of Space Technology, Islamabad, Pakistan
| | - Fares Almomani
- Department of Chemical Engineering, Qatar University, P. O. Box 2713, Doha, Qatar
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15
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Rashid SA, Nazakat R, Muhamad Robat R, Ismail R, Suppiah J, Rajendran K, Raj Louis Masalamany ASS, Muhamad Hendri NA, Mohamad N, Khairul Hasni NA, Suib FA, Nik Hassan NMN, Pahrol MA, Shaharudin R. Droplet digital PCR application for the detection of SARS-CoV-2 in air sample. Front Public Health 2023; 11:1208348. [PMID: 37965510 PMCID: PMC10641526 DOI: 10.3389/fpubh.2023.1208348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2023] [Accepted: 10/09/2023] [Indexed: 11/16/2023] Open
Abstract
Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) may transmit through airborne route particularly when the aerosol particles remain in enclosed spaces with inadequate ventilation. There has been no standard recommended method of determining the virus in air due to limitations in pre-analytical and technical aspects. Furthermore, the presence of low virus loads in air samples could result in false negatives. Our study aims to explore the feasibility of detecting SARS-CoV-2 ribonucleic acid (RNA) in air samples using droplet digital polymerase chain reaction (ddPCR). Active and passive air sampling was conducted between December 2021 and February 2022 with the presence of COVID-19 confirmed cases in two hospitals and a quarantine center in Klang Valley, Malaysia. SARS-CoV-2 RNA in air was detected and quantified using ddPCR and real-time reverse transcriptase-polymerase chain reaction (RT-PCR). The comparability of two different digital PCR platforms (QX200 and QIAcuity) to RT-PCR were also investigated. Additionally negative staining transmission electron microscopy was performed to visualize virus ultrastructure. Detection rates of SARS-CoV-2 in air samples using ddPCR were higher compared to RT-PCR, which were 15.2% (22/145) and 3.4% (5/145), respectively. The sensitivity and specificity of ddPCR was 100 and 87%, respectively. After excluding 17 negative samples (50%) by both QX200 and QIAcuity, 15% samples (5/34) were found to be positive both ddPCR and dPCR. There were 23.5% (8/34) samples that were detected positive by ddPCR but negative by dPCR. In contrast, there were 11.7% (4/34) samples that were detected positive by dPCR but negative by ddPCR. The SARS-CoV-2 detection method by ddPCR is precise and has a high sensitivity for viral RNA detection. It could provide advances in determining low viral titter in air samples to reduce false negative reports, which could complement detection by RT-PCR.
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Affiliation(s)
- Siti Aishah Rashid
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Raheel Nazakat
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Rosnawati Muhamad Robat
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Rohaida Ismail
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Jeyanthi Suppiah
- Infectious Disease Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Kamesh Rajendran
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - A. S. Santhana Raj Louis Masalamany
- Special Resource Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Nur Afrina Muhamad Hendri
- Special Resource Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Nadia Mohamad
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Nurul Amalina Khairul Hasni
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Fatin Amirah Suib
- Infectious Disease Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Nik Muhamad Nizam Nik Hassan
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Muhammad Alfatih Pahrol
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
| | - Rafiza Shaharudin
- Environmental Health Research Centre, Institute for Medical Research, National Institutes of Health, Ministry of Health Malaysia, Shah Alam, Selangor, Malaysia
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Yang L, Li W, Qi S, Jiang Q, Huang N, Yang Y, Ma D, Zhang W, Chen H, Zhu R. A Survey of Airborne Fungi and Their Sensitization Profile in Wuhan, China. Int Arch Allergy Immunol 2023; 184:1153-1164. [PMID: 37611554 DOI: 10.1159/000531245] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 05/09/2023] [Indexed: 08/25/2023] Open
Abstract
INTRODUCTION Airborne fungi induce allergic symptoms in 3-10% of the population worldwide. To better prevent and manage fungi-related allergic diseases, it is essential to identify the genus and the distribution profile of airborne fungi. METHODS With this purpose in mind, we carried out a 12-month volumetric sampling study to monitor the airborne fungi and retrospectively analyzed the sensitization profile of four dominant fungi (Cladosporium, Alternaria, Aspergillus, and Penicillium) among respiratory allergies during the same study period in Wuhan, China. RESULTS A total of 29 different fungal genuses were identified, and the peak fungal concentration period was found to be in September and October, followed by May and June. The most prevalent fungi in this area were Cladosporium (36.36%), Ustilago (20.12%), and Alternaria (13.87%). In addition, the skin prick test data from 1,365 respiratory allergies patients showed that 202 (14.80%) of them were sensitized to fungi. The sensitization rates to Cladosporium, Alternaria, Aspergillus, and Penicillium were 11.72%, 4.69%, 1.98%, and 4.76%, respectively. The seasonal fluctuation of Alternaria and Aspergillus correlated with their sensitization rates. Among the fungal sensitized patients, 76 (37.62%) were sensitized to two or more kinds of fungi. The serum-specific IgE tests suggested low to high correlations existed between these fungi; however, these correlations were not found between fungi and other allergens. CONCLUSION Our study provides the distribution profile and reveals the clinical significance of the airborne fungi in Wuhan, which will facilitate the precise management of fungal allergy.
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Affiliation(s)
- Lin Yang
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China,
- Institute of Allergy and Clinical Immunology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China,
| | - Wenjing Li
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Shanshan Qi
- Department of Allergy, Wuhan No. 1 Hospital, Wuhan, China
| | - Qing Jiang
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Nan Huang
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Yaqi Yang
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Dongxia Ma
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Wei Zhang
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Hao Chen
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
- Institute of Allergy and Clinical Immunology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
| | - Rongfei Zhu
- Department of Allergy, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
- Institute of Allergy and Clinical Immunology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China
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Mincuzzi A, Picciotti U, Sanzani SM, Garganese F, Palou L, Addante R, Ragni M, Ippolito A. Postharvest Diseases of Pomegranate: Alternative Control Means and a Spiderweb Effect. J Fungi (Basel) 2023; 9:808. [PMID: 37623578 PMCID: PMC10456121 DOI: 10.3390/jof9080808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 07/25/2023] [Accepted: 07/27/2023] [Indexed: 08/26/2023] Open
Abstract
The pomegranate is a fruit known since ancient times for its beneficial properties. It has recently aroused great interest in the industry and among consumers, leading to a significant increase in demand. Consequently, its cultivation has been boosted all over the world. The pomegranate crop suffers considerable yield losses, especially at the postharvest stage, because it is a "minor crop" with few permitted control means. To control latent (Alternaria spp., Botrytis spp., Coniella spp., Colletotrichum spp., and Cytospora spp.) and wound (Aspergillus spp., Penicillium spp., and Talaromyces spp.) fungal pathogens, different alternative compounds, previously evaluated in vitro, were tested in the field on pomegranate cv. Wonderful. A chitosan solution, a plant protein hydrolysate, and a red seaweed extract were compared with a chemical control treatment, all as preharvest (field application) and postharvest treatments and their combinations. At the end of the storage period, the incidence of stamen infections and external and internal rots, and the severity of internal decay were evaluated. Obtained data revealed that pre- and postharvest application of all substances reduced the epiphytic population on stamens. Preharvest applications of seaweed extract and plant hydrolysate were the most effective treatments to reduce the severity of internal pomegranate decays. Furthermore, the influence of spider (Cheiracanthium mildei) cocoons on the fruit calyx as a possible barrier against postharvest fungal pathogens was assessed in a 'Mollar de Elche' pomegranate organic orchard. Compared to no-cocoon fruit (control), the incidence of infected stamens and internal molds in those with spiderwebs was reduced by about 30%, and the mean severity of internal rots was halved. Spiderwebs analyzed via Scanning Electron Microscopy (SEM) disclosed a layered, unordered structure that did not allow for the passage of fungal spores due to its mean mesh size (1 to 20 µm ca). The aims of this research were (i) to evaluate alternative compounds useful to control postharvest pomegranate decays and (ii) to evaluate the effectiveness of spiders in reducing postharvest fungal infections by analyzing related mechanisms of action. Alternative control means proposed in the present work and calyx spider colonization may be helpful to reduce postharvest pomegranate diseases, yield losses, and waste production in an integrated control strategy, satisfying organic agriculture and the planned goals of Zero Hunger Challenge launched by the United Nations.
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Affiliation(s)
- Annamaria Mincuzzi
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
| | - Ugo Picciotti
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
- Department of Marine Science and Applied Biology, University of Alicante, 03690 Alicante, Spain
| | - Simona Marianna Sanzani
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
| | - Francesca Garganese
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
| | - Lluís Palou
- Pathology Laboratory, Postharvest Technology Center (CTP), Valencian Institute of Agrarian Research (IVIA), CV-315, Km 10.7, Montcada, 46113 Valencia, Spain;
| | - Rocco Addante
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
| | - Marco Ragni
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
| | - Antonio Ippolito
- Department of Soil, Plant, and Food Sciences, University of Bari Bari Aldo Moro, Via Amendola 165/A, 70126 Bari, Italy; (U.P.); (S.M.S.); (F.G.); (R.A.); (M.R.); (A.I.)
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18
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Santarpia JL, Klug E, Ravnholdt A, Kinahan SM. Environmental sampling for disease surveillance: Recent advances and recommendations for best practice. JOURNAL OF THE AIR & WASTE MANAGEMENT ASSOCIATION (1995) 2023; 73:434-461. [PMID: 37224401 DOI: 10.1080/10962247.2023.2197825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 02/15/2023] [Accepted: 03/10/2023] [Indexed: 05/26/2023]
Abstract
The study of infectious diseases includes both the progression of the disease in its host and how it transmits between hosts. Understanding disease transmission is important for recommending effective interventions, protecting healthcare workers, and informing an effective public health response. Sampling the environment for infectious diseases is critical to public health since it can provide an understanding of the mechanisms of transmission, characterization of contamination in hospitals and other public areas, and the spread of a disease within a community. Measurements of biological aerosols, particularly those that may cause disease, have been an ongoing topic of research for decades, and so a wide variety of technological solutions exist. This wide field of possibilities can create confusion, particularly when different approaches yield different answers. Therefore, guidelines for best practice in this area are important to allow more effective use of this data in public health decisions. This review examines air, surface and water/wastewater sampling methods, with a focus on aerosol sampling, and a goal of recommending approaches to designing and implementing sampling systems that may incorporate multiple strategies. This is accomplished by developing a framework for designing and evaluating a sampling strategy, reviewing current practices and emerging technologies for sampling and analysis, and recommending guidelines for best practice in the area of aerosol sampling for infectious disease.
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Affiliation(s)
- Joshua L Santarpia
- The Global Center for Health Security, University of Nebraska Medical Center, Omaha, NE, USA
- Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA
- National Strategic Research Institute, Omaha, NE, USA
| | - Elizabeth Klug
- The Global Center for Health Security, University of Nebraska Medical Center, Omaha, NE, USA
- Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE, USA
| | - Ashley Ravnholdt
- The Global Center for Health Security, University of Nebraska Medical Center, Omaha, NE, USA
| | - Sean M Kinahan
- The Global Center for Health Security, University of Nebraska Medical Center, Omaha, NE, USA
- National Strategic Research Institute, Omaha, NE, USA
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19
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Hou J, Fujiyoshi S, Perera IU, Nishiuchi Y, Nakajima M, Ogura D, Yarimizu K, Maruyama F. Perspectives on Sampling and New Generation Sequencing Methods for Low-Biomass Bioaerosols in Atmospheric Environments. J Indian Inst Sci 2023; 103:1-11. [PMID: 37362849 PMCID: PMC10176311 DOI: 10.1007/s41745-023-00380-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Accepted: 03/13/2023] [Indexed: 06/28/2023]
Abstract
Bioaerosols play essential roles in the atmospheric environment and can affect human health. With a few exceptions (e.g., farm or rainforest environments), bioaerosol samples from wide-ranging environments typically have a low biomass, including bioaerosols from indoor environments (e.g., residential homes, offices, or hospitals), outdoor environments (e.g., urban or rural air). Some specialized environments (e.g., clean rooms, the Earth's upper atmosphere, or the international space station) have an ultra-low-biomass. This review discusses the primary sources of bioaerosols and influencing factors, the recent advances in air sampling techniques and the new generation sequencing (NGS) methods used for the characterization of low-biomass bioaerosol communities, and challenges in terms of the bias introduced by different air samplers when samples are subjected to NGS analysis with a focus on ultra-low biomass. High-volume filter-based or liquid-based air samplers compatible with NGS analysis are required to improve the bioaerosol detection limits for microorganisms. A thorough understanding of the performance and outcomes of bioaerosol sampling using NGS methods and a robust protocol for aerosol sample treatment for NGS analysis are needed. Advances in NGS techniques and bioinformatic tools will contribute toward the precise high-throughput identification of the taxonomic profiles of bioaerosol communities and the determination of their functional and ecological attributes in the atmospheric environment. In particular, long-read amplicon sequencing, viability PCR, and meta-transcriptomics are promising techniques for discriminating and detecting pathogenic microorganisms that may be active and infectious in bioaerosols and, therefore, pose a threat to human health. Supplementary Information The online version contains supplementary material available at 10.1007/s41745-023-00380-x.
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Affiliation(s)
- Jianjian Hou
- Microbial Genomics and Ecology, Center for the Planetary Health and Innovation Science (PHIS), The IDEC Institute, Hiroshima University, Hiroshima, 739-0046 Japan
| | - So Fujiyoshi
- Microbial Genomics and Ecology, Center for the Planetary Health and Innovation Science (PHIS), The IDEC Institute, Hiroshima University, Hiroshima, 739-0046 Japan
- Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Hiroshima, 739-0046 Japan
| | - Ishara Uhanie Perera
- Microbial Genomics and Ecology, Center for the Planetary Health and Innovation Science (PHIS), The IDEC Institute, Hiroshima University, Hiroshima, 739-0046 Japan
| | - Yukiko Nishiuchi
- Microbial Genomics and Ecology, Center for the Planetary Health and Innovation Science (PHIS), The IDEC Institute, Hiroshima University, Hiroshima, 739-0046 Japan
| | - Makiko Nakajima
- Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Hiroshima, 739-0046 Japan
- Department of Architectural Engineering, Faculty of Engineering, Hiroshima Institute of Technology, Hiroshima, 731-5193 Japan
| | - Daisuke Ogura
- Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Hiroshima, 739-0046 Japan
- Department of Architecture and Architectural Engineering, Graduate School of Engineering, Kyoto University, Kyoto, 615-8540 Japan
| | - Kyoko Yarimizu
- Microbial Genomics and Ecology, Center for the Planetary Health and Innovation Science (PHIS), The IDEC Institute, Hiroshima University, Hiroshima, 739-0046 Japan
| | - Fumito Maruyama
- Microbial Genomics and Ecology, Center for the Planetary Health and Innovation Science (PHIS), The IDEC Institute, Hiroshima University, Hiroshima, 739-0046 Japan
- Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Hiroshima, 739-0046 Japan
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20
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Jeong SB, Shin JH, Kim SW, Seo SC, Jung JH. Performance evaluation of an electrostatic precipitator with a copper plate using an aerosolized SARS-CoV-2 surrogate (bacteriophage phi 6). ENVIRONMENTAL TECHNOLOGY & INNOVATION 2023; 30:103124. [PMID: 36987524 PMCID: PMC10035800 DOI: 10.1016/j.eti.2023.103124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Revised: 01/29/2023] [Accepted: 03/21/2023] [Indexed: 06/19/2023]
Abstract
The global spread of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has reminded us of the importance of developing technologies to reduce and control bioaerosols in built environments. For bioaerosol control, the interaction between researchers and biomaterials is essential, and considering the characteristics of target pathogens is strongly required. Herein, we used enveloped viral aerosols, bacteriophage phi 6, for evaluating the performance of an electrostatic precipitator (ESP) with a copper-collecting plate (Cu-plate). In particular, bacteriophage phi 6 is an accessible enveloped virus that can be operated in biosafety level (BSL)-1 as a promising surrogate for SARS-CoV-2 with structural and morphological similarities. ESP with Cu-plate showed >91% of particle removal efficiency for viral aerosols at 77 cm/s of airflow face velocity. Moreover, the Cu-plate presented a potent antiviral performance of 5.4-relative log reduction within <15 min of contact. We believe that the evaluation of ESP performance using an aerosolized enveloped virus and plaque assay is invaluable. Our results provide essential information for the development of bioaerosol control technologies that will lead the post-corona era.
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Affiliation(s)
- Sang Bin Jeong
- Department of Mechanical Engineering, Sejong University, Seoul 05006, Republic of Korea
| | - Jae Hak Shin
- Department of Mechanical Engineering, Sejong University, Seoul 05006, Republic of Korea
| | - Sam Woong Kim
- Agri-Food Bio Convergence Institute, Gyeongsang National University, Jinju 52725, Republic of Korea
| | - Sung Chul Seo
- Department of Nano, Chemical and Biological Engineering, Seokyeong University, Seoul 02713, Republic of Korea
| | - Jae Hee Jung
- Department of Mechanical Engineering, Sejong University, Seoul 05006, Republic of Korea
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21
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Métris KL, Métris J. Aircraft surveys for air eDNA: probing biodiversity in the sky. PeerJ 2023; 11:e15171. [PMID: 37077310 PMCID: PMC10108859 DOI: 10.7717/peerj.15171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 03/13/2023] [Indexed: 04/21/2023] Open
Abstract
Air is a medium for dispersal of environmental DNA (eDNA) carried in bioaerosols, yet the atmosphere is mostly unexplored as a source of genetic material encompassing all domains of life. In this study, we designed and deployed a robust, sterilizable hardware system for airborne nucleic acid capture featuring active filtration of a quantifiable, controllable volume of air and a high-integrity chamber to protect the sample from loss or contamination. We used our hardware system on an aircraft across multiple height transects over major aerosolization sources to collect air eDNA, coupled with high-throughput amplicon sequencing using multiple DNA metabarcoding markers targeting bacteria, plants, and vertebrates to test the hypothesis of large-scale genetic presence of these bioaerosols throughout the planetary boundary layer in the lower troposphere. Here, we demonstrate that the multi-taxa DNA assemblages inventoried up to 2,500 m using our airplane-mounted hardware system are reflective of major aerosolization sources in the survey area and show previously unreported airborne species detections (i.e., Allium sativum L). We also pioneer an aerial survey flight grid standardized for atmospheric sampling of genetic material and aeroallergens using a light aircraft and limited resources. Our results show that air eDNA from terrestrial bacteria, plants, and vertebrates is detectable up to high altitude using our airborne air sampler and demonstrate the usefulness of light aircraft in monitoring campaigns. However, our work also underscores the need for improved marker choices and reference databases for species in the air column, particularly eukaryotes. Taken together, our findings reveal strong connectivity or mixing of terrestrial-associated eDNA from ground level aerosolization sources and the atmosphere, and we recommend that parameters and indices considering lifting action, atmospheric instability, and potential for convection be incorporated in future surveys for air eDNA. Overall, this work establishes a foundation for light aircraft campaigns to comprehensively and economically inventory bioaerosol emissions and impacts at scale, enabling transformative future opportunities in airborne DNA technology.
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Affiliation(s)
- Kimberly L. Métris
- Department of Genetics and Biochemistry, Clemson University, Clemson, SC, United States
- Airborne Science LLC, Clemson, SC, United States
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22
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Zhang X, Chen Y, Pan Y, Ma X, Hu G, Li S, Deng Y, Chen Z, Chen H, Wu Y, Jiang Z, Li Z. Research progress of severe acute respiratory syndrome coronavirus 2 on aerosol collection and detection. CHINESE CHEM LETT 2023:108378. [PMID: 37362323 PMCID: PMC10039702 DOI: 10.1016/j.cclet.2023.108378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 03/02/2023] [Accepted: 03/22/2023] [Indexed: 06/28/2023]
Abstract
The outbreak of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in late 2019 has negatively affected people's lives and productivity. Because the mode of transmission of SARS-CoV-2 is of great concern, this review discusses the sources of virus aerosols and possible transmission routes. First, we discuss virus aerosol collection methods, including natural sedimentation, solid impact, liquid impact, centrifugal, cyclone and electrostatic adsorption methods. Then, we review common virus aerosol detection methods, including virus culture, metabolic detection, nucleic acid-based detection and immunology-based detection methods. Finally, possible solutions for the detection of SARS-CoV-2 aerosols are introduced. Point-of-care testing has long been a focus of attention. In the near future, the development of an instrument that integrates sampling and output results will enable the real-time, automatic monitoring of patients.
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Affiliation(s)
- Xinyu Zhang
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Yuting Chen
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Yueying Pan
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Xinye Ma
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Gui Hu
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Song Li
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Yan Deng
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Zhu Chen
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Hui Chen
- Hunan Key Laboratory of Biomedical Nanomaterials and Devices, Hunan University of Technology, Zhuzhou, 412007, China
| | - Yanqi Wu
- State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Macau, 999078, China
- Shenzhen Lemniscare Med Technol Co. Ltd., Shenzhen, 518000, China
| | - Zhihong Jiang
- State Key Laboratory of Quality Research in Chinese Medicine, Macau University of Science and Technology, Macau, 999078, China
| | - Zhiyang Li
- Department of Clinical Laboratory, the Affiliated Drum Tower Hospital of Nanjing University Medical School, Nanjing, 210008, China
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23
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Basapathi Raghavendra J, Mathanlal T, Zorzano MP, Martin-Torres J. An Optimized Active Sampling Procedure for Aerobiological DNA Studies. SENSORS (BASEL, SWITZERLAND) 2023; 23:2836. [PMID: 36905039 PMCID: PMC10006969 DOI: 10.3390/s23052836] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 03/02/2023] [Accepted: 03/03/2023] [Indexed: 06/18/2023]
Abstract
The Earth's atmosphere plays a critical role in transporting and dispersing biological aerosols. Nevertheless, the amount of microbial biomass in suspension in the air is so low that it is extremely difficult to monitor the changes over time in these communities. Real-time genomic studies can provide a sensitive and rapid method for monitoring changes in the composition of bioaerosols. However, the low abundance of deoxyribose nucleic acid (DNA) and proteins in the atmosphere, which is of the order of the contamination produced by operators and instruments, poses a challenge for the sampling process and the analyte extraction. In this study, we designed an optimized, portable, closed bioaerosol sampler based on membrane filters using commercial off-the-shelf components, demonstrating its end-to-end operation. This sampler can operate autonomously outdoors for a prolonged time, capturing ambient bioaerosols and avoiding user contamination. We first performed a comparative analysis in a controlled environment to select the optimal active membrane filter based on its ability to capture and extract DNA. We have designed a bioaerosol chamber for this purpose and tested three commercial DNA extraction kits. The bioaerosol sampler was tested outdoors in a representative environment and run for 24 h at 150 L/min. Our methodology suggests that a 0.22-µm polyether sulfone (PES) membrane filter can recover up to 4 ng of DNA in this period, sufficient for genomic applications. This system, along with the robust extraction protocol, can be automated for continuous environmental monitoring to gain insights into the time evolution of microbial communities within the air.
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Affiliation(s)
| | - Thasshwin Mathanlal
- Department of Planetary Sciences, School of Geosciences, University of Aberdeen, Aberdeen AB24 3UE, UK
| | - Maria-Paz Zorzano
- Centro de Astrobiología (CSIC-INTA), Torrejon de Ardoz, 28850 Madrid, Spain
| | - Javier Martin-Torres
- Department of Planetary Sciences, School of Geosciences, University of Aberdeen, Aberdeen AB24 3UE, UK
- Instituto Andaluz de Ciencias de la Tierra (CSIC-UGR), 18100 Granada, Spain
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24
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Liu Z, Lv J, Zhang Z, Ma J, Song Y, Wu M, Cao G, Guo J. Three Experimental Common High-Risk Procedures: Emission Characteristics Identification and Source Intensity Estimation in Biosafety Laboratory. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2023; 20:4479. [PMID: 36901493 PMCID: PMC10002466 DOI: 10.3390/ijerph20054479] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 02/19/2023] [Accepted: 03/01/2023] [Indexed: 06/18/2023]
Abstract
Biosafety laboratory is an important place to study high-risk microbes. In biosafety laboratories, with the outbreak of infectious diseases such as COVID-19, experimental activities have become increasingly frequent, and the risk of exposure to bioaerosols has increased. To explore the exposure risk of biosafety laboratories, the intensity and emission characteristics of laboratory risk factors were investigated. In this study, high-risk microbe samples were substituted with Serratia marcescens as the model bacteria. The resulting concentration and particle size segregation of the bioaerosol produced by three experimental procedures (spill, injection, and sample drop) were monitored, and the emission sources' intensity were quantitatively analyzed. The results showed that the aerosol concentration produced by injection and sample drop was 103 CFU/m3, and that by sample spill was 102 CFU/m3. The particle size of bioaerosol is mainly segregated in the range of 3.3-4.7 μm. There are significant differences in the influence of risk factors on source intensity. The intensity of sample spill, injection, and sample drop source is 3.6 CFU/s, 78.2 CFU/s, and 664 CFU/s. This study could provide suggestions for risk assessment of experimental operation procedures and experimental personnel protection.
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Affiliation(s)
- Zhijian Liu
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
| | - Jiabin Lv
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
| | - Zheng Zhang
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
| | - Juntao Ma
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
| | - Yangfan Song
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
| | - Minnan Wu
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
| | - Guoqing Cao
- Institute of Building Environment and Energy, China Academy of Building Research, Beijing 100013, China
| | - Jiacheng Guo
- Department of Power Engineering, North China Electric Power University, Baoding 071003, China
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25
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Aerosolize this: Generation, collection, and analysis of aerosolized virus in laboratory settings. PLoS Pathog 2023; 19:e1011178. [PMID: 36893118 PMCID: PMC9997909 DOI: 10.1371/journal.ppat.1011178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/10/2023] Open
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26
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Efthymiopoulos S, Aktas YD, Altamirano H. Mind the gap between non-activated (non-aggressive) and activated (aggressive) indoor fungal testing: impact of pre-sampling environmental settings on indoor air readings. UCL OPEN ENVIRONMENT 2023; 5:e055. [PMID: 37229344 PMCID: PMC10208333 DOI: 10.14324/111.444/ucloe.000055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/09/2022] [Accepted: 12/21/2022] [Indexed: 05/27/2023]
Abstract
Indoor fungal testing has been within the researchers' scope of interest for more than a century. Various sampling and analysis techniques have been developed over the years, but no testing protocol has been yet standardised and widely accepted by the research and practitioner communities. The diversity in fungal taxa within buildings with varied biological properties and implications on the health and wellbeing of the occupants and the building fabric complicates the decision-making process for selecting an appropriate testing protocol. This study aims to present a critical review of non-activated and activated approaches to indoor testing, with an emphasis on the preparation of the indoor environment prior to sampling. The study demonstrates the differences in the outcomes of non-activated and activated testing through a set of laboratory experiments in idealised conditions and a case study. The findings suggest that larger particles are particularly sensitive to the sampling height and activation, and that non-activated protocols, despite dominating the current literature, can significantly underestimate the fungal biomass and species richness. Therefore, this paper calls for better-defined and activated protocols that can enhance robustness and reproducibility across the research domain focused on indoor fungal testing.
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Affiliation(s)
- Spyros Efthymiopoulos
- Department of Civil Environmental and Geomatic Engineering (CEGE), University College London, London, UK
- UK Centre for Moisture in Buildings (UKCMB), London, UK
| | - Yasemin D. Aktas
- Department of Civil Environmental and Geomatic Engineering (CEGE), University College London, London, UK
- UK Centre for Moisture in Buildings (UKCMB), London, UK
| | - Hector Altamirano
- UK Centre for Moisture in Buildings (UKCMB), London, UK
- Institute of Environmental Design and Engineering (IEDE), UCL, London, UK
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27
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Cox J, Christensen B, Burton N, Dunn KH, Finnegan M, Ruess A, Estill C. Transmission of SARS-CoV-2 in the workplace: Key findings from a rapid review of the literature. AEROSOL SCIENCE AND TECHNOLOGY : THE JOURNAL OF THE AMERICAN ASSOCIATION FOR AEROSOL RESEARCH 2023; 57:233-254. [PMID: 37213938 PMCID: PMC10193509 DOI: 10.1080/02786826.2023.2166394] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Accepted: 12/27/2022] [Indexed: 05/23/2023]
Abstract
At the beginning of the COVID-19 pandemic, the primary route of transmission of the SARS-CoV-2 virus was not well understood. Research gathered from other respiratory infectious diseases, including other coronaviruses, was the basis for the initial perceptions for transmission of SARS-CoV-2. To better understand transmission of SARS-CoV-2, a rapid literature review was conducted from literature generated March 19, 2020, through September 23, 2021. 18,616 unique results were identified from literature databases and screened. Of these, 279 key articles were reviewed and abstracted covering critical topics such as environmental/workplace monitoring, sampling and analytical method evaluation, and the ability of the virus to remain intact and infectious during sampling. This paper describes the results of the rapid literature review, which evaluated pathways that contribute to transmission as well as the strengths and limitations of current sampling approaches. This review also evaluates how different factors, including environmental conditions and surface characteristics, could impact the transmission potential of SARS-CoV-2. A continual rapid review in the midst of a pandemic proved particularly useful for quickly understanding the transmission parameters of the virus and enabled us to comprehensively assess literature, respond to workplace questions, and evaluate our understanding as the science evolved. Air and surface sampling with the accompanying analytical methods were not generally effective in recovering SARS-CoV-2 viable virus or RNA in many likely contaminated environments. In light of these findings, the development of validated sampling and analysis methods is critical for determining worker exposure to SARS-CoV-2 and to assess the impact of mitigation efforts.
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Affiliation(s)
- Jennie Cox
- National Institute for Occupational Safety and Health, Cincinnati, OH, USA
| | - Brian Christensen
- National Institute for Occupational Safety and Health, Cincinnati, OH, USA
| | - Nancy Burton
- National Institute for Occupational Safety and Health, Cincinnati, OH, USA
| | - Kevin H. Dunn
- National Institute for Occupational Safety and Health, Cincinnati, OH, USA
| | | | - Ana Ruess
- Gryphon Scientific, Takoma Park, MD, USA
| | - Cherie Estill
- National Institute for Occupational Safety and Health, Cincinnati, OH, USA
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28
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Lee I, Jeon E, Lee J. On-site bioaerosol sampling and detection in microfluidic platforms. Trends Analyt Chem 2023; 158:116880. [PMID: 36514783 PMCID: PMC9731818 DOI: 10.1016/j.trac.2022.116880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Revised: 12/07/2022] [Accepted: 12/07/2022] [Indexed: 12/13/2022]
Abstract
As the recent coronavirus disease (COVID-19) pandemic and several severe illnesses such as Middle East respiratory syndrome coronavirus (MERS-CoV), Influenza A virus (IAV) flu, and severe acute respiratory syndrome (SARS) have been found to be airborne, the importance of monitoring bioaerosols for the control and prevention of airborne epidemic diseases outbreaks is increasing. However, current aerosol collection and detection technologies may be limited to on-field use for real-time monitoring because of the relatively low concentrations of targeted bioaerosols in air samples. Microfluidic devices have been used as lab-on-a-chip platforms and exhibit outstanding capabilities in airborne particulate collection, sample processing, and target molecule analysis, thereby highlighting their potential for on-site bioaerosol monitoring. This review discusses the measurement of airborne microorganisms from air samples, including sources and transmission of bioaerosols, sampling strategies, and analytical methodologies. Recent advancements in microfluidic platforms have focused on bioaerosol sample preparation strategies, such as sorting, concentrating, and extracting, as well as rapid and field-deployable detection methods for analytes on microfluidic chips. Furthermore, we discuss an integrated platform for on-site bioaerosol analyses. We believe that our review significantly contributes to the literature as it assists in bridging the knowledge gaps in bioaerosol monitoring using microfluidic platforms.
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Affiliation(s)
- Inae Lee
- Department of Chemistry, Hanyang University, Seoul, 04763, South Korea.,Research Institute for Convergence of Basic Sciences, Hanyang University, 222 Wangsimni-Ro, Seongdong-Gu, Seoul, 04763, South Korea
| | - Eunyoung Jeon
- Department of Chemistry, Hanyang University, Seoul, 04763, South Korea
| | - Joonseok Lee
- Department of Chemistry, Hanyang University, Seoul, 04763, South Korea.,Research Institute for Convergence of Basic Sciences, Hanyang University, 222 Wangsimni-Ro, Seongdong-Gu, Seoul, 04763, South Korea.,Research Institute for Natural Sciences, Hanyang University, Seoul, 04763, South Korea
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29
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Pertegal V, Lacasa E, Cañizares P, Rodrigo MA, Sáez C. Understanding the influence of the bioaerosol source on the distribution of airborne bacteria in hospital indoor air. ENVIRONMENTAL RESEARCH 2023; 216:114458. [PMID: 36181895 DOI: 10.1016/j.envres.2022.114458] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Revised: 09/22/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
Abstract
The composition and concentration of airborne microorganisms in hospital indoor air has been reported to contain airborne bacteria and fungi concentrations ranged 101-103 CFU/m3 in inpatients facilities which mostly exceed recommendations from the World Health Organization (WHO). In this work, a deeper knowledge of the performance of airborne microorganisms would allow improving the designs of the air-conditioning installations to restrict hospital-acquired infections (HAIs). A solution containing Escherichia coli (E. coli) as a model of airborne bacteria was nebulized using the Collison nebulizer to simulate bioaerosols in various hospital areas such as patients' rooms or bathrooms. Results showed that the bioaerosol source had a significant influence on the airborne bacteria concentrations since 4.00 102, 6.84 103 and 1.39 104 CFU mL-1 were monitored during the aerosolization for 10 min of urine, saliva and urban wastewater, respectively. These results may be explained considering the quite narrow distribution profile of drop sizes around 1.10-1.29 μm obtained for urban wastewater, with much vaster distribution profiles during the aerosolization of urine or saliva. The airborne bacteria concentration may increase up to 107 CFU mL-1 for longer sampling times and higher aerosolization pressures, causing several cell damages. The cell membrane damage index (ID) can vary from 0 to 1, depending on the genomic DNA releases from bacteria. In fact, the ID of E. coli was more than two times higher (0.33 vs. 0.72) when increasing the pressure of air flow was applied from 1 to 2 bar. Finally, the ventilation air flow also affected the distribution of bioaerosols due to its direct relationship with the relative humidity of indoor air. Specifically, the airborne bacteria concentration diminished almost below 3-logs by applying more than 10 L min-1 during the aerosolization of urine due to their inactivation by an increase in their osmotic pressure.
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Affiliation(s)
- Víctor Pertegal
- Department of Chemical Engineering, Higher Technical School of Industrial Engineering, University of Castilla-La Mancha, Edificio Infante Don Juan Manuel, Campus Universitario S/n, 02071, Albacete, Spain
| | - Engracia Lacasa
- Department of Chemical Engineering, Higher Technical School of Industrial Engineering, University of Castilla-La Mancha, Edificio Infante Don Juan Manuel, Campus Universitario S/n, 02071, Albacete, Spain.
| | - Pablo Cañizares
- Department of Chemical Engineering, Faculty of Chemical Sciences and Technologies, University of Castilla-La Mancha, Edificio Enrique Costa Novella, Campus Universitario S/n, 13005, Ciudad Real, Spain
| | - Manuel A Rodrigo
- Department of Chemical Engineering, Faculty of Chemical Sciences and Technologies, University of Castilla-La Mancha, Edificio Enrique Costa Novella, Campus Universitario S/n, 13005, Ciudad Real, Spain
| | - Cristina Sáez
- Department of Chemical Engineering, Faculty of Chemical Sciences and Technologies, University of Castilla-La Mancha, Edificio Enrique Costa Novella, Campus Universitario S/n, 13005, Ciudad Real, Spain.
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30
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Mahaffee WF, Margairaz F, Ulmer L, Bailey BN, Stoll R. Catching Spores: Linking Epidemiology, Pathogen Biology, and Physics to Ground-Based Airborne Inoculum Monitoring. PLANT DISEASE 2023; 107:13-33. [PMID: 35679849 DOI: 10.1094/pdis-11-21-2570-fe] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Monitoring airborne inoculum is gaining interest as a potential means of giving growers an earlier warning of disease risk in a management unit or region. This information is sought by growers to aid in adapting to changes in the management tools at their disposal and the market-driven need to reduce the use of fungicides and cost of production. To effectively use inoculum monitoring as a decision aid, there is an increasing need to understand the physics of particle transport in managed and natural plant canopies to effectively deploy and use near-ground aerial inoculum data. This understanding, combined with the nuances of pathogen-specific biology and disease epidemiology, can serve as a guide to designing improved monitoring approaches. The complexity of any pathosystem and local environment are such that there is not a generalized approach to near-ground air sampler placement, but there is a conceptual framework to arrive at a "semi-optimal" solution based on available resources. This review is intended as a brief synopsis of the linkages among pathogen biology, disease epidemiology, and the physics of the aerial dispersion of pathogen inoculum and what to consider when deciding where to locate ground-based air samplers. We leverage prior work in developing airborne monitoring tools for hops, grapes, spinach, and turf, and research into the fluid mechanics governing particle transport in sparse canopies and urban and forest environments. We present simulation studies to demonstrate how particles move in the complex environments of agricultural fields and to illustrate the limited sampling area of common air samplers.
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Affiliation(s)
- Walter F Mahaffee
- United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Corvallis, OR 97330
| | - Fabien Margairaz
- Department of Mechanical Engineering, University of Utah, Salt Lake City, UT 84112
| | - Lucas Ulmer
- Department of Mechanical Engineering, University of Utah, Salt Lake City, UT 84112
| | - Brian N Bailey
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616
| | - Rob Stoll
- Department of Mechanical Engineering, University of Utah, Salt Lake City, UT 84112
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31
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Identification of microbial airborne contamination routes in a food production environment and development of a tailored protection concept using computational fluid dynamics (CFD) simulation. J FOOD ENG 2022. [DOI: 10.1016/j.jfoodeng.2022.111157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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32
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Li J, Zuraimi S, Schiavon S, Wan MP, Xiong J, Tham KW. Diurnal trends of indoor and outdoor fluorescent biological aerosol particles in a tropical urban area. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 848:157811. [PMID: 35931158 DOI: 10.1016/j.scitotenv.2022.157811] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2022] [Revised: 07/20/2022] [Accepted: 07/31/2022] [Indexed: 06/15/2023]
Abstract
We evaluated diurnal trends of size-resolved indoor and outdoor fluorescent biological airborne particles (FBAPs) and their contributions to particulate matter (PM) within 0.5-20 μm. After a ten-week continuous sampling via two identical wideband integrated bioaerosol sensors, we found that both indoor and outdoor diurnal trends of PM were driven by its bioaerosol component. Outdoors, the median [interquartile range] FBAP mass concentration peaked at 8.2 [5.8-9.9] μg/m3 around sunrise and showed a downtrend from 6:00 to 18:00 during the daytime and an uptrend during the night. The nighttime FBAP level was 1.8 [1.4-2.2] times higher than that during the daytime, and FBAPs accounted for 45 % and 56 % of PM during daytime and nighttime, respectively. Indoors, the rise in concentrations of FBAPs smaller than 1 μm coincided with the starting operation of the heating, ventilation, and air conditioning (HVAC) system at 6:00, and the concentration peaked at 8:00 and dropped to the daily average by noontime. This indicated that the starting operation of the HVAC system dislodged the overnight settled and accumulated fine bioaerosols into the indoor environment. For particles larger than 1 μm, the variation of mass concentration was driven by occupancy. Based on regression modeling, the contributions of indoor PM, non-FBAP, and FBAP sources to indoor mass concentrations were estimated to be 93 %, 67 %, and 97 % during the occupied period.
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Affiliation(s)
- Jiayu Li
- Berkeley Education Alliance for Research in Singapore (BEARS), 1 Create Way, 138602, Singapore.
| | - Sultan Zuraimi
- Berkeley Education Alliance for Research in Singapore (BEARS), 1 Create Way, 138602, Singapore
| | - Stefano Schiavon
- Center for the Built Environment (CBE), UC Berkeley, 390 Wurster Hall, Berkeley, CA 94720, USA
| | - Man Pun Wan
- School of Mechanical and Aerospace Engineering, Nanyang Technological University, 50 Nanyang Ave, 639798, Singapore
| | - Jinwen Xiong
- School of Mechanical and Aerospace Engineering, Nanyang Technological University, 50 Nanyang Ave, 639798, Singapore
| | - Kwok Wai Tham
- Department of Building, National University of Singapore, 4 Architecture Drive, 117566, Singapore
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Regan DP, Fong C, Bond ACS, Desjardins C, Hardcastle J, Hung SH, Holmes AP, Schiffman JD, Maginnis MS, Howell C. Improved Recovery of Captured Airborne Bacteria and Viruses with Liquid-Coated Air Filters. ACS APPLIED MATERIALS & INTERFACES 2022; 14:50543-50556. [PMID: 36331290 PMCID: PMC10028737 DOI: 10.1021/acsami.2c14754] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The COVID-19 pandemic has revealed the importance of the detection of airborne pathogens. Here, we present composite air filters featuring a bioinspired liquid coating that facilitates the removal of captured aerosolized bacteria and viruses for further analysis. We tested three types of air filters: commercial polytetrafluoroethylene (PTFE), which is well known for creating stable liquid coatings, commercial high-efficiency particulate air (HEPA) filters, which are widely used, and in-house-manufactured cellulose nanofiber mats (CNFMs), which are made from sustainable materials. All filters were coated with omniphobic fluorinated liquid to maximize the release of pathogens. We found that coating both the PTFE and HEPA filters with liquid improved the rate at which Escherichia coli was recovered using a physical removal process compared to uncoated controls. Notably, the coated HEPA filters also increased the total number of recovered cells by 57%. Coating the CNFM filters did not improve either the rate of release or the total number of captured cells. The most promising materials, the liquid-coated HEPA, filters were then evaluated for their ability to facilitate the removal of pathogenic viruses via a chemical removal process. Recovery of infectious JC polyomavirus, a nonenveloped virus that attacks the central nervous system, was increased by 92% over uncoated controls; however, there was no significant difference in the total amount of genomic material recovered compared to that of controls. In contrast, significantly more genomic material was recovered for SARS-CoV-2, the airborne, enveloped virus, which causes COVID-19, from liquid-coated filters. Although the amount of infectious SARS-CoV-2 recovered was 58% higher, these results were not significantly different from uncoated filters due to high variability. These results suggest that the efficient recovery of airborne pathogens from liquid-coated filters could improve air sampling efforts, enhancing biosurveillance and global pathogen early warning.
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Affiliation(s)
- Daniel P Regan
- Department of Chemical and Biomedical Engineering, University of Maine, 5737 Jenness Hall, Orono, Maine04469, United States
- Graduate School of Biomedical Science and Engineering, University of Maine, 42 Stodder Hall, Orono, Maine04469, United States
| | - ChunKi Fong
- Graduate School of Biomedical Science and Engineering, University of Maine, 42 Stodder Hall, Orono, Maine04469, United States
| | - Avery C S Bond
- Department of Molecular and Biomedical Sciences, University of Maine, 320 Hitchner Hall, Orono, Maine04469, United States
| | - Claudia Desjardins
- Department of Molecular and Biomedical Sciences, University of Maine, 320 Hitchner Hall, Orono, Maine04469, United States
| | - Justin Hardcastle
- Graduate School of Biomedical Science and Engineering, University of Maine, 42 Stodder Hall, Orono, Maine04469, United States
| | - Shao-Hsiang Hung
- Department of Chemical Engineering, University of Massachusetts Amherst, Amherst, Massachusetts01003-9303, United States
| | - Andrew P Holmes
- Cooperative Extension, University of Maine, 17 Godfrey Drive, Orono, Maine04473, United States
| | - Jessica D Schiffman
- Department of Chemical Engineering, University of Massachusetts Amherst, Amherst, Massachusetts01003-9303, United States
| | - Melissa S Maginnis
- Graduate School of Biomedical Science and Engineering, University of Maine, 42 Stodder Hall, Orono, Maine04469, United States
- Department of Molecular and Biomedical Sciences, University of Maine, 320 Hitchner Hall, Orono, Maine04469, United States
| | - Caitlin Howell
- Department of Chemical and Biomedical Engineering, University of Maine, 5737 Jenness Hall, Orono, Maine04469, United States
- Graduate School of Biomedical Science and Engineering, University of Maine, 42 Stodder Hall, Orono, Maine04469, United States
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Yu L. Real-time monitoring of air pathogens in the ICU with biosensors and robots. Crit Care 2022; 26:353. [PMCID: PMC9662127 DOI: 10.1186/s13054-022-04222-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Accepted: 10/28/2022] [Indexed: 11/16/2022] Open
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Tian J, Yan C, Alcega SG, Hassard F, Tyrrel S, Coulon F, Nasir ZA. Detection and characterization of bioaerosol emissions from wastewater treatment plants: Challenges and opportunities. Front Microbiol 2022; 13:958514. [PMID: 36439798 PMCID: PMC9684734 DOI: 10.3389/fmicb.2022.958514] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 10/11/2022] [Indexed: 09/04/2023] Open
Abstract
Rapid population growth and urbanization process have led to increasing demand for wastewater treatment capacity resulting in a non-negligible increase of wastewater treatment plants (WWTPs) in several cities around the world. Bioaerosol emissions from WWTPs may pose adverse health risks to the sewage workers and nearby residents, which raises increasing public health concerns. However, there are still significant knowledge gaps on the interplay between process-based bioaerosol characteristics and exposures and the quantification of health risk which limit our ability to design effective risk assessment and management strategies. This review provides a critical overview of the existing knowledge of bioaerosol emissions from WWTPs including their nature, magnitude and size distribution, and highlights the shortcoming associated with existing sampling and analysis methods. The recent advancements made for rapid detection of bioaerosols are then discussed, especially the emerging real time detection methods to highlight the directions for future research needs to advance the knowledge on bioaerosol emissions from WWTPs.
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Affiliation(s)
- Jianghan Tian
- School of Chemistry, University of Bristol, Bristol, United Kingdom
| | - Cheng Yan
- School of Water, Energy and Environment, Cranfield University, Cranfield, United Kingdom
- School of Environmental Studies, China University of Geosciences, Wuhan, China
| | - Sonia Garcia Alcega
- School of Physical Sciences, The Open University, Walton Hall, Milton Keynes, United Kingdom
| | - Francis Hassard
- School of Water, Energy and Environment, Cranfield University, Cranfield, United Kingdom
- Institute for Nanotechnology and Water Sustainability, University of South Africa, Johannesburg, South Africa
| | - Sean Tyrrel
- School of Water, Energy and Environment, Cranfield University, Cranfield, United Kingdom
| | - Frederic Coulon
- School of Water, Energy and Environment, Cranfield University, Cranfield, United Kingdom
| | - Zaheer Ahmad Nasir
- School of Water, Energy and Environment, Cranfield University, Cranfield, United Kingdom
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Semeraro S, Gaetano AS, Zupin L, Poloni C, Merlach E, Greco E, Licen S, Fontana F, Leo S, Miani A, Broccolo F, Barbieri P. Operative Protocol for Testing the Efficacy of Nasal Filters in Preventing Airborne Transmission of SARS-CoV-2. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:13790. [PMID: 36360670 PMCID: PMC9654745 DOI: 10.3390/ijerph192113790] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Revised: 10/18/2022] [Accepted: 10/19/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND Standardized methods for testing Viral Filtration Efficiency (VFE) of tissues and devices are lacking and few studies are available on aerosolizing, sampling and assessing infectivity of SARS-CoV-2 in controlled laboratory settings. NanoAg-coated endonasal filters appear a promising aid for lowering viable virus inhalation in both adult and younger populations (e.g., adolescents). OBJECTIVE to provide an adequate method for testing SARS-CoV-2 bioaerosol VFE of bio-gel Ag nanoparticles endonasal filters, by a model system, assessing residual infectivity as cytopathic effect and viral proliferation on in vitro cell cultures. METHODS A SARS-CoV-2 aerosol transmission chamber fed by a BLAM aerosol generator produces challenges (from very high viral loads (105 PFU/mL) to lower ones) for endonasal filters positioned in a Y shape sampling port connected to a Biosampler. An aerosol generator, chamber and sampler are contained in a class II cabinet in a BSL3 facility. Residual infectivity is assessed from aliquots of liquid collecting bioaerosol, sampled without and with endonasal filters. Cytopathic effect as plaque formation and viral proliferation assessed by qRT-PCR on Vero E6 cells are determined up to 7 days post inoculum. RESULTS Each experimental setting is replicated three times and basic statistics are calculated. Efficiency of aerosolization is determined as difference between viral load in the nebulizer and in the Biosampler at the first day of experiment. Efficiency of virus filtration is calculated as RNA viral load ratio in collected bioaerosol with and without endonasal filters at the day of the experiment. Presence of infectious virus is assessed by plaque forming unit assay and RNA viral load variations. CONCLUSIONS A procedure and apparatus for assessing SARS-CoV-2 VFE for endonasal filters is proposed. The apparatus can be implemented for more sophisticated studies on contaminated aerosols.
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Affiliation(s)
- Sabrina Semeraro
- INSTM National Interuniversity Consortium of Materials Science and Technology, Research Unit of University of Trieste, 34127 Trieste, Italy
| | - Anastasia Serena Gaetano
- INSTM National Interuniversity Consortium of Materials Science and Technology, Research Unit of University of Trieste, 34127 Trieste, Italy
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Luisa Zupin
- Institute for Maternal and Child Health, IRCCS Burlo Garofolo, Via dell’Istria 65/1, 34137 Trieste, Italy
| | - Carlo Poloni
- INSTM National Interuniversity Consortium of Materials Science and Technology, Research Unit of University of Trieste, 34127 Trieste, Italy
- Department of Engineering and Architecture, University of Trieste, Via A. Valerio 10, 34127 Trieste, Italy
| | - Elvio Merlach
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Enrico Greco
- INSTM National Interuniversity Consortium of Materials Science and Technology, Research Unit of University of Trieste, 34127 Trieste, Italy
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
- SIMA Società Italiana di Medicina Ambientale, Viale di Porta Vercellina, 9, 20123 Milano, Italy
| | - Sabina Licen
- INSTM National Interuniversity Consortium of Materials Science and Technology, Research Unit of University of Trieste, 34127 Trieste, Italy
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
| | - Francesco Fontana
- Ospedale San Polo, Azienda Sanitaria Universitaria Giuliano Isontina, Via Luigi Galvani 1, 34074 Monfalcone, Italy
| | - Silvana Leo
- Division of Oncology, Vito Fazzi Hospital, P.za Muratore 1, 73100 Lecce, Italy
| | - Alessandro Miani
- SIMA Società Italiana di Medicina Ambientale, Viale di Porta Vercellina, 9, 20123 Milano, Italy
- Department of Environmental Science and Policy, University of Milan, Via Festa del Perdono 7, 20122 Milano, Italy
| | - Francesco Broccolo
- SIMA Società Italiana di Medicina Ambientale, Viale di Porta Vercellina, 9, 20123 Milano, Italy
- Department of Medicine and Surgery, School of Medicine, University of Milano-Bicocca, 20900 Monza, Italy
- Cerba HealthCare Italia, Via Durini, 14, 20122 Milano, Italy
| | - Pierluigi Barbieri
- INSTM National Interuniversity Consortium of Materials Science and Technology, Research Unit of University of Trieste, 34127 Trieste, Italy
- Department of Chemical and Pharmaceutical Sciences, University of Trieste, Via L. Giorgieri 1, 34127 Trieste, Italy
- SIMA Società Italiana di Medicina Ambientale, Viale di Porta Vercellina, 9, 20123 Milano, Italy
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Chow JC, Watson JG, Wang X, Abbasi B, Reed WR, Parks D. Review of Filters for Air Sampling and Chemical Analysis in Mining Workplaces. MINERALS (BASEL, SWITZERLAND) 2022; 12:10.3390/min12101314. [PMID: 37180428 PMCID: PMC10174218 DOI: 10.3390/min12101314] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
This review considers the use of filters to sample air in mining workplace environments for dust concentration measurement and subsequent analysis of hazardous contaminants, especially respirable crystalline silica (RCS) on filters compatible with wearable personal dust monitors (PDM). The review summarizes filter vendors, sizes, costs, chemical and physical properties, and information available on filter modeling, laboratory testing, and field performance. Filter media testing and selection should consider the characteristics required for mass by gravimetry in addition to RCS quantification by Fourier-transform infrared (FTIR) or Raman spectroscopic analysis. For mass determination, the filters need to have high filtration efficiency (≥99% for the most penetrable particle sizes) and a reasonable pressure drop (up to 16.7 kPa) to accommodate high dust loading. Additional requirements include: negligible uptake of water vapor and gaseous volatile compounds; adequate particle adhesion as a function of particle loading; sufficient particle loading capacity to form a stable particle deposit layer during sampling in wet and dusty environments; mechanical strength to withstand vibrations and pressure drops across the filter; and appropriate filter mass compatible with the tapered element oscillating microbalance. FTIR and Raman measurements require filters to be free of spectral interference. Furthermore, because the irradiated area does not completely cover the sample deposit, particles should be uniformly deposited on the filter.
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Affiliation(s)
- Judith C. Chow
- Division of Atmospheric Sciences, Desert Research Institute, Reno, NV 89511, USA
- Correspondence:
| | - John G. Watson
- Division of Atmospheric Sciences, Desert Research Institute, Reno, NV 89511, USA
| | - Xiaoliang Wang
- Division of Atmospheric Sciences, Desert Research Institute, Reno, NV 89511, USA
| | - Behrooz Abbasi
- Department of Mining and Metallurgical Engineering, University of Nevada, Reno, NV 89557, USA
| | - Wm. Randolph Reed
- Office of the Director, National Institute for Occupational Safety and Health, Pittsburgh, PA 15236, USA
| | - David Parks
- Spokane Mining Research Division, National Institute for Occupational Safety and Health, Spokane, WA 99207, USA
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Grogan SN, Han TT, Mainelis G. Development and initial testing of an active low-power, ferroelectric film-based bioaerosol sampler. AEROSOL SCIENCE AND TECHNOLOGY : THE JOURNAL OF THE AMERICAN ASSOCIATION FOR AEROSOL RESEARCH 2022; 56:1132-1145. [PMID: 37168518 PMCID: PMC10168024 DOI: 10.1080/02786826.2022.2128985] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Accepted: 09/15/2022] [Indexed: 05/13/2023]
Abstract
This article introduces REAS (Rutgers Electrostatic Active Sampler), a new active bioaerosol sampler using permanently polarized ferroelectric film (e.g., PVDF) to capture charge-carrying bioaerosol particles. While REAS operates on an electrostatic collection principle, due to its unique materials and design, it does not require external power to charge incoming particles or to create an electrostatic collection field. The sampler consists of a polarized film wound in a spiral configuration with oppositely polarized film sides positioned 2.25 mm apart. The film and its holder are inserted into a 3D-printed housing cylinder to connect to a pump. The device has an open channel design, creating virtually no pressure drop, which allows for longer sampling times on the same battery charge compared to filter samplers. When REAS was tested in different field environments, the physical collection efficiency ranged from 19 ± 2% in a laboratory environment at 1 L/min to 41 ± 0.1% in residence at 0.1 L/min. When REAS was used to capture culturable bacteria and fungi over a 24-hr period, the concentrations determined by REAS were not different from those determined by an Institute of Medicine sampler (IOM, SKC, Inc.). The concentrations determined by both samplers were lower than those measured by a SAS Super 180 Sampler (SAS, Bioscience International), except for outdoor fungi. However, the SAS was used as a grab sampler to avoid overloading or desiccating the plates, while both REAS and IOM continuously sampled for 24 hrs. Further studies will explore improvements to the REAS sample elution protocols.
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Affiliation(s)
- Sydonia N.C.M. Grogan
- Department of Environmental Sciences, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA
- Current affiliation: Population Health Sciences, School of Public Health, Georgia State University, Atlanta, Georgia, USA
| | - Taewon T. Han
- Department of Environmental Sciences, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA
| | - Gediminas Mainelis
- Department of Environmental Sciences, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA
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Development of aptamers for rapid airborne bacteria detection. Anal Bioanal Chem 2022; 414:7763-7771. [PMID: 36071267 DOI: 10.1007/s00216-022-04308-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 08/11/2022] [Accepted: 08/27/2022] [Indexed: 11/01/2022]
Abstract
Airborne microbes can rapidly spread and cause various infectious diseases worldwide. This necessitates the determination of a fast and highly sensitive detection method. There have been no studies on receptors targeting Citrobacter braakii (C. braakii), a pathogenic bacterium which can exist in the air. In this study, we rapidly isolate an aptamer, a nucleic acid molecule that can specifically bind to C. braakii by centrifugation-based partitioning method (CBPM) reported previously by our groups as omitting the repeated rounds of binding incubation, separation, and amplification that are indispensable for SELEX. The binding affinity and specificity of isolated aptamers are checked using bacteria in liquid culture and recollection solution from aerosolized bacteria. Recollection solutions of the recovered bacteria are obtained by nebulizing, drying, and recapturing with a biosampler. The CB-5 aptamer shows high affinity and specificity for C. braakii (Kd: 16.42 in liquid culture and 26.91 nM in recollection from aerosolized sample). Our results indicate the current protocol can be employed for the rapid development of reliable diagnostic receptors targeting airborne bacteria.
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Rajaei Ramsheh M, Mahdi Doroodmand M. Novel analytical method based on Fourier Transform assisted Ultraviolet-Infrared dual resonance spectroscopy for aerosol speciation. Microchem J 2022. [DOI: 10.1016/j.microc.2022.107477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Shen H, Han M, Shen Y, Shuai D. Electrospun Nanofibrous Membranes for Controlling Airborne Viruses: Present Status, Standardization of Aerosol Filtration Tests, and Future Development. ACS ENVIRONMENTAL AU 2022; 2:290-309. [PMID: 35928556 PMCID: PMC9342653 DOI: 10.1021/acsenvironau.1c00047] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The global COVID-19 pandemic has raised great public concern about the airborne transmission of viral pathogens. Virus-laden aerosols with small size could be suspended in the air for a long duration and remain infectious. Among a series of measures implemented to mitigate the airborne spread of infectious diseases, filtration by face masks, respirators, and air filters is a potent nonpharmacologic intervention. Compared with conventional air filtration media, nanofibrous membranes fabricated via electrospinning are promising candidates for controlling airborne viruses due to their desired characteristics, i.e., a reduced pore size (submicrometers to several micrometers), a larger specific surface area and porosity, and retained surface and volume charges. So far, a wide variety of electrospun nanofibrous membranes have been developed for aerosol filtration, and they have shown excellent filtration performance. However, current studies using electrospinning for controlling airborne viruses vary significantly in the practice of aerosol filtration tests, including setup configurations and operations. The discrepancy among various studies makes it difficult, if not impossible, to compare filtration performance. Therefore, there is a pressing need to establish a standardized protocol for evaluating the electrospun nanofibrous membranes' performance for removing viral aerosols. In this perspective, we first reviewed the properties and performance of diverse filter media, including electrospun nanofibrous membranes, for removing viral aerosols. Next, aerosol filtration protocols for electrospun nanofibrous membranes were discussed with respect to the aerosol generation, filtration, collection, and detection. Thereafter, standardizing the aerosol filtration test system for electrospun nanofibrous membranes was proposed. In the end, the future advancement of electrospun nanofibrous membranes for enhanced air filtration was discussed. This perspective provides a comprehensive understanding of status and challenges of electrospinning for air filtration, and it sheds light on future nanomaterial and protocol development for controlling airborne viruses, preventing the spread of infectious diseases, and beyond.
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Affiliation(s)
- Hongchen Shen
- Department
of Civil and Environmental Engineering, The George Washington University, Washington, DC 20052, United States
| | - Minghao Han
- Department
of Chemical and Environmental Engineering, University of California, Riverside, Riverside, California 92521, United States
| | - Yun Shen
- Department
of Chemical and Environmental Engineering, University of California, Riverside, Riverside, California 92521, United States
| | - Danmeng Shuai
- Department
of Civil and Environmental Engineering, The George Washington University, Washington, DC 20052, United States
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Kormos D, Lin K, Pruden A, Marr LC. Critical review of antibiotic resistance genes in the atmosphere. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2022; 24:870-883. [PMID: 35638569 DOI: 10.1039/d2em00091a] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
We conducted a critical review to establish what is known about the sources, characteristics, and dissemination of ARGs in the atmosphere. We identified 52 papers that reported direct measurements of bacterial ARGs in air samples and met other inclusion criteria. The settings of the studies fell into the following categories: urban, rural, hospital, industrial, wastewater treatment plants (WWTPs), composting and landfill sites, and indoor environments. Certain genes were commonly studied and generally abundant: sul1, intI1, β-lactam ARGs, and tetracycline ARGs. Abundances of total ARGs varied by season and setting, with air in urban areas having higher ARG abundance than rural areas during the summer and vice versa during the winter. There was greater consistency in the types and abundances of ARGs throughout the seasons in urban areas. Human activity within indoor environments was also linked to increased ARG content (abundance, diversity, and concentration) in the air. Several studies found that human exposure to ARGs through inhalation was comparable to exposure through drinking water or ingesting soil. Detection of ARGs in air is a developing field, and differences in sampling and analysis methods reflect the many possible approaches to studying ARGs in air and make direct comparisons between studies difficult. Methodologies need to be standardized to facilitate identification of the dominant ARGs in the air, determine their major sources, and quantify the role of atmospheric transport in dissemination of ARGs in the environment. With such knowledge we can develop better policies and guidelines to limit the spread of antimicrobial resistance.
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Affiliation(s)
- David Kormos
- Civil and Environmental Engineering, Virginia Tech, Blacksburg, VA, USA.
| | - Kaisen Lin
- Civil and Environmental Engineering, Virginia Tech, Blacksburg, VA, USA.
| | - Amy Pruden
- Civil and Environmental Engineering, Virginia Tech, Blacksburg, VA, USA.
| | - Linsey C Marr
- Civil and Environmental Engineering, Virginia Tech, Blacksburg, VA, USA.
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Manibusan S, Mainelis G. Passive Bioaerosol Samplers: A Complementary Tool for Bioaerosol Research. A Review. JOURNAL OF AEROSOL SCIENCE 2022; 163:105992. [PMID: 36386279 PMCID: PMC9648171 DOI: 10.1016/j.jaerosci.2022.105992] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Bioaerosols consist of airborne particles of biological origin. They play an important role in our environment and may cause negative health effects. The presence of biological aerosol is typically determined using active samplers. While passive bioaerosol samplers are used much less frequently in bioaerosol investigations, they offer certain advantages, such as simple design, low cost, and long sampling duration. This review discusses different types of passive bioaerosol samplers, including their collection mechanisms, advantages and disadvantages, applicability in different sampling environments, and available sample elution and analysis methods. Most passive samplers are based on gravitational settling and electrostatic capture mechanism or their combination. We discuss the agar settle plate, dustfall collector, Personal Aeroallergen Sampler (PAAS), and settling filters among the gravity-based samplers. The described electrostatics-based samplers include electrostatic dust cloths (EDC) and Rutgers Electrostatic Passive Sampler (REPS). In addition, the review also discusses passive opportunity samplers using preexisting airflow, such as filters in HVAC systems. Overall, passive bioaerosol sampling technologies are inexpensive, easy to operate, and can continuously sample for days and even weeks which is not easily accomplished by active sampling devices. Although passive sampling devices are usually treated as qualitative tools, they still provide information about bioaerosol presence and diversity, especially over longer time scales. Overall, this review suggests that the use of passive bioaerosol samplers alongside active collection devices can aid researchers in developing a more comprehensive understanding of biological presence and dynamics, especially over extended time scales and multiple locations.
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Affiliation(s)
| | - Gediminas Mainelis
- Corresponding author: Gediminas Mainelis, Phone: 848-932-5707, Fax: 732-932-8644
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Airborne Transmission of Foot-and-Mouth Disease Virus: A Review of Past and Present Perspectives. Viruses 2022; 14:v14051009. [PMID: 35632750 PMCID: PMC9145556 DOI: 10.3390/v14051009] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 04/25/2022] [Accepted: 05/05/2022] [Indexed: 02/01/2023] Open
Abstract
The primary transmission route for foot-and-mouth disease (FMD), a contagious viral disease of cloven-hoofed animals, is by direct contact with infected animals. Yet indirect methods of transmission, such as via the airborne route, have been shown to play an important role in the spread of the disease. Airborne transmission of FMD is referred to as a low probability- high consequence event as a specific set of factors need to coincide to facilitate airborne spread. When conditions are favourable, airborne virus may spread rapidly and cause disease beyond the imposed quarantine zones, thus complicating control measures. Therefore, it is important to understand the nature of foot-and-mouth disease virus (FMDV) within aerosols; how aerosols are generated, viral load, how far aerosols could travel and survive under different conditions. Various studies have investigated emissions from infected animals under laboratory conditions, while others have incorporated experimental data in mathematical models to predict and trace outbreaks of FMD. However, much of the existing literature focussing on FMDV in aerosols describe work which was undertaken over 40 years ago. The aim of this review is to revisit existing knowledge and investigate how modern instrumentation and modelling approaches can improve our understanding of airborne transmission of FMD.
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Anees-Hill S, Douglas P, Pashley CH, Hansell A, Marczylo EL. A systematic review of outdoor airborne fungal spore seasonality across Europe and the implications for health. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 818:151716. [PMID: 34800445 PMCID: PMC8919338 DOI: 10.1016/j.scitotenv.2021.151716] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 11/08/2021] [Accepted: 11/12/2021] [Indexed: 05/08/2023]
Abstract
Fungal spores make up a significant proportion of organic matter within the air. Allergic sensitisation to fungi is associated with conditions including allergic fungal airway disease. This systematic review analyses outdoor fungal spore seasonality across Europe and considers the implications for health. Seventy-four studies met the inclusion criteria, the majority of which (n = 64) were observational sampling studies published between 1978 and 2020. The most commonly reported genera were the known allergens Alternaria and Cladosporium, measured in 52 and 49 studies, respectively. Both displayed statistically significant increased season length in south-westerly (Mediterranean) versus north-easterly (Atlantic and Continental) regions. Although there was a trend for reduced peak or annual Alternaria and Cladosporium spore concentrations in more northernly locations, this was not statistically significant. Peak spore concentrations of Alternaria and Cladosporium exceeded clinical thresholds in nearly all locations, with median peak concentrations of 665 and 18,827 per m3, respectively. Meteorological variables, predominantly temperature, precipitation and relative humidity, were the main factors associated with fungal seasonality. Land-use was identified as another important factor, particularly proximity to agricultural and coastal areas. While correlations of increased season length or decreased annual spore concentrations with increasing average temperatures were reported in multi-decade sampling studies, the number of such studies was too small to make any definitive conclusions. Further, up-to-date studies covering underrepresented geographical regions and fungal taxa (including the use of modern molecular techniques), and the impact of land-use and climate change will help address remaining knowledge gaps. Such knowledge will help to better understand fungal allergy, develop improved fungal spore calendars and forecasts with greater geographical coverage, and promote increased awareness and management strategies for those with allergic fungal disease.
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Affiliation(s)
- Samuel Anees-Hill
- Centre for Environmental Health and Sustainability, University of Leicester, Leicester LE1 7LW, UK; The National Institute of Health Research Health Protection Research Unit in Environmental Exposures and Health, University of Leicester, Leicester LE1 7LW, UK.
| | - Philippa Douglas
- The National Institute of Health Research Health Protection Research Unit in Environmental Exposures and Health, University of Leicester, Leicester LE1 7LW, UK; Environmental Hazards and Emergencies Department, UK Health Security Agency, Harwell Campus, Chilton, Oxfordshire OX11 0RQ, UK.
| | - Catherine H Pashley
- The National Institute of Health Research Health Protection Research Unit in Environmental Exposures and Health, University of Leicester, Leicester LE1 7LW, UK; Department of Respiratory Sciences, Institute for Lung Health, University of Leicester, Leicester LE1 7RH, UK.
| | - Anna Hansell
- Centre for Environmental Health and Sustainability, University of Leicester, Leicester LE1 7LW, UK; The National Institute of Health Research Health Protection Research Unit in Environmental Exposures and Health, University of Leicester, Leicester LE1 7LW, UK.
| | - Emma L Marczylo
- The National Institute of Health Research Health Protection Research Unit in Environmental Exposures and Health, University of Leicester, Leicester LE1 7LW, UK; Toxicology Department, UK Health Security Agency, Harwell Campus, Chilton, Oxfordshire OX11 0RQ, UK.
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46
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Yeh KB, Setser B. Aerosol Test Chambers: Current State and Practice During the COVID-19 Pandemic. Front Bioeng Biotechnol 2022; 10:863954. [PMID: 35497330 PMCID: PMC9039174 DOI: 10.3389/fbioe.2022.863954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 03/25/2022] [Indexed: 11/13/2022] Open
Abstract
Respiratory infectious disease outbreaks such as those caused by coronaviruses and influenza, necessitate the use of specialized aerosol test chambers to study aspects of these causative agents including detection, efficacy of countermeasures, and aerosol survivability. The anthrax attacks from 2001 and earlier biowarfare and biodefense also influenced the study of biological aerosols to learn about how certain pathogens transmit either naturally or through artificial means. Some high containment biological laboratories, which work with Risk Group 3 and 4 agents in biosafety level -3, biosafety level-4 containment, are equipped with aerosol test chambers to enable the study of high-risk organisms in aerosolized form. Consequently, the biomedical, military and environmental sectors have specific applications when studying bioaerosols which may overlap while being different. There are countless aerosol test chambers worldwide and this number along with numerous high containment biological laboratories underscores the need for technical standards, regulatory and dual-use compliance. Here we survey common aerosol test chambers and their history, current use, and practice. Our findings reinforce the importance and need for continued collaboration among the multi-disciplinary fields studying aerobiology and biological aerosols.
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Affiliation(s)
- Kenneth B. Yeh
- MRIGlobal, Kansas City, MO, United States
- *Correspondence: Kenneth B. Yeh,
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Guo J, Zheng X, Qin T, Lv M, Zhang W, Song X, Qiu H, Hu L, Zhang L, Zhou D, Sun Y, Yang W. An experimental method for efficiently evaluating the size-resolved sampling efficiency of liquid-absorption aerosol samplers. Sci Rep 2022; 12:4745. [PMID: 35304534 PMCID: PMC8932469 DOI: 10.1038/s41598-022-08718-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Accepted: 03/11/2022] [Indexed: 11/13/2022] Open
Abstract
Aerosol samplers are critical tools for studying indoor and outdoor aerosols. Development and evaluation of samplers is often labor-intensive and time-consuming due to the need to use monodisperse aerosols spanning a range of sizes. This study develops a rapid experimental methodology using polydisperse solid aerosols to evaluate size-resolved aerosol-to-aerosol (AtoA) and aerosol-to-hydrosol (AtoH) sampling efficiencies. Arizona Test Dust (diameter 0.5–20 µm) was generated and dispersed into an aerosol test chamber and two candidate samplers were tested. For the AtoA test, aerosols upstream and downstream of a sampler were measured using an online aerodynamic particle sizer. For the AtoH test, aerosols collected in sampling medium were mixed with a reference sample and then measured by the laser diffraction method. The experimental methodology were validated as an impressive time-saving procedure, with reasonable spatial uniformity and time stability of aerosols in the test chamber and an acceptable accuracy of absolute mass quantification of collected particles. Evaluation results showed that the AGI-30 and the BioSampler sampler had similar size-resolved sampling efficiencies and that efficiencies decreased with decreasing sampling flow rate. The combined evaluation of AtoA and AtoH efficiency provided more comprehensive performance indicators than either test alone. The experimental methodology presented here can facilitate the design and choice of aerosol sampler.
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Affiliation(s)
- Jianshu Guo
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Xinying Zheng
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Tongtong Qin
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.,Laboratory Animal Center, Academy of Military Medical Science, Beijing, China
| | - Meng Lv
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Wei Zhang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Xiaolin Song
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Hongying Qiu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Lingfei Hu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Lili Zhang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Dongsheng Zhou
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China
| | - Yansong Sun
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
| | - Wenhui Yang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, 100071, China.
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Point of care diagnostics and non-invasive sampling strategy: a review on major advances in veterinary diagnostics. ACTA VET BRNO 2022. [DOI: 10.2754/avb202291010017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The use of point of care diagnostics (POCD) in animal diseases has steadily increased over the years since its introduction. Its potential application to diagnose infectious diseases in remote and resource limited settings have made it an ideal diagnostic in animal disease diagnosis and surveillance. The rapid increase in incidence of emerging infectious diseases requires urgent attention where POCD could be indispensable tools for immediate detection and early warning of a potential pathogen. The advantages of being rapid, easily affordable and the ability to diagnose an infectious disease on spot has driven an intense effort to refine and build on the existing technologies to generate advanced POCD with incremental improvements in analytical performance to diagnose a broad spectrum of animal diseases. The rural communities in developing countries are invariably affected by the burden of infectious animal diseases due to limited access to diagnostics and animal health personnel. Besides, the alarming trend of emerging and transboundary diseases with pathogen spill-overs at livestock-wildlife interfaces has been identified as a threat to the domestic population and wildlife conservation. Under such circumstances, POCD coupled with non-invasive sampling techniques could be successfully deployed at field level without the use of sophisticated laboratory infrastructures. This review illustrates the current and prospective POCD for existing and emerging animal diseases, the status of non-invasive sampling strategies for animal diseases, and the tremendous potential of POCD to uplift the status of global animal health care.
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49
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Lee G, Yoo K. A review of the emergence of antibiotic resistance in bioaerosols and its monitoring methods. RE/VIEWS IN ENVIRONMENTAL SCIENCE AND BIO/TECHNOLOGY 2022; 21:799-827. [PMID: 35694630 PMCID: PMC9169023 DOI: 10.1007/s11157-022-09622-3] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Accepted: 04/30/2022] [Indexed: 04/18/2023]
Abstract
Despite significant public health concerns regarding infectious diseases in air environments, potentially harmful microbiological indicators, such as antibiotic resistance genes (ARGs) in bioaerosols, have not received significant attention. Traditionally, bioaerosol studies have focused on the characterization of microbial communities; however, a more serious problem has recently arisen due to the presence of ARGs in bioaerosols, leading to an increased prevalence of horizontal gene transfer (HGT). This constitutes a process by which bacteria transfer genes to other environmental media and consequently cause infectious disease. Antibiotic resistance in water and soil environments has been extensively investigated in the past few years by applying advanced molecular and biotechnological methods. However, ARGs in bioaerosols have not received much attention. In addition, ARG and HGT profiling in air environments is greatly limited in field studies due to the absence of suitable methodological approaches. Therefore, this study comprehensively describes recent findings from published studies and some of the appropriate molecular and biotechnological methods for monitoring antibiotic resistance in bioaerosols. In addition, this review discusses the main knowledge gaps regarding current methodological issues and future research directions.
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Affiliation(s)
- Gihan Lee
- Department of Environmental Engineering, Korea Maritime and Ocean University, Busan, 49112 South Korea
- Interdisciplinary Major of Ocean Renewable Energy Engineering, Korea Maritime and Ocean University, Busan, 49112 South Korea
| | - Keunje Yoo
- Department of Environmental Engineering, Korea Maritime and Ocean University, Busan, 49112 South Korea
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50
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Compendium of analytical methods for sampling, characterization and quantification of bioaerosols. ADV ECOL RES 2022. [DOI: 10.1016/bs.aecr.2022.09.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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