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Dansereau G, Barros C, Poisot T. Spatially explicit predictions of food web structure from regional-level data. Philos Trans R Soc Lond B Biol Sci 2024; 379:20230166. [PMID: 39034704 PMCID: PMC11293859 DOI: 10.1098/rstb.2023.0166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Revised: 12/18/2023] [Accepted: 01/23/2024] [Indexed: 07/23/2024] Open
Abstract
Knowledge about how ecological networks vary across global scales is currently limited given the complexity of acquiring repeated spatial data for species interactions. Yet, recent developments in metawebs highlight efficient ways to first document possible interactions within regional species pools. Downscaling metawebs towards local network predictions is a promising approach to using the current data to investigate the variation of networks across space. However, issues remain in how to represent the spatial variability and uncertainty of species interactions, especially for large-scale food webs. Here, we present a probabilistic framework to downscale a metaweb based on the Canadian mammal metaweb and species occurrences from global databases. We investigated how our approach can be used to represent the variability of networks and communities between ecoregions in Canada. Species richness and interactions followed a similar latitudinal gradient across ecoregions but simultaneously identified contrasting diversity hotspots. Network motifs revealed additional areas of variation in network structure compared with species richness and number of links. Our method offers the potential to bring global predictions down to a more actionable local scale, and increases the diversity of ecological networks that can be projected in space. This article is part of the theme issue 'Connected interactions: enriching food web research by spatial and social interactions'.
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Affiliation(s)
- Gabriel Dansereau
- Département de Sciences Biologiques, Université de Montréal, Montreal, QuebecH2V 0B3, Canada
- Quebec Centre for Biodiversity Science, Montréal, QuebecH3A 1B1, Canada
| | - Ceres Barros
- Department of Forest Resources Management, University of British Columbia, Vancouver, British ColumbiaV6T 1Z4, Canada
| | - Timothée Poisot
- Département de Sciences Biologiques, Université de Montréal, Montreal, QuebecH2V 0B3, Canada
- Quebec Centre for Biodiversity Science, Montréal, QuebecH3A 1B1, Canada
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2
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Wang Z, Tai W, Zhang X, Liu S, Niu Y, Chen W, Li N. Importance of plant and fruit traits on the structure of bird seed dispersal networks in different disturbed habitats. Integr Zool 2024; 19:753-762. [PMID: 38488176 DOI: 10.1111/1749-4877.12822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/12/2024]
Abstract
Species functional traits can influence seed dispersal processes and consequently affect species' role in the mutualistic network. Although the effect of animal traits on the structure of the seed dispersal network is well explored, it remains poorly understood how plant and fruit traits contribute to the structure. We here studied the effects of plant and fruit traits on the structure of bird seed dispersal networks across different disturbed habitats in the Meihua Mountain National Nature Reserve, Southeastern China. During the study period, 16, 20, 13, and 15 bird species were recorded foraging on 10, 11, 12, and 8 plant species, resulting in 511, 312, 265, and 201 foraging events in the protected forest, natural forest, village, and bamboo forest, respectively. The composition of these seed dispersal networks is not primarily influenced by a specific group of bulbul species, but rather by the presence of an endangered plant species, Taxus chinensis. As we expected, the structure of the four networks was different among the four disturbed habitats. Furthermore, our results also showed tree height and canopy density were the most important plant traits for structuring the seed dispersal network, while sugar, amylase, dry matter, and alkaloids were identified as significant fruit traits. Overall, our findings highlight the value of integrating trait-based ecology into the framework of the seed dispersal network and provide new insights for mutualistic network conservation in disturbed habitats.
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Affiliation(s)
- Zheng Wang
- College of Life Science, Nanjing Forestry University, Nanjing, Jiangsu, China
| | - Wei Tai
- College of Life Science, Nanjing Forestry University, Nanjing, Jiangsu, China
| | - Xuan Zhang
- Institute of Applied Ecology, Nanjing Xiaozhuang University, Nanjing, Jiangsu, China
| | - Shouguo Liu
- College of Life Science, Nanjing Forestry University, Nanjing, Jiangsu, China
| | - Yixing Niu
- College of Life Science, Nanjing Forestry University, Nanjing, Jiangsu, China
| | - Wenwen Chen
- School of Resources and Environmental Engineering, Anhui University, Hefei, China
| | - Ning Li
- Institute of Applied Ecology, Nanjing Xiaozhuang University, Nanjing, Jiangsu, China
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3
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Krasnov BR, Barki G, Khokhlova IS. Dissimilarity in flea and host assemblages and their interaction networks along a spatial distance gradient: different patterns revealed by different network dissimilarity metrics. Oecologia 2024; 205:397-409. [PMID: 38842685 DOI: 10.1007/s00442-024-05578-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Accepted: 05/29/2024] [Indexed: 06/07/2024]
Abstract
We investigated the distance-decay pattern (an increase in dissimilarity with increasing geographic distance) in regional assemblages of fleas and their small mammalian hosts, as well as their interaction networks, in four biogeographic realms. Dissimilarity of assemblages (βtotal) was partitioned into species richness differences (βrich) and species replacement (βrepl) components. Dissimilarity of networks was assessed using two metrics: (a) whole network dissimilarity (βWN) partitioned into species replacement (βST) and interaction rewiring (βOS) components and (b) D statistics, measuring dissimilarity in the pure structure of the networks, without using information on species identities and calculated for hosts-shared-by-fleas networks (Dh) and fleas-shared-by-hosts networks (Df). We asked whether the distance-decay pattern (a) occurs among interactor assemblages or their interaction networks; (b) depends on the network dissimilarity metric used; and (c) differs between realms. The βtotal and βrepl of flea and host assemblages increased with distance in all realms except for host assemblages in the Afrotropics. βrich for flea and host assemblages increased with distance in the Nearctic only. In networks, βWN and βST demonstrated a distance-decay pattern, whereas βOS was mainly spatially invariant except in the Neotropics. Correlations of Dh or Df and geographic distance were mostly non-significant. We conclude that investigations of dissimilarity in interaction networks should include both types of dissimilarity metrics (those that consider partner identities and those that consider the pure structure of networks). This will allow elucidating the predictability of some facets of network dissimilarity and the unpredictability of other facets.
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Affiliation(s)
- Boris R Krasnov
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 84990, Midreshet Ben-Gurion, Israel.
| | - Goni Barki
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 84990, Midreshet Ben-Gurion, Israel
| | - Irina S Khokhlova
- French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Midreshet Ben-Gurion, Israel
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4
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Tourbez C, Gómez-Martínez C, González-Estévez MÁ, Lázaro A. Pollen analysis reveals the effects of uncovered interactions, pollen-carrying structures, and pollinator sex on the structure of wild bee-plant networks. INSECT SCIENCE 2024; 31:971-988. [PMID: 37681316 DOI: 10.1111/1744-7917.13267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Revised: 07/11/2023] [Accepted: 07/31/2023] [Indexed: 09/09/2023]
Abstract
Pollination networks are increasingly used to model the complexity of interactions between pollinators and flowering plants in communities. Different methods exist to sample these interactions, with direct observations of plant-pollinator contacts in the field being by far the most common. Although the identification of pollen carried by pollinators allows uncovering interactions and increasing sample sizes, the methods used to build pollen-transport networks are variable and their effect on network structure remains unclear. To understand how interaction sampling influences the structure of networks, we analyzed the pollen found on wild bees from eight communities across Mallorca Island and investigated the differences in pollen loads between bee body parts (scopa vs. body) and sexes. We then assessed how these differences, as well as the uncovered interactions not detected in the field, influenced the structure of wild bee-plant networks. We identified a higher quantity and diversity of pollen in the scopa than in the rest of the female body, but these differences did not lead to differences in structure between plant-pollination (excluding scopa pollen) and bee-feeding interaction (including scopa pollen) networks. However, networks built with pollen data were richer in plant species and interactions and showed lower modularity and specialization (H2'), and higher nestedness than visitation networks based on field observations. Female interactions with plants were stronger compared to those of males, although not richer. Accordingly, females were more generalist (low d') and tended to be more central in interaction networks, indicating their more key role structuring pollination networks in comparison to males. Our study highlights the importance of palynological data to increase the resolution of networks, as well as to understand important ecological questions such as the differences between plant-pollination and bee-feeding interaction networks, and the role of sexes in pollination.
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Affiliation(s)
- Clément Tourbez
- Mediterranean Institute for Advanced Studies (UIB-CSIC), Global Change Research Group, Esporles, Balearic Islands, Spain
| | - Carmelo Gómez-Martínez
- Mediterranean Institute for Advanced Studies (UIB-CSIC), Global Change Research Group, Esporles, Balearic Islands, Spain
| | - Miguel Ángel González-Estévez
- Mediterranean Institute for Advanced Studies (UIB-CSIC), Global Change Research Group, Esporles, Balearic Islands, Spain
| | - Amparo Lázaro
- Mediterranean Institute for Advanced Studies (UIB-CSIC), Global Change Research Group, Esporles, Balearic Islands, Spain
- Department of Biology, Ecology Area, University of the Balearic Islands, Palma, Spain
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5
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Peralta G, CaraDonna PJ, Rakosy D, Fründ J, Pascual Tudanca MP, Dormann CF, Burkle LA, Kaiser-Bunbury CN, Knight TM, Resasco J, Winfree R, Blüthgen N, Castillo WJ, Vázquez DP. Predicting plant-pollinator interactions: concepts, methods, and challenges. Trends Ecol Evol 2024; 39:494-505. [PMID: 38262775 DOI: 10.1016/j.tree.2023.12.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 12/06/2023] [Accepted: 12/11/2023] [Indexed: 01/25/2024]
Abstract
Plant-pollinator interactions are ecologically and economically important, and, as a result, their prediction is a crucial theoretical and applied goal for ecologists. Although various analytical methods are available, we still have a limited ability to predict plant-pollinator interactions. The predictive ability of different plant-pollinator interaction models depends on the specific definitions used to conceptualize and quantify species attributes (e.g., morphological traits), sampling effects (e.g., detection probabilities), and data resolution and availability. Progress in the study of plant-pollinator interactions requires conceptual and methodological advances concerning the mechanisms and species attributes governing interactions as well as improved modeling approaches to predict interactions. Current methods to predict plant-pollinator interactions present ample opportunities for improvement and spark new horizons for basic and applied research.
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Affiliation(s)
- Guadalupe Peralta
- Multidisciplinary Institute of Plant Biology, National Council for Scientific and Technical Research (CONICET)-National University of Córdoba, Córdoba, X5016GCN, Argentina.
| | - Paul J CaraDonna
- Chicago Botanic Garden, Negaunee Institute for Plant Conservation Science and Action, Glencoe, IL 60022, USA; Plant Biology and Conservation, Northwestern University, Evanston, IL 60201, USA
| | - Demetra Rakosy
- Department for Community Ecology, Helmholtz Centre for Environmental Research (UFZ), Leipzig 04318, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig 04103, Germany
| | - Jochen Fründ
- Biometry and Environmental System Analysis, University of Freiburg, Freiburg 79098, Germany; Animal Network Ecology, Department of Biology, University of Hamburg, Hamburg 20148, Germany
| | - María P Pascual Tudanca
- Argentine Institute for Dryland Research, National Council for Scientific and Technical Research (CONICET)-National University of Cuyo, Mendoza 5500, Argentina
| | - Carsten F Dormann
- Biometry and Environmental System Analysis, University of Freiburg, Freiburg 79098, Germany
| | - Laura A Burkle
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
| | - Christopher N Kaiser-Bunbury
- Centre for Ecology and Conservation, Faculty of Environment, Science and Economy, University of Exeter, Penryn Campus, Penryn TR10 9FE, UK
| | - Tiffany M Knight
- Department for Community Ecology, Helmholtz Centre for Environmental Research (UFZ), Leipzig 04318, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig 04103, Germany; Institute of Biology, Martin Luther University Halle-Wittenberg, Halle (Saale) 06108, Germany
| | - Julian Resasco
- Department of Ecology & Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA
| | - Rachael Winfree
- Department of Ecology, Evolution & Natural Resources, Rutgers University, New Brunswick, NJ 08901, USA
| | - Nico Blüthgen
- Ecological Networks Lab, Technische Universität Darmstadt, Darmstadt 64287, Germany
| | - William J Castillo
- Biometry and Environmental System Analysis, University of Freiburg, Freiburg 79098, Germany
| | - Diego P Vázquez
- Argentine Institute for Dryland Research, National Council for Scientific and Technical Research (CONICET)-National University of Cuyo, Mendoza 5500, Argentina; Faculty of Exact and Natural Sciences, National University of Cuyo, Mendoza M5502, Argentina.
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6
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García Y, Giménez-Benavides L, Iriondo JM, Lara-Romero C, Méndez M, Morente-López J, Santamaría S. Addition of nocturnal pollinators modifies the structure of pollination networks. Sci Rep 2024; 14:1226. [PMID: 38216624 PMCID: PMC10786900 DOI: 10.1038/s41598-023-49944-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Accepted: 12/13/2023] [Indexed: 01/14/2024] Open
Abstract
Although the ecological network approach has substantially contributed to the study of plant-pollinator interactions, current understanding of their functional structure is biased towards diurnal pollinators. Nocturnal pollinators have been systematically ignored despite the publication of several studies that have tried to alleviate this diurnal bias. Here, we explored whether adding this neglected group of pollinators had a relevant effect on the overall architecture of three high mountain plant-pollinator networks. Including nocturnal moth pollinators modified network properties by decreasing total connectivity, connectance, nestedness and robustness to plant extinction; and increasing web asymmetry and modularity. Nocturnal moths were not preferentially connected to the most linked plants of the networks, and they were grouped into a specific "night" module in only one of the three networks. Our results indicate that ignoring the nocturnal component of plant-pollinator networks may cause changes in network properties different from those expected from random undersampling of diurnal pollinators. Consequently, the neglect of nocturnal interactions may provide a distorted view of the structure of plant-pollinator networks with relevant implications for conservation assessments.
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Affiliation(s)
- Yedra García
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain
- Department of Biology, Lund University, SE-223 62, Lund, Sweden
| | - Luis Giménez-Benavides
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain
| | - José M Iriondo
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain
| | - Carlos Lara-Romero
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain.
| | - Marcos Méndez
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain
| | - Javier Morente-López
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain
- Island Ecology and Evolution Research Group, Instituto de Productos Naturales y Agrobiología (IPNA-CSIC), Avda. Astrofísico Francisco Sánchez 3, E-38206, San Cristóbal de La Laguna, Santa Cruz de Tenerife, Spain
| | - Silvia Santamaría
- Area of Biodiversity and Conservation, ESCET, Universidad Rey Juan Carlos, C/Tulipán s/n, Móstoles, E-28933, Madrid, Spain
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7
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Encinas-Viso F, Bovill J, Albrecht DE, Florez-Fernandez J, Lessard B, Lumbers J, Rodriguez J, Schmidt-Lebuhn A, Zwick A, Milla L. Pollen DNA metabarcoding reveals cryptic diversity and high spatial turnover in alpine plant-pollinator networks. Mol Ecol 2023; 32:6377-6393. [PMID: 36065738 DOI: 10.1111/mec.16682] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 08/18/2022] [Accepted: 08/30/2022] [Indexed: 11/29/2022]
Abstract
Alpine plant-pollinator communities play an important role in the functioning of alpine ecosystems, which are highly threatened by climate change. However, we still have a poor understanding of how environmental factors and spatiotemporal variability shape these communities. Here, we investigate what drives structure and beta diversity in a plant-pollinator metacommunity from the Australian alpine region using two approaches: pollen DNA metabarcoding (MB) and observations. Individual pollinators often carry pollen from multiple plant species, and therefore we expected MB to reveal a more diverse and complex network structure. We used two gene regions (ITS2 and trnL) to identify plant species present in the pollen loads of 154 insect pollinator specimens from three alpine habitats and construct MB networks, and compared them to networks based on observations alone. We compared species and interaction turnover across space for both types of networks, and evaluated their differences for plant phylogenetic diversity and beta diversity. We found significant structural differences between the two types of networks; notably, MB networks were much less specialized but more diverse than observation networks, with MB detecting many cryptic plant species. Both approaches revealed that alpine pollination networks are very generalized, but we estimated a high spatial turnover of plant species (0.79) and interaction rewiring (0.6) as well as high plant phylogenetic diversity (0.68) driven by habitat differences based on the larger diversity of plant species and species interactions detected with MB. Overall, our findings show that habitat and microclimatic heterogeneity drives diversity and fine-scale spatial turnover of alpine plant-pollinator networks.
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Affiliation(s)
- Francisco Encinas-Viso
- Centre for Australian National Biodiversity Research, Australian Capital Territory, Canberra, Australia
| | - Jessica Bovill
- Centre for Australian National Biodiversity Research, Australian Capital Territory, Canberra, Australia
| | - David E Albrecht
- Centre for Australian National Biodiversity Research, Australian Capital Territory, Canberra, Australia
| | - Jaime Florez-Fernandez
- Australian National Insect Collection, Australian Capital Territory, Canberra, Australia
| | - Bryan Lessard
- Australian National Insect Collection, Australian Capital Territory, Canberra, Australia
| | - James Lumbers
- Australian National Insect Collection, Australian Capital Territory, Canberra, Australia
| | - Juanita Rodriguez
- Australian National Insect Collection, Australian Capital Territory, Canberra, Australia
| | - Alexander Schmidt-Lebuhn
- Centre for Australian National Biodiversity Research, Australian Capital Territory, Canberra, Australia
| | - Andreas Zwick
- Australian National Insect Collection, Australian Capital Territory, Canberra, Australia
| | - Liz Milla
- Centre for Australian National Biodiversity Research, Australian Capital Territory, Canberra, Australia
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8
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Banville F, Gravel D, Poisot T. What constrains food webs? A maximum entropy framework for predicting their structure with minimal biases. PLoS Comput Biol 2023; 19:e1011458. [PMID: 37669314 PMCID: PMC10503755 DOI: 10.1371/journal.pcbi.1011458] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Revised: 09/15/2023] [Accepted: 08/22/2023] [Indexed: 09/07/2023] Open
Abstract
Food webs are complex ecological networks whose structure is both ecologically and statistically constrained, with many network properties being correlated with each other. Despite the recognition of these invariable relationships in food webs, the use of the principle of maximum entropy (MaxEnt) in network ecology is still rare. This is surprising considering that MaxEnt is a statistical tool precisely designed for understanding and predicting many types of constrained systems. This principle asserts that the least-biased probability distribution of a system's property, constrained by prior knowledge about that system, is the one with maximum information entropy. MaxEnt has been proven useful in many ecological modeling problems, but its application in food webs and other ecological networks is limited. Here we show how MaxEnt can be used to derive many food-web properties both analytically and heuristically. First, we show how the joint degree distribution (the joint probability distribution of the numbers of prey and predators for each species in the network) can be derived analytically using the number of species and the number of interactions in food webs. Second, we present a heuristic and flexible approach of finding a network's adjacency matrix (the network's representation in matrix format) based on simulated annealing and SVD entropy. We built two heuristic models using the connectance and the joint degree sequence as statistical constraints, respectively. We compared both models' predictions against corresponding null and neutral models commonly used in network ecology using open access data of terrestrial and aquatic food webs sampled globally (N = 257). We found that the heuristic model constrained by the joint degree sequence was a good predictor of many measures of food-web structure, especially the nestedness and motifs distribution. Specifically, our results suggest that the structure of terrestrial and aquatic food webs is mainly driven by their joint degree distribution.
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Affiliation(s)
- Francis Banville
- Département de sciences biologiques, Université de Montréal, Montreal, Quebec, Canada
- Département de biologie, Université de Sherbrooke, Sherbrooke, Quebec, Canada
- Quebec Centre for Biodiversity Science, Quebec, Canada
| | - Dominique Gravel
- Département de biologie, Université de Sherbrooke, Sherbrooke, Quebec, Canada
- Quebec Centre for Biodiversity Science, Quebec, Canada
| | - Timothée Poisot
- Département de sciences biologiques, Université de Montréal, Montreal, Quebec, Canada
- Quebec Centre for Biodiversity Science, Quebec, Canada
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9
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Ohlmann M, Garnier J, Vuillon L. metanetwork: A R package dedicated to handling and representing trophic metanetworks. Ecol Evol 2023; 13:e10229. [PMID: 37593755 PMCID: PMC10427773 DOI: 10.1002/ece3.10229] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 05/30/2023] [Accepted: 06/14/2023] [Indexed: 08/19/2023] Open
Abstract
Trophic networks describe interactions between species at a given location and time. Due to environmental changes, anthropogenic perturbations or sampling effects, trophic networks may vary in space and time. The collection of network time series or networks in different sites thus constitutes a metanetwork. We present here the R package metanetwork, which will ease the representation, the exploration and analysis of trophic metanetwork data sets that are increasingly available. Our main methodological advance consists in suitable layout algorithm for trophic networks, which is based on trophic levels and dimension reduction in a graph diffusion kernel. In particular, it highlights relevant features of trophic networks (trophic levels, energetic channels). In addition, we developed tools to handle, compare visually and quantitatively and aggregate those networks. Static and dynamic visualisation functions have been developed to represent large networks. We apply our package workflow to several trophic network data sets.
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Affiliation(s)
- Marc Ohlmann
- Laboratoire d'Écologie Alpine, LECA, CNRSUniv. Savoie Mont Blanc, Univ. Grenoble AlpesGrenobleFrance
| | - Jimmy Garnier
- Laboratoire de Mathématiques, LAMA, CNRSUniv. Savoie Mont Blanc, Univ. Grenoble AlpesChambéryFrance
| | - Laurent Vuillon
- Laboratoire de Mathématiques, LAMA, CNRSUniv. Savoie Mont Blanc, Univ. Grenoble AlpesChambéryFrance
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10
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Zhu C, Li W, Campos-Arceiz A, Dalsgaard B, Ren P, Wang D, Zhang X, Sun M, Si Q, Kang Y, Ding P, Si X. The reliability of regional ecological knowledge to build local interaction networks: a test using seed-dispersal networks across land-bridge islands. Proc Biol Sci 2023; 290:20231221. [PMID: 37464753 PMCID: PMC10354482 DOI: 10.1098/rspb.2023.1221] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 06/21/2023] [Indexed: 07/20/2023] Open
Abstract
Building ecological networks is the fundamental basis of depicting how species in communities interact, but sampling complex interaction networks is extremely labour intensive. Recently, indirect ecological information has been applied to build interaction networks. Here we propose to extend the source of indirect ecological information, and applied regional ecological knowledge to build local interaction networks. Using a high-resolution dataset consisting of 22 locally observed networks with 17 572 seed-dispersal events, we test the reliability of indirectly derived local networks based on regional ecological knowledge (REK) across islands. We found that species richness strongly influenced 'local interaction rewiring' (i.e. the proportion of locally observed interactions among regionally interacting species), and all network properties were biased using REK-based networks. Notably, species richness and local interaction rewiring strongly affected estimations of REK-based network structures. However, locally observed and REK-based networks detected the same trends of how network structure correlates to island area and isolation. These results suggest that we should use REK-based networks cautiously for reflecting actual interaction patterns of local networks, but highlight that REK-based networks have great potential for comparative studies across environmental gradients. The use of indirect regional ecological information may thus advance our understanding of biogeographical patterns of species interactions.
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Affiliation(s)
- Chen Zhu
- MOE Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China
| | - Wande Li
- Zhejiang Zhoushan Archipelago Observation and Research Station, Institute of Eco-Chongming, Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200241, People's Republic of China
| | - Ahimsa Campos-Arceiz
- Southeast Asia Biodiversity Research Institute, Chinese Academy of Sciences & Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Yunnan 666303, People's Republic of China
| | - Bo Dalsgaard
- Section for Molecular Ecology and Evolution, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Peng Ren
- MOE Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China
| | - Duorun Wang
- Zhejiang Zhoushan Archipelago Observation and Research Station, Institute of Eco-Chongming, Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200241, People's Republic of China
| | - Xue Zhang
- MOE Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China
| | - Minghao Sun
- MOE Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China
| | - Qi Si
- MOE Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China
| | - Yi Kang
- Zhejiang Zhoushan Archipelago Observation and Research Station, Institute of Eco-Chongming, Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200241, People's Republic of China
| | - Ping Ding
- MOE Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, People's Republic of China
| | - Xingfeng Si
- Zhejiang Zhoushan Archipelago Observation and Research Station, Institute of Eco-Chongming, Zhejiang Tiantong Forest Ecosystem National Observation and Research Station, School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200241, People's Republic of China
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11
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Chiu CH, Chao A, Vogel S, Kriegel P, Thorn S. Quantifying and estimating ecological network diversity based on incomplete sampling data. Philos Trans R Soc Lond B Biol Sci 2023; 378:20220183. [PMID: 37246386 PMCID: PMC10225855 DOI: 10.1098/rstb.2022.0183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Accepted: 02/01/2023] [Indexed: 05/30/2023] Open
Abstract
An ecological network refers to the ecological interactions among sets of species. Quantification of ecological network diversity and related sampling/estimation challenges have explicit analogues in species diversity research. A unified framework based on Hill numbers and their generalizations was developed to quantify taxonomic, phylogenetic and functional diversity. Drawing on this unified framework, we propose three dimensions of network diversity that incorporate the frequency (or strength) of interactions, species phylogenies and traits. As with surveys in species inventories, nearly all network studies are based on sampling data and thus also suffer from under-sampling effects. Adapting the sampling/estimation theory and the iNEXT (interpolation/extrapolation) standardization developed for species diversity research, we propose the iNEXT.link method to analyse network sampling data. The proposed method integrates the following four inference procedures: (i) assessment of sample completeness of networks; (ii) asymptotic analysis via estimating the true network diversity; (iii) non-asymptotic analysis based on standardizing sample completeness via rarefaction and extrapolation with network diversity; and (iv) estimation of the degree of unevenness or specialization in networks based on standardized diversity. Interaction data between European trees and saproxylic beetles are used to illustrate the proposed procedures. The software iNEXT.link has been developed to facilitate all computations and graphics. This article is part of the theme issue 'Detecting and attributing the causes of biodiversity change: needs, gaps and solutions'.
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Affiliation(s)
- Chun-Huo Chiu
- Department of Agronomy, National Taiwan University, Taipei 10617, Taiwan
| | - Anne Chao
- Institute of Statistics, National Tsing Hua University, Hsin-Chu 30043, Taiwan
| | - Sebastian Vogel
- Bavarian Environment Agency, Biodiversitätszentrum Rhön, Marktplatz 11, 97653 Bischofsheim i.d.R., Germany
| | - Peter Kriegel
- Field Station Fabrikschleichach, Biocenter, University of Würzburg, Glashüttenstr. 5, 96181 Rauhenebrach, Germany
| | - Simon Thorn
- Hessian Agency for Nature Conservation, Environment and Geology, Biodiversity Center, Europastraße 10, 35394 Gießen, Germany
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12
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Mutualistic interaction network structure between bird and plant species in a semi-arid Neotropical environment. ACTA OECOLOGICA 2023. [DOI: 10.1016/j.actao.2023.103897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/13/2023]
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13
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Brimacombe C, Bodner K, Michalska-Smith M, Poisot T, Fortin MJ. Shortcomings of reusing species interaction networks created by different sets of researchers. PLoS Biol 2023; 21:e3002068. [PMID: 37011096 PMCID: PMC10101633 DOI: 10.1371/journal.pbio.3002068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 04/13/2023] [Accepted: 03/07/2023] [Indexed: 04/05/2023] Open
Abstract
Given the requisite cost associated with observing species interactions, ecologists often reuse species interaction networks created by different sets of researchers to test their hypotheses regarding how ecological processes drive network topology. Yet, topological properties identified across these networks may not be sufficiently attributable to ecological processes alone as often assumed. Instead, much of the totality of topological differences between networks-topological heterogeneity-could be due to variations in research designs and approaches that different researchers use to create each species interaction network. To evaluate the degree to which this topological heterogeneity is present in available ecological networks, we first compared the amount of topological heterogeneity across 723 species interaction networks created by different sets of researchers with the amount quantified from non-ecological networks known to be constructed following more consistent approaches. Then, to further test whether the topological heterogeneity was due to differences in study designs, and not only to inherent variation within ecological networks, we compared the amount of topological heterogeneity between species interaction networks created by the same sets of researchers (i.e., networks from the same publication) with the amount quantified between networks that were each from a unique publication source. We found that species interaction networks are highly topologically heterogeneous: while species interaction networks from the same publication are much more topologically similar to each other than interaction networks that are from a unique publication, they still show at least twice as much heterogeneity as any category of non-ecological networks that we tested. Altogether, our findings suggest that extra care is necessary to effectively analyze species interaction networks created by different researchers, perhaps by controlling for the publication source of each network.
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Affiliation(s)
- Chris Brimacombe
- Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
| | - Korryn Bodner
- MAP Centre for Urban Health Solutions, St. Michael's Hospital, Toronto, Ontario, Canada
| | - Matthew Michalska-Smith
- Department of Ecology, Evolution and Behavior, University of Minnesota, Minneapolis, Minnesota, United States of America
- Department of Plant Pathology, University of Minnesota, Minneapolis, Minnesota, United States of America
| | - Timothée Poisot
- Département de Sciences Biologiques, Université de Montréal, Montréal, Québec, Canada
- Centre de la Science de la Biodiversité du Québec, Montréal, Québec, Canada
| | - Marie-Josée Fortin
- Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
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14
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Bello C, Schleuning M, Graham CH. Analyzing trophic ecosystem functions with the interaction functional space. Trends Ecol Evol 2023; 38:424-434. [PMID: 36599738 DOI: 10.1016/j.tree.2022.12.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Revised: 11/18/2022] [Accepted: 12/01/2022] [Indexed: 01/04/2023]
Abstract
Quantifying the vulnerability of ecosystems to global change requires a better understanding of how trophic ecosystem functions emerge. So far, trophic ecosystem functions have been studied from the perspective of either functional diversity or network ecology. To integrate these two perspectives, we propose the interaction functional space (IFS) a conceptual framework to simultaneously analyze the effects of traits and interactions on trophic functions. We exemplify the added value of our framework for seed dispersal and wood decomposition and show how species interactions influence the relationship between functional trait diversity and trophic functions. We propose future applications for a range of functions where the IFS can help to elucidate mechanisms underpinning trophic functions and facilitate understanding of functional changes in ecosystems amidst global change.
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Affiliation(s)
- Carolina Bello
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Zürcherstrasse 111, 8903 Birmensdorf, Switzerland; Institute of Integrative Biology, ETH Zürich, Universitätstrasse 2, 8092 Zürich, Switzerland.
| | - Matthias Schleuning
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage 25, 60325 Frankfurt, Germany
| | - Catherine H Graham
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Zürcherstrasse 111, 8903 Birmensdorf, Switzerland
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15
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Quintero E, Rodríguez-Sánchez F, Jordano P. Reciprocity and interaction effectiveness in generalised mutualisms among free-living species. Ecol Lett 2023; 26:132-146. [PMID: 36450595 PMCID: PMC10099531 DOI: 10.1111/ele.14141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2022] [Revised: 09/12/2022] [Accepted: 10/24/2022] [Indexed: 12/02/2022]
Abstract
Mutualistic interactions among free-living species generally involve low-frequency interactions and highly asymmetric dependence among partners, yet our understanding of factors behind their emergence is still limited. Using individual-based interactions of a super-generalist fleshy-fruited plant with its frugivore assemblage, we estimated the Resource Provisioning Effectiveness (RPE) and Seed Dispersal Effectiveness (SDE) to assess the balance in the exchange of resources. Plants were highly dependent on a few frugivore species, while frugivores interacted with most individual plants, resulting in strong asymmetries of mutual dependence. Interaction effectiveness was mainly driven by interaction frequency. Despite highly asymmetric dependences, the strong reliance on quantity of fruit consumed determined high reciprocity in rewards between partners (i.e. higher energy provided by the plant, more seedlings recruited), which was not obscured by minor variations in the quality of animal or plant service. We anticipate reciprocity will emerge in low-intimacy mutualisms where the mutualistic outcome largely relies upon interaction frequency.
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Affiliation(s)
- Elena Quintero
- Integrative Ecology Group, Estación Biológica de Doñana, Sevilla, Spain
| | - Francisco Rodríguez-Sánchez
- Integrative Ecology Group, Estación Biológica de Doñana, Sevilla, Spain.,Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain
| | - Pedro Jordano
- Integrative Ecology Group, Estación Biológica de Doñana, Sevilla, Spain.,Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain
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16
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Wang G, Huang Y, Yao W, Huang Q, Huang Y, Wei L, Zhou Q. Structure and characteristics of the plant-frugivore bird network from the Guilin Botanical Garden. PeerJ 2023; 11:e15028. [PMID: 36945357 PMCID: PMC10024898 DOI: 10.7717/peerj.15028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Accepted: 02/17/2023] [Indexed: 03/18/2023] Open
Abstract
The interaction between plants and frugivores is crucial to ecosystem function and community diversity. However, little is known about the interaction between plants and frugivorous bird species in urban green spaces. We observed interactions between plants and frugivorous birds in the Guilin Botanical Garden for one year and determined the structure and characteristics of the interaction network. We also analyzed the impact of species traits on their network roles. Interactions between 14 frugivorous birds and 13 fruit plant species were recorded in the study area. Autumn interactions comprised 38.79% of the overall network, and winter interactions comprised 33.15%. The modularity (Q, z-score) of the network was higher in autumn; the weighted nestedness (wNODF, z-score) and interaction evenness (E2 , z-score) of the network were higher in winter; the connectance (C, z-score) and interaction diversity (z-score) of the network were higher in spring; and the specialization (H2', z-score) of the network was higher in summer. The observed network showed lower C, lower interaction H2 , lower E2 , lower wNODF, higher H2' and higher Q when compared to the random networks. The bird species most important to network stability were Hemixos castanonotus, Parus venustulus, and Pycnonotus sinensis. The most important plant species were Alocasia macrorrhiza, Cinnamomum camphora, and Machilus nanmu. Of all the bird and plant traits included in this study, only plant color had a significant impact on species strength, with black fruit having a higher species strength. Our results suggest that interaction networks in urban green spaces can be temporally complex and variable and that a network approach can be an important monitoring tool for detecting the status of crucial ecosystem functions.
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Affiliation(s)
- Guohai Wang
- College of Chemistry and Bioengineering, Guangxi Normal University for Nationalities, Chongzuo, Guangxi, China
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection, Ministry of Education; Guangxi Key Laboratory of Rare and Endangered Animal Ecology, Guangxi Normal University, Guilin, Guangxi, China
| | - Yang Huang
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection, Ministry of Education; Guangxi Key Laboratory of Rare and Endangered Animal Ecology, Guangxi Normal University, Guilin, Guangxi, China
| | - Wei Yao
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection, Ministry of Education; Guangxi Key Laboratory of Rare and Endangered Animal Ecology, Guangxi Normal University, Guilin, Guangxi, China
| | - Qiuchan Huang
- College of Chemistry and Bioengineering, Guangxi Normal University for Nationalities, Chongzuo, Guangxi, China
| | - Yongping Huang
- College of Mathematics, Physics and Electronic Information Engineering, Guangxi Normal University for Nationalities, Chongzuo, Guangxi, China
| | - Lijuan Wei
- College of Mathematics, Physics and Electronic Information Engineering, Guangxi Normal University for Nationalities, Chongzuo, Guangxi, China
| | - Qihai Zhou
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection, Ministry of Education; Guangxi Key Laboratory of Rare and Endangered Animal Ecology, Guangxi Normal University, Guilin, Guangxi, China
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17
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García-Herrera LV, Ramírez-Fráncel LA, Guevara G, Lim BK, Losada-Prado S. Wing morphology is related to niche specialization and interaction networks in stenodermatine bats (Chiroptera: Phyllostomidae). J Mammal 2022. [DOI: 10.1093/jmammal/gyac112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
Abstract
Plant–animal interactions constitute some of the most important ecological processes for the maintenance of tropical forests. Bats are the only group of mammals capable of true flight and have been recognized as important dispersers of pioneer and secondary successional plant species. Although progress has been made in the study of Neotropical bats, morphological variation of the wing and its influence on niche separation between species is unknown. We evaluated relationships among habitat structures of selected Colombian tropical dry forest patches, the diet through interaction networks, and wing morphology of 11 species of bats in the Stenodermatinae subfamily (297 individuals) using geometric morphometry in a phylogenetic context. The results indicate that the phylogenetic signal for wing size is greater than for wing shape, thus providing some evidence for evolutionary convergence. Wing shape variation was associated primarily with the distal anatomical tip of the third finger and the joint between the humerus and the radius and ulna. Species with wide, short wings, as in the genus Artibeus had generalist diets and less nested positions within the interaction networks. In contrast, species with elongated and pointed wings, such as Sturnira and Platyrrhinus, had specialized diets and more nested positions within the interaction networks. We argue that wing shape variation may play an important role as a source of interspecific variation leading to food specialization within tropical bat communities.
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Affiliation(s)
- Leidy Viviana García-Herrera
- Programa de Doctorado en Ciencias Biológicas and Grupo de Investigación en Zoología (GIZ), Facultad de Ciencias, IDEAD, Universidad del Tolima , Altos de Santa Elena, Ibagué 730004 , Colombia
| | - Leidy Azucena Ramírez-Fráncel
- Programa de Doctorado en Ciencias Biológicas and Grupo de Investigación en Zoología (GIZ), Facultad de Ciencias, IDEAD, Universidad del Tolima , Altos de Santa Elena, Ibagué 730004 , Colombia
| | - Giovany Guevara
- Departamento de Biología and Grupo de Investigación en Zoología (GIZ), Facultad de Ciencias, Universidad del Tolima , Altos de Santa Elena, Ibagué M5H 2N2 , Colombia
| | - Burton K Lim
- Department of Natural History, Royal Ontario Museum , 100 Queen’s Park, Toronto, Ontario M5S 2C6 , Canada
| | - Sergio Losada-Prado
- Departamento de Biología and Grupo de Investigación en Zoología (GIZ), Facultad de Ciencias, Universidad del Tolima , Altos de Santa Elena, Ibagué M5H 2N2 , Colombia
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18
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Gupta A, David Figueroa H, O'Gorman E, Jones I, Woodward G, Petchey OL. How many predator guts are required to predict trophic interactions? FOOD WEBS 2022. [DOI: 10.1016/j.fooweb.2022.e00269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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19
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de Lourdes Nuñez Landa M, Carlos Montero Castro J, César Monterrubio-Rico T, Lara-Cabrera SI, Prieto-Torres DA. Predicting co-distribution patterns of parrots and woody plants under global changes: The case of the Lilac-crowned Amazon and Neotropical dry forests. J Nat Conserv 2022. [DOI: 10.1016/j.jnc.2022.126323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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20
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Global and regional ecological boundaries explain abrupt spatial discontinuities in avian frugivory interactions. Nat Commun 2022; 13:6943. [PMID: 36376314 PMCID: PMC9663448 DOI: 10.1038/s41467-022-34355-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 10/20/2022] [Indexed: 11/16/2022] Open
Abstract
Species interactions can propagate disturbances across space via direct and indirect effects, potentially connecting species at a global scale. However, ecological and biogeographic boundaries may mitigate this spread by demarcating the limits of ecological networks. We tested whether large-scale ecological boundaries (ecoregions and biomes) and human disturbance gradients increase dissimilarity among plant-frugivore networks, while accounting for background spatial and elevational gradients and differences in network sampling. We assessed network dissimilarity patterns over a broad spatial scale, using 196 quantitative avian frugivory networks (encompassing 1496 plant and 1004 bird species) distributed across 67 ecoregions, 11 biomes, and 6 continents. We show that dissimilarities in species and interaction composition, but not network structure, are greater across ecoregion and biome boundaries and along different levels of human disturbance. Our findings indicate that biogeographic boundaries delineate the world's biodiversity of interactions and likely contribute to mitigating the propagation of disturbances at large spatial scales.
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Rumeu B, González‐Varo JP, de Castro C, López‐Orta A, Illera JC, Miñarro M, García D. Increasing efficiency and reducing bias in the sampling of seed–dispersal interactions based on mist‐netted birds. OIKOS 2022. [DOI: 10.1111/oik.09261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Beatriz Rumeu
- Depto de Biología – IVAGRO, Univ. de Cádiz Puerto Real Spain
| | | | - Cristina de Castro
- Depto de Biología de Organismos y Sistemas (Univ. de Oviedo) and: Inst. Mixto de Investigación en Biodiversidad (Univ. Oviedo‐CSIC‐Princ. Asturias) Mieres Spain
| | - Antonio López‐Orta
- Inst. Mixto de Investigación en Biodiversidad (Univ. Oviedo‐CSIC‐Princ. Asturias), Univ. de Oviedo Mieres Spain
| | - Juan Carlos Illera
- Inst. Mixto de Investigación en Biodiversidad (Univ. Oviedo‐CSIC‐Princ. Asturias), Univ. de Oviedo Mieres Spain
| | - Marcos Miñarro
- Servicio Regional de Investigación y Desarrollo Agroalimentario (SERIDA) Villaviciosa Spain
| | - Daniel García
- Depto de Biología de Organismos y Sistemas (Univ. de Oviedo) and: Inst. Mixto de Investigación en Biodiversidad (Univ. Oviedo‐CSIC‐Princ. Asturias) Mieres Spain
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22
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Felix GM, Pinheiro RBP, Jorge LR, Lewinsohn TM. A framework for hierarchical compound topologies in species interaction networks. OIKOS 2022. [DOI: 10.1111/oik.09538] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Gabriel M. Felix
- Univ. Estadual de Campinas, Depto de Biologia Animal, Inst. de Biologia Campinas Brazil
| | - Rafael B. P. Pinheiro
- Univ. Estadual de Campinas, Depto de Biologia Animal, Inst. de Biologia Campinas Brazil
| | - Leonardo R. Jorge
- Inst. of Entomology, Biology Centre of the Czech Academy of Sciences České Budějovice Czechia
| | - Thomas M. Lewinsohn
- Univ. Estadual de Campinas, Depto de Biologia Animal, Inst. de Biologia Campinas Brazil
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23
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Vizentin-Bugoni J, Sperry JH, Kelley JP, Foster JT, Drake DR, Case SB, Gleditsch JM, Hruska AM, Wilcox RC, Tarwater CE. Mechanisms underlying interaction frequencies and robustness in a novel seed dispersal network: lessons for restoration. Proc Biol Sci 2022; 289:20221490. [PMID: 36100025 PMCID: PMC9470274 DOI: 10.1098/rspb.2022.1490] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Accepted: 08/15/2022] [Indexed: 12/25/2022] Open
Abstract
As human-caused extinctions and invasions accumulate across the planet, understanding the processes governing ecological functions mediated by species interactions, and anticipating the effect of species loss on such functions become increasingly urgent. In seed dispersal networks, the mechanisms that influence interaction frequencies may also influence the capacity of a species to switch to alternative partners (rewiring), influencing network robustness. Studying seed dispersal interactions in novel ecosystems on O'ahu island, Hawai'i, we test whether the same mechanisms defining interaction frequencies can regulate rewiring and increase network robustness to simulated species extinctions. We found that spatial and temporal overlaps were the primary mechanisms underlying interaction frequencies, and the loss of the more connected species affected networks to a greater extent. Further, rewiring increased network robustness, and morphological matching and spatial and temporal overlaps between partners were more influential on network robustness than species abundances. We argue that to achieve self-sustaining ecosystems, restoration initiatives can consider optimal morphological matching and spatial and temporal overlaps between consumers and resources to maximize chances of native plant dispersal. Specifically, restoration initiatives may benefit from replacing invasive species with native species possessing characteristics that promote frequent interactions and increase the probability of rewiring (such as long fruiting periods, small seeds and broad distributions).
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Affiliation(s)
- Jeferson Vizentin-Bugoni
- Departamento de Ecologia, Universidade Federal do Rio Grande do Sul, Avenue Bento Gonçalves 9500, Porto Alegre, Rio Grande do Sul 91501-970, Brazil
- US Army Corps of Engineers, Engineer Research Development Center, 2902 Newmark Dr, Champaign, IL 61826, USA
- Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, 1102 South Goodwin Avenue, Urbana, IL 61801, USA
- Department of Zoology and Physiology, University of Wyoming, 1000 East University Avenue, Laramie, WY 82071, USA
| | - Jinelle H. Sperry
- US Army Corps of Engineers, Engineer Research Development Center, 2902 Newmark Dr, Champaign, IL 61826, USA
- Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, 1102 South Goodwin Avenue, Urbana, IL 61801, USA
| | - J. Patrick Kelley
- Department of Zoology and Physiology, University of Wyoming, 1000 East University Avenue, Laramie, WY 82071, USA
| | - Jeffrey T. Foster
- Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA
| | - Donald R. Drake
- School of Life Sciences, University of Hawai‘i at Mānoa, Honolulu, HI 96822, USA
| | - Samuel B. Case
- Department of Zoology and Physiology, University of Wyoming, 1000 East University Avenue, Laramie, WY 82071, USA
| | - Jason M. Gleditsch
- Department of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, 1102 South Goodwin Avenue, Urbana, IL 61801, USA
- Integrative Ecology Laboratory, Center for Biodiversity, Temple University, Philadelphia, PA 19122, USA
| | - Amy M. Hruska
- Department of Botany, University of Hawai‘i at Mānoa, Honolulu, HI 96822, USA
- Smithsonian Environmental Research Center, Edgewater, MD 21037, USA
| | - Rebecca C. Wilcox
- Department of Zoology and Physiology, University of Wyoming, 1000 East University Avenue, Laramie, WY 82071, USA
| | - Corey E. Tarwater
- Department of Zoology and Physiology, University of Wyoming, 1000 East University Avenue, Laramie, WY 82071, USA
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24
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Corrigendum. Ecol Lett 2022; 25:2340-2344. [PMID: 36099451 DOI: 10.1111/ele.14105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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25
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Pinheiro RBP, Felix GMF, Lewinsohn TM. Hierarchical compound topology uncovers complex structure of species interaction networks. J Anim Ecol 2022; 91:2248-2260. [DOI: 10.1111/1365-2656.13806] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 08/23/2022] [Indexed: 11/30/2022]
Affiliation(s)
- Rafael B. P. Pinheiro
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas Campinas SP Brazil
| | - Gabriel M. F. Felix
- Graduate Program in Ecology, Instituto de Biologia, Universidade Estadual de Campinas Campinas SP Brazil
| | - Thomas M. Lewinsohn
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas Campinas SP Brazil
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Salim JA, Saraiva AM, Zermoglio PF, Agostini K, Wolowski M, Drucker DP, Soares FM, Bergamo PJ, Varassin IG, Freitas L, Maués MM, Rech AR, Veiga AK, Acosta AL, Araujo AC, Nogueira A, Blochtein B, Freitas BM, Albertini BC, Maia-Silva C, Nunes CEP, Pires CSS, dos Santos CF, Queiroz EP, Cartolano EA, de Oliveira FF, Amorim FW, Fontúrbel FE, da Silva GV, Consolaro H, Alves-dos-Santos I, Machado IC, Silva JS, Aleixo KP, Carvalheiro LG, Rocca MA, Pinheiro M, Hrncir M, Streher NS, Ferreira PA, de Albuquerque PMC, Maruyama PK, Borges RC, Giannini TC, Brito VLG. Data standardization of plant-pollinator interactions. Gigascience 2022; 11:6593428. [PMID: 35639882 PMCID: PMC9154084 DOI: 10.1093/gigascience/giac043] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Background Animal pollination is an important ecosystem function and service, ensuring both the integrity of natural systems and human well-being. Although many knowledge shortfalls remain, some high-quality data sets on biological interactions are now available. The development and adoption of standards for biodiversity data and metadata has promoted great advances in biological data sharing and aggregation, supporting large-scale studies and science-based public policies. However, these standards are currently not suitable to fully support interaction data sharing. Results Here we present a vocabulary of terms and a data model for sharing plant–pollinator interactions data based on the Darwin Core standard. The vocabulary introduces 48 new terms targeting several aspects of plant–pollinator interactions and can be used to capture information from different approaches and scales. Additionally, we provide solutions for data serialization using RDF, XML, and DwC-Archives and recommendations of existing controlled vocabularies for some of the terms. Our contribution supports open access to standardized data on plant–pollinator interactions. Conclusions The adoption of the vocabulary would facilitate data sharing to support studies ranging from the spatial and temporal distribution of interactions to the taxonomic, phenological, functional, and phylogenetic aspects of plant–pollinator interactions. We expect to fill data and knowledge gaps, thus further enabling scientific research on the ecology and evolution of plant–pollinator communities, biodiversity conservation, ecosystem services, and the development of public policies. The proposed data model is flexible and can be adapted for sharing other types of interactions data by developing discipline-specific vocabularies of terms.
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Affiliation(s)
- José A Salim
- Correspondence authors. José A. Salim. Universidade Estadual de Campinas Instituto de Biologia Departamento de Biologia Vegetal Rua Monteiro Lobato, 255, Phone +55 (19) 3521-6166. E-mail:
| | - Antonio M Saraiva
- Correspondence authors. Antonio M. Saraiva. Laboratório de Automação Agrícola - Escola Politécnica da USP Av. Prof. Luciano Gualberto, travessa 3, nº 158, sala C2-56 Edifício de Engenharia Elétrica Cidade Universitária - São Paulo - SP CEP 05508-900 Fone: +55 (11) 3091-5366 Fax: +55 (11) 3091-5294. E-mail:
| | - Paula F Zermoglio
- Departamento de Ecología, Genética y Evolución, Instituto IEGEBA (CONICET-UBA), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Kayna Agostini
- Departamento de Ciências da Natureza, Matemática e Educação, Universidade Federal de São Carlos, Rodovia Anhanguera km 174, Araras, São Paulo, Caixa Postal 153. CEP 13600-970, Brazil
| | - Marina Wolowski
- Instituto de Ciências da Natureza, Universidade Federal de Alfenas, Rua Gabriel Monteiro da Silva 700, Alfenas, Minas Gerais, 37130-001, Brazil
| | - Debora P Drucker
- Embrapa Agricultura Digital, Empresa Brasileira de Pesquisa Agropecuária (Embrapa), Campinas, SP, Brazil
| | - Filipi M Soares
- Escola Politécnica, Universidade de São Paulo, São Paulo, SP, 05508-010, Brazil
| | - Pedro J Bergamo
- Jardim Botânico do Rio de Janeiro, R. Pacheco Leão 915, Rio de Janeiro, Rio de Janeiro, 22460-030, Brazil
| | - Isabela G Varassin
- Departamento de Botânica, Universidade Federal do Paraná, Curitiba, Paraná, Brazil
| | - Leandro Freitas
- Jardim Botânico do Rio de Janeiro, R. Pacheco Leão 915, Rio de Janeiro, Rio de Janeiro, 22460-030, Brazil
| | - Márcia M Maués
- Laboratório de Entomologia, Embrapa Amazônia Oriental, Trav. Dr. Enéas Pinheiro, s/n°, Bairro do Marco, Belém, Pará, 66095-903, Brazil
| | - Andre R Rech
- Faculdade Interdisciplinar de Humanidades, Centro Multiusuário de Pesquisa em Ciência Florestal (MULTIFLOR), Universidade Federal dos Vales do Jequitinhonha e Mucuri, Diamantina, Minas Gerais, 39100-000, Brazil
| | - Allan K Veiga
- Escola Politécnica, Universidade de São Paulo, São Paulo, SP, 05508-010, Brazil
| | - Andre L Acosta
- Instituto Tecnológico Vale. Rua Boaventura da Silva, 955, 66055-900, Belém, Pará, Brazil
| | - Andréa C Araujo
- Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil
| | - Anselmo Nogueira
- Laboratório de Interações Plant-Animal (LIPA), Centro de Ciências Naturais e Humanas (CCNH), Universidade Federal do ABC, Alameda da Universidade, s/nº, Anchieta, São Bernardo do Campo, São Paulo, Brazil
| | - Betina Blochtein
- Escola de Ciências da Saúde e da Vida, Pontifícia Universidade Católica do Rio Grande do Sul, Porto Alegre, RS, 90619-900, Brazil
| | - Breno M Freitas
- Departamento de Zootecnia, Campus Universitário do Pici, Universidade Federal do Ceará, Centro de Ciências Agrárias, Fortaleza, CE, Brazil
| | - Bruno C Albertini
- Escola Politécnica, Universidade de São Paulo, São Paulo, SP, 05508-010, Brazil
| | - Camila Maia-Silva
- Departamento de Biociências, Universidade Federal Rural do Semi-Árido, Av. Francisco Mota, n° 572, Presidente Costa e Silva, Mossoró, RN, 59625-900, Brazil
| | - Carlos E P Nunes
- Department of Biological and Environmental Sciences, Cottrell Building, University of Stirling, Stirling FK9 4LA, Scotland, United Kingdom
| | - Carmen S S Pires
- Embrapa Recursos Genéticos e Biotecnologia, Brasília, Distrito Federal, Brazil
| | - Charles F dos Santos
- Escola de Ciências da Saúde e da Vida, Pontifícia Universidade Católica do Rio Grande do Sul, Porto Alegre, RS, 90619-900, Brazil
| | - Elisa P Queiroz
- Departamento de Ecologia, Instituto de Biociências, Universidade de São Paulo, São Paulo, Brazil
| | - Etienne A Cartolano
- Escola Politécnica, Universidade de São Paulo, São Paulo, SP, 05508-010, Brazil
| | - Favízia F de Oliveira
- Laboratório de Bionomia, Biogeografia e Sistemática de Insetos (BIOSIS), Instituto de Biologia (IBIO), Universidade Federal da Bahia, 40170-115 Salvador, Bahia, Brazil
| | - Felipe W Amorim
- Laboratório de Ecologia da Polinização e Interações (LEPI), Programa de Pós-graduação em Botânica, Programa de Pós-graduação em Zoologia, Instituto de Biociências, Universidade Estadual Paulista, Botucatu, SP, Brazil
| | - Francisco E Fontúrbel
- Instituto de Biología, Facultad de Ciencias, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile
| | - Gleycon V da Silva
- Programa de Pós-Graduação em Ecologia / INPA-V8 - Instituto Nacional de Pesquisas da Amazônia, Av. André Araújo 2936, Petrópolis, 69067-375, Manaus - AM, Brazil
| | - Hélder Consolaro
- Instituto de Biotecnologia, Universidade Federal de Catalão, Catalão, Goiás, Brazil
| | - Isabel Alves-dos-Santos
- Departamento de Ecologia, Instituto de Biociências, Universidade de São Paulo, São Paulo, Brazil
| | - Isabel C Machado
- Programa de Pós-Graduação em Biologia Vegetal, Departamento de Botânica, Universidade Federal de Pernambuco, Recife, PE 50670-901, Brazil
| | - Juliana S Silva
- Instituto Federal de Educação Ciência e Tecnologia de Mato Grosso, Avenida Sen. Filinto Müller, 953 - CEP: 78043-400 - Cuiabá, MT, Brazil
| | - Kátia P Aleixo
- Associação Brasileira de Estudos das Abelhas (A.B.E.L.H.A.), São Paulo, SP, 04535-001, Brazil
| | - Luísa G Carvalheiro
- Departamento de Ecologia, Universidade Federal de Goiás, Campus Samambaia, Goiânia, Brazil Centre for Ecology, Evolution and Environmental Changes (cE3c), University of Lisboa, Lisbon, Portugal
| | - Márcia A Rocca
- Departamento de Ecologia, Centro de Ciências Biológicas e da Saúde, Universidade Federal de Sergipe, Avenida Marechal Rondon s/n, São Cristóvão, Sergipe, 49100-000, Brazil
| | - Mardiore Pinheiro
- Universidade Federal da Fronteira Sul, R. Major Antônio Cardoso 590, Cerro Largo, Rio Grande do Sul, 97900-000, Brazil
| | - Michael Hrncir
- Departamento de Fisiologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, 321, Travessa 14, São Paulo, São Paulo, 05508-900, Brazil
| | - Nathália S Streher
- Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA,15260, United States of America
| | - Patricia A Ferreira
- Environmental Sciences Department, Federal University of São Carlos, São Paulo, Brazil
| | | | - Pietro K Maruyama
- Centro de Síntese Ecológica e Conservação, Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Rafael C Borges
- Instituto Tecnológico Vale. Rua Boaventura da Silva, 955, 66055-900, Belém, Pará, Brazil
| | - Tereza C Giannini
- Instituto Tecnológico Vale. Rua Boaventura da Silva, 955, 66055-900, Belém, Pará, Brazil
| | - Vinícius L G Brito
- Instituto de Biologia, Universidade Federal de Uberlândia, Rua Ceará sn, Uberlândia, Minas Gerais, 38.405-302, Brazil
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27
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Brimacombe C, Bodner K, Fortin MJ. How network size strongly determines trophic specialisation: A technical comment on Luna et al. (2022). Ecol Lett 2022; 25:1914-1916. [PMID: 35610664 DOI: 10.1111/ele.14029] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 04/23/2022] [Accepted: 05/03/2022] [Indexed: 01/02/2023]
Abstract
Luna et al. (2022) concluded that the environment contributes to explaining specialisation in open plant-pollinator networks. When reproducing their study, we instead found that network size alone largely explained the variation in their specialisation metrics. Thus, we question whether empirical network specialisation is driven by the environment.
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Affiliation(s)
- Chris Brimacombe
- Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
| | - Korryn Bodner
- MAP Centre for Urban Health Solutions, St. Michael's Hospital, Unity Health Toronto, Toronto, Ontario, Canada
| | - Marie-Josée Fortin
- Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada
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28
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Carrete M, Hiraldo F, Romero-Vidal P, Blanco G, Hernández-Brito D, Sebastián-González E, Díaz-Luque JA, Tella JL. Worldwide Distribution of Antagonistic-Mutualistic Relationships Between Parrots and Palms. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.790883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Palms, like all plants, show coevolutionary relationships with animals that have been traditionally categorized as mutualistic (seed dispersers and pollinators) or antagonistic (seed predators). This dual perspective, however, has prevented a full understanding of their true interactions with some animal groups, mainly those that do not ingest entire fruits. One clear example is parrots, which have been described to use palm species as feeding resources, while their role as seed dispersers has been largely neglected. Here, we combined fieldwork data with information from the literature and citizen science (i.e., naturalists and nature photographers) on parrot foraging ecology worldwide to evaluate the spatial and taxonomic extent of parrot-palm interactions and to identify the eco-evolutionary factors involved. We identified 1,189 interactions between 135 parrots and 107 palm species in more than 50 countries across the six realms where palms are present as natives or introduced. Combining this information, we identified 427 unique parrot-palm interacting pairs (i.e., a parrot species interacting with a palm species). Pure antagonistic interactions (i.e., parrots just preying on seeds or eating or destroying their non-reproductive parts) were less common (5%) than mutualistic ones (i.e., parrots benefiting by partially preying on the seed or fruit or consuming the pulp of the fruit or the flower but also contributing to seed dispersal and, potentially, pollination; 89%). After controlling for phylogeny, the size of consumed seeds and parrot body mass were positively related. Seed dispersal distances varied among palm species (range of estimated median dispersal distances: 9–250 m), with larger parrots dispersing seeds at greater distances, especially large fruits commonly categorized as megafauna anachronisms (>4 cm length). Although parrot-palm interactions are widespread, several factors (e.g., social behavior, predation fear, food availability, or seasonality) may affect the actual position of parrots on the antagonism-mutualism continuum for different palm species and regions, deserving further research. Meanwhile, the pervasiveness of parrot-palm mutualistic interactions, mainly involving seed dispersal and pollination, should not be overlooked in studies of palm ecology and evolution.
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29
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Vitorino BD, Frota AVBD, Maruyama PK, Nunes JRDS, Vizentin-Bugoni J. Influence of sampling methods on the description of a Neotropical seed dispersal network. ACTA OECOLOGICA 2022. [DOI: 10.1016/j.actao.2021.103805] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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30
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Response of avian and mammal seed dispersal networks to human-induced forest edges in a sub-humid tropical forest. JOURNAL OF TROPICAL ECOLOGY 2022. [DOI: 10.1017/s0266467422000062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Abstract
Species-rich ecosystems as tropical forests are extremely vulnerable to anthropogenic destruction. Most tropical plant species rely on animals to disperse their seeds. However, patterns of mutualistic interactions have rarely been explored, and seed dispersal networks are still poorly studied in Africa. Here, we examine how forest edges’ (FE) seed dispersal networks differ from the mature forest (MF) at a West African sub-humid tropical forest within the National Park of Cantanhez (Guinea-Bissau). Additionally, we explore species’ roles within the network. MF had higher fruit availability, more frugivore visitors, and plant–frugivore interactions. Network structure was quite similar between habitats, showing signs of redundancy, and some robustness to species’ extinction. FE was more nested, modular, and specialized, whereas MF had higher connectance, interaction evenness, and robustness to extinction. Most species were generalists, but large-bodied frugivores prevailed at MF. FE showed a higher vulnerability, mostly to the loss of trees. Trees are key, keeping the structure of both networks. Large-bodied frugivores and fruiting-tree species that work as network connectors should thus be the focus of active conservation management in these forests. Only viable populations of these species will ensure a good performance of the seed dispersal network, promoting the natural regeneration of the ecosystem.
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31
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Strydom T, Bouskila S, Banville F, Barros C, Caron D, Farrell MJ, Fortin M, Hemming V, Mercier B, Pollock LJ, Runghen R, Dalla Riva GV, Poisot T. Food web reconstruction through phylogenetic transfer of low‐rank network representation. Methods Ecol Evol 2022. [DOI: 10.1111/2041-210x.13835] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tanya Strydom
- Département de Sciences Biologiques Université de Montréal Montréal Canada
- Quebec Centre for Biodiversity Science Montréal Canada
| | - Salomé Bouskila
- Département de Sciences Biologiques Université de Montréal Montréal Canada
| | - Francis Banville
- Département de Sciences Biologiques Université de Montréal Montréal Canada
- Quebec Centre for Biodiversity Science Montréal Canada
- Département de Biologie Université de Sherbrooke Sherbrooke Canada
| | - Ceres Barros
- Department of Forest Resources Management University of British Columbia Vancouver Canada
| | - Dominique Caron
- Quebec Centre for Biodiversity Science Montréal Canada
- Department of Biology McGill University Montréal Canada
| | - Maxwell J. Farrell
- Department of Ecology & Evolutionary Biology University of Toronto Toronto Canada
| | - Marie‐Josée Fortin
- Department of Ecology & Evolutionary Biology University of Toronto Toronto Canada
| | - Victoria Hemming
- Department of Forest and Conservation Sciences University of British Columbia Vancouver Canada
| | - Benjamin Mercier
- Quebec Centre for Biodiversity Science Montréal Canada
- Département de Biologie Université de Sherbrooke Sherbrooke Canada
| | - Laura J. Pollock
- Quebec Centre for Biodiversity Science Montréal Canada
- Department of Biology McGill University Montréal Canada
| | - Rogini Runghen
- Centre for Integrative Ecology, School of Biological Sciences University of Canterbury Canterbury New Zealand
| | - Giulio V. Dalla Riva
- School of Mathematics and Statistics University of Canterbury Canterbury New Zealand
| | - Timothée Poisot
- Département de Sciences Biologiques Université de Montréal Montréal Canada
- Quebec Centre for Biodiversity Science Montréal Canada
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32
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Manca F, Mulà C, Gustafsson C, Mauri A, Roslin T, Thomas DN, Benedetti-Cecchi L, Norkko A, Strona G. Unveiling the complexity and ecological function of aquatic macrophyte-animal networks in coastal ecosystems. Biol Rev Camb Philos Soc 2022; 97:1306-1324. [PMID: 35174616 PMCID: PMC9544924 DOI: 10.1111/brv.12842] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 02/09/2022] [Accepted: 02/09/2022] [Indexed: 11/30/2022]
Abstract
Network theory offers innovative tools to explore the complex ecological mechanisms regulating species associations and interactions. Although interest in ecological networks has grown steadily during the last two decades, the application of network approaches has been unequally distributed across different study systems: while some kinds of interactions (e.g. plant-pollinator and host-parasite) have been extensively investigated, others remain relatively unexplored. Among the latter, aquatic macrophyte-animal associations in coastal environments have been largely neglected, despite their major role in littoral ecosystems. The ubiquity of macrophyte systems, their accessibility and multi-faceted ecological, economical and societal importance make macrophyte-animal systems an ideal subject for ecological network science. In fact, macrophyte-animal networks offer an aquatic counterpart to terrestrial plant-animal networks. In this review, we show how the application of network analysis to aquatic macrophyte-animal associations has the potential to broaden our understanding of how coastal ecosystems function. Network analysis can also provide a key to understanding how such ecosystems will respond to on-going and future threats from anthropogenic disturbance and environmental change. For this, we: (i) identify key issues that have limited the application of network theory and modelling to aquatic animal-macrophyte associations; (ii) illustrate through examples based on empirical data how network analysis can offer new insights on the complexity and functioning of coastal ecosystems; and (iii) provide suggestions for how to design future studies and establish this new research line into network ecology.
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Affiliation(s)
- Federica Manca
- Faculty of Biological and Environmental Sciences, Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65 Viikinkaari 1, Helsinki, 00014, Finland
| | - Clelia Mulà
- Faculty of Biological and Environmental Sciences, Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65 Viikinkaari 1, Helsinki, 00014, Finland
| | - Camilla Gustafsson
- Tvärminne Zoological Station, University of Helsinki, J.A. Palménin tie 260, Hanko, 10900, Finland
| | - Achille Mauri
- Faculty of Biological and Environmental Sciences, Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65 Viikinkaari 1, Helsinki, 00014, Finland
| | - Tomas Roslin
- Department of Ecology, Swedish University of Agricultural Sciences, Ulls väg 16, Uppsala, 756 51, Sweden.,Spatial Foodweb Ecology Group, Department of Agricultural Sciences, University of Helsinki, PO Box 27 Latokartanonkaari 5, Helsinki, 00014, Finland
| | - David N Thomas
- Faculty of Biological and Environmental Sciences, Ecosystems and Environment Research Programme, University of Helsinki, PO Box 65 Viikinkaari 1, Helsinki, 00014, Finland
| | | | - Alf Norkko
- Tvärminne Zoological Station, University of Helsinki, J.A. Palménin tie 260, Hanko, 10900, Finland.,Baltic Sea Centre, Stockholm University, Svante Arrhenius väg 20 F, Stockholm, 106 91, Sweden
| | - Giovanni Strona
- Faculty of Biological and Environmental Sciences, Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65 Viikinkaari 1, Helsinki, 00014, Finland.,Research Centre for Ecological Change, Organismal and Evolutionary Biology Research Programme, University of Helsinki, PO Box 65 Viikinkaari 1, Helsinki, 00014, Finland
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33
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Fuzessy L, Sobral G, Carreira D, Rother DC, Barbosa G, Landis M, Galetti M, Dallas T, Cardoso Cláudio V, Culot L, Jordano P. Functional roles of frugivores and plants shape hyper‐diverse mutualistic interactions under two antagonistic conservation scenarios. Biotropica 2022. [DOI: 10.1111/btp.13065] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lisieux Fuzessy
- São Paulo State University UNESP Rio Claro SP Brazil
- Estación Biológica de Doñana EBD‐CSIC Sevilla Spain
| | | | - Daiane Carreira
- University of São Paulo Escola Superior de Agricultura "Luiz de Queiroz" Esalq USP Piracicaba SP Brazil
| | - Débora Cristina Rother
- University of São Paulo USP São Paulo SP Brazil
- University of São Paulo Escola Superior de Agricultura "Luiz de Queiroz" Esalq USP Piracicaba SP Brazil
| | | | | | - Mauro Galetti
- São Paulo State University UNESP Rio Claro SP Brazil
- Department of Biology University of Miami Coral Gables Florida USA
| | - Tad Dallas
- Louisiana State University Baton Rouge Louisiana USA
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34
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Cuff JP, Windsor FM, Tercel MPTG, Kitson JJN, Evans DM. Overcoming the pitfalls of merging dietary metabarcoding into ecological networks. Methods Ecol Evol 2022. [DOI: 10.1111/2041-210x.13796] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Jordan P. Cuff
- School of Natural and Environmental Sciences Newcastle University Newcastle upon Tyne UK
| | - Fredric M. Windsor
- School of Natural and Environmental Sciences Newcastle University Newcastle upon Tyne UK
| | - Maximillian P. T. G. Tercel
- School of Biosciences Cardiff University Cardiff UK
- Durrell Wildlife Conservation Trust Jersey Channel Islands
| | - James J. N. Kitson
- School of Natural and Environmental Sciences Newcastle University Newcastle upon Tyne UK
| | - Darren M. Evans
- School of Natural and Environmental Sciences Newcastle University Newcastle upon Tyne UK
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35
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Caron D, Maiorano L, Thuiller W, Pollock LJ. Addressing the Eltonian shortfall with trait-based interaction models. Ecol Lett 2022; 25:889-899. [PMID: 35032411 DOI: 10.1111/ele.13966] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Revised: 12/03/2021] [Accepted: 01/03/2022] [Indexed: 12/16/2022]
Abstract
We have very limited knowledge of how species interact in most communities and ecosystems despite trophic relationships being fundamental for linking biodiversity to ecosystem functioning. A promising approach to fill this gap is to predict interactions based on functional traits, but many questions remain about how well we can predict interactions for different taxa, ecosystems and amounts of input data. Here, we built a new traits-based model of trophic interactions for European vertebrates and found that even models calibrated with 0.1% of the interactions (100 out of 71 k) estimated the full European vertebrate food web reasonably well. However, predators were easier to predict than prey, especially for some clades (e.g. fowl and storks) and local food web connectance was consistently overestimated. Our results demonstrate the ability to rapidly generate food webs when empirical data are lacking-an important step towards a more complete and spatially explicit description of food webs.
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Affiliation(s)
- Dominique Caron
- Department of Biology, McGill University, Montreal, QC, Canada.,Quebec Centre for Biodiversity Sciences, Montreal, QC, Canada
| | - Luigi Maiorano
- Department of Biology and Biotechnologies "Charles Darwin", Sapienza University of Rome, Rome, Italy
| | - Wilfried Thuiller
- Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, Laboratoire d'Ecologie Alpine, Grenoble, France
| | - Laura J Pollock
- Department of Biology, McGill University, Montreal, QC, Canada.,Quebec Centre for Biodiversity Sciences, Montreal, QC, Canada
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36
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Fricke EC, Ordonez A, Rogers HS, Svenning JC. The effects of defaunation on plants' capacity to track climate change. Science 2022; 375:210-214. [PMID: 35025640 DOI: 10.1126/science.abk3510] [Citation(s) in RCA: 66] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Half of all plant species rely on animals to disperse their seeds. Seed dispersal interactions lost through defaunation and gained during novel community assembly influence whether plants can adapt to climate change through migration. We develop trait-based models to predict pairwise interactions and dispersal function for fleshy-fruited plants globally. Using interactions with introduced species as an observable proxy for interactions in future novel seed dispersal networks, we find strong potential to forecast their assembly and functioning. We conservatively estimate that mammal and bird defaunation has already reduced the capacity of plants to track climate change by 60% globally. This strong reduction in the ability of plants to adapt to climate change through range shifts shows a synergy between defaunation and climate change that undermines vegetation resilience.
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Affiliation(s)
- Evan C Fricke
- National Socio-Environmental Synthesis Center, University of Maryland, Annapolis, MD 21401, USA.,Department of BioSciences, Rice University, Houston, TX 77005, USA
| | - Alejandro Ordonez
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark
| | - Haldre S Rogers
- Department of Ecology and Evolutionary Biology, Iowa State University, Ames, IA 50011, USA
| | - Jens-Christian Svenning
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark
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37
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Ropars L, Affre L, Thébault É, Geslin B. Seasonal dynamics of competition between honey bees and wild bees in a protected Mediterranean scrubland. OIKOS 2022. [DOI: 10.1111/oik.08915] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lise Ropars
- IMBE, Aix Marseille Univ., Avignon Univ., CNRS, IRD Marseille France
| | - Laurence Affre
- IMBE, Aix Marseille Univ., Avignon Univ., CNRS, IRD Marseille France
| | - Élisa Thébault
- CNRS, Sorbonne Univ., Inst. of Ecology and Environmental Sciences of Paris Paris France
| | - Benoît Geslin
- IMBE, Aix Marseille Univ., Avignon Univ., CNRS, IRD Marseille France
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38
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Hutchinson MC, Dobson AP, Pringle RM. Dietary abundance distributions: Dominance and diversity in vertebrate diets. Ecol Lett 2021; 25:992-1008. [PMID: 34967090 DOI: 10.1111/ele.13948] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 08/08/2021] [Accepted: 11/23/2021] [Indexed: 01/31/2023]
Abstract
Diet composition is among the most important yet least understood dimensions of animal ecology. Inspired by the study of species abundance distributions (SADs), we tested for generalities in the structure of vertebrate diets by characterising them as dietary abundance distributions (DADs). We compiled data on 1167 population-level diets, representing >500 species from six vertebrate classes, spanning all continents and oceans. DADs near-universally (92.5%) followed a hollow-curve shape, with scant support for other plausible rank-abundance-distribution shapes. This strong generality is inherently related to, yet incompletely explained by, the SADs of available food taxa. By quantifying dietary generalisation as the half-saturation point of the cumulative distribution of dietary abundance (sp50, minimum number of foods required to account for 50% of diet), we found that vertebrate populations are surprisingly specialised: in most populations, fewer than three foods accounted for at least half the diet. Variation in sp50 was strongly associated with consumer type, with carnivores being more specialised than herbivores or omnivores. Other methodological (sampling method and effort, taxonomic resolution), biological (body mass, frugivory) and biogeographic (latitude) factors influenced sp50 to varying degrees. Future challenges include identifying the mechanisms underpinning the hollow-curve DAD, its generality beyond vertebrates, and the biological determinants of dietary generalisation.
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Affiliation(s)
- Matthew C Hutchinson
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, USA.,Institute of Evolutionary Biology and Environmental Studies, Universität Zürich, Zürich, Switzerland
| | - Andrew P Dobson
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, USA
| | - Robert M Pringle
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey, USA
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39
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Friedemann P, Côrtes MC, de Castro ER, Galetti M, Jordano P, Guimarães Jr PR. The individual‐based network structure of palm‐seed dispersers is explained by a rainforest gradient. OIKOS 2021. [DOI: 10.1111/oik.08384] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Pâmela Friedemann
- Depto de Ecologia, Inst. de Biociências, Univ. de São Paulo São Paulo Brazil
| | - Marina Corrêa Côrtes
- Depto de Biodiversidade, Inst. de Biociências, Univ. Estadual Paulista (UNESP) São Paulo Brazil
| | | | - Mauro Galetti
- Depto de Biodiversidade, Inst. de Biociências, Univ. Estadual Paulista (UNESP) São Paulo Brazil
- Dept of Biology, Univ. of Miami Coral Gables FL USA
| | - Pedro Jordano
- Estación Biológica de Doñana, Consejo Superior de Investigaciones Científicas (EBD‐CSIC) Seville Spain
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40
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Mata VA, da Silva LP, Veríssimo J, Horta P, Raposeira H, McCracken GF, Rebelo H, Beja P. Combining DNA metabarcoding and ecological networks to inform conservation biocontrol by small vertebrate predators. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2021; 31:e02457. [PMID: 34529299 PMCID: PMC9285058 DOI: 10.1002/eap.2457] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Revised: 04/22/2021] [Accepted: 05/20/2021] [Indexed: 06/04/2023]
Abstract
In multifunctional landscapes, diverse communities of flying vertebrate predators provide vital services of insect pest control. In such landscapes, conservation biocontrol should benefit service-providing species to enhance the flow, stability and resilience of pest control services supporting the production of food and fiber. However, this would require identifying key service providers, which may be challenging when multiple predators interact with multiple pests. Here we provide a framework to identify the functional role of individual species to pest control in multifunctional landscapes. First, we used DNA metabarcoding to provide detailed data on pest species predation by diverse predator communities. Then, these data were fed into an extensive network analysis, in which information relevant for conservation biocontrol is gained from parameters describing network structure (e.g., modularity) and species roles in such network (e.g., centrality, specialization). We applied our framework to a Mediterranean landscape, where 19 bat species were found to feed on 132 insect pest species. Metabarcoding data revealed potentially important bats that consumed insect pest species in high frequency and/or diversity. Network analysis showed a modular structure, indicating sets of bat species that are required to regulate specific sets of insect pests. A few generalist bats had particularly important roles, either at network or module levels. Extinction simulations highlighted six bats, including species of conservation concern, which were sufficient to ensure that over three-quarters of the pest species had at least one bat predator. Combining DNA metabarcoding and ecological network analysis provides a valuable framework to identify individual species within diverse predator communities that might have a disproportionate contribution to pest control services in multifunctional landscapes. These species can be regarded as candidate targets for conservation biocontrol, although additional information is needed to evaluate their actual effectiveness in pest regulation.
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Affiliation(s)
- Vanessa A. Mata
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
| | - Luis P. da Silva
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
| | - Joana Veríssimo
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- Departamento de Biologia, Faculdade de CiênciasUniversidade do PortoPorto4099‐002Portugal
| | - Pedro Horta
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- Departamento de Biologia, Faculdade de CiênciasUniversidade do PortoPorto4099‐002Portugal
| | - Helena Raposeira
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- Departamento de Biologia, Faculdade de CiênciasUniversidade do PortoPorto4099‐002Portugal
| | - Gary F. McCracken
- Department of Ecology and Evolutionary BiologyUniversity of TennesseeKnoxvilleTennessee37996‐1610USA
| | - Hugo Rebelo
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoInstituto Superior de Agronomia, Universidade de LisboaLisboa1349‐017Portugal
| | - Pedro Beja
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoInstituto Superior de Agronomia, Universidade de LisboaLisboa1349‐017Portugal
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41
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Ollivier M, Lesieur V, Tavoillot J, Bénetière F, Tixier M, Martin J. An innovative approach combining metabarcoding and ecological interaction networks for selecting candidate biological control agents. J Appl Ecol 2021. [DOI: 10.1111/1365-2664.14016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mélodie Ollivier
- CBGP Montpellier SupAgro INRAE CIRAD IRD Univ Montpellier Montpellier France
| | - Vincent Lesieur
- CBGP Montpellier SupAgro INRAE CIRAD IRD Univ Montpellier Montpellier France
- CSIRO Health and Biosecurity European Laboratory Montferrier sur Lez France
| | - Johannes Tavoillot
- CBGP IRD CIRAD INRAE Montpellier SupAgro Univ Montpellier Montpellier France
| | - Fanny Bénetière
- CBGP Montpellier SupAgro INRAE CIRAD IRD Univ Montpellier Montpellier France
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42
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da Silva Goldas C, Podgaiski LR, Veronese Corrêa da Silva C, Abreu Ferreira PM, Vizentin-Bugoni J, de Souza Mendonça M. Structural resilience and high interaction dissimilarity of plant-pollinator interaction networks in fire-prone grasslands. Oecologia 2021; 198:179-192. [PMID: 34773161 DOI: 10.1007/s00442-021-05071-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2021] [Accepted: 10/26/2021] [Indexed: 11/29/2022]
Abstract
Fire is a frequent disturbance in most grasslands around the world, being key for the structure and dynamics of the biodiversity in such ecosystems. While grassland species may be resilient, little is known on how plant-pollinator networks reassemble after fire. Here, we investigate the structure and dynamics of plant-pollinator networks and the variation in species roles over a 2-year post-fire chronosequence on grassland communities in Southern Brazil. We found that both network specialization and modularity were similar over the chronosequence of time-since-fire, but in freshly burnt areas, there were more species acting as network hubs. Species roles exhibited high variation, with plant and pollinator species shifting roles along the post-disturbance chronosequence. Interaction dissimilarity was remarkably high in networks irrespective of times-since-fire. Interaction dissimilarity was associated more with rewiring than with species turnover, indicating that grassland plant and pollinator species are highly capable of switching partners. Time-since-fire had little influence on network structure but influenced the identity and diversity of pollinators playing key roles in the networks. These findings suggest that pollination networks in naturally fire-prone ecosystems are highly dynamic and resilient to fire with both plants and pollinators being highly capable of adjusting their interactions and network structure after disturbance.
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Affiliation(s)
- Camila da Silva Goldas
- Laboratório de Ecologia de Interações, Departamento de Ecologia, Universidade Federal do Rio Grande do Sul, UFRGS, Avenida Bento Gonçalves 9500, Porto Alegre, Rio Grande do Sul, 91540-000, Brazil.
| | - Luciana Regina Podgaiski
- Laboratório de Ecologia de Interações, Departamento de Ecologia, Universidade Federal do Rio Grande do Sul, UFRGS, Avenida Bento Gonçalves 9500, Porto Alegre, Rio Grande do Sul, 91540-000, Brazil
| | - Carolina Veronese Corrêa da Silva
- Laboratório de Ecologia de Interações, Departamento de Ecologia, Universidade Federal do Rio Grande do Sul, UFRGS, Avenida Bento Gonçalves 9500, Porto Alegre, Rio Grande do Sul, 91540-000, Brazil
| | - Pedro Maria Abreu Ferreira
- Laboratório de Ecologia de Interações, Pontifícia Universidade Católica do Rio Grande do Sul, PUCRS, Avenida Ipiranga 6681, Porto Alegre, Rio Grande do Sul, 90619-900, Brazil
| | - Jeferson Vizentin-Bugoni
- Programa de Pós-Graduação Em Ecologia, Universidade Federal do Rio Grande do Sul, UFRGS, Avenida Bento Gonçalves 9500, Porto Alegre, Rio Grande do Sul, 91540-000, Brazil
| | - Milton de Souza Mendonça
- Laboratório de Ecologia de Interações, Departamento de Ecologia, Universidade Federal do Rio Grande do Sul, UFRGS, Avenida Bento Gonçalves 9500, Porto Alegre, Rio Grande do Sul, 91540-000, Brazil
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43
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Strydom T, Catchen MD, Banville F, Caron D, Dansereau G, Desjardins-Proulx P, Forero-Muñoz NR, Higino G, Mercier B, Gonzalez A, Gravel D, Pollock L, Poisot T. A roadmap towards predicting species interaction networks (across space and time). Philos Trans R Soc Lond B Biol Sci 2021; 376:20210063. [PMID: 34538135 PMCID: PMC8450634 DOI: 10.1098/rstb.2021.0063] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/29/2021] [Indexed: 11/12/2022] Open
Abstract
Networks of species interactions underpin numerous ecosystem processes, but comprehensively sampling these interactions is difficult. Interactions intrinsically vary across space and time, and given the number of species that compose ecological communities, it can be tough to distinguish between a true negative (where two species never interact) from a false negative (where two species have not been observed interacting even though they actually do). Assessing the likelihood of interactions between species is an imperative for several fields of ecology. This means that to predict interactions between species-and to describe the structure, variation, and change of the ecological networks they form-we need to rely on modelling tools. Here, we provide a proof-of-concept, where we show how a simple neural network model makes accurate predictions about species interactions given limited data. We then assess the challenges and opportunities associated with improving interaction predictions, and provide a conceptual roadmap forward towards predictive models of ecological networks that is explicitly spatial and temporal. We conclude with a brief primer on the relevant methods and tools needed to start building these models, which we hope will guide this research programme forward. This article is part of the theme issue 'Infectious disease macroecology: parasite diversity and dynamics across the globe'.
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Affiliation(s)
- Tanya Strydom
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | - Michael D. Catchen
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Francis Banville
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- Université de Sherbrooke, Sherbrooke, Canada
| | - Dominique Caron
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Gabriel Dansereau
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | - Philippe Desjardins-Proulx
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | - Norma R. Forero-Muñoz
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | | | - Benjamin Mercier
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- Université de Sherbrooke, Sherbrooke, Canada
| | - Andrew Gonzalez
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Dominique Gravel
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- Université de Sherbrooke, Sherbrooke, Canada
| | - Laura Pollock
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Timothée Poisot
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
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44
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McLeod A, Leroux SJ, Gravel D, Chu C, Cirtwill AR, Fortin M, Galiana N, Poisot T, Wood SA. Sampling and asymptotic network properties of spatial multi‐trophic networks. OIKOS 2021. [DOI: 10.1111/oik.08650] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Anne McLeod
- Dept of Biology, Memorial Univ. of Newfoundland St. John's NL Canada
| | - Shawn J. Leroux
- Dept of Biology, Memorial Univ. of Newfoundland St. John's NL Canada
| | | | - Cindy Chu
- Aquatic Research and Monitoring Section, Ontario Ministry of Natural Resources and Forestry Peterborough ON Canada
- Great Lakes Laboratory for Fisheries and Aquatic Sciences, Fisheries and Oceans Canada Burlington ON Canada
| | | | - Marie‐Josée Fortin
- Dept of Ecology and Evolutionary Biology, Univ. of Toronto Toronto ON Canada
| | - Núria Galiana
- Theoretical and Experimental Ecology Station, CNRS and Paul Sabatier Univ. Moulis France
| | - Timothée Poisot
- Dépt de Sciences Biologiques, Univ. de Montréal Montréal QC Canada
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45
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Fantinato E, Sonkoly J, Török P, Buffa G. Patterns of pollination interactions at the community level are related to the type and quantity of floral resources. Funct Ecol 2021. [DOI: 10.1111/1365-2435.13915] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Edy Fantinato
- Department of Environmental Sciences, Informatics and Statistics University Ca' Foscari of Venice Venice Italy
| | - Judit Sonkoly
- Department of Ecology University of Debrecen Debrecen Hungary
- MTA‐DE Lendület Functional and Restoration Ecology Research Group Debrecen Hungary
| | - Péter Török
- Department of Ecology University of Debrecen Debrecen Hungary
- MTA‐DE Lendület Functional and Restoration Ecology Research Group Debrecen Hungary
- Polish Academy of Sciences Botanical Garden ‐ Center for Biological Diversity Conservation in Powsin Warszawa Poland
| | - Gabriella Buffa
- Department of Environmental Sciences, Informatics and Statistics University Ca' Foscari of Venice Venice Italy
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46
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Librán-Embid F, Grass I, Emer C, Ganuza C, Tscharntke T. A plant-pollinator metanetwork along a habitat fragmentation gradient. Ecol Lett 2021; 24:2700-2712. [PMID: 34612562 DOI: 10.1111/ele.13892] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 04/25/2021] [Accepted: 08/27/2021] [Indexed: 11/29/2022]
Abstract
To understand how plant-pollinator interactions respond to habitat fragmentation, we need novel approaches that can capture properties that emerge at broad scales, where multiple communities engage in metanetworks. Here we studied plant-pollinator interactions over 2 years on 29 calcareous grassland fragments selected along independent gradients of habitat size and surrounding landscape diversity of cover types. We associated network centrality of plant-pollinator interactions and grassland fragments with their ecological and landscape traits, respectively. Interactions involving habitat specialist plants and large-bodied pollinators were the most central, implying that species with these traits form the metanetwork core. Large fragments embedded in landscapes with high land cover diversity exhibited the highest centrality; however, small fragments harboured many unique interactions not found on larger fragments. Intensively managed landscapes have reached a point in which all remaining fragments matter, meaning that losing any further areas may vanish unique interactions with unknown consequences for ecosystem functioning.
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Affiliation(s)
- Felipe Librán-Embid
- Agroecology, University of Göttingen, Göttingen, Germany.,Zoological Biodiversity, Institute of Geobotany, Leibniz University of Hannover, Hannover, Germany
| | - Ingo Grass
- Department of Ecology of Tropical Agricultural Systems, University of Hohenheim, Stuttgart, Germany
| | - Carine Emer
- Instituto de Biociências, Departamento de Ecologia, Universidade Estadual Paulista, Rio Claro, SP, Brazil.,Departamento de Botânica, Universidade Federal de Pernambuco, Recife, PE, Brazil
| | - Cristina Ganuza
- Department of Animal Ecology and Tropical Biology, University of Würzburg, Würzburg, Germany
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47
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Borchardt KE, Morales CL, Aizen MA, Toth AL. Plant-pollinator conservation from the perspective of systems-ecology. CURRENT OPINION IN INSECT SCIENCE 2021; 47:154-161. [PMID: 34325080 DOI: 10.1016/j.cois.2021.07.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 07/12/2021] [Accepted: 07/15/2021] [Indexed: 06/13/2023]
Abstract
Ecosystems are interconnected and complex, but conservation has often focused on rehabilitating individual species. A systems-ecology approach aims to support overall structure and maintain functions of the whole ecosystem, and may be especially pertinent for mutualistic plant-pollinator communities. This approach focuses on species interactions as the units to be conserved within the larger ecosystem. Analyzing species interactions is a more holistic approach because it incorporates a broader web of organisms, and considers the plethora of potential indirect influences from interacting partners. In this article, we suggest pollinator researchers focus on plant-pollinator networks to inform conservation programs and best support the coexistence of pollinators and plants within natural and agricultural systems. We propose that a system-ecology perspective is the most promising way to simultaneously improve pollinator conservation, agricultural sustainability, and human well-being.
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Affiliation(s)
- Kate E Borchardt
- Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA.
| | - Carolina L Morales
- Grupo de Ecología de la Polinización, INIBIOMA, Universidad Nacional del Comahue-CONICET, Bariloche, Río Negro, 8400, Argentina
| | - Marcelo A Aizen
- Grupo de Ecología de la Polinización, INIBIOMA, Universidad Nacional del Comahue-CONICET, Bariloche, Río Negro, 8400, Argentina; Wissenschaftskolleg zu Berlin, 14193, Berlin, Germany
| | - Amy L Toth
- Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA; Department of Entomology, Iowa State University, Ames, IA, 50011, USA.
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48
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Glaum P, Wood TJ, Morris JR, Valdovinos FS. Phenology and flowering overlap drive specialisation in plant-pollinator networks. Ecol Lett 2021; 24:2648-2659. [PMID: 34532944 DOI: 10.1111/ele.13884] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Revised: 08/05/2021] [Accepted: 08/21/2021] [Indexed: 11/30/2022]
Abstract
Variation in dietary specialisation stems from fundamental interactions between species and their environment. Consequently, understanding the drivers of this variation is key to understanding ecological and evolutionary processes. Dietary specialisation in wild bees has received attention due to their close mutualistic dependence on plants, and because both groups are threatened by biodiversity loss. Many principles governing pollinator specialisation have been identified, but they remain largely unvalidated. Organismal phenology has the potential to structure realised specialisation by determining concurrent resource availability and pollinator foraging activity. We evaluate this principle using mechanistic models of adaptive foraging in pollinators within plant-pollinator networks. While temporal resource overlap has little impact on specialisation in pollinators with extended flight periods, reduced overlap increases specialisation as pollinator flight periods decrease. These results are corroborated empirically using pollen load data taken from bees with shorter and longer flight periods across environments with high and low temporal resource overlap.
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Affiliation(s)
- Paul Glaum
- Department of Environmental Science and Policy, University of California-Davis, Davis, California, USA.,Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
| | - Thomas J Wood
- Laboratory of Zoology, University of Mons, Mons, Belgium
| | - Jonathan R Morris
- School for Environment and Sustainability, University of Michigan, Ann Arbor, Michigan, USA
| | - Fernanda S Valdovinos
- Department of Environmental Science and Policy, University of California-Davis, Davis, California, USA.,Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, USA
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49
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Heleno RH, Mendes F, Coelho AP, Ramos JA, Palmeirim JM, Rainho A, de Lima RF. The upsizing of the São Tomé seed dispersal network by introduced animals. OIKOS 2021. [DOI: 10.1111/oik.08279] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Ruben H. Heleno
- Centre for Functional Ecology (CFE‐UC), Dept of Life Sciences, Univ. of Coimbra, Calçada Martim de Freitas Coimbra Portugal
| | - Filipa Mendes
- Centre for Functional Ecology (CFE‐UC), Dept of Life Sciences, Univ. of Coimbra, Calçada Martim de Freitas Coimbra Portugal
| | - Ana P. Coelho
- Centre for Ecology, Evolution and Environmental Changes (cE3c) and Dept of Animal Biology, Faculty of Sciences, Univ. of Lisbon Lisboa Portugal
- Dept of Biology and CESAM, Univ. of Aveiro, Campus de Santiago Aveiro Portugal
| | - Jaime A. Ramos
- Centre for Ecology, Evolution and Environmental Changes (cE3c) and Dept of Animal Biology, Faculty of Sciences, Univ. of Lisbon Lisboa Portugal
| | - Jorge M. Palmeirim
- Marine and Environmental Sciences Centre (MARE), Dept of Life Sciences, Univ. of Coimbra Coimbra Portugal
| | - Ana Rainho
- Centre for Ecology, Evolution and Environmental Changes (cE3c) and Dept of Animal Biology, Faculty of Sciences, Univ. of Lisbon Lisboa Portugal
| | - Ricardo F. de Lima
- Centre for Ecology, Evolution and Environmental Changes (cE3c) and Dept of Animal Biology, Faculty of Sciences, Univ. of Lisbon Lisboa Portugal
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50
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Guimarães MM, Souza CS, Sigrist MR, Miliato KBM, Maia FRD. Assessment of interactions between oil flowers and floral visitors in world biomes. Biol J Linn Soc Lond 2021. [DOI: 10.1093/biolinnean/blab078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Abstract
Abstract
Specialized glands that produce and store floral oil are found in 11 families of flowering plants, with greater representation in Malpighiaceae. Solitary bees use this resource to feed larvae and for cell lining. Oil interactions have been reported mainly at the population level and in some community studies that have commonly ignored not only the fewer representative families of oil-offering flowers, but also the floral visitors that do not collect floral oil. We have compiled and examined the interactions between oil-offering flowers and floral visitors in world biomes, to describe the structural patterns of the oil interaction meta-network and evaluate the species' functional roles. We reviewed 169 studies, which mainly used a phytocentric approach, reporting 1460 interactions between 214 species of oil-offering flowers and 377 species of floral visitors. Malpighiaceae and bees (mainly oil-collecting bees) were the most frequently investigated. The meta-network of oil interactions showed a modular structure, mainly influenced by botanical families, and core–periphery organization. The most important functional roles were associated with Malpighiaceae and oil-collecting bees, possibly due to their representativeness and geographic distribution.
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Affiliation(s)
- Murilo Menck Guimarães
- Programa de Pós-Graduação em Botânica, Departamento de Biologia, Universidade Federal do Paraná, Curitiba, PR, Brazil
| | - Camila Silveira Souza
- Programa de Pós-Graduação em Botânica, Departamento de Biologia, Universidade Federal do Paraná, Curitiba, PR, Brazil
| | - Maria Rosângela Sigrist
- Laboratório de Polinização, Reprodução e Fenologia de Plantas, InBio, Universidade Federal de Mato Grosso do Sul, Campo Grande, MS, Brazil
| | - Karina Back Militão Miliato
- Programa de Pós-Graduação em Biologia Vegetal, Laboratório de Polinização, Reprodução e Fenologia de Plantas, InBio, Universidade Federal de Mato Grosso do Sul, Campo Grande, MS, Brazil
| | - Fabiano Rodrigo da Maia
- Programa de Pós-Graduação em Botânica, Departamento de Biologia, Universidade Federal do Paraná, Curitiba, PR, Brazil
- Departamento de Biologia Geral, Laboratório de Morfoanatomia e Fisiologia Vegetal, Universidade Estadual de Ponta Grossa, Ponta Grossa, PR, Brazil
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