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Hussain ST, Baumann C. The human side of biodiversity: coevolution of the human niche, palaeo-synanthropy and ecosystem complexity in the deep human past. Philos Trans R Soc Lond B Biol Sci 2024; 379:20230021. [PMID: 38583478 PMCID: PMC10999276 DOI: 10.1098/rstb.2023.0021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 12/18/2023] [Indexed: 04/09/2024] Open
Abstract
Today's biodiversity crisis fundamentally threatens the habitability of the planet, thus ranking among the primary human challenges of our time. Much emphasis is currently placed on the loss of biodiversity in the Anthropocene, yet these debates often portray biodiversity as a purely natural phenomenon without much consideration of its human dimensions and frequently lack long-term vistas. This paper offers a deep-time perspective on the key role of the evolving human niche in ecosystem functioning and biodiversity dynamics. We summarize research on past hunter-gatherer ecosystem contributions and argue that human-environment feedback systems with important biodiversity consequences are probably a recurrent feature of the Late Pleistocene, perhaps with even deeper roots. We update current understandings of the human niche in this light and suggest that the formation of palaeo-synanthropic niches in other animals proffers a powerful model system to investigate recursive interactions of foragers and ecosystems. Archaeology holds important knowledge here and shows that ecosystem contributions vary greatly in relation to different human lifeways, some of which are lost today. We therefore recommend paying more attention to the intricate relationship between biodiversity and cultural diversity, contending that promotion of the former depends on fostering the latter. This article is part of the theme issue 'Ecological novelty and planetary stewardship: biodiversity dynamics in a transforming biosphere'.
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Affiliation(s)
- Shumon T. Hussain
- MESH – Center for Multidisciplinary Environmental Studies in the Humanities & Institute of Prehistoric Archaeology, University of Cologne, Weyertal 59, 50937 Cologne, Germany
- Department of Archaeology and Heritage Studies, Aarhus University, Moesgård Allé 20, 8270 Højbjerg, Denmark
- BIOCHANGE – Center for Biodiversity Dynamics in a Changing World, Department of Biology, Aarhus University, Ny Munkegade 116, 8000 Aarhus C, Denmark
| | - Chris Baumann
- Biogeology Research Group, Department of Geosciences, University of Tübingen, Hölderlinstrasse 12, 72074 Tübingen, Germany
- Department of Geosciences and Geography, University of Helsinki, PL 64 (Gustaf Hällströmin katu 2), 00014 Helsinki, Finland
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2
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Svenning JC, Buitenwerf R, Le Roux E. Trophic rewilding as a restoration approach under emerging novel biosphere conditions. Curr Biol 2024; 34:R435-R451. [PMID: 38714176 DOI: 10.1016/j.cub.2024.02.044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/09/2024]
Abstract
Rewilding is a restoration approach that aims to promote self-regulating complex ecosystems by restoring non-human ecological processes while reducing human control and pressures. Rewilding is forward-looking in that it aims to enhance functionality for biodiversity, accepting and indeed promoting the dynamic nature of ecosystems, rather than fixating on static composition or structure. Rewilding is thus especially relevant in our epoch of increasingly novel biosphere conditions, driven by strong human-induced global change. Here, we explore this hypothesis in the context of trophic rewilding - the restoration of trophic complexity mediated by wild, large-bodied animals, known as 'megafauna'. This focus reflects the strong ecological impacts of large-bodied animals, their widespread loss during the last 50,000 years and their high diversity and ubiquity in the preceding 50 million years. Restoring abundant, diverse, wild-living megafauna is expected to promote vegetation heterogeneity, seed dispersal, nutrient cycling and biotic microhabitats. These are fundamental drivers of biodiversity and ecosystem function and are likely to gain importance for maintaining a biodiverse biosphere under increasingly novel ecological conditions. Non-native megafauna species may contribute to these effects as ecological surrogates of extinct species or by promoting ecological functionality within novel assemblages. Trophic rewilding has strong upscaling potential via population growth and expansion of wild fauna. It is likely to facilitate biotic adaptation to changing climatic conditions and resilience to ecosystem collapse, and to curb some negative impacts of globalization, notably the dominance of invasive alien plants. Finally, we discuss the complexities of realizing the biodiversity benefits that trophic rewilding offers under novel biosphere conditions in a heavily populated world.
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Affiliation(s)
- Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark.
| | - Robert Buitenwerf
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark
| | - Elizabeth Le Roux
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark; Department of Zoology and Entomology, Faculty of Natural and Agricultural Sciences, Mammal Research Institute, University of Pretoria, Pretoria 0028, South Africa
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3
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Trepel J, le Roux E, Abraham AJ, Buitenwerf R, Kamp J, Kristensen JA, Tietje M, Lundgren EJ, Svenning JC. Meta-analysis shows that wild large herbivores shape ecosystem properties and promote spatial heterogeneity. Nat Ecol Evol 2024; 8:705-716. [PMID: 38337048 DOI: 10.1038/s41559-024-02327-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Accepted: 01/08/2024] [Indexed: 02/12/2024]
Abstract
Megafauna (animals ≥45 kg) have probably shaped the Earth's terrestrial ecosystems for millions of years with pronounced impacts on biogeochemistry, vegetation, ecological communities and evolutionary processes. However, a quantitative global synthesis on the generality of megafauna effects on ecosystems is lacking. Here we conducted a meta-analysis of 297 studies and 5,990 individual observations across six continents to determine how wild herbivorous megafauna influence ecosystem structure, ecological processes and spatial heterogeneity, and whether these impacts depend on body size and environmental factors. Despite large variability in megafauna effects, we show that megafauna significantly alter soil nutrient availability, promote open vegetation structure and reduce the abundance of smaller animals. Other responses (14 out of 26), including, for example, soil carbon, were not significantly affected. Further, megafauna significantly increase ecosystem heterogeneity by affecting spatial heterogeneity in vegetation structure and the abundance and diversity of smaller animals. Given that spatial heterogeneity is considered an important driver of biodiversity across taxonomic groups and scales, these results support the hypothesis that megafauna may promote biodiversity at large scales. Megafauna declined precipitously in diversity and abundance since the late Pleistocene, and our results indicate that their restoration would substantially influence Earth's terrestrial ecosystems.
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Affiliation(s)
- Jonas Trepel
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark.
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark.
- Department of Conservation Biology, University of Göttingen, Göttingen, Germany.
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark.
| | - Elizabeth le Roux
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark
- Mammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - Andrew J Abraham
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark
- School of Informatics, Computing and Cyber Systems, Northern Arizona University, Flagstaff, AZ, USA
| | - Robert Buitenwerf
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark
| | - Johannes Kamp
- Department of Conservation Biology, University of Göttingen, Göttingen, Germany
| | - Jeppe A Kristensen
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Melanie Tietje
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
| | - Erick J Lundgren
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark.
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark.
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark.
- School of Biology and Environmental Science, Faculty of Science, Queensland University of Technology, Brisbane, Queensland, Australia.
| | - Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus C, Denmark
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He F, Svenning JC, Chen X, Tockner K, Kuemmerle T, le Roux E, Moleón M, Gessner J, Jähnig SC. Freshwater megafauna shape ecosystems and facilitate restoration. Biol Rev Camb Philos Soc 2024. [PMID: 38411930 DOI: 10.1111/brv.13062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 01/31/2024] [Accepted: 02/02/2024] [Indexed: 02/28/2024]
Abstract
Freshwater megafauna, such as sturgeons, giant catfishes, river dolphins, hippopotami, crocodylians, large turtles, and giant salamanders, have experienced severe population declines and range contractions worldwide. Although there is an increasing number of studies investigating the causes of megafauna losses in fresh waters, little attention has been paid to synthesising the impacts of megafauna on the abiotic environment and other organisms in freshwater ecosystems, and hence the consequences of losing these species. This limited understanding may impede the development of policies and actions for their conservation and restoration. In this review, we synthesise how megafauna shape ecological processes in freshwater ecosystems and discuss their potential for enhancing ecosystem restoration. Through activities such as movement, burrowing, and dam and nest building, megafauna have a profound influence on the extent of water bodies, flow dynamics, and the physical structure of shorelines and substrata, increasing habitat heterogeneity. They enhance nutrient cycling within fresh waters, and cross-ecosystem flows of material, through foraging and reproduction activities. Freshwater megafauna are highly connected to other freshwater organisms via direct consumption of species at different trophic levels, indirect trophic cascades, and through their influence on habitat structure. The literature documenting the ecological impacts of freshwater megafauna is not evenly distributed among species, regions, and types of ecological impacts, with a lack of quantitative evidence for large fish, crocodylians, and turtles in the Global South and their impacts on nutrient flows and food-web structure. In addition, population decline, range contraction, and the loss of large individuals have reduced the extent and magnitude of megafaunal impacts in freshwater ecosystems, rendering a posteriori evaluation more difficult. We propose that reinstating freshwater megafauna populations holds the potential for restoring key ecological processes such as disturbances, trophic cascades, and species dispersal, which will, in turn, promote overall biodiversity and enhance nature's contributions to people. Challenges for restoration actions include the shifting baseline syndrome, potential human-megafauna competition for habitats and resources, damage to property, and risk to human life. The current lack of historical baselines for natural distributions and population sizes of freshwater megafauna, their life history, trophic interactions with other freshwater species, and interactions with humans necessitates further investigation. Addressing these knowledge gaps will improve our understanding of the ecological roles of freshwater megafauna and support their full potential for facilitating the development of effective conservation and restoration strategies to achieve the coexistence of humans and megafauna.
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Affiliation(s)
- Fengzhi He
- Key Laboratory of Wetland Ecology and Environment, State Key Laboratory of Black Soils Conservation and Utilization, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Shengbei Street 4888, Changchun, 130102, China
- Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, Berlin, 12587, Germany
- Geography Department, Humboldt-Universität zu Berlin, Unter den Linden 6, Berlin, 10099, Germany
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, Aarhus, 8000, Denmark
| | - Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, Aarhus, 8000, Denmark
| | - Xing Chen
- Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, Berlin, 12587, Germany
- Institute of Biology, Freie Universität Berlin, Königin-Luise-Str. 1-3, Berlin, 14195, Germany
| | - Klement Tockner
- Senckenberg Society for Nature Research, Senckenberganlage 25, Frankfurt am Main, 60325, Germany
- Faculty for Biological Sciences, Goethe University Frankfurt, Max-von-Laue-Straße 9, Frankfurt am Main, 60438, Germany
| | - Tobias Kuemmerle
- Geography Department, Humboldt-Universität zu Berlin, Unter den Linden 6, Berlin, 10099, Germany
| | - Elizabeth le Roux
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, Aarhus, 8000, Denmark
| | - Marcos Moleón
- Department of Zoology, University of Granada, Avenida de Fuente Nueva S/N, Granada, 18071, Spain
| | - Jörn Gessner
- Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, Berlin, 12587, Germany
| | - Sonja C Jähnig
- Leibniz Institute of Freshwater Ecology and Inland Fisheries, Müggelseedamm 310, Berlin, 12587, Germany
- Geography Department, Humboldt-Universität zu Berlin, Unter den Linden 6, Berlin, 10099, Germany
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5
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Zhao Y, Su C, He B, Nie R, Wang Y, Ma J, Song J, Yang Q, Hao J. Dispersal from the Qinghai-Tibet plateau by a high-altitude butterfly is associated with rapid expansion and reorganization of its genome. Nat Commun 2023; 14:8190. [PMID: 38081828 PMCID: PMC10713551 DOI: 10.1038/s41467-023-44023-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2023] [Accepted: 11/28/2023] [Indexed: 12/18/2023] Open
Abstract
Parnassius glacialis is a typical "Out of the QTP" alpine butterfly that originated on the Qinghai-Tibet Plateau (QTP) and dispersed into relatively low-altitude mountainous. Here we assemble a chromosome-level genome of P. glacialis and resequence 9 populations in order to explore the genome evolution and local adaptation of this species. These results indicated that the rapid accumulation and slow unequal recombination of transposable elements (TEs) contributed to the formation of its large genome. Several ribosomal gene families showed extensive expansion and selective evolution through transposon-mediated processed pseudogenes. Additionally, massive structural variations (SVs) of TEs affected the genetic differentiation of low-altitude populations. These low-altitude populations might have experienced a genetic bottleneck in the past and harbor genes with selective signatures which may be responsible for the potential adaptation to low-altitude environments. These results provide a foundation for understanding genome evolution and local adaptation for "Out of the QTP" of P. glacialis.
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Affiliation(s)
- Youjie Zhao
- College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
- College of Big Data and Intelligent Engineering, Southwest Forestry University, Kunming, 650224, Yunnan, China
| | - Chengyong Su
- College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
| | - Bo He
- College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
| | - Ruie Nie
- College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
| | - Yunliang Wang
- College of Life Sciences, Anhui Normal University, Wuhu, 241000, China
| | - Junye Ma
- State Key Laboratory of Palaeobiology and Stratigraphy, Center for Excellence in Life and Palaeoenvironment, Nanjing Institute of Geology and Paleontology, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Jingyu Song
- College of Animal Science, Shandong Agricultural University, Taian, 271000, China
| | - Qun Yang
- State Key Laboratory of Palaeobiology and Stratigraphy, Center for Excellence in Life and Palaeoenvironment, Nanjing Institute of Geology and Paleontology, Chinese Academy of Sciences, Nanjing, 210008, China.
- Nanjing College, University of Chinese Academy of Sciences, Nanjing, 211135, China.
| | - Jiasheng Hao
- College of Life Sciences, Anhui Normal University, Wuhu, 241000, China.
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6
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Bond ML, Lee DE, Paniw M. Extinction risks and mitigation for a megaherbivore, the giraffe, in a human-influenced landscape under climate change. GLOBAL CHANGE BIOLOGY 2023; 29:6693-6712. [PMID: 37819148 DOI: 10.1111/gcb.16970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Revised: 09/20/2023] [Accepted: 09/20/2023] [Indexed: 10/13/2023]
Abstract
Megaherbivores play "outsized" roles in ecosystem functioning but are vulnerable to human impacts such as overhunting, land-use changes, and climate extremes. However, such impacts-and combinations of these impacts-on population dynamics are rarely examined using empirical data. To guide effective conservation actions under increasing global-change pressures, we developed a socially structured individual-based model (IBM) using long-term demographic data from female giraffes (Giraffa camelopardalis) in a human-influenced landscape in northern Tanzania, the Tarangire Ecosystem. This unfenced system includes savanna habitats with a wide gradient of anthropogenic pressures, from national parks, a wildlife ranch and community conservation areas, to unprotected village lands. We then simulated and projected over 50 years how realistic environmental and land-use management changes might affect this metapopulation of female giraffes. Scenarios included: (1) anthropogenic land-use changes including roads and agricultural/urban expansion; (2) reduction or improvement in wildlife law enforcement measures; (3) changes in populations of natural predators and migratory alternative prey; and (4) increases in rainfall as predicted for East Africa. The factor causing the greatest risk of rapid declines in female giraffe abundance in our simulations was a reduction in law enforcement leading to more poaching. Other threats decreased abundances of giraffes, but improving law enforcement in both of the study area's protected areas mitigated these impacts: a 0.01 increase in giraffe survival probability from improved law enforcement mitigated a 25% rise in heavy rainfall events by increasing abundance 19%, and mitigated the expansion of towns and blockage of dispersal movements by increasing abundance 22%. Our IBM enabled us to further quantify fine-scale abundance changes among female giraffe social communities, revealing potential source-sink interactions within the metapopulation. This flexible methodology can be adapted to test additional ecological questions in this landscape, or to model populations of giraffes or other species in different ecosystems.
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Affiliation(s)
- Monica L Bond
- Department of Conservation Biology, Estación Biológica de Doñana (EBD-CSIC), Seville, Spain
- Wild Nature Institute, Concord, New Hampshire, USA
| | - Derek E Lee
- Wild Nature Institute, Concord, New Hampshire, USA
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania, USA
| | - Maria Paniw
- Department of Conservation Biology, Estación Biológica de Doñana (EBD-CSIC), Seville, Spain
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7
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Bergman J, Pedersen RØ, Lundgren EJ, Lemoine RT, Monsarrat S, Pearce EA, Schierup MH, Svenning JC. Worldwide Late Pleistocene and Early Holocene population declines in extant megafauna are associated with Homo sapiens expansion rather than climate change. Nat Commun 2023; 14:7679. [PMID: 37996436 PMCID: PMC10667484 DOI: 10.1038/s41467-023-43426-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Accepted: 11/09/2023] [Indexed: 11/25/2023] Open
Abstract
The worldwide extinction of megafauna during the Late Pleistocene and Early Holocene is evident from the fossil record, with dominant theories suggesting a climate, human or combined impact cause. Consequently, two disparate scenarios are possible for the surviving megafauna during this time period - they could have declined due to similar pressures, or increased in population size due to reductions in competition or other biotic pressures. We therefore infer population histories of 139 extant megafauna species using genomic data which reveal population declines in 91% of species throughout the Quaternary period, with larger species experiencing the strongest decreases. Declines become ubiquitous 32-76 kya across all landmasses, a pattern better explained by worldwide Homo sapiens expansion than by changes in climate. We estimate that, in consequence, total megafauna abundance, biomass, and energy turnover decreased by 92-95% over the past 50,000 years, implying major human-driven ecosystem restructuring at a global scale.
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Affiliation(s)
- Juraj Bergman
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark.
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark.
| | - Rasmus Ø Pedersen
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
| | - Erick J Lundgren
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- School of Biology and Environmental Science, Faculty of Science, Queensland University of Technology, Brisbane, QLD, Australia
| | - Rhys T Lemoine
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
| | - Sophie Monsarrat
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Rewilding Europe, Toernooiveld 1, 6525 ED, Nijmegen, The Netherlands
| | - Elena A Pearce
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
| | - Mikkel H Schierup
- Bioinformatics Research Centre, Aarhus University, DK-8000, Aarhus C, Denmark
| | - Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000, Aarhus C, Denmark
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8
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Wölke FJR, Cabral A, Lim JY, Kissling WD, Onstein RE. Africa as an evolutionary arena for large fruits. THE NEW PHYTOLOGIST 2023; 240:1574-1586. [PMID: 37334569 DOI: 10.1111/nph.19061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 05/14/2023] [Indexed: 06/20/2023]
Abstract
Strong paleoclimatic change and few Late Quaternary megafauna extinctions make mainland Africa unique among continents. Here, we hypothesize that, compared with elsewhere, these conditions created the ecological opportunity for the macroevolution and geographic distribution of large fruits. We assembled global phylogenetic, distribution and fruit size data for palms (Arecaceae), a pantropical, vertebrate-dispersed family with > 2600 species, and integrated these with data on extinction-driven body size reduction in mammalian frugivore assemblages since the Late Quaternary. We applied evolutionary trait, linear and null models to identify the selective pressures that have shaped fruit sizes. We show that African palm lineages have evolved towards larger fruit sizes and exhibited faster trait evolutionary rates than lineages elsewhere. Furthermore, the global distribution of the largest palm fruits across species assemblages was explained by occurrence in Africa, especially under low canopies, and extant megafauna, but not by mammalian downsizing. These patterns strongly deviated from expectations under a null model of stochastic (Brownian motion) evolution. Our results suggest that Africa provided a distinct evolutionary arena for palm fruit size evolution. We argue that megafaunal abundance and the expansion of savanna habitat since the Miocene provided selective advantages for the persistence of African plants with large fruits.
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Affiliation(s)
- Friederike J R Wölke
- Evolution and Adaptation, German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstrasse 4, Leipzig, 04103, Germany
| | - Andressa Cabral
- Evolution and Adaptation, German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstrasse 4, Leipzig, 04103, Germany
| | - Jun Ying Lim
- Department of Biological Sciences, National University of Singapore, Block S16, 6 Science Drive 2, Singapore City, 117546, Singapore
| | - W Daniel Kissling
- Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Sciencepark 904, 1098 XH, Amsterdam, the Netherlands
| | - Renske E Onstein
- Evolution and Adaptation, German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstrasse 4, Leipzig, 04103, Germany
- Naturalis Biodiversity Center, Darwinweg 2, 2333CR, Leiden, the Netherlands
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9
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Koutamanis D, McCurry M, Tacail T, Dosseto A. Reconstructing Pleistocene Australian herbivore megafauna diet using calcium and strontium isotopes. ROYAL SOCIETY OPEN SCIENCE 2023; 10:230991. [PMID: 38026016 PMCID: PMC10663789 DOI: 10.1098/rsos.230991] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/23/2023] [Accepted: 10/09/2023] [Indexed: 12/01/2023]
Abstract
Isotopes in fossil tooth enamel provide robust tools for reconstructing food webs, which have been understudied in Australian megafauna. To delineate the isotopic composition of primary consumers and understand dietary behaviour at the base of the food web, we investigate calcium (Ca) and strontium (Sr) isotope compositions of Pleistocene marsupial herbivores from Wellington Caves and Bingara (New South Wales, Australia). Sr isotopes suggest small home ranges across giant and smaller marsupial herbivores. Ca isotopes in Pleistocene marsupial herbivores cover the same range as those in modern wombats and placental herbivores. Early forming teeth are depleted in heavy Ca isotopes compared to late-forming teeth of a given individual, suggesting a weaning signal. Distinct Ca compositions between taxa can be interpreted as dietary niches. Some niches conform to previous dietary reconstructions of taxa, while others provide new insights into niche differentiation across Australian herbivores. Combined with the small roaming ranges suggested by Sr isotopes, the Ca isotope niche diversity suggests rich ecosystems, supporting a diversity of taxa with various diets in a small area.
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Affiliation(s)
- Dafne Koutamanis
- Wollongong Isotope Geochronology Laboratory, School of Earth, Atmospheric and Life Sciences, University of Wollongong, Wollongong, New South Wales 2522, Australia
- Centre for Archaeological Science, School of Earth, Atmospheric and Life Sciences, University of Wollongong, Wollongong, New South Wales 2522, Australia
| | - Matthew McCurry
- Australian Museum Research Institute, Sydney, New South Wales, Australia
- Earth and Sustainability Science Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Kensington, New South Wales 2052, Australia
- Paleobiology, NMNH, Smithsonian Institution, Washington, DC 20560, USA
| | - Theo Tacail
- Institute of Geosciences, Johannes Gutenberg University, Mainz, Germany
| | - Anthony Dosseto
- Wollongong Isotope Geochronology Laboratory, School of Earth, Atmospheric and Life Sciences, University of Wollongong, Wollongong, New South Wales 2522, Australia
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10
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Cortés-Díaz D, Buitrago-Torres DL, Restrepo-Cardona JS, Estellés-Domingo I, López-López P. Bridging Evolutionary History and Conservation of New World Vultures. Animals (Basel) 2023; 13:3175. [PMID: 37893899 PMCID: PMC10603630 DOI: 10.3390/ani13203175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Revised: 10/07/2023] [Accepted: 10/08/2023] [Indexed: 10/29/2023] Open
Abstract
The New World Vultures (Cathartidae) include seven species of obligate scavengers that, despite their ecological relevance, present critical information gaps around their evolutionary history and conservation. Insights into their phylogenetic relationships in recent years has enabled the addressing of such information gaps through approaches based on phylogeny. We reconstructed the ancestral area in America of the current species using two regionalization schemes and methods: Biogeography with Bayesian Evolutionary Analysis (BioGeoBears) and Bayesian Binary Model-Monte Carlo Markov Chains (BBM-MCMC). Then, we identified the priority species and areas for conservation by means of the Evolutionary Distinctiveness index (ED), as a proxy of the uniqueness of species according to phylogeny, and the Global Endangerment index (GE), mapping phylogenetic diversity. We found that the ancestral area of New World Vultures in America corresponds to South America, with dispersal processes that led to a recolonization of North America by Coragyps atratus, Gymnogyps californianus and Cathartes aura. We identified the Black Vulture, G. californianus and Vultur gryphus as priority species based on ED and "Evolutionary Distinct Globally Endangered" (EDGE) indexes, and the lowlands of Amazon River basin and the Orinoco basin and some tributaries areas of the Guiana Shield were identified as the priority areas when mapping the phylogenetic diversity. This study highlights the importance of filling knowledge gaps of species of conservation concern through the integration of evolutionary and ecological information and tools and, thus, developing adequate strategies to enhance the preservation of these species in the face of the current loss of biodiversity.
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Affiliation(s)
- Daniela Cortés-Díaz
- Semillero de Investigación en Ecología y Conservación, Universidad de La Salle, Bogotá 110151, Colombia;
| | | | - Juan Sebastián Restrepo-Cardona
- Wildlife Ecology and Conservation, University of Florida, Gainesville, FL 32611, USA;
- Fundación Cóndor Andino—Ecuador, Quito 170143, Ecuador
| | - Irene Estellés-Domingo
- Movement Ecology Laboratory, Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, C/Catedrático José Beltrán 2, 46980 Paterna, Valencia, Spain;
| | - Pascual López-López
- Movement Ecology Laboratory, Cavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia, C/Catedrático José Beltrán 2, 46980 Paterna, Valencia, Spain;
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11
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Teng SN, Svenning JC, Xu C. Large mammals and trees in eastern monsoonal China: anthropogenic losses since the Late Pleistocene and restoration prospects in the Anthropocene. Biol Rev Camb Philos Soc 2023; 98:1607-1632. [PMID: 37102332 DOI: 10.1111/brv.12968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Revised: 04/16/2023] [Accepted: 04/18/2023] [Indexed: 04/28/2023]
Abstract
Massive human-induced declines of large-sized animals and trees (megabiota) from the Late Pleistocene to the Anthropocene have resulted in downsized ecosystems across the globe, in which components and functions have been greatly simplified. In response, active restoration projects of extant large-sized species or functional substitutes are needed at large scales to promote ecological processes that are important for ecosystem self-regulation and biodiversity maintenance. Despite the desired global scope of such projects, they have received little attention in East Asia. Here, we synthesise the biogeographical and ecological knowledge of megabiota in ancient and modern China, with relevant data mostly located in eastern monsoonal China (EMC), aiming to assess its potential for restoring functionally intact ecosystems modulated by megabiota. We found that during the Late Pleistocene, 12 mammalian megafaunal (carnivores ≥15 kg and herbivores ≥500 kg) species disappeared from EMC: one carnivore Crocuta ultima (East Asian spotted hyena) and 11 herbivores including six megaherbivores (≥1000 kg). The relative importance of climate change and humans in driving these losses remains debated, despite accumulating evidence in favour of the latter. Later massive depletion of megafauna and large-sized (45-500 kg) herbivores has been closely associated with agricultural expansion and societal development, especially during the late Holocene. While forests rich in large timber trees (33 taxa in written records) were common in the region 2000-3000 years ago, millennial-long logging has resulted in considerable range contractions and at least 39 threatened species. The wide distribution of C. ultima, which likely favoured open or semi-open habitats (like extant spotted hyenas), suggests the existence of mosaic open and closed vegetation in the Late Pleistocene across EMC, in line with a few pollen-based vegetation reconstructions and potentially, or at least partially, reflecting herbivory by herbivorous megafauna. The widespread loss of megaherbivores may have strongly compromised seed dispersal for both megafruit (fleshy fruits with widths ≥40 mm) and non-megafruit plant species in EMC, especially in terms of extra-long-distance (>10 km) dispersal, which is critical for plant species that rely on effective biotic agents to track rapid climate change. The former occurrence of large mammals and trees have translated into rich material and non-material heritages passed down across generations. Several reintroduction projects have been implemented or are under consideration, with the case of Elaphurus davidianus a notable success in recovering wild populations in the middle reaches of the Yangtze River, although trophic interactions with native carnivorous megafauna have not yet been restored. Lessons of dealing with human-wildlife conflicts are key to public support for maintaining landscapes shared with megafauna and large herbivores in the human-dominated Anthropocene. Meanwhile, potential human-wildlife conflicts, e.g. public health risks, need to be scientifically informed and effectively reduced. The Chinese government's strong commitment to improved policies of ecological protection and restoration (e.g. ecological redlines and national parks) provides a solid foundation for a scaling-up contribution to the global scope needed for solving the crisis of biotic downsizing and ecosystem degradation.
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Affiliation(s)
- Shuqing N Teng
- School of Life Sciences, Nanjing University, Nanjing, 210023, China
| | - Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) & Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, 8000, Denmark
| | - Chi Xu
- School of Life Sciences, Nanjing University, Nanjing, 210023, China
- Key Laboratory of Restoration and Reconstruction of Degraded Ecosystems in northwestern China of Ministry of Education, Ningxia University, Yinchuan, 750021, China
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12
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Pringle RM, Abraham JO, Anderson TM, Coverdale TC, Davies AB, Dutton CL, Gaylard A, Goheen JR, Holdo RM, Hutchinson MC, Kimuyu DM, Long RA, Subalusky AL, Veldhuis MP. Impacts of large herbivores on terrestrial ecosystems. Curr Biol 2023; 33:R584-R610. [PMID: 37279691 DOI: 10.1016/j.cub.2023.04.024] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Large herbivores play unique ecological roles and are disproportionately imperiled by human activity. As many wild populations dwindle towards extinction, and as interest grows in restoring lost biodiversity, research on large herbivores and their ecological impacts has intensified. Yet, results are often conflicting or contingent on local conditions, and new findings have challenged conventional wisdom, making it hard to discern general principles. Here, we review what is known about the ecosystem impacts of large herbivores globally, identify key uncertainties, and suggest priorities to guide research. Many findings are generalizable across ecosystems: large herbivores consistently exert top-down control of plant demography, species composition, and biomass, thereby suppressing fires and the abundance of smaller animals. Other general patterns do not have clearly defined impacts: large herbivores respond to predation risk but the strength of trophic cascades is variable; large herbivores move vast quantities of seeds and nutrients but with poorly understood effects on vegetation and biogeochemistry. Questions of the greatest relevance for conservation and management are among the least certain, including effects on carbon storage and other ecosystem functions and the ability to predict outcomes of extinctions and reintroductions. A unifying theme is the role of body size in regulating ecological impact. Small herbivores cannot fully substitute for large ones, and large-herbivore species are not functionally redundant - losing any, especially the largest, will alter net impact, helping to explain why livestock are poor surrogates for wild species. We advocate leveraging a broad spectrum of techniques to mechanistically explain how large-herbivore traits and environmental context interactively govern the ecological impacts of these animals.
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Affiliation(s)
- Robert M Pringle
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA.
| | - Joel O Abraham
- Department of Ecology & Evolutionary Biology, Princeton University, Princeton, NJ 08544, USA
| | - T Michael Anderson
- Department of Biology, Wake Forest University, Winston Salem, NC 27109, USA
| | - Tyler C Coverdale
- Department of Biological Sciences, University of Notre Dame, Notre Dame, IN 46556, USA; Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | - Andrew B Davies
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
| | | | | | - Jacob R Goheen
- Department of Zoology & Physiology, University of Wyoming, Laramie, WY 82072, USA
| | - Ricardo M Holdo
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA
| | - Matthew C Hutchinson
- Department of Life & Environmental Sciences, University of California Merced, Merced, CA 95343, USA
| | - Duncan M Kimuyu
- Department of Natural Resources, Karatina University, Karatina, Kenya
| | - Ryan A Long
- Department of Fish and Wildlife Sciences, University of Idaho, Moscow, ID 83844, USA
| | - Amanda L Subalusky
- Department of Biology, University of Florida, Gainesville, FL 32611, USA
| | - Michiel P Veldhuis
- Institute of Environmental Sciences, Leiden University, 2333 CC Leiden, The Netherlands
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13
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Is endozoochoric seed dispersal by large herbivores an evolutionary adaptation? Revisiting the Janzen's ‘Foliage is the fruit’ hypothesis. ACTA OECOLOGICA 2023. [DOI: 10.1016/j.actao.2022.103888] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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14
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Hanberry BB, Faison EK. Re-framing deer herbivory as a natural disturbance regime with ecological and socioeconomic outcomes in the eastern United States. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 868:161669. [PMID: 36681343 DOI: 10.1016/j.scitotenv.2023.161669] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Revised: 01/10/2023] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
Natural disturbances are critical ecosystem processes, with both ecological and socioeconomic benefits and disadvantages. Large herbivores are natural disturbances that have removed plant biomass for millions of years, although herbivore influence likely has declined during the past thousands of years corresponding with extinctions and declines in distributions and abundances of most animal species. Nonetheless, the conventional view, particularly in eastern North America, is that herbivory by large wild herbivores is at unprecedented levels, resulting in unnatural damage to forests. Here, we propose consideration of large herbivores as a natural disturbance that also imparts many crucial ecological advantages, using white-tailed deer (Odocoileus virginianus), the only wild large herbivore remaining throughout the eastern U.S., as our focal species. We examined evidence of detrimental effects of browsing on trees and forbs. We then considered that deer contribute to both fuel reduction and ecological restoration of herbaceous plants and historical open forests of savannas and woodlands by controlling tree and shrub densities, mimicking the consumer role of fire. Similarly to other disturbances, deer disturbance 'regimes' are uneven in severity across different ecosystems and landscapes, resulting in heterogeneity and diversity. In addition to biodiversity support and fuel reduction, socioeconomic benefits include >$20 billion dollars per year by 10 million hunters that support jobs and wildlife agencies, non-consumptive enjoyment of nature by 80 million people, cultural importance, and deer as ecological ambassadors, whereas costs include about $5 billion and up to 450 human deaths per year for motor vehicle accidents, along with crop damage and disease transmission. From a perspective of historical ecology rather than current baselines, deer impart a fundamental disturbance process with many ecological benefits and a range of socioeconomic effects.
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Affiliation(s)
- Brice B Hanberry
- USDA Forest Service, Rocky Mountain Research Station, Rapid City, SD 57702, United States of America.
| | - Edward K Faison
- Highstead, PO Box 1097, Redding, CT 06875, United States of America
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15
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Gordon CE, Greve M, Henley M, Bedetti A, Allin P, Svenning JC. Elephant rewilding affects landscape openness and fauna habitat across a 92-year period. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2023; 33:e2810. [PMID: 36694991 DOI: 10.1002/eap.2810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 11/27/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
Abstract
Trophic rewilding aims to promote biodiverse self-sustaining ecosystems through the restoration of ecologically important taxa and the trophic interactions and cascades they propagate. How rewilding effects manifest across broad temporal scales will determine ecosystem states; however, our understanding of post-rewilding dynamics across longer time periods is limited. Here we show that the restoration of a megaherbivore, the African savannah elephant (Loxodonta africana), promotes landscape openness (i.e., various measures of vegetation composition/complexity) and modifies fauna habitat and that these effects continue to manifest up to 92 years after reintroduction. We conducted a space-for-time floristic survey and assessment of 17 habitat attributes (e.g., floristic diversity and cover, ground wood, tree hollows) across five comparable nature reserves in South African savannah, where elephants were reintroduced between 1927 and 2003, finding that elephant reintroduction time was positively correlated with landscape openness and some habitat attributes (e.g., large-sized tree hollows) but negatively associated with others (e.g., large-sized coarse woody debris). We then indexed elephant site occurrence between 2006 and 2018 using telemetry data and found positive associations between site occurrence and woody plant densities. Taken alongside the longer-term space-for-time survey, this suggests that elephants are attracted to dense vegetation in the short term and that this behavior increases landscape openness in the long term. Our results suggest that trophic rewilding with elephants helps promote a semi-open ecosystem structure of high importance for African biodiversity. More generally, our results suggest that megafauna restoration represents a promising tool to curb Earth's recent ecological losses and highlights the importance of considering long-term ecological responses when designing and managing rewilding projects.
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Affiliation(s)
- Christopher E Gordon
- Centre for Biodiversity Dynamics in a Changing World and Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Michelle Greve
- Department of Plant and Soil Sciences, University of Pretoria, Pretoria, South Africa
| | - Michelle Henley
- Applied Behavioural Ecology and Ecosystem Research Unit, School of Environmental Sciences, University of South Africa, Pretoria, South Africa
- Elephants Alive, Hoedspruit, South Africa
- Department of Philosophy, Faculty of Humanities, University of Johannesburg, Johannesburg, South Africa
| | | | - Paul Allin
- Transfrontier Africa, Hoedspruit, South Africa
| | - Jens-Christian Svenning
- Centre for Biodiversity Dynamics in a Changing World and Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
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16
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Lopes F, Rossini M, Losacco F, Montanaro G, Gunter N, Tarasov S. Metagenomics reveals that dung beetles (Coleoptera: Scarabaeinae) broadly feed on reptile dung. Did they also feed on that of dinosaurs? Front Ecol Evol 2023. [DOI: 10.3389/fevo.2023.1132729] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023] Open
Abstract
The origin of the dung-feeding habits in dung beetles (Coleoptera: Scarabaeinae) is debatable. According to traditional views, the evolution of dung beetles (Coleoptera: Scarabaeinae) and their feeding habits are largely attributed to mammal dung. In this paper, we challenge this view and provide evidence that many dung beetle communities are actually attracted to the dung of reptiles and birds (= Sauropsida). In turn, this indicates that sauropsid dung may have played a crucial evolutionary role that was previously underestimated. We argue that it is physiologically realistic to consider that coprophagy in dung beetles could have evolved during the Cretaceous in response to the dung produced by dinosaurs. Furthermore, we demonstrate that sauropsid dung may be one of the major factors driving the emergence of insular dung beetle communities across the globe. We support our findings with amplicon-metagenomic analyses, field observations, and meta-analysis of the published literature.
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17
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Thomassen EE, Sigsgaard EE, Jensen MR, Olsen K, Hansen MDD, Svenning JC, Thomsen PF. Contrasting seasonal patterns in diet and dung-associated invertebrates of feral cattle and horses in a rewilding area. Mol Ecol 2023; 32:2071-2091. [PMID: 36744391 DOI: 10.1111/mec.16847] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Revised: 12/16/2022] [Accepted: 01/09/2023] [Indexed: 02/07/2023]
Abstract
Trophic rewilding is increasingly applied in restoration efforts, with the aim of reintroducing the ecological functions provided by large-bodied mammals and thereby promote self-regulating, biodiverse ecosystems. However, empirical evidence for the effects of megafauna introductions on the abundance and richness of other organisms such as plants and invertebrates, and the mechanisms involved still need strengthening. In this study, we use environmental DNA (eDNA) metabarcoding of dung from co-existing feral cattle and horses to assess the seasonal variation in plant diet and dung-associated arthropods and nematodes. We found consistently high diet richness of horses, with low seasonal variability, while the generally lower dietary diversity of cattle increased substantially during summer. Intriguingly, season-specific diets differed, with a greater proportion of trees in the horses' diet during winter, where cattle relied more on shrubs. Graminoids were predominantly found in the diet of horses, but were generally underrepresented compared to previous studies, possibly due to the high prevalence of forbs in the study area. Dung-associated arthropod richness was higher for cattle, largely due to a high richness of flies during summer. Several species of dung-associated arthropods were found primarily in dung from one of the two herbivores, and our data confirmed known patterns of seasonal activity. Nematode richness was constantly higher for horses, and nematode communities were markedly different between the two species. Our results demonstrate complementary effects of cattle and horses through diet differences and dung-associated invertebrate communities, enhancing our understanding of large herbivore effects on vegetation and associated biodiversity. These results are directly applicable for decision-making in rewilding projects, suggesting biodiversity-benefits by inclusion of functionally different herbivores.
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Affiliation(s)
| | | | | | - Kent Olsen
- Department of Research and Collections, Natural History Museum Aarhus, Aarhus C, Denmark
| | - Morten D D Hansen
- Department of Research and Collections, Natural History Museum Aarhus, Aarhus C, Denmark
| | - Jens-Christian Svenning
- Department of Biology, Aarhus University, Aarhus C, Denmark.,Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) & Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Aarhus University, Aarhus C, Denmark
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18
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Durand‐Bessart C, Cordeiro NJ, Chapman CA, Abernethy K, Forget P, Fontaine C, Bretagnolle F. Trait matching and sampling effort shape the structure of the frugivory network in Afrotropical forests. THE NEW PHYTOLOGIST 2023; 237:1446-1462. [PMID: 36377098 PMCID: PMC10108259 DOI: 10.1111/nph.18619] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Accepted: 10/13/2022] [Indexed: 06/16/2023]
Abstract
Frugivory in tropical forests is a major ecological process as most tree species rely on frugivores to disperse their seeds. However, the underlying mechanisms driving frugivore-plant networks remain understudied. Here, we evaluate the data available on the Afrotropical frugivory network to identify structural properties, as well as assess knowledge gaps. We assembled a database of frugivory interactions from the literature with > 10 000 links, between 807 tree and 285 frugivore species. We analysed the network structure using a block model that groups species with similar interaction patterns and estimates interaction probabilities among them. We investigated the species traits related to this grouping structure. This frugivory network was simplified into 14 tree and 14 frugivore blocks. The block structure depended on the sampling effort among species: Large mammals were better-studied, while smaller frugivores were the least studied. Species traits related to frugivory were strong predictors of the species composition of blocks and interactions among them. Fruits from larger trees were consumed by most frugivores, and large frugivores had higher probabilities to consume larger fruits. To conclude, this large-scale frugivory network was mainly structured by species traits involved in frugivory, and as expected by the distribution areas of species, while still being limited by sampling incompleteness.
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Affiliation(s)
- Clémentine Durand‐Bessart
- Biogeosciences, UMR 6282Université Bourgogne Franche Comte‐CNRS21000DijonFrance
- Centre d'Ecologie et des Sciences de la ConservationCESCO, UMR 7204, MNHN‐CNRS‐SU75005ParisFrance
| | - Norbert J. Cordeiro
- Department of Biology (mc WB 816)Roosevelt University430 S. Michigan AvenueChicagoIL60605USA
- Science & EducationThe Field Museum1400 S. Lake Shore DriveChicagoIL60605USA
| | - Colin A. Chapman
- Wilson Center1300 Pennsylvania Avenue NWWashingtonDC20004USA
- Department of AnthropologyCenter for the Advanced Study of Human Paleobiology, The George Washington UniversityWashingtonDC20037USA
- School of Life SciencesUniversity of KwaZulu‐NatalScottsville3201PietermaritzburgSouth Africa
- Shaanxi Key Laboratory for Animal ConservationNorthwest University710069Xi'anChina
| | - Katharine Abernethy
- African Forest Ecology Group, School of Natural SciencesUniversity of StirlingStirlingFK9 4LAUK
- Institut de Recherches en Ecologie TropicaleCENARESTGros Bouquet2144LibrevilleGabon
| | - Pierre‐Michel Forget
- Muséum National d'Histoire NaturelleUMR 7179 MECADEV CNRS‐MNHN1 Avenue du Petit Château91800BrunoyFrance
| | - Colin Fontaine
- Centre d'Ecologie et des Sciences de la ConservationCESCO, UMR 7204, MNHN‐CNRS‐SU75005ParisFrance
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19
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Spengler RN, Kienast F, Roberts P, Boivin N, Begun DR, Ashastina K, Petraglia M. Bearing Fruit: Miocene Apes and Rosaceous Fruit Evolution. BIOLOGICAL THEORY 2023; 18:134-151. [PMID: 37214192 PMCID: PMC10191964 DOI: 10.1007/s13752-022-00413-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 09/08/2022] [Indexed: 05/24/2023]
Abstract
Extinct megafaunal mammals in the Americas are often linked to seed-dispersal mutualisms with large-fruiting tree species, but large-fruiting species in Europe and Asia have received far less attention. Several species of arboreal Maloideae (apples and pears) and Prunoideae (plums and peaches) evolved large fruits starting around nine million years ago, primarily in Eurasia. As evolutionary adaptations for seed dispersal by animals, the size, high sugar content, and bright colorful visual displays of ripeness suggest that mutualism with megafaunal mammals facilitated the evolutionary change. There has been little discussion as to which animals were likely candidate(s) on the late Miocene landscape of Eurasia. We argue that several possible dispersers could have consumed the large fruits, with endozoochoric dispersal usually relying on guilds of species. During the Pleistocene and Holocene, the dispersal guild likely included ursids, equids, and elephantids. During the late Miocene, large primates were likely also among the members of this guild, and the potential of a long-held mutualism between the ape and apple clades merits further discussion. If primates were a driving factor in the evolution of this large-fruit seed-dispersal system, it would represent an example of seed-dispersal-based mutualism with hominids millions of years prior to crop domestication or the development of cultural practices, such as farming.
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Affiliation(s)
- Robert N. Spengler
- Department of Archaeology, Max Planck Institute for Geoanthropology, Jena, Germany
- Domestication and Anthropogenic Evolution Research Group, Max Planck Institute for Geoanthropology, Jena, Germany
| | - Frank Kienast
- Senckenberg Research Station of Quaternary, Palaeontology, Weimar, Germany
| | - Patrick Roberts
- Department of Archaeology, Max Planck Institute for Geoanthropology, Jena, Germany
- isoTROPIC Research Group, Max Planck Institute for Geoanthropology, Jena, Germany
| | - Nicole Boivin
- Department of Archaeology, Max Planck Institute for Geoanthropology, Jena, Germany
- Department of Anthropology, National Museum of Natural History, Smithsonian Institution, Washington, DC USA
- School of Social Science, The University of Queensland, Brisbane, Australia
- Department of Anthropology and Archaeology, University of Calgary, Calgary, Canada
| | - David R. Begun
- Department of Anthropology, University of Toronto, Toronto, Canada
| | - Kseniia Ashastina
- Department of Archaeology, Max Planck Institute for Geoanthropology, Jena, Germany
- Domestication and Anthropogenic Evolution Research Group, Max Planck Institute for Geoanthropology, Jena, Germany
| | - Michael Petraglia
- Department of Anthropology, National Museum of Natural History, Smithsonian Institution, Washington, DC USA
- Australian Research Centre for Human Evolution, Griffith University, Nathan, Queensland Australia
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20
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Human Disturbance Affects Dung Beetle Assemblages in French Guiana Forests. DIVERSITY 2022. [DOI: 10.3390/d14121059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Abstract
French Guiana forests are threatened by increasing human activity such as infrastructure development, facilitating access to the forest and, therefore, logging, mining, farming and hunting. To highlight the impact of human pressure on the forest fauna, dung beetle assemblage was analyzed near Saint-Georges-de-l’Oyapock and compared with other sites in French Guiana, considering the distance to the main city and forest cover loss as proxies of human activities. Hill numbers and beta diversity were calculated. Non-metric multidimensional scaling and redundancy analyses were carried out to disentangle the effect of the distance to the nearest city and forest cover loss as proxies of human pressure, but also temperature and rainfall as proxies of climatic variations on dung beetle assemblage. Species richness increased significantly with the distance to the nearest city and decreasing forest cover loss. Assemblage structure varied among sites mainly with distance to the nearest city but also with rainfall. It varied also with forest cover loss, but not significantly. This study showed that human disturbances and climatic conditions, even if represented by proxies, affected dung beetle assemblage structures in French Guiana forests.
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21
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Kjær KH, Winther Pedersen M, De Sanctis B, De Cahsan B, Korneliussen TS, Michelsen CS, Sand KK, Jelavić S, Ruter AH, Schmidt AMA, Kjeldsen KK, Tesakov AS, Snowball I, Gosse JC, Alsos IG, Wang Y, Dockter C, Rasmussen M, Jørgensen ME, Skadhauge B, Prohaska A, Kristensen JÅ, Bjerager M, Allentoft ME, Coissac E, Rouillard A, Simakova A, Fernandez-Guerra A, Bowler C, Macias-Fauria M, Vinner L, Welch JJ, Hidy AJ, Sikora M, Collins MJ, Durbin R, Larsen NK, Willerslev E. A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA. Nature 2022; 612:283-291. [PMID: 36477129 PMCID: PMC9729109 DOI: 10.1038/s41586-022-05453-y] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 10/18/2022] [Indexed: 12/12/2022]
Abstract
Late Pliocene and Early Pleistocene epochs 3.6 to 0.8 million years ago1 had climates resembling those forecasted under future warming2. Palaeoclimatic records show strong polar amplification with mean annual temperatures of 11-19 °C above contemporary values3,4. The biological communities inhabiting the Arctic during this time remain poorly known because fossils are rare5. Here we report an ancient environmental DNA6 (eDNA) record describing the rich plant and animal assemblages of the Kap København Formation in North Greenland, dated to around two million years ago. The record shows an open boreal forest ecosystem with mixed vegetation of poplar, birch and thuja trees, as well as a variety of Arctic and boreal shrubs and herbs, many of which had not previously been detected at the site from macrofossil and pollen records. The DNA record confirms the presence of hare and mitochondrial DNA from animals including mastodons, reindeer, rodents and geese, all ancestral to their present-day and late Pleistocene relatives. The presence of marine species including horseshoe crab and green algae support a warmer climate than today. The reconstructed ecosystem has no modern analogue. The survival of such ancient eDNA probably relates to its binding to mineral surfaces. Our findings open new areas of genetic research, demonstrating that it is possible to track the ecology and evolution of biological communities from two million years ago using ancient eDNA.
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Affiliation(s)
- Kurt H Kjær
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark.
| | - Mikkel Winther Pedersen
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Bianca De Sanctis
- Department of Zoology, University of Cambridge, Cambridge, UK
- Department of Genetics, University of Cambridge, Cambridge, UK
| | - Binia De Cahsan
- Section for Molecular Ecology and Evolution, The Globe Institute, Faculty of Health and Medical Sciences, Copenhagen, Denmark
| | - Thorfinn S Korneliussen
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Christian S Michelsen
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
- Niels Bohr Institute, University of Copenhagen, Copenhagen, Denmark
| | - Karina K Sand
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Stanislav Jelavić
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
- Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, IRD, Université Gustave Eiffel, ISTerre, Grenoble, France
| | - Anthony H Ruter
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Astrid M A Schmidt
- Nordic Foundation for Development and Ecology (NORDECO), Copenhagen, Denmark
- DIS Study Abroad in Scandinavia, University of Copenhagen, Copenhagen, Denmark
| | - Kristian K Kjeldsen
- Department of Glaciology and Climate, Geological Survey of Denmark and Greenland, Copenhagen, Denmark
| | - Alexey S Tesakov
- Geological Institute, Russian Academy of Sciences, Moscow, Russia
| | - Ian Snowball
- Department of Earth Sciences, Uppsala University, Uppsala, Sweden
| | - John C Gosse
- Department of Earth and Environmental Sciences, Dalhousie University, Halifax, Nova Scotia, Canada
| | - Inger G Alsos
- The Arctic University Museum of Norway, UiT-The Arctic University of Norway, Tromsø, Norway
| | - Yucheng Wang
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
- Department of Zoology, University of Cambridge, Cambridge, UK
| | | | | | | | | | - Ana Prohaska
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - Jeppe Å Kristensen
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
- Geological Survey of Denmark and Greenland, (GEUS), Copenhagen, Denmark
| | - Morten Bjerager
- Department of Geophysics and Sedimentary Basins, Geological Survey of Denmark and Greenland, Copenhagen, Denmark
| | - Morten E Allentoft
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
- Trace and Environmental DNA (TrEnD) Laboratory, School of Molecular and Life Sciences, Curtin University, Perth, Western Australia, Australia
| | - Eric Coissac
- The Arctic University Museum of Norway, UiT-The Arctic University of Norway, Tromsø, Norway
- University of Grenoble-Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France
| | - Alexandra Rouillard
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
- Department of Geosciences, UiT-The Arctic University of Norway, Tromsø, Norway
| | | | - Antonio Fernandez-Guerra
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Chris Bowler
- Institut de Biologie de l'Ecole Normale Supérieure (IBENS), Ecole Normale Supérieure, CNRS, INSERM Université PSL, Paris, France
| | - Marc Macias-Fauria
- School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Lasse Vinner
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - John J Welch
- Department of Genetics, University of Cambridge, Cambridge, UK
| | - Alan J Hidy
- Center for Accelerator Mass Spectrometry, Lawrence Livermore National Laboratory, Livermore, CA, USA
| | - Martin Sikora
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Matthew J Collins
- Department of Archaeology, University of Cambridge, Cambridge, UK
- Section for GeoBiology, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Richard Durbin
- Department of Genetics, University of Cambridge, Cambridge, UK
| | - Nicolaj K Larsen
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark
| | - Eske Willerslev
- Lundbeck Foundation GeoGenetics Centre, Globe Institute, University of Copenhagen, Copenhagen, Denmark.
- Department of Zoology, University of Cambridge, Cambridge, UK.
- MARUM, University of Bremen, Bremen, Germany.
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22
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Lundgren EJ, Ramp D, Middleton OS, Wooster EIF, Kusch E, Balisi M, Ripple WJ, Hasselerharm CD, Sanchez JN, Mills M, Wallach AD. A novel trophic cascade between cougars and feral donkeys shapes desert wetlands. J Anim Ecol 2022; 91:2348-2357. [PMID: 35871769 PMCID: PMC10087508 DOI: 10.1111/1365-2656.13766] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2021] [Accepted: 06/08/2022] [Indexed: 12/14/2022]
Abstract
Introduced large herbivores have partly filled ecological gaps formed in the late Pleistocene, when many of the Earth's megafauna were driven extinct. However, extant predators are generally considered incapable of exerting top-down influences on introduced megafauna, leading to unusually strong disturbance and herbivory relative to native herbivores. We report on the first documented predation of juvenile feral donkeys Equus africanus asinus by cougars Puma concolor in the Mojave and Sonoran Deserts of North America. We then investigated how cougar predation corresponds with differences in feral donkey behaviour and associated effects on desert wetlands. Focusing on a feral donkey population in the Death Valley National Park, we used camera traps and vegetation surveys to compare donkey activity patterns and impacts between wetlands with and without cougar predation. Donkeys were primarily diurnal at wetlands with cougar predation, thereby avoiding cougars. However, donkeys were active throughout the day and night at sites without predation. Donkeys were ~87% less active (measured as hours of activity a day) at wetlands with predation (p < 0.0001). Sites with predation had reduced donkey disturbance and herbivory, including ~46% fewer access trails, 43% less trampled bare ground and 192% more canopy cover (PERMANOVA, R2 = 0.22, p = 0.0003). Our study is the first to reveal a trophic cascade involving cougars, feral equids and vegetation. Cougar predation appears to rewire an ancient food web, with diverse implications for modern ecosystems. Our results suggest that protecting apex predators could have important implications for the ecological effects of introduced megafauna.
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Affiliation(s)
- Erick J Lundgren
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark.,Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark.,Centre for Compassionate Conservation, TD School, University of Technology Sydney, Ultimo, Australia
| | - Daniel Ramp
- Centre for Compassionate Conservation, TD School, University of Technology Sydney, Ultimo, Australia
| | | | - Eamonn I F Wooster
- Centre for Compassionate Conservation, TD School, University of Technology Sydney, Ultimo, Australia
| | - Erik Kusch
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark.,Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, Aarhus C, Denmark
| | - Mairin Balisi
- La Brea Tar Pits and Museum, Los Angeles, California, USA.,Raymond M. Alf Museum of Paleontology, Claremont, CA, USA
| | - William J Ripple
- Department of Forest Ecosystems and Society, Oregon State University, Corvallis, OR, USA
| | - Chris D Hasselerharm
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark
| | - Jessica N Sanchez
- One Health Institute, School of Veterinary Medicine, University of California at Davis, Davis, CA, USA
| | - Mystyn Mills
- Department of Botany & Plant Sciences, University of California Riverside, Riverside, CA, USA
| | - Arian D Wallach
- Centre for Compassionate Conservation, TD School, University of Technology Sydney, Ultimo, Australia
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23
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Joos J, Pimiento C, Miles DB, Müller J. Quaternary megafauna extinctions altered body size distribution in tortoises. Proc Biol Sci 2022; 289:20221947. [PMID: 36382514 PMCID: PMC9667361 DOI: 10.1098/rspb.2022.1947] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 10/25/2022] [Indexed: 12/02/2023] Open
Abstract
The late Quaternary is characterized by the extinction of many terrestrial megafauna, which included tortoises (Family: Testudinidae). However, limited information is available on how extinction shaped the phenotype of surviving taxa. Here, based on a global dataset of straight carapace length, we investigate the temporal variation, spatial distribution and evolution of tortoise body size over the past 23 million years, thereby capturing the effects of Quaternary extinctions in this clade. We found a significant change in body size distribution characterized by a reduction of both mean body size and maximum body size of extant tortoises relative to fossil taxa. This reduction of body size occurred earlier in mainland (Early Pleistocene 2.588-0.781 Ma) than in island tortoises (Late Pleistocene/Holocene 0.126-0 Ma). Despite contrasting body size patterns between fossil and extant taxa on a spatial scale, tortoise body size showed limited variation over time until this decline. Body size is a fundamental functional trait determining many aspects of species ecologies, with large tortoises playing key roles as ecosystem engineers. As such, the transition from larger sized to smaller sized classes indicated by our findings likely resulted in the homogenization of tortoises' ecological functions and diminished the role of tortoises in structuring the vegetation community.
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Affiliation(s)
- Julia Joos
- Department of Biological Sciences, Ohio University, Athens, OH 45701, USA
- Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstraße 43 Berlin D-10115, Germany
| | - Catalina Pimiento
- Paleontological Institute and Museum, University of Zurich, Zurich CH-8006, Switzerland
- Department of Biosciences, Swansea University, Wallace Building, Singleton Park, Swansea SA2 8PP, UK
- Smithsonian Tropical Research Institute, PO Box 2072, Balboa, Panama
| | - Donald B. Miles
- Department of Biological Sciences, Ohio University, Athens, OH 45701, USA
| | - Johannes Müller
- Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Invalidenstraße 43 Berlin D-10115, Germany
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24
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Late Pleistocene megafauna extinction leads to missing pieces of ecological space in a North American mammal community. Proc Natl Acad Sci U S A 2022; 119:e2115015119. [PMID: 36122233 PMCID: PMC9522422 DOI: 10.1073/pnas.2115015119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The conservation status of large-bodied mammals is dire. Their decline has serious consequences because they have unique ecological roles not replicated by smaller-bodied animals. Here, we use the fossil record of the megafauna extinction at the terminal Pleistocene to explore the consequences of past biodiversity loss. We characterize the isotopic and body-size niche of a mammal community in Texas before and after the event to assess the influence on the ecology and ecological interactions of surviving species (>1 kg). Preextinction, a variety of C4 grazers, C3 browsers, and mixed feeders existed, similar to modern African savannas, with likely specialization among the two sabertooth species for juvenile grazers. Postextinction, body size and isotopic niche space were lost, and the δ13C and δ15N values of some survivors shifted. We see mesocarnivore release within the Felidae: the jaguar, now an apex carnivore, moved into the specialized isotopic niche previously occupied by extinct cats. Puma, previously absent, became common and lynx shifted toward consuming more C4-based resources. Lagomorphs were the only herbivores to shift toward C4 resources. Body size changes from the Pleistocene to Holocene were species-specific, with some animals (deer, hare) becoming significantly larger and others smaller (bison, rabbits) or exhibiting no change to climate shifts or biodiversity loss. Overall, the Holocene body-size-isotopic niche was drastically reduced and considerable ecological complexity lost. We conclude biodiversity loss led to reorganization of survivors and many "missing pieces" within our community; without intervention, the loss of Earth's remaining ecosystems that support megafauna will likely suffer the same fate.
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25
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Ericson PGP, Irestedt M, Zuccon D, Larsson P, Tison JL, Emslie SD, Götherström A, Hume JP, Werdelin L, Qu Y. A 14,000-year-old genome sheds light on the evolution and extinction of a Pleistocene vulture. Commun Biol 2022; 5:857. [PMID: 35999361 PMCID: PMC9399080 DOI: 10.1038/s42003-022-03811-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Accepted: 08/05/2022] [Indexed: 11/23/2022] Open
Abstract
The New World Vulture [Coragyps] occidentalis (L. Miller, 1909) is one of many species that were extinct by the end of the Pleistocene. To understand its evolutionary history we sequenced the genome of a 14,000 year old [Coragyps] occidentalis found associated with megaherbivores in the Peruvian Andes. occidentalis has been viewed as the ancestor, or possibly sister, to the extant Black Vulture Coragyps atratus, but genomic data shows occidentalis to be deeply nested within the South American clade of atratus. Coragyps atratus inhabits lowlands, but the fossil record indicates that occidentalis mostly occupied high elevations. Our results suggest that occidentalis evolved from a population of atratus in southwestern South America that colonized the High Andes 300 to 400 kya. The morphological and morphometric differences between occidentalis and atratus may thus be explained by ecological diversification following from the natural selection imposed by this new and extreme, high elevation environment. The sudden evolution of a population with significantly larger body size and different anatomical proportions than atratus thus constitutes an example of punctuated evolution. 14,000 year old DNA reveals the evolutionary dynamics and adaptations of South American vultures.
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Affiliation(s)
- Per G P Ericson
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, P.O. Box 50007, SE-10405, Stockholm, Sweden.
| | - Martin Irestedt
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, P.O. Box 50007, SE-10405, Stockholm, Sweden
| | - Dario Zuccon
- Institut de Systématique, Evolution, Biodiversité (ISYEB), UMR7205 CNRS MNHN UPMC EPHE Sorbonne Université, Muséum National d'Histoire Naturelle, 75005, Paris, France
| | - Petter Larsson
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, P.O. Box 50007, SE-10405, Stockholm, Sweden.,Centre for Palaeogenetics, Stockholm, Sweden
| | - Jean-Luc Tison
- Department of Laboratory Medicine, Örebro University Hospital; Södra Grev Rosengatan, SE-70185, Örebro, Sweden
| | - Steven D Emslie
- Department of Biology and Marine Biology, University of North Carolina; Wilmington, 601S. College Road, Wilmington, NC, 28403, USA
| | - Anders Götherström
- Centre for Palaeogenetics, Stockholm, Sweden.,Department of Archaeology and Classical Studies, Stockholm University, SE-10691, Stockholm, Sweden
| | - Julian P Hume
- Bird Group, Department of Life Sciences, Natural History Museum, Akeman St, Tring, Herts, UK
| | - Lars Werdelin
- Department of Palaeobiology, Swedish Museum of Natural History, P.O. Box 50007, SE-10405, Stockholm, Sweden
| | - Yanhua Qu
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, P.O. Box 50007, SE-10405, Stockholm, Sweden. .,Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China.
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26
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Griffith P, Lang JW, Turvey ST, Gumbs R. Using functional traits to identify conservation priorities for the world's crocodylians. Funct Ecol 2022. [DOI: 10.1111/1365-2435.14140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Phoebe Griffith
- Institute of Zoology Zoological Society of London London UK
- Wildlife Conservation Research Unit The Recanati‐Kaplan Centre, Department of Zoology, University of Oxford Oxford UK
| | - Jeffrey W. Lang
- Gharial Ecology Project Madras Crocodile Bank Trust Mamallapuram Tamil Nadu India
| | | | - Rikki Gumbs
- EDGE of Existence Programme Conservation and Policy, Zoological Society of London London UK
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27
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Late quaternary biotic homogenization of North American mammalian faunas. Nat Commun 2022; 13:3940. [PMID: 35803946 PMCID: PMC9270452 DOI: 10.1038/s41467-022-31595-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Accepted: 06/22/2022] [Indexed: 12/20/2022] Open
Abstract
Biotic homogenization—increasing similarity of species composition among ecological communities—has been linked to anthropogenic processes operating over the last century. Fossil evidence, however, suggests that humans have had impacts on ecosystems for millennia. We quantify biotic homogenization of North American mammalian assemblages during the late Pleistocene through Holocene (~30,000 ybp to recent), a timespan encompassing increased evidence of humans on the landscape (~20,000–14,000 ybp). From ~10,000 ybp to recent, assemblages became significantly more homogenous (>100% increase in Jaccard similarity), a pattern that cannot be explained by changes in fossil record sampling. Homogenization was most pronounced among mammals larger than 1 kg and occurred in two phases. The first followed the megafaunal extinction at ~10,000 ybp. The second, more rapid phase began during human population growth and early agricultural intensification (~2,000–1,000 ybp). We show that North American ecosystems were homogenizing for millennia, extending human impacts back ~10,000 years. Biotic homogenization, which is increased similarity in the composition of species among communities, is rising due to human activities. Using North American mammal fossil records from the past 30,000 years, this study shows that this phenomenon is ancient, beginning between 12,000 and 10,000 years ago with the extinction of the mammal megafauna.
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28
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Cooke R, Gearty W, Chapman ASA, Dunic J, Edgar GJ, Lefcheck JS, Rilov G, McClain CR, Stuart-Smith RD, Kathleen Lyons S, Bates AE. Anthropogenic disruptions to longstanding patterns of trophic-size structure in vertebrates. Nat Ecol Evol 2022; 6:684-692. [PMID: 35449460 DOI: 10.1038/s41559-022-01726-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Accepted: 03/07/2022] [Indexed: 11/09/2022]
Abstract
Diet and body mass are inextricably linked in vertebrates: while herbivores and carnivores have converged on much larger sizes, invertivores and omnivores are, on average, much smaller, leading to a roughly U-shaped relationship between body size and trophic guild. Although this U-shaped trophic-size structure is well documented in extant terrestrial mammals, whether this pattern manifests across diverse vertebrate clades and biomes is unknown. Moreover, emergence of the U-shape over geological time and future persistence are unknown. Here we compiled a comprehensive dataset of diet and body size spanning several vertebrate classes and show that the U-shaped pattern is taxonomically and biogeographically universal in modern vertebrate groups, except for marine mammals and seabirds. We further found that, for terrestrial mammals, this U-shape emerged by the Palaeocene and has thus persisted for at least 66 million years. Yet disruption of this fundamental trophic-size structure in mammals appears likely in the next century, based on projected extinctions. Actions to prevent declines in the largest animals will sustain the functioning of Earth's wild ecosystems and biomass energy distributions that have persisted through deep time.
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Affiliation(s)
- Rob Cooke
- UK Centre for Ecology & Hydrology, Wallingford, UK. .,Department of Biological and Environmental Sciences, University of Gothenburg, Gothenburg, Sweden. .,Gothenburg Global Biodiversity Centre, Gothenburg, Sweden.
| | - William Gearty
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, USA.
| | - Abbie S A Chapman
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment, University College London, London, UK
| | - Jillian Dunic
- Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia, Canada
| | - Graham J Edgar
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
| | - Jonathan S Lefcheck
- Tennenbaum Marine Observatories Network and MarineGEO Program, Smithsonian Environmental Research Center, Edgewater, MD, USA
| | - Gil Rilov
- National Institute of Oceanography, Israel Limnological and Oceanographic Research, Haifa, Israel
| | | | - Rick D Stuart-Smith
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
| | - S Kathleen Lyons
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, USA
| | - Amanda E Bates
- Biology Department, University of Victoria, Victoria, British Columbia, Canada
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29
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Sales RK, McMichael CNH, Flantua SGA, Hagemans K, Zondervan JR, González-Arango C, Church WB, Bush MB. Potential distributions of pre-Columbian people in Tropical Andean landscapes. Philos Trans R Soc Lond B Biol Sci 2022; 377:20200502. [PMID: 35249384 PMCID: PMC8899625 DOI: 10.1098/rstb.2020.0502] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
Much has yet to be learned of the spatial patterning of pre-Columbian people across the Tropical Andes. Using compiled archaeological data and a suite of environmental variables, we generate an ensemble species distribution model (SDM) that incorporates general additive models, random forest models and Maxent models to reconstruct spatial patterns of pre-Columbian people that inhabited the Tropical Andes east of the continental divide, within the modern countries of Bolivia, Peru and Ecuador. Within this region, here referred to as the eastern Andean flank, elevation, mean annual cloud frequency, distance to rivers and precipitation of the driest quarter are the environmental variables most closely related to human occupancy. Our model indicates that 11.04% of our study area (65 368 km2) was likely occupied by pre-Columbian people. Our model shows that 30 of 351 forest inventory plots, which are used to generate ecological understanding of Andean ecosystems, were likely occupied in the pre-Columbian period. In previously occupied sites, successional trajectories may still be shaping forest dynamics, and those forests may still be recovering from the ecological legacy of pre-Columbian impacts. Our ensemble SDM links palaeo- and neo-ecology and can also be used to guide both future archaeological and ecological studies. This article is part of the theme issue 'Tropical forests in the deep human past'.
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Affiliation(s)
- Rachel K Sales
- Institute for Global Ecology, Florida Institute of Technology, Melbourne, FL 32901, USA
| | - Crystal N H McMichael
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Suzette G A Flantua
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1098 XH Amsterdam, The Netherlands.,Department of Biological Sciences, University of Bergen, PO Box 7803, Bergen, Norway
| | - Kimberley Hagemans
- Department of Physical Geography, Faculty of Geosciences, Utrecht University, Princetonlaan 8a, 3584 CB, Utrecht, The Netherlands
| | - Jesse R Zondervan
- School of Geography, Earth, and Environmental Sciences, University of Plymouth, Plymouth PL4 8AA, UK.,Department of Earth Sciences, University of Oxford, Oxford OX1 3AN, UK
| | | | - Warren B Church
- Department of Earth and Space Sciences, Columbus State University, Columbus, GA 31907, USA
| | - Mark B Bush
- Institute for Global Ecology, Florida Institute of Technology, Melbourne, FL 32901, USA
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30
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Onstein RE, Kissling WD, Linder HP. The megaherbivore gap after the non-avian dinosaur extinctions modified trait evolution and diversification of tropical palms. Proc Biol Sci 2022; 289:20212633. [PMID: 35414237 PMCID: PMC9006001 DOI: 10.1098/rspb.2021.2633] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
The Cretaceous-Palaeogene (K-Pg) extinction of the non-avian dinosaurs (66 Ma) led to a 25 million year gap of megaherbivores (>1000 kg) before the evolution of megaherbivorous mammals in the Late Eocene (40 Ma). The botanical consequences of this 'Palaeocene megaherbivore gap' (PMHG) remain poorly explored. We hypothesize that the absence of megaherbivores should result in changes in the diversification and trait evolution of associated plant lineages. We used phylogenetic time- and trait-dependent diversification models with palms (Arecaceae) and show that the PMHG was characterized by speciation slowdowns, decreased evolution of armature and increased evolution of megafaunal (≥4 cm) fruits. This suggests that the absence of browsing by megaherbivores during the PMHG may have led to a loss of defence traits, but the absence of megaherbivorous seed dispersers did not lead to a loss of megafaunal fruits. Instead, increases in PMHG fruit sizes may be explained by simultaneously rising temperatures, rainforest expansion, and the subsequent radiation of seed-dispersing birds and mammals. We show that the profound impact of the PMHG on plant diversification can be detected even with the overwriting of adaptations by the subsequent Late Eocene opening up of megaherbivore-associated ecological opportunities. Our study provides a quantitative, comparative framework to assess diversification and adaptation during one of the most enigmatic periods in angiosperm history.
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Affiliation(s)
- Renske E. Onstein
- Evolution and Adaptation, German Centre for Integrative Biodiversity Research (iDiv) Halle–Jena–Leipzig, Leipzig 04103 Germany
| | - W. Daniel Kissling
- Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, Amsterdam, Noord-Holland, The Netherlands
| | - H. Peter Linder
- Department of Systematic and Evolutionary Botany, University of Zurich, Zurich, ZH Switzerland
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31
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Da Silva AM, Pires LP, De Melo C. Forest dependent birds are the main frugivorous species in mutualistic networks from the Brazilian Cerrado. ECOSCIENCE 2022. [DOI: 10.1080/11956860.2021.1987653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
| | - Luís Paulo Pires
- Instituto De Biologia, Universidade Federal De Uberlândia, Uberlândia, Brazil
| | - Celine De Melo
- Instituto De Biologia, Universidade Federal De Uberlândia, Uberlândia, Brazil
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32
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Abstract
Archaeological and paleontological records offer tremendous yet often untapped potential for examining long-term biodiversity trends and the impact of climate change and human activity on ecosystems. Yet, zooarchaeological and fossil remains suffer various limitations, including that they are often highly fragmented and morphologically unidentifiable, preventing them from being optimally leveraged for addressing fundamental research questions in archaeology, paleontology, and conservation paleobiology. Here, we explore the potential of palaeoproteomics—the study of ancient proteins—to serve as a critical tool for creating richer, more informative datasets about biodiversity change that can be leveraged to generate more realistic, constructive, and effective conservation and restoration strategies into the future.
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33
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Donoso I, Fricke EC, Hervías-Parejo S, Rogers HS, Traveset A. Drivers of Ecological and Evolutionary Disruptions in the Seed Dispersal Process: Research Trends and Biases. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.794481] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
As the sole opportunity for most plants to move, seed dispersal influences the biodiversity and functioning of plant communities. Global change drivers have the potential to disrupt seed dispersal processes, affecting plant communities and ecosystem functions. Even though much information is available on the effects of seed dispersal disruption (SDD), we still lack a comprehensive understanding of its main causes at a global scale, as well as the potential knowledge gaps derived from research biases. Here we present a systematic review of biotic and abiotic SDDs to ascertain the global change drivers addressed, dispersal modes impacted, plant processes affected, and spatial focus of existing research on this topic up-to-date. Although there are many modes of dispersal and global change drivers in temperate and tropical ecosystems worldwide, research efforts have predominantly addressed the effect of alien species for biotic seed dispersal in temperate systems and oceanic islands as well as how defaunation of bird or mammal dispersers has affected seed removal in the Neotropics. SDD studies were also biased toward forest ecosystems, with few in shrublands or grasslands. Finally, the effects of climate change, ecological consequences at the whole community level, and evolutionary changes were largely unrepresented in SDD studies. These trends are likely due to a combination of true geographic and ecological patterns in seed dispersal and global change and bias in research focus. We conclude that increased research investment in the less-studied systems and a better understanding of potential synergies and feedback between multiple global change drivers will be important to forecast the threats to plant biodiversity and those ecosystem functions derived from seed dispersal in the Anthropocene.
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34
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35
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Dantas VL, Pausas JG. The legacy of the extinct Neotropical megafauna on plants and biomes. Nat Commun 2022; 13:129. [PMID: 35013233 PMCID: PMC8748933 DOI: 10.1038/s41467-021-27749-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2020] [Accepted: 12/10/2021] [Indexed: 11/09/2022] Open
Abstract
Large mammal herbivores are important drivers of plant evolution and vegetation patterns, but the extent to which plant trait and ecosystem geography currently reflect the historical distribution of extinct megafauna is unknown. We address this question for South and Central America (Neotropical biogeographic realm) by compiling data on plant defence traits, climate, soil, and fire, as well as on the historical distribution of extinct megafauna and extant mammal herbivores. We show that historical mammal herbivory, especially by extinct megafauna, and soil fertility explain substantial variability in wood density, leaf size, spines and latex. We also identified three distinct regions (''antiherbiomes''), differing in plant defences, environmental conditions, and megafauna history. These patterns largely matched those observed in African ecosystems, where abundant megafauna still roams, and suggest that some ecoregions experienced savanna-to-forest shifts following megafauna extinctions. Here, we show that extinct megafauna left a significant imprint on current ecosystem biogeography.
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Affiliation(s)
- Vinicius L Dantas
- Institute of Geography, Federal University of Uberlandia (UFU), Av. João Naves de Avila, 2121, Uberlandia, 38400-902, MG, Brazil.
| | - Juli G Pausas
- Centro de Investigaciones sobre Desertificación, Spanish National Research Council (CIDE-CSIC), Ctra. Naquera Km. 4.5 (IVIA), Montcada, 46113, Valencia, Spain
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36
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Krause T, Tilker A. How the loss of forest fauna undermines the achievement of the SDGs. AMBIO 2022; 51:103-113. [PMID: 33825158 PMCID: PMC8023557 DOI: 10.1007/s13280-021-01547-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Revised: 12/30/2020] [Accepted: 02/18/2021] [Indexed: 06/12/2023]
Abstract
The human-driven loss of biodiversity has numerous ecological, social, and economic impacts at the local and global levels, threatening important ecological functions and jeopardizing human well-being. In this perspective, we present an overview of how tropical defaunation-defined as the disappearance of fauna as a result of anthropogenic drivers such as hunting and habitat alteration in tropical forest ecosystems-is interlinked with four selected Sustainable Development Goals (SDGs). We discuss tropical defaunation related to nutrition and zero hunger (SDG 2), good health and well-being (SDG 3), climate action (SDG 13), and life on land (SDG 15). We propose a range of options on how to study defaunation in future research and how to address the ongoing tropical defaunation crisis, including but not limited to recent insights from policy, conservation management, and development practice.
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Affiliation(s)
- Torsten Krause
- Lund University Centre for Sustainability Studies, P.O. Box 170, 221-00 Lund, Sweden
| | - Andrew Tilker
- Global Wildlife Conservation, 500 Capital of Texas Hwy, Austin, TX 78746 USA
- Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Straße 17, 10315 Berlin, Germany
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37
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Maurin KJL, Smissen RD, Lusk CH. A dated phylogeny shows Plio-Pleistocene climates spurred evolution of antibrowsing defences in the New Zealand flora. THE NEW PHYTOLOGIST 2022; 233:546-554. [PMID: 34610149 PMCID: PMC9298021 DOI: 10.1111/nph.17766] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Accepted: 09/24/2021] [Indexed: 06/13/2023]
Abstract
Some plant traits may be legacies of coevolution with extinct megafauna. One example is the convergent evolution of 'divaricate' cage architectures in many New Zealand lineages, interpreted as a response to recently extinct flightless avian browsers whose ancestors arrived during the Paleogene period. Although experiments have confirmed that divaricate habit deters extant browsers, its abundance on frosty, droughty sites appears consistent with an earlier interpretation as a response to cold, dry Plio-Pleistocene climates. We used 45 protein-coding sequences from plastid genomes to reconstruct the evolutionary history of the divaricate habit in extant New Zealand lineages. Our dated phylogeny of 215 species included 91% of New Zealand eudicot divaricate species. We show that 86% of extant divaricate plants diverged from non-divaricate sisters within the last 5 Ma, implicating Plio-Pleistocene climates in the proliferation of cage architectures in New Zealand. Our results, combined with other recent findings, are consistent with the synthetic hypothesis that the browser-deterrent effect of cage architectures was strongly selected only when Plio-Pleistocene climatic constraints prevented woody plants from growing quickly out of reach of browsers. This is consistent with the abundance of cage architectures in other regions where plant growth is restricted by aridity or short frost-free periods.
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Affiliation(s)
| | - Rob D. Smissen
- Allan HerbariumManaaki Whenua – Landcare ResearchLincoln7640New Zealand
| | - Christopher H. Lusk
- Environmental Research InstituteThe University of WaikatoHamilton3240New Zealand
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38
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Pascual-Rico R, Morales-Reyes Z, Aguilera-Alcalá N, Olszańska A, Sebastián-González E, Naidoo R, Moleón M, Lozano J, Botella F, von Wehrden H, Martín-López B, Sánchez-Zapata JA. Usually hated, sometimes loved: A review of wild ungulates' contributions to people. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 801:149652. [PMID: 34438159 DOI: 10.1016/j.scitotenv.2021.149652] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Revised: 08/08/2021] [Accepted: 08/10/2021] [Indexed: 06/13/2023]
Abstract
Nature's contributions to people (NCP) may be both beneficial and detrimental to humans' quality of life. Since our origins, humans have been closely related to wild ungulates, which have traditionally played an outstanding role as a source of food or raw materials. Currently, wild ungulates are declining in some regions, but recovering in others throughout passive rewilding processes. This is reshaping human-ungulate interactions. Thus, adequately understanding the benefits and detriments associated with wild ungulate populations is necessary to promote human-ungulate co-existence. Here, we reviewed 575 articles (2000-2019) on human-wild ungulate interactions to identify key knowledge gaps on NCP associated with wild ungulates. Wild ungulate research was mainly distributed into seven research clusters focussing on: (1) silvicultural damage in Eurasia; (2) herbivory and natural vegetation; (3) conflicts in urban areas of North America; (4) agricultural damage in Mediterranean agro-ecosystems; (5) social research in Africa and Asia; (6) agricultural damage in North America; (7) research in natural American Northwest areas. Research mostly focused on detrimental NCP. However, the number of publications mentioning beneficial contributions increased after the Intergovernmental Science-Policy Platform on Biodiversity and Ecosystem Services conceptual framework was implemented. Human-ungulate interactions' research was biased towards the Global North and Cervidae, Suidae and Bovidae families. Regarding detrimental NCP, most publications referred to production damage (e.g. crops), followed by biodiversity damage, and material damage (e.g. traffic collisions). Regarding beneficial NCP, publications mainly highlighted non-material contributions (e.g. recreational hunting), followed by material NCP and regulating contributions (e.g. habitat creation). The main actions taken to manage wild ungulate populations were lethal control and using deterrents and barriers (e.g. fencing), which effectiveness was rarely assessed. Increasing research and awareness about beneficial NCP and effective management tools may help to improve the conservation of wild ungulates and the ecosystems they inhabit to facilitate people-ungulate co-existence in the Anthropocene.
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Affiliation(s)
- Roberto Pascual-Rico
- Instituto de Investigación en Recursos Cinegéticos (IREC - CSIC, UCLM, JCCM), Ronda de Toledo, 12, 13071 Ciudad Real, Spain; Department of Applied Biology, Miguel Hernández University of Elche, Avda. de la Universidad, s/n, 03202 Elche, Spain
| | - Zebensui Morales-Reyes
- Department of Applied Biology, Miguel Hernández University of Elche, Avda. de la Universidad, s/n, 03202 Elche, Spain; Centro de Investigación e Innovación Agroalimentaria y Agroambiental (CIAGRO-UMH), Universidad Miguel Hernández de Elche, Elche, Spain.
| | - Natividad Aguilera-Alcalá
- Department of Applied Biology, Miguel Hernández University of Elche, Avda. de la Universidad, s/n, 03202 Elche, Spain; Centro de Investigación e Innovación Agroalimentaria y Agroambiental (CIAGRO-UMH), Universidad Miguel Hernández de Elche, Elche, Spain
| | - Agnieszka Olszańska
- Institute of Nature Conservation Polish Academy of Sciences, Al. Adama Mickiewicza 33, 31-120 Krakow, Poland
| | - Esther Sebastián-González
- Department of Applied Biology, Miguel Hernández University of Elche, Avda. de la Universidad, s/n, 03202 Elche, Spain; Department of Ecology, University of Alicante, Ctra San Vicente del Raspeig, s/n, 03690 San Vicente del Raspeig, Alicante, Spain
| | - Robin Naidoo
- WWF-US, 1250 24th Street NW, Washington, DC 20037, USA; Institute of Resources, Environment and Sustainability, University of British Columbia, Vancouver, BC VfT 1Z4, Canada
| | - Marcos Moleón
- Department of Zoology, University of Granada, Av. de Fuentenueva, s/n, 18071 Granada, Spain
| | - Jorge Lozano
- Departamento de Biodiversidad, Ecología y Evolución, Universidad Complutense de Madrid, C/José Antonio Novais 12, 28040 Madrid, Spain
| | - Francisco Botella
- Department of Applied Biology, Miguel Hernández University of Elche, Avda. de la Universidad, s/n, 03202 Elche, Spain; Centro de Investigación e Innovación Agroalimentaria y Agroambiental (CIAGRO-UMH), Universidad Miguel Hernández de Elche, Elche, Spain
| | - Henrik von Wehrden
- Faculty of Sustainability, Leuphana University of Lüneburg, Universitätsallee 1, 21335 Lüneburg, Germany
| | - Berta Martín-López
- Faculty of Sustainability, Leuphana University of Lüneburg, Universitätsallee 1, 21335 Lüneburg, Germany
| | - José A Sánchez-Zapata
- Department of Applied Biology, Miguel Hernández University of Elche, Avda. de la Universidad, s/n, 03202 Elche, Spain; Centro de Investigación e Innovación Agroalimentaria y Agroambiental (CIAGRO-UMH), Universidad Miguel Hernández de Elche, Elche, Spain
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39
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Farrell MJ, Park AW, Cressler CE, Dallas T, Huang S, Mideo N, Morales-Castilla I, Davies TJ, Stephens P. The ghost of hosts past: impacts of host extinction on parasite specificity. Philos Trans R Soc Lond B Biol Sci 2021; 376:20200351. [PMID: 34538147 PMCID: PMC8450631 DOI: 10.1098/rstb.2020.0351] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/11/2021] [Indexed: 11/29/2022] Open
Abstract
A growing body of research is focused on the extinction of parasite species in response to host endangerment and declines. Beyond the loss of parasite species richness, host extinction can impact apparent parasite host specificity, as measured by host richness or the phylogenetic distances among hosts. Such impacts on the distribution of parasites across the host phylogeny can have knock-on effects that may reshape the adaptation of both hosts and parasites, ultimately shifting the evolutionary landscape underlying the potential for emergence and the evolution of virulence across hosts. Here, we examine how the reshaping of host phylogenies through extinction may impact the host specificity of parasites, and offer examples from historical extinctions, present-day endangerment, and future projections of biodiversity loss. We suggest that an improved understanding of the impact of host extinction on contemporary host-parasite interactions may shed light on core aspects of disease ecology, including comparative studies of host specificity, virulence evolution in multi-host parasite systems, and future trajectories for host and parasite biodiversity. This article is part of the theme issue 'Infectious disease macroecology: parasite diversity and dynamics across the globe'.
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Affiliation(s)
- Maxwell J. Farrell
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada
| | | | - Clayton E. Cressler
- School of Biological Sciences, University of Nebraska, Lincoln, NE 68588, USA
| | - Tad Dallas
- Department of Biological Sciences, Louisiana State University, Baton Rouge, LA 70806, USA
- Department of Biological Sciences, University of South Carolina, Columbia, SC, 29208, USA
| | - Shan Huang
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Frankfurt am Main, Germany
| | - Nicole Mideo
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada
| | - Ignacio Morales-Castilla
- Universidad de Alcalá, GloCEE - Global Change Ecology and Evolution Research Group, Departamento de Ciencias de la Vida, 28805 Alcalá de Henares, Madrid, Spain
| | - T. Jonathan Davies
- Department of Botany, University of British Columbia, Vancouver, BC, Canada, V6T 1Z4
- Department of Forest and Conservation Sciences, University of British Columbia, Vancouver, BC, Canada, V6T 1Z4
- Department of Botany and Plant Biotechnology, African Centre for DNA Barcoding, University of Johannesburg, Johannesburg 2092, South Africa
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40
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Rogers HS, Donoso I, Traveset A, Fricke EC. Cascading Impacts of Seed Disperser Loss on Plant Communities and Ecosystems. ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS 2021. [DOI: 10.1146/annurev-ecolsys-012221-111742] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Seed dispersal is key to the persistence and spread of plant populations. Because the majority of plant species rely on animals to disperse their seeds, global change drivers that directly affect animals can cause cascading impacts on plant communities. In this review, we synthesize studies assessing how disperser loss alters plant populations, community patterns, multitrophic interactions, and ecosystem functioning. We argue that the magnitude of risk to plants from disperser loss is shaped by the combination of a plant species’ inherent dependence on seed dispersal and the severity of the hazards faced by their dispersers. Because the factors determining a plant species’ risk of decline due to disperser loss can be related to traits of the plants and dispersers, our framework enables a trait-based understanding of change in plant community composition and ecosystem functioning. We discuss how interactions among plants, among dispersers, and across other trophic levels also mediate plant community responses, and we identify areas for future research to understand and mitigate the consequences of disperser loss on plants globally.
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Affiliation(s)
- Haldre S. Rogers
- Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa 50011, USA
| | - Isabel Donoso
- Global Change Research Group, Mediterranean Institute for Advanced Studies, 07190 Esporles, Mallorca, Balearic Islands, Spain
- Senckenberg Biodiversity and Climate Research Centre, 60325 Frankfurt am Main, Germany
| | - Anna Traveset
- Global Change Research Group, Mediterranean Institute for Advanced Studies, 07190 Esporles, Mallorca, Balearic Islands, Spain
| | - Evan C. Fricke
- Department of BioSciences, Rice University, Houston, Texas 77005, USA
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41
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Fløjgaard C, Pedersen PBM, Sandom CJ, Svenning J, Ejrnæs R. Exploring a natural baseline for large‐herbivore biomass in ecological restoration. J Appl Ecol 2021. [DOI: 10.1111/1365-2664.14047] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Camilla Fløjgaard
- Department of Ecoscience Section for Biodiversity and Conservation Aarhus University Rønde Denmark
| | - Pil Birkefeldt Møller Pedersen
- Department of Biology Center for Biodiversity Dynamics in a Changing World (BIOCHANGE) Aarhus University Aarhus C Denmark
- Section for Ecoinformatics and Biodiversity Department of Biology Aarhus University Aarhus C Denmark
- Center for Landscape and Climate Research University of Leicester Leicester UK
| | | | - Jens‐Christian Svenning
- Department of Biology Center for Biodiversity Dynamics in a Changing World (BIOCHANGE) Aarhus University Aarhus C Denmark
- Section for Ecoinformatics and Biodiversity Department of Biology Aarhus University Aarhus C Denmark
| | - Rasmus Ejrnæs
- Department of Ecoscience Section for Biodiversity and Conservation Aarhus University Rønde Denmark
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42
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Li BV, Jiang B. Responses of forest structure, functions, and biodiversity to livestock disturbances: A global meta-analysis. GLOBAL CHANGE BIOLOGY 2021; 27:4745-4757. [PMID: 34322964 DOI: 10.1111/gcb.15781] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 06/07/2021] [Accepted: 06/09/2021] [Indexed: 06/13/2023]
Abstract
Habitat degradation and land-use change driven by the livestock sector are among the major causes of global biodiversity loss. Forests are crucial in maintaining biodiversity and mitigating climate change. Apart from continuing deforestation, forests also face increasing pressure from livestock grazing in the system, which is less understood compared to grasslands. Through a meta-analysis of 156 articles with 1936 data entries, this study assesses the effect of livestock on forest biodiversity, structure, and functions, varying with livestock types, livestock density, grazing history, and climatic factors. Our results show that livestock overall had a negative impact on the forest structure and functions, reduced species abundance but increased richness. Medium and large mammals, plant communities, and soil were more negatively affected compared to other groups such as birds and invertebrates. Livestock also influenced the role of forests in mitigating climate change. They changed forest carbon stock by reducing plant biomass; however, they did not significantly impact the soil carbon stock or soil greenhouse gas emissions. Ecosystem attributes were more affected in warmer and drier regions and by single species grazing than the mixed grazing. Past livestock grazing history moderates the impacts of livestock, with the strongest negative effect occurred with a history of 1-5 years. Nonetheless, livestock activities also had a positive impact on forest management, such as reducing forest flammability. Our results also indicate the lack of studies on how higher trophic levels respond to livestock disturbances and how grazing intensity moderates the effect, which includes grazing duration and livestock density. The complex responses of forests to livestock in different conditions call for more adaptive management depending on the conservation targets and evolution history.
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Affiliation(s)
- Binbin V Li
- Environmental Research Centre, Duke Kunshan University, Kunshan, Jiangsu, China
- Nicholas School of Environment, Duke University, Durham, NC, USA
| | - Bingkun Jiang
- Environmental Research Centre, Duke Kunshan University, Kunshan, Jiangsu, China
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43
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Dussex N, Bergfeldt N, de Anca Prado V, Dehasque M, Díez-Del-Molino D, Ersmark E, Kanellidou F, Larsson P, Lemež Š, Lord E, Mármol-Sánchez E, Meleg IN, Måsviken J, Naidoo T, Studerus J, Vicente M, von Seth J, Götherström A, Dalén L, Heintzman PD. Integrating multi-taxon palaeogenomes and sedimentary ancient DNA to study past ecosystem dynamics. Proc Biol Sci 2021; 288:20211252. [PMID: 34428961 PMCID: PMC8385357 DOI: 10.1098/rspb.2021.1252] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Ancient DNA (aDNA) has played a major role in our understanding of the past. Important advances in the sequencing and analysis of aDNA from a range of organisms have enabled a detailed understanding of processes such as past demography, introgression, domestication, adaptation and speciation. However, to date and with the notable exception of microbiomes and sediments, most aDNA studies have focused on single taxa or taxonomic groups, making the study of changes at the community level challenging. This is rather surprising because current sequencing and analytical approaches allow us to obtain and analyse aDNA from multiple source materials. When combined, these data can enable the simultaneous study of multiple taxa through space and time, and could thus provide a more comprehensive understanding of ecosystem-wide changes. It is therefore timely to develop an integrative approach to aDNA studies by combining data from multiple taxa and substrates. In this review, we discuss the various applications, associated challenges and future prospects of such an approach.
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Affiliation(s)
- Nicolas Dussex
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Nora Bergfeldt
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | | | - Marianne Dehasque
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - David Díez-Del-Molino
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden
| | - Erik Ersmark
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden
| | - Foteini Kanellidou
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden
| | - Petter Larsson
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden
| | - Špela Lemež
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden
| | - Edana Lord
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Emilio Mármol-Sánchez
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Science for Life Laboratory, Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Stockholm, Sweden
| | - Ioana N Meleg
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden.,'Emil Racoviță' Institute of Speleology of the Romanian Academy, Calea 13 Septembrie, nr. 13, 050711, Sector 5, Bucharest, Romania.,Emil. G. Racoviță Institute, Babeș-Bolyai University, Clinicilor 5-7, 400006 Cluj-Napoca, Romania
| | - Johannes Måsviken
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Thijessen Naidoo
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden.,Ancient DNA Unit, SciLifeLab, Stockholm and Uppsala, Sweden
| | - Jovanka Studerus
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden
| | - Mário Vicente
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden
| | - Johanna von Seth
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Anders Götherström
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Archaeology and Classical Studies, Stockholm University, Stockholm, Sweden
| | - Love Dalén
- Centre for Palaeogenetics, Svante Arrhenius väg 20C, 10691 Stockholm, Sweden.,Department of Zoology, Stockholm University, Stockholm, Sweden.,Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Peter D Heintzman
- The Arctic University Museum of Norway, The Arctic University of Norway, 9037 Tromsø, Norway
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44
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Ge D, Feijó A, Wen Z, Abramov AV, Lu L, Cheng J, Pan S, Ye S, Xia L, Jiang X, Vogler AP, Yang Q. Demographic History and Genomic Response to Environmental Changes in a Rapid Radiation of Wild Rats. Mol Biol Evol 2021; 38:1905-1923. [PMID: 33386846 PMCID: PMC8097305 DOI: 10.1093/molbev/msaa334] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Abstract
For organisms to survive and prosper in a harsh environment, particularly under rapid climate change, poses tremendous challenges. Recent studies have highlighted the continued loss of megafauna in terrestrial ecosystems and the subsequent surge of small mammals, such as rodents, bats, lagomorphs, and insectivores. However, the ecological partitioning of these animals will likely lead to large variation in their responses to environmental change. In the present study, we investigated the evolutionary history and genetic adaptations of white-bellied rats (Niviventer Marshall, 1976), which are widespread in the natural terrestrial ecosystems in Asia but also known as important zoonotic pathogen vectors and transmitters. The southeastern Qinghai-Tibet Plateau was inferred as the origin center of this genus, with parallel diversification in temperate and tropical niches. Demographic history analyses from mitochondrial and nuclear sequences of Niviventer demonstrated population size increases and range expansion for species in Southeast Asia, and habitat generalists elsewhere. Unexpectedly, population increases were seen in N. eha, which inhabits the highest elevation among Niviventer species. Genome scans of nuclear exons revealed that among the congeneric species, N. eha has the largest number of positively selected genes. Protein functions of these genes are mainly related to olfaction, taste, and tumor suppression. Extensive genetic modification presents a major strategy in response to global changes in these alpine species.
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Affiliation(s)
- Deyan Ge
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, China
| | - Anderson Feijó
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, China
| | - Zhixin Wen
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, China
| | - Alexei V Abramov
- Zoological Institute, Russian Academy of Sciences, Saint Petersburg, Russia.,Joint Russian-Vietnamese Tropical Research and Technological Centre, Hanoi, Vietnam
| | - Liang Lu
- State Key Laboratory for Infectious Diseases Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Jilong Cheng
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, China
| | - Shengkai Pan
- CAS Key Lab of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
| | - Sicheng Ye
- Center for Computational Genomics, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China
| | - Lin Xia
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, China
| | - Xuelong Jiang
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, China
| | - Alfried P Vogler
- Department of Life Sciences, Natural History Museum, London, United Kingdom.,Department of Life Sciences, Imperial College London, Silwood Park Campus, Ascot, United Kingdom
| | - Qisen Yang
- Key Laboratory of Zoological Systematics and Evolution, Institute of Zoology, Chinese Academy of Sciences, Chaoyang District, Beijing, China
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Dharmarajan G, Gupta P, Vishnudas CK, Robin VV. Anthropogenic disturbance favours generalist over specialist parasites in bird communities: Implications for risk of disease emergence. Ecol Lett 2021; 24:1859-1868. [PMID: 34120404 DOI: 10.1111/ele.13818] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 04/10/2021] [Accepted: 05/03/2021] [Indexed: 11/27/2022]
Abstract
Niche theory predicts specialists which will be more sensitive to environmental perturbation compared to generalists, a hypothesis receiving broad support in free-living species. Based on their niche breadth, parasites can also be classified as specialists and generalists, with specialists infecting only a few and generalists a diverse array of host species. Here, using avian haemosporidian parasites infecting wild bird populations inhabiting the Western Ghats, India as a model system, we elucidate how climate, habitat and human disturbance affects parasite prevalence both directly and indirectly via their effects on host diversity. Our data demonstrate that anthropogenic disturbance acts to reduce the prevalence of specialist parasite lineages, while increasing that of generalist lineages. Thus, as in free-living species, disturbance favours parasite communities dominated by generalist versus specialist species. Because generalist parasites are more likely to cause emerging infectious diseases, such biotic homogenisation of parasite communities could increase disease emergence risk in the Anthropocene.
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Affiliation(s)
- Guha Dharmarajan
- Savannah River Ecology Laboratory, University of Georgia, Aiken, SC, USA.,Indian Institute of Science Education and Research Kolkata, Mohanpur, West Bengal, India
| | - Pooja Gupta
- Savannah River Ecology Laboratory, University of Georgia, Aiken, SC, USA.,Indian Institute of Science Education and Research Kolkata, Mohanpur, West Bengal, India
| | - C K Vishnudas
- Indian Institute of Science Education and Research Tirupati, Tirupati, Andhra Pradesh, India
| | - V V Robin
- Indian Institute of Science Education and Research Tirupati, Tirupati, Andhra Pradesh, India
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Schou JS, Bladt J, Ejrnæs R, Thomsen MN, Vedel SE, Fløjgaard C. Economic assessment of rewilding versus agri-environmental nature management. AMBIO 2021; 50:1047-1057. [PMID: 33191487 PMCID: PMC8035355 DOI: 10.1007/s13280-020-01423-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 09/10/2020] [Accepted: 10/21/2020] [Indexed: 06/11/2023]
Abstract
Policies aiming at improving biodiversity often consist of costly agri-environmental schemes, i.e. subsidized grazing or mowing of semi-natural areas. However, these practices have widely been found to be insufficient to mitigate biodiversity loss. Rewilding, i.e. restoring natural processes in self-sustaining biodiverse ecosystems, has been proposed as an alternative and is hypothesized to be a more cost-efficient approach to promote biodiversity conservation. Rewilding requires the availability of large natural areas which are not allocated for farming, forestry, and infrastructure to avoid potential conflicts over the use of the area. We perform an ex-ante private cost-benefit analysis of the establishment of four large nature reserves for rewilding in Denmark. We analyse the economic effects of changing from summer grazing in nature areas in combination with cultivated fields and forestry to the establishment of nature reserves in four case areas. We consider two scenarios involving conversion of agriculture and forestry areas into natural areas in combination with either extensive year-round cattle grazing or rewilding with wild large herbivores. In two case areas, it appears possible to establish large nature areas without incurring extra costs. Additionally, rewilding further reduces costs compared to year-round cattle grazing. Two opposing effects were dominant: increased economic rent occurred from the shift from summer grazing to year-round grazing or rewilding, while cessation of agriculture and forestry caused opportunity costs.
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Affiliation(s)
- Jesper Sølver Schou
- Institute of Food and Resource Economics, University of Copenhagen, Rolighedsvej 25, 1958 Frederiksberg C, Denmark
| | - Jesper Bladt
- Institute for Bioscience, Aarhus University, Grenåvej 14, 8410 Rønde, Denmark
| | - Rasmus Ejrnæs
- Institute for Bioscience, Aarhus University, Grenåvej 14, 8410 Rønde, Denmark
| | | | | | - Camilla Fløjgaard
- Institute for Bioscience, Aarhus University, Grenåvej 14, 8410 Rønde, Denmark
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Konvička M, Ričl D, Vodičková V, Beneš J, Jirků M. Restoring a butterfly hot spot by large ungulates refaunation: the case of the Milovice military training range, Czech Republic. BMC Ecol Evol 2021; 21:73. [PMID: 33931041 PMCID: PMC8086344 DOI: 10.1186/s12862-021-01804-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Accepted: 04/22/2021] [Indexed: 11/27/2022] Open
Abstract
Background Refaunation/rewilding by large ungulates represents a cost-efficient approach to managing natural biotopes and may be particularly useful for areas whose biodiversity depends on disturbance dynamics and is imperilled by successional changes. To study impacts of refaunation on invertebrates, we focused on butterflies inhabiting the former military training range Milovice, Czech Republic, refaunated since 2015 by a combination of Exmoor pony (“wild” horse), Tauros cattle (“aurochs”), and European wisent. Methods We analysed butterfly presence-absence patterns immediately after the military use termination (early 1990s), prior to the refaunation (2009), and after it (2016–19); and current abundance data gained by monitoring butterflies at refaunated and neglected plots. We used correspondence analysis for the presence-absence comparison and canonical correspondence analysis for the current monitoring, and related results of both ordination methods to the life history and climatic traits, and conservation-related attributes, of recorded butterflies. Results Following the termination of military use, several poorly mobile species inclining towards oceanic climates were lost. Newly gained are mobile species preferring warmer continental conditions. The refaunated plots hosted higher butterfly species richness and abundances. Larger-bodied butterflies developing on coarse grasses and shrubs inclined towards neglected plots, whereas refaunated plots supported smaller species developing on small forbs. Conclusion The changes in species composition following the cessation of military use were attributable to successional change, coupled with changes in species pool operating at larger scales. By blocking succession, large ungulates support butterflies depending on competitively poor plants. Restoring large ungulates populations represents a great hope for conserving specialised insects, provided that settings of the projects, and locally adapted ungulate densities, do not deplete resources for species with often contrasting requirements. Supplementary Information The online version contains supplementary material available at 10.1186/s12862-021-01804-x.
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Affiliation(s)
- Martin Konvička
- Faculty of Sciences, University South Bohemia, Branišovská 31, 37005, České Budějovice, Czech Republic. .,Biology Centre, Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 37005, České Budějovice, Czech Republic.
| | | | - Veronika Vodičková
- Faculty of Sciences, University South Bohemia, Branišovská 31, 37005, České Budějovice, Czech Republic
| | - Jiří Beneš
- Biology Centre, Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 37005, České Budějovice, Czech Republic
| | - Miloslav Jirků
- Biology Centre, Czech Academy of Sciences, Institute of Entomology, Branišovská 31, 37005, České Budějovice, Czech Republic.,European Wildlife, Šultysova 170, 28401, Kutná Hora, Czech Republic.,Česká Krajina O.P.S., Šultysova 170, 28401, Kutná Hora, Czech Republic
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48
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Amiot C, Ji W, Ellis EC, Anderson MG. Temporal and sociocultural effects of human colonisation on native biodiversity: filtering and rates of adaptation. OIKOS 2021. [DOI: 10.1111/oik.07615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Christophe Amiot
- Human Wildlife Interaction Research Group, Inst. of Natural and Mathematical Sciences, Massey Univ. Albany New Zealand
- UMR 6554 CNRS, LETG–Angers, Univ. d'Angers Angers France
| | - Weihong Ji
- Human Wildlife Interaction Research Group, Inst. of Natural and Mathematical Sciences, Massey Univ. Albany New Zealand
| | - Erle C. Ellis
- Dept of Geography and Environmental Systems, Univ. of Maryland Baltimore County Baltimore USA
| | - Michael G. Anderson
- Ecology, Behaviour and Conservation Group, Inst. of Natural and Mathematical Sciences, Massey Univ. Albany New Zealand
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49
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Rohwer Y, Marris E. Ecosystem integrity is neither real nor valuable. CONSERVATION SCIENCE AND PRACTICE 2021. [DOI: 10.1111/csp2.411] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Affiliation(s)
- Yasha Rohwer
- Department of Humanities and Social Sciences Oregon Institute of Technology Klamath Falls Oregon USA
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50
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Spengler RN, Petraglia M, Roberts P, Ashastina K, Kistler L, Mueller NG, Boivin N. Exaptation Traits for Megafaunal Mutualisms as a Factor in Plant Domestication. FRONTIERS IN PLANT SCIENCE 2021; 12:649394. [PMID: 33841476 PMCID: PMC8024633 DOI: 10.3389/fpls.2021.649394] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 02/25/2021] [Indexed: 05/26/2023]
Abstract
Megafaunal extinctions are recurring events that cause evolutionary ripples, as cascades of secondary extinctions and shifting selective pressures reshape ecosystems. Megafaunal browsers and grazers are major ecosystem engineers, they: keep woody vegetation suppressed; are nitrogen cyclers; and serve as seed dispersers. Most angiosperms possess sets of physiological traits that allow for the fixation of mutualisms with megafauna; some of these traits appear to serve as exaptation (preadaptation) features for farming. As an easily recognized example, fleshy fruits are, an exaptation to agriculture, as they evolved to recruit a non-human disperser. We hypothesize that the traits of rapid annual growth, self-compatibility, heavy investment in reproduction, high plasticity (wide reaction norms), and rapid evolvability were part of an adaptive syndrome for megafaunal seed dispersal. We review the evolutionary importance that megafauna had for crop and weed progenitors and discuss possible ramifications of their extinction on: (1) seed dispersal; (2) population dynamics; and (3) habitat loss. Humans replaced some of the ecological services that had been lost as a result of late Quaternary extinctions and drove rapid evolutionary change resulting in domestication.
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Affiliation(s)
- Robert N. Spengler
- Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany
| | - Michael Petraglia
- Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany
- Department of Anthropology, Smithsonian Institution, National Museum of Natural History, Washington, DC, United States
- School of Social Science, The University of Queensland, Brisbane, QLD, Australia
| | - Patrick Roberts
- Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany
| | - Kseniia Ashastina
- Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany
| | - Logan Kistler
- Department of Anthropology, Smithsonian Institution, National Museum of Natural History, Washington, DC, United States
| | - Natalie G. Mueller
- Department of Archaeology, Washington University in St. Louis, St. Louis, MO, United States
| | - Nicole Boivin
- Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany
- Department of Anthropology, Smithsonian Institution, National Museum of Natural History, Washington, DC, United States
- School of Social Science, The University of Queensland, Brisbane, QLD, Australia
- Department of Anthropology and Archaeology, University of Calgary, Calgary, AB, Canada
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