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Ceasar SA, Prabhu S, Ebeed HT. Protein research in millets: current status and way forward. PLANTA 2024; 260:43. [PMID: 38958760 DOI: 10.1007/s00425-024-04478-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2024] [Accepted: 06/27/2024] [Indexed: 07/04/2024]
Abstract
MAIN CONCLUSION Millets' protein studies are lagging behind those of major cereals. Current status and future insights into the investigation of millet proteins are discussed. Millets are important small-seeded cereals majorly grown and consumed by people in Asia and Africa and are considered crops of future food security. Although millets possess excellent climate resilience and nutrient supplementation properties, their research advancements have been lagging behind major cereals. Although considerable genomic resources have been developed in recent years, research on millet proteins and proteomes is currently limited, highlighting a need for further investigation in this area. This review provides the current status of protein research in millets and provides insights to understand protein responses for climate resilience and nutrient supplementation in millets. The reference proteome data is available for sorghum, foxtail millet, and proso millet to date; other millets, such as pearl millet, finger millet, barnyard millet, kodo millet, tef, and browntop millet, do not have any reference proteome data. Many studies were reported on stress-responsive protein identification in foxtail millet, with most studies on the identification of proteins under drought-stress conditions. Pearl millet has a few reports on protein identification under drought and saline stress. Finger millet is the only other millet to have a report on stress-responsive (drought) protein identification in the leaf. For protein localization studies, foxtail millet has a few reports. Sorghum has the highest number of 40 experimentally proven crystal structures, and other millets have fewer or no experimentally proven structures. Further proteomics studies will help dissect the specific proteins involved in climate resilience and nutrient supplementation and aid in breeding better crops to conserve food security.
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Affiliation(s)
- S Antony Ceasar
- Division of Plant Molecular Biology and Biotechnology, Department of Biosciences, Rajagiri College of Social Sciences, Cochin, Kerala, 683 104, India.
| | - Srinivasan Prabhu
- Division of Phytochemistry and Drug Design, Department of Biosciences, Rajagiri College of Social Sciences, Cochin, Kerala, 683 104, India
| | - Heba T Ebeed
- Botany and Microbiology Department, Faculty of Science, Damietta University, Damietta, Egypt
- National Biotechnology Network of Expertise (NBNE), Academy of Scientific Research and Technology (ASRT), Cairo, Egypt
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2
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Farouk AS, Abdelghany AM, Shehab AA, Alwakel SE, Makled KM, Naif E, Ren H, Lamlom SF. Optimizing wheat productivity through integrated management of irrigation, nutrition, and organic amendments. BMC PLANT BIOLOGY 2024; 24:548. [PMID: 38872106 DOI: 10.1186/s12870-024-05213-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 05/29/2024] [Indexed: 06/15/2024]
Abstract
Enhancing wheat productivity by implementing a comprehensive approach that combines irrigation, nutrition, and organic amendments shows potential for collectively enhancing crop performance. This study examined the individual and combined effects of using irrigation systems (IS), foliar potassium bicarbonate (PBR) application, and compost application methods (CM) on nine traits related to the growth, physiology, and yield of the Giza-171 wheat cultivar. Analysis of variance revealed significant (P ≤ 0.05) main effects of IS, PBR, and CM on wheat growth, physiology, and yield traits over the two growing seasons of the study. Drip irrigation resulted in a 16% increase in plant height, leaf area index, crop growth rate, yield components, and grain yield compared to spray irrigation. Additionally, the application of foliar PBR at a concentration of 0.08 g/L boosted these parameters by up to 22% compared to the control. Furthermore, the application of compost using the role method resulted in enhanced wheat performance compared to the treatment including mix application. Importantly, the combined analysis revealed that the three-way interaction between the three factors had a significant effect (P ≤ 0.05) on all the studied traits, with drip irrigation at 0.08 g PBR rate and role compost application method (referred as Drip_0.08g_Role) resulting in the best performance across all traits, while sprinkle irrigation without PBR and conventional mixed compost method (referred as sprinkle_CK_Mix) produced the poorest results. This highlights the potential to synergistically improve wheat performance through optimized agronomic inputs.
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Affiliation(s)
- A S Farouk
- Agronomy Department, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Ahmed M Abdelghany
- Crop Science Department, Faculty of Agriculture, Damanhour University, Damanhour, Egypt
| | - A A Shehab
- Agronomy Department, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Sh E Alwakel
- Agronomy Department, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Khaled M Makled
- Agronomy Department, Faculty of Agriculture, Al-Azhar University, Cairo, Egypt
| | - Eman Naif
- Crop Science Department, Faculty of Agriculture, Damanhour University, Damanhour, Egypt
| | - Honglei Ren
- Heilongjiang Academy of Agricultural Sciences, Soybean Research Institute, Harbin, 150086, China
| | - Sobhi F Lamlom
- Plant Production Department, Faculty of Agriculture Saba Basha, Alexandria University, Alexandria, 21531, Egypt.
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Shaheen N, Hasan T, Sultana M, Akhter KT, Khan IN, Irfan NM, Ahmed MK. Carcinogenic and non-carcinogenic health hazards of potentially toxic elements in commonly consumed rice cultivars in Dhaka city, Bangladesh. PLoS One 2024; 19:e0303305. [PMID: 38743648 PMCID: PMC11093395 DOI: 10.1371/journal.pone.0303305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Accepted: 04/23/2024] [Indexed: 05/16/2024] Open
Abstract
The study aimed to assess the level of potentially toxic elements (As, Cd, Pb, Zn, Cu, Cr, Mn, and Ni) and associated health implications through commonly consumed rice cultivars of Bangladesh available in Capital city, Dhaka. The range of As, Cd, Pb, Zn, Cu, Cr, Mn, and Ni in rice grains were 0.04-0.35, 0.01-0.15, 0.01-1.18, 10.74-34.35, 1.98-13.42, 0.18-1.43, 2.51-22.08, and 0.21-5.96 mg/kg fresh weight (FW), respectively. The principal component analysis (PCA) identified substantial anthropogenic activities to be responsible for these elements in rice grains. The estimated daily intake (EDI) of the elements was below the maximum tolerable daily intake (MTDI) level. The hazard index (HI) was above the threshold level, stating non-carcinogenic health hazards from consuming these rice cultivars. The mean target cancer risk (TCR) of As and Pb exceeded the USEPA acceptable level (10-6), revealing carcinogenic health risks from the rice grains.
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Affiliation(s)
- Nazma Shaheen
- Institute of Nutrition and Food Science, University of Dhaka, Dhaka, Bangladesh
| | - Towhid Hasan
- Department of Food Technology and Nutrition Science, Noakhali Science and Technology University, Noakhali, Bangladesh
| | - Marjia Sultana
- Department of Food Technology and Nutrition Science, Noakhali Science and Technology University, Noakhali, Bangladesh
| | - Kazi Turjaun Akhter
- Institute of Nutrition and Food Science, University of Dhaka, Dhaka, Bangladesh
| | - Ishrat Nourin Khan
- Institute of Nutrition and Food Science, University of Dhaka, Dhaka, Bangladesh
- Interdisciplinary Graduate Program in Human Toxicology, University of Iowa, Iowa, Iowa, United States of America
| | - Nafis Md. Irfan
- Institute of Nutrition and Food Science, University of Dhaka, Dhaka, Bangladesh
- Interdisciplinary Graduate Program in Human Toxicology, University of Iowa, Iowa, Iowa, United States of America
- Department of Internal Medicine, University of Iowa, Iowa, Iowa, United States of America
| | - Md. Kawser Ahmed
- Department of Oceanography, University of Dhaka, Dhaka, Bangladesh
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Skevaki C, Nadeau KC, Rothenberg ME, Alahmad B, Mmbaga BT, Masenga GG, Sampath V, Christiani DC, Haahtela T, Renz H. Impact of climate change on immune responses and barrier defense. J Allergy Clin Immunol 2024; 153:1194-1205. [PMID: 38309598 DOI: 10.1016/j.jaci.2024.01.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Revised: 01/16/2024] [Accepted: 01/18/2024] [Indexed: 02/05/2024]
Abstract
Climate change is not just jeopardizing the health of our planet but is also increasingly affecting our immune health. There is an expanding body of evidence that climate-related exposures such as air pollution, heat, wildfires, extreme weather events, and biodiversity loss significantly disrupt the functioning of the human immune system. These exposures manifest in a broad range of stimuli, including antigens, allergens, heat stress, pollutants, microbiota changes, and other toxic substances. Such exposures pose a direct and indirect threat to our body's primary line of defense, the epithelial barrier, affecting its physical integrity and functional efficacy. Furthermore, these climate-related environmental stressors can hyperstimulate the innate immune system and influence adaptive immunity-notably, in terms of developing and preserving immune tolerance. The loss or failure of immune tolerance can instigate a wide spectrum of noncommunicable diseases such as autoimmune conditions, allergy, respiratory illnesses, metabolic diseases, obesity, and others. As new evidence unfolds, there is a need for additional research in climate change and immunology that covers diverse environments in different global settings and uses modern biologic and epidemiologic tools.
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Affiliation(s)
- Chrysanthi Skevaki
- Institute of Laboratory Medicine, member of the German Center for Lung Research and the Universities of Giessen and Marburg Lung Center, Philipps-University Marburg, Marburg, Germany
| | - Kari C Nadeau
- Department of Environmental Health, Harvard T.H. Chan School of Public Health, Harvard University, Boston, Mass
| | - Marc E Rothenberg
- Division of Allergy and Immunology, Department of Pediatrics, Cincinnati Children's Hospital Medical Center, University of Cincinnati College of Medicine, Cincinnati, Ohio
| | - Barrak Alahmad
- Department of Environmental Health, Harvard T.H. Chan School of Public Health, Harvard University, Boston, Mass; Dasman Diabetes Institute, Kuwait City, Kuwait
| | - Blandina T Mmbaga
- Kilimanjaro Christian Medical University College, Moshi, Tanzania; Kilimanjaro Clinical Research Institute, Moshi, Tanzania
| | - Gileard G Masenga
- Kilimanjaro Christian Medical University College, Moshi, Tanzania; Department of Obstetrics and Gynecology, Kilimanjaro Christian Medical Centre, Moshi, Tanzania
| | - Vanitha Sampath
- Department of Environmental Health, Harvard T.H. Chan School of Public Health, Harvard University, Boston, Mass
| | - David C Christiani
- Department of Environmental Health, Harvard T.H. Chan School of Public Health, Harvard University, Boston, Mass; Pulmonary and Critical Care Division, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, Mass
| | - Tari Haahtela
- Skin and Allergy Hospital, Helsinki University Hospital, University of Helsinki, Helsinki, Finland
| | - Harald Renz
- Institute of Laboratory Medicine, member of the German Center for Lung Research and the Universities of Giessen and Marburg Lung Center, Philipps-University Marburg, Marburg, Germany; Kilimanjaro Christian Medical University College, Moshi, Tanzania; Department of Clinical Immunology and Allergology, Laboratory of Immunopathology, Sechenov University, Moscow, Russia.
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5
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Nájera Espinosa S, Hadida G, Jelmar Sietsma A, Alae-Carew C, Turner G, Green R, Pastorino S, Picetti R, Scheelbeek P. Mapping the evidence of novel plant-based foods: a systematic review of nutritional, health, and environmental impacts in high-income countries. Nutr Rev 2024:nuae031. [PMID: 38657969 DOI: 10.1093/nutrit/nuae031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024] Open
Abstract
CONTEXT Shifting from current dietary patterns to diets rich in plant-based (PB) foods and lower in animal-based foods (ABFs) is generally regarded as a suitable strategy to improve nutritional health and reduce environmental impacts. Despite the recent growth in supply of and demand for novel plant-based foods (NPBFs), a comprehensive overview is lacking. OBJECTIVES This review provides a synthesis of available evidence, highlights challenges, and informs public health and environmental strategies for purposeful political decision-making by systematically searching, analyzing, and summarizing the available literature. DATA SOURCES Five peer-reviewed databases and grey literature sources were rigorously searched for publications. DATA EXTRACTION Study characteristics meeting the inclusion criteria regarding NPBF nutrient composition and health and environmental outcomes in high-income countries were extracted. DATA ANALYSIS Fifty-seven peer-reviewed and 36 grey literature sources were identified; these were published in 2016-2022. NPBFs typically have substantially lower environmental impacts than ABFs, but the nutritional contents are complex and vary considerably across brands, product type, and main primary ingredient. In the limited evidence on the health impacts, shifts from ABFs to PB meats were associated with positive health outcomes. However, results were mixed for PB drinks, with links to micronutrient deficiencies. CONCLUSION If carefully selected, certain NPBFs have the potential to be healthier and nutrient-rich alternatives to ABFs and typically have smaller environmental footprints. More disaggregated categorization of various types of NPBFs would be a helpful step in guiding consumers and key stakeholders to make informed decisions. To enable informed policymaking on the inclusion of NPBFs in dietary transitions as part of a wider net-zero and health strategy, future priorities should include nutritional food standards, labelling, and subdivisions or categorizations of NPBFs, as well as short- and long-term health studies evaluating dietary shifts from ABFs to NPBFs and standardized environmental impact assessments, ideally from independent funders.
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Affiliation(s)
- Sarah Nájera Espinosa
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Genevieve Hadida
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Anne Jelmar Sietsma
- Priestley International Centre for Climate, University of Leeds, Leeds, United Kingdom
| | - Carmelia Alae-Carew
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Grace Turner
- Department of Public Health, Environment and Society, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Rosemary Green
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
- Centre on Climate Change and Planetary Health, London School of Hygiene & Tropical Medicine, London, United Kingdom
| | - Silvia Pastorino
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
| | - Roberto Picetti
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
- Centre on Climate Change and Planetary Health, London School of Hygiene & Tropical Medicine, London, United Kingdom
| | - Pauline Scheelbeek
- Department of Population Health, London School of Hygiene and Tropical Medicine, London, United Kingdom
- Centre on Climate Change and Planetary Health, London School of Hygiene & Tropical Medicine, London, United Kingdom
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6
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Liu P, Feng W, Wang T, Zhang H, Mao S, Zhang H, Huang W, Liu H, Feng S, Chu Z. Investigation of Imidazolinone Herbicide Resistance Gene with KASP Markers for Japonica/ Geng Rice Varieties in the Huanghuaihai Region of China. PLANTS (BASEL, SWITZERLAND) 2024; 13:1097. [PMID: 38674507 PMCID: PMC11053791 DOI: 10.3390/plants13081097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Revised: 04/08/2024] [Accepted: 04/11/2024] [Indexed: 04/28/2024]
Abstract
Rice is a staple food for more than half of the global population due to its food security and sustainable development. Weeds compete with crops for sunlight and indispensable nutrients, affecting the yield and quality of crops. Breeding herbicide-tolerant rice varieties paired with herbicide application is expected to help with weed control. In this study, 194 Japonica/Geng rice varieties or lines collected from the Huanghuaihai region of China were screened by Kompetitive Allele-Specific PCR (KASP) markers based on four mutation sites within OsALS1 (LOC_Os02g30630), which is the target of imidazolinone (IMI) herbicides. Only the OsALS1627N haplotype was identified in 18 varieties, including the previously reported Jingeng818 (JG818), and its herbicide resistance was validated by treatment with three IMIs. To investigate the origin of the OsALS1627N haplotype in the identified varieties, six codominant PCR-based markers tightly linked with OsALS1 were developed. PCR analysis revealed that the other 17 IMI-tolerant varieties were derived from JG818. We randomly selected three IMI-tolerant varieties for comparative whole-genome resequencing with known receptor parent varieties. Sequence alignment revealed that more loci from JG818 have been introduced into IMI-tolerant varieties. However, all three IMI-tolerant varieties carried clustered third type single nucleotide polymorphism (SNP) sites from unknown parents, indicating that these varieties were not directly derived from JG818, whereas those from different intermediate improved lines were crossed with JG818. Overall, we found that only OsALS1627N from JG818 has been broadly introduced into the Huanghuaihai region of China. Additionally, the 17 identified IMI-tolerant varieties provide alternative opportunities for improving such varieties along with other good traits.
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Affiliation(s)
- Peng Liu
- State Key Laboratory of Hybrid Rice, Hongshan Laboratory, College of Life Science, Wuhan University, Wuhan 430072, China; (P.L.); (T.W.); (H.Z.); (S.M.); (W.H.)
| | - Wenjie Feng
- Jining Academy of Agricultural Sciences, Jining 272031, China;
| | - Tao Wang
- State Key Laboratory of Hybrid Rice, Hongshan Laboratory, College of Life Science, Wuhan University, Wuhan 430072, China; (P.L.); (T.W.); (H.Z.); (S.M.); (W.H.)
| | - Huadong Zhang
- State Key Laboratory of Hybrid Rice, Hongshan Laboratory, College of Life Science, Wuhan University, Wuhan 430072, China; (P.L.); (T.W.); (H.Z.); (S.M.); (W.H.)
| | - Shuaige Mao
- State Key Laboratory of Hybrid Rice, Hongshan Laboratory, College of Life Science, Wuhan University, Wuhan 430072, China; (P.L.); (T.W.); (H.Z.); (S.M.); (W.H.)
| | - Hua Zhang
- Tancheng Jinghua Seed Co., Ltd., Linyi 276100, China;
| | - Wenchao Huang
- State Key Laboratory of Hybrid Rice, Hongshan Laboratory, College of Life Science, Wuhan University, Wuhan 430072, China; (P.L.); (T.W.); (H.Z.); (S.M.); (W.H.)
| | - Haifeng Liu
- College of Agronomy, Shandong Agricultural University, Taian 271018, China;
| | - Shangzong Feng
- Agro-Technical Popularization Centre of Linyi City, Linyi 276000, China
| | - Zhaohui Chu
- State Key Laboratory of Hybrid Rice, Hongshan Laboratory, College of Life Science, Wuhan University, Wuhan 430072, China; (P.L.); (T.W.); (H.Z.); (S.M.); (W.H.)
- College of Agronomy, Shandong Agricultural University, Taian 271018, China;
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7
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Sall AT, Kabbaj H, Menoum SOE, Cisse M, Geleta M, Ortiz R, Bassi FM. Durum wheat heat tolerance loci defined via a north-south gradient. THE PLANT GENOME 2024; 17:e20414. [PMID: 38059316 DOI: 10.1002/tpg2.20414] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Revised: 11/01/2023] [Accepted: 11/02/2023] [Indexed: 12/08/2023]
Abstract
The global production of durum wheat (Triticum durum Desf.) is hindered by a constant rise in the frequency of severe heat stress events. To identify heat-tolerant germplasm, three different germplasm panels ("discovery," "investigation," and "validation") were studied under a range of heat-stressed conditions. Grain yield (GY) and its components were recorded at each site and a heat stress susceptibility index was calculated, confirming that each 1°C temperature rise corresponds to a GY reduction in durum wheat of 4.6%-6.3%. A total of 2552 polymorphic single nucleotide polymorphisms (SNPs) defined the diversity of the first panel, while 5642 SNPs were polymorphic in the "investigation panel." The use of genome-wide association studies revealed that 36 quantitative trait loci were associated with the target traits in the discovery panel, of which five were confirmed in a "subset" tested imposing heat stress by plastic tunnels, and in the investigation panel. A study of allelic combinations confirmed that Q.icd.Heat.003-1A, Q.icd.Heat.007-1B, and Q.icd.Heat.016-3B are additive in nature and the positive alleles at all three loci resulted in a 16% higher GY under heat stress. The underlying SNPs were converted into kompetitive allele specific PCR markers and tested on the validation panel, confirming that each explained up to 9% of the phenotypic variation for GY under heat stress. These markers can now be used for breeding to improve resilience to climate change and increase productivity in heat-stressed areas.
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Affiliation(s)
- Amadou Tidiane Sall
- Centre de Recherches Agricoles, Institut Sénégalais de Recherches Agricoles (ISRA), Saint-Louis, Senegal
| | - Hafssa Kabbaj
- International Center for the Agricultural Research in the Dry Areas (ICARDA), Rabat, Morocco
| | - Sidi Ould Ely Menoum
- Centre National de Recherche Agronomique et de Développement Agricole (CNRADA), Kaédi, Mauritania
| | - Madiama Cisse
- Centre de Recherches Agricoles, Institut Sénégalais de Recherches Agricoles (ISRA), Saint-Louis, Senegal
| | - Mulatu Geleta
- Department of Plant Breeding, Swedish University of Agricultural Sciences (SLU), Lomma, Sweden
| | - Rodomiro Ortiz
- Department of Plant Breeding, Swedish University of Agricultural Sciences (SLU), Lomma, Sweden
| | - Filippo M Bassi
- International Center for the Agricultural Research in the Dry Areas (ICARDA), Rabat, Morocco
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8
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Morris PC, Reuveni M, Ortiz R. Editorial: Impact and mitigation of abiotic stress in cereals. FRONTIERS IN PLANT SCIENCE 2024; 15:1374631. [PMID: 38463571 PMCID: PMC10921564 DOI: 10.3389/fpls.2024.1374631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 01/30/2024] [Indexed: 03/12/2024]
Affiliation(s)
| | - Moshe Reuveni
- Institute of Plant Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, Israel
| | - Rodomiro Ortiz
- Department of Plant Breeding, Swedish University of Agricultural Sciences, Uppsala, Sweden
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Quattrone A, Lopez-Guerrero M, Yadav P, Meier MA, Russo SE, Weber KA. Interactions between root hairs and the soil microbial community affect the growth of maize seedlings. PLANT, CELL & ENVIRONMENT 2024; 47:611-628. [PMID: 37974552 DOI: 10.1111/pce.14755] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Revised: 09/01/2023] [Accepted: 10/18/2023] [Indexed: 11/19/2023]
Abstract
Root hairs are considered important for rhizosphere formation, which affects root system functioning. Through interactions with soil microorganisms mediated by root exudation, root hairs may affect the phenotypes and growth of young plants. We tested this hypothesis by integrating results from two experiments: (1) a factorial greenhouse seedling experiment with Zea mays B73-wt and its root-hairless mutant, B73-rth3, grown in live and autoclaved soil, quantifying 15 phenotypic traits, seven growth rates, and soil microbiomes and (2) a semi-hydroponic system quantifying root exudation of maize genotypes. Possibly as compensation for lacking root hairs, B73-rth3 seedlings allocated more biomass to roots and grew slower than B73-wt seedlings in live soil, whereas B73-wt seedlings grew slowest in autoclaved soil, suggesting root hairs can be costly and their benefits were realized with more complete soil microbial assemblages. There were substantial differences in root exudation between genotypes and in rhizosphere versus non-rhizosphere microbiomes. The microbial taxa enriched in the presence of root hairs generally enhanced growth compared to taxa enriched in their absence. Our findings suggest the root hairs' adaptive value extends to plant-microbe interactions mediated by root exudates, affecting plant phenotypes, and ultimately, growth.
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Affiliation(s)
- Amanda Quattrone
- Complex Biosystems Ph.D. program, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
| | | | - Pooja Yadav
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
| | - Michael A Meier
- Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Rancho Biosciences, San Diego, California, USA
| | - Sabrina E Russo
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Center for Plant Science Innovation, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
| | - Karrie A Weber
- School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Department of Earth and Atmospheric Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA
- Daugherty Water for Food Institute, University of Nebraska, Lincoln, Nebraska, USA
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10
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Caccialupi G, Milc J, Caradonia F, Nasar MF, Francia E. The Triticeae CBF Gene Cluster-To Frost Resistance and Beyond. Cells 2023; 12:2606. [PMID: 37998341 PMCID: PMC10670769 DOI: 10.3390/cells12222606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 11/07/2023] [Accepted: 11/09/2023] [Indexed: 11/25/2023] Open
Abstract
The pivotal role of CBF/DREB1 transcriptional factors in Triticeae crops involved in the abiotic stress response has been highlighted. The CBFs represent an important hub in the ICE-CBF-COR pathway, which is one of the most relevant mechanisms capable of activating the adaptive response to cold and drought in wheat, barley, and rye. Understanding the intricate mechanisms and regulation of the cluster of CBF genes harbored by the homoeologous chromosome group 5 entails significant potential for the genetic improvement of small grain cereals. Triticeae crops seem to share common mechanisms characterized, however, by some peculiar aspects of the response to stress, highlighting a combined landscape of single-nucleotide variants and copy number variation involving CBF members of subgroup IV. Moreover, while chromosome 5 ploidy appears to confer species-specific levels of resistance, an important involvement of the ICE factor might explain the greater tolerance of rye. By unraveling the genetic basis of abiotic stress tolerance, researchers can develop resilient varieties better equipped to withstand extreme environmental conditions. Hence, advancing our knowledge of CBFs and their interactions represents a promising avenue for improving crop resilience and food security.
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Affiliation(s)
- Giovanni Caccialupi
- Department of Life Sciences, University of Modena and Reggio Emilia, Via Amendola 2, 42122 Reggio Emilia, Italy; (J.M.); (F.C.); (M.F.N.); (E.F.)
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11
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Mohan N, Jhandai S, Bhadu S, Sharma L, Kaur T, Saharan V, Pal A. Acclimation response and management strategies to combat heat stress in wheat for sustainable agriculture: A state-of-the-art review. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 336:111834. [PMID: 37597666 DOI: 10.1016/j.plantsci.2023.111834] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 08/06/2023] [Accepted: 08/16/2023] [Indexed: 08/21/2023]
Abstract
Unpredicted variability in climate change on the planet is associated with frequent extreme high-temperature events impacting crop yield globally. Wheat is an economically and nutritionally important crop that fulfils global food requirements and each degree rise in temperature results in ∼6% of its yield reduction. Thus, understanding the impact of climate change, especially the terminal heat stress on global wheat production, becomes critically important for policymakers, crop breeders, researchers and scientists to ensure global food security. This review describes how wheat perceives heat stress and induces stress adaptation events by its morpho-physiological, phenological, molecular, and biochemical makeup. Temperature above a threshold level in crop vicinity leads to irreversible injuries, viz. destruction of cellular membranes and enzymes, generation of active oxygen species, redox imbalance, etc. To cope with these changes, wheat activates its heat tolerance mechanisms characterized by hoarding up soluble carbohydrates, signalling molecules, and heat tolerance gene expressions. Being vulnerable to heat stress, increasing wheat production without delay seeks strategies to mitigate the detrimental effects and provoke the methods for its sustainable development. Thus, to ensure the crop's resilience to stress and increasing food demand, this article circumscribes the integrated management approaches to enhance wheat's performance and adaptive capacity besides its alleviating risks of increasing temperature anticipated with climate change. Implementing these integrated strategies in the face of risks from rising temperatures will assist us in producing sustainable wheat with improved yield.
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Affiliation(s)
- Narender Mohan
- Department of Biochemistry, College of Basic Sciences and Humanities, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana 125004, India.
| | - Sonia Jhandai
- Department of Biochemistry, College of Basic Sciences and Humanities, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana 125004, India
| | - Surina Bhadu
- Department of Biochemistry, College of Basic Sciences and Humanities, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana 125004, India
| | - Lochan Sharma
- Department of Nematology, College of Agriculture, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana 125004, India
| | - Taranjeet Kaur
- Department of Biochemistry, College of Basic Sciences and Humanities, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana 125004, India
| | - Vinod Saharan
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan 313001, India
| | - Ajay Pal
- Department of Biochemistry, College of Basic Sciences and Humanities, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana 125004, India
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Mateen A, Singh G. Evaluating the potential of millets as blend components with soy protein isolate in a high moisture extrusion system for improved texture, structure, and colour properties of meat analogues. Food Res Int 2023; 173:113395. [PMID: 37803733 DOI: 10.1016/j.foodres.2023.113395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2023] [Revised: 08/19/2023] [Accepted: 08/22/2023] [Indexed: 10/08/2023]
Abstract
This study explored the use of millets flours as a secondary ingredient with soy protein isolate (SPI) to develop fibrous high moisture meat analogue (HMMA). Three millets (sorghum, pearl millet, and finger millet) with three incorporation levels (10%, 20%, and 30%) were extruded at 60%, 65%, and 70% moisture content. The results showed that millet type, incorporation level, and moisture content significantly influenced the system parameters and textural properties. Good visual texturization was achieved at addition of pearl millet up to 30% incorporation level and sorghum and finger millet up to 20% incorporation level. Furthermore, the textural properties of HMMA made from SPI-millet blends were compared against HMMA made from SPI-gluten blend and real chicken. The HMMA made from SPI-millet flour had lower hardness, chewiness, resilience, springiness, tensile strength, cutting strength than that for SPI and SPI-wheat gluten blend and were much closer to corresponding values for real chicken. The results also showed that each of the three millet types generated distinctly different fibre patterns (thick to thin fibres) and colour (whiter to darker) of HMMA. Thus, HMMA produced from SPI-millet flour blends can offer a wide textural, fibre pattern and colour space for different plant-based meat applications. Since millets do not have gluten, they also offer an opportunity to make gluten-free HMMA's.
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Affiliation(s)
- Abdul Mateen
- Centre for Ayurveda Biology and Holistic Nutrition, The University of Trans-Disciplinary Health Sciences and Technology, Bengaluru, India
| | - Gurmeet Singh
- Centre for Ayurveda Biology and Holistic Nutrition, The University of Trans-Disciplinary Health Sciences and Technology, Bengaluru, India.
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Onyeneke RU, Agyarko FF, Onyeneke CJ, Osuji EE, Ibeneme PA, Esfahani IJ. How Does Climate Change Affect Tomato and Okra Production? Evidence from Nigeria. PLANTS (BASEL, SWITZERLAND) 2023; 12:3477. [PMID: 37836217 PMCID: PMC10575383 DOI: 10.3390/plants12193477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Revised: 09/26/2023] [Accepted: 09/26/2023] [Indexed: 10/15/2023]
Abstract
This study examined the impacts of climate change on okra and tomato yields. Fertilizer consumption and credit to the crop sector were considered as covariates in the analysis. Time-series data, spanning a period of 40 years, were obtained from various sources. An autoregressive distributed lag model was applied to analyze short- and long-term impacts of climate change and agricultural inputs on okra and tomato yields. Not all variables were stationary at levels (order zero), but they were all significant at first difference, indicating the presence of cointegration. The Bound's test F-ratio was statistically significant and implied the presence of long- and short-term relationships among the variables studied. The mean temperatures had negative impacts on okra and tomato yields in both the short and long terms. Credit guaranteed to the crop sector had positive short- and long-term impacts on tomato yield; fertilizer consumption had a negative long-term impact on okra yield. Our study concludes that climate change, particularly rising temperature, impacts herbaceous fruit crop production in Nigeria. Therefore, we recommend that breeding and disseminating climate-smart tomato and okra varieties will help fruit crop farmers respond to rising temperatures.
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Affiliation(s)
- Robert Ugochukwu Onyeneke
- Department of Agriculture, Alex Ekwueme Federal University Ndufu-Alike, Ikwo 482131, Nigeria; (R.U.O.); (C.J.O.); (E.E.O.)
| | - Fred Fosu Agyarko
- Institute for Scientific and Technological Information (INSTI), Accra P.O. Box M 32, Ghana;
| | - Chinenye Judith Onyeneke
- Department of Agriculture, Alex Ekwueme Federal University Ndufu-Alike, Ikwo 482131, Nigeria; (R.U.O.); (C.J.O.); (E.E.O.)
| | - Emeka Emmanuel Osuji
- Department of Agriculture, Alex Ekwueme Federal University Ndufu-Alike, Ikwo 482131, Nigeria; (R.U.O.); (C.J.O.); (E.E.O.)
| | - Patience Afor Ibeneme
- Department of Geography, Alex Ekwueme Federal University Ndufu-Alike, Ikwo 482131, Nigeria;
| | - Iman Janghorban Esfahani
- Glopex Co., Ltd., R & D Center B2065, GeumGang Penterium IX Tower A2801, Dongtancheomdansaneop 1-ro 27, Hwaseong-si 18469, Gyeonggi-do, Republic of Korea
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Senbeta AF, Worku W. Ethiopia's wheat production pathways to self-sufficiency through land area expansion, irrigation advance, and yield gap closure. Heliyon 2023; 9:e20720. [PMID: 37860519 PMCID: PMC10582363 DOI: 10.1016/j.heliyon.2023.e20720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Revised: 09/29/2023] [Accepted: 10/04/2023] [Indexed: 10/21/2023] Open
Abstract
Ethiopia is the second largest wheat producer in Africa. Though wheat production has been increasing steadily in the past decades, the demand for the crop outstripped domestic supply and forced the country to cover about 30 % of the deficit through commercial imports and food aid. The utilization of wheat is rising at 9 % annually while the production is increasing at 7.8 %, showing a continued widening between consumption and production. With a growing demand due to bourgeoning population, increase in income, and preference toward wheat-based products, the country has a long journey to achieve wheat self-sufficiency and save the scarce foreign currency reserve spent on import. The government of Ethiopia is committed to self-sufficiency through initiatives such as wheat area expansion, irrigation development and yield gap closure. In this review, we explored wheat production trends and the roles of the recent government initiatives toward wheat self-sufficiency. The review indicated that wheat production and productivity have increased in Ethiopia, but the wheat self-sufficiency of the country has declined from 99 % in the 1960s to 70 % at present. The future land area expansion in traditionally wheat-producing areas is limited, and wheat land suitability and yield potential is likely to reduce under climate change. Thus, the options to transform the wheat sector while reducing greenhouse gas emissions is through yield gap closure through intensification on existing cropland and judicious temporal and spatial expansion of irrigated wheat areas. The yield gap closure requires higher and more efficient input supply and utilization, investments in modern technologies, as well as supportive agricultural policies. To improve the productivity of small landholder farmers and increase intensity of production through irrigation investment on irrigation structures and facilities is required. Finally, we recommend further studies on yield gap analysis, the role of government initiatives, and wheat land suitability under current and future climate change scenarios at the local level.
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Affiliation(s)
- Abate Feyissa Senbeta
- Biology Department, College of Natural and Computational Sciences, Hawassa University, P. O. Box, 05, Ethiopia
- School of Plant and Horticultural Sciences, College of Agriculture, Hawassa University, P. O. Box, 05, Ethiopia
| | - Walelign Worku
- School of Plant and Horticultural Sciences, College of Agriculture, Hawassa University, P. O. Box, 05, Ethiopia
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15
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Amjad MA. Moderating the role of social progress with greenhouse gases to determine the health vulnerability in developing countries. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:92123-92134. [PMID: 37480538 DOI: 10.1007/s11356-023-28867-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Accepted: 07/14/2023] [Indexed: 07/24/2023]
Abstract
Human activities have compelled massive environmental degradation, which causes climate vulnerability and that has emerged as a significant health issue. The present study assesses the role of social progress with greenhouse gases to determine the health vulnerability in 77 developing countries from 2011 to 2020. The empirical results are estimated by using the panel ARDL econometric approach. The study found that greenhouse gas emission proposes a U-shaped relationship to determine health vulnerability. In this study, social progress is used as the moderator variable, which shifts the turning point of the U-shaped curve. For this purpose, the interaction term of social progress with greenhouse gases shifts the turning point to the left side of the U-shaped curve and further flattens it. Furthermore, this study explores that urbanization, export openness, and government education expenditure negatively impact health vulnerability while industrialization increases health vulnerability. The study recommends that government should pay special attention to declining greenhouse gases and rising social progress to improve health vulnerability.Graphical abstact.
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Affiliation(s)
- Muhammad Asif Amjad
- Department of Economics and Quantitative Methods, Dr. Hasan Murad School of Management, University of Management and Technology, Lahore, Pakistan.
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16
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Karunarathne S, Walker E, Sharma D, Li C, Han Y. Genetic resources and precise gene editing for targeted improvement of barley abiotic stress tolerance. J Zhejiang Univ Sci B 2023; 24:1069-1092. [PMID: 38057266 PMCID: PMC10710907 DOI: 10.1631/jzus.b2200552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2022] [Accepted: 01/17/2023] [Indexed: 07/11/2023]
Abstract
Abiotic stresses, predominately drought, heat, salinity, cold, and waterlogging, adversely affect cereal crops. They limit barley production worldwide and cause huge economic losses. In barley, functional genes under various stresses have been identified over the years and genetic improvement to stress tolerance has taken a new turn with the introduction of modern gene-editing platforms. In particular, clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 (Cas9) is a robust and versatile tool for precise mutation creation and trait improvement. In this review, we highlight the stress-affected regions and the corresponding economic losses among the main barley producers. We collate about 150 key genes associated with stress tolerance and combine them into a single physical map for potential breeding practices. We also overview the applications of precise base editing, prime editing, and multiplexing technologies for targeted trait modification, and discuss current challenges including high-throughput mutant genotyping and genotype dependency in genetic transformation to promote commercial breeding. The listed genes counteract key stresses such as drought, salinity, and nutrient deficiency, and the potential application of the respective gene-editing technologies will provide insight into barley improvement for climate resilience.
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Affiliation(s)
- Sakura Karunarathne
- Western Crop Genetics Alliance, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, WA 6150, Australia
| | - Esther Walker
- Department of Primary Industries and Regional Development, South Perth, WA 6151, Australia
| | - Darshan Sharma
- Department of Primary Industries and Regional Development, South Perth, WA 6151, Australia
| | - Chengdao Li
- Western Crop Genetics Alliance, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, WA 6150, Australia.
- Department of Primary Industries and Regional Development, South Perth, WA 6151, Australia.
| | - Yong Han
- Western Crop Genetics Alliance, College of Science, Health, Engineering and Education, Murdoch University, Murdoch, WA 6150, Australia.
- Department of Primary Industries and Regional Development, South Perth, WA 6151, Australia.
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Usman M, Ali A, Bashir MK, Radulescu M, Mushtaq K, Wudil AH, Baig SA, Akram R. Do farmers' risk perception, adaptation strategies, and their determinants benefit towards climate change? Implications for agriculture sector of Punjab, Pakistan. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:79861-79882. [PMID: 37291341 PMCID: PMC10249942 DOI: 10.1007/s11356-023-27759-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2022] [Accepted: 05/15/2023] [Indexed: 06/10/2023]
Abstract
Due to global and regional climatic dynamics for a couple of decades, agricultural productivity, rural livelihood, and food security have been badly affected in Pakistan. This study was conducted in Punjab, Pakistan, to explore the farmers' understanding of the impacts of climate change, adaptation strategies, determinants, and benefits on agriculture using data from 1080 respondents. Perceived risks by the farmers in the rice-wheat cropping system and the cotton-wheat cropping system were weed infestation, seed rate augmented, low-quality seeds, infestation of crop diseases and pests, change of cropping pattern, increase of input use, decrease of cropping intensity and productivity, decreasing soil fertility, increasing irrigation frequency, and increase of harvesting time. To alleviate the adverse influences of climate change, the adaptation strategies used by farmers were management of crop and variety, soil and irrigation water, diversification of agriculture production systems and livelihood sources, management of fertilizer and farm operations time, spatial adaptation, access to risk reduction measures and financial assets, adoption of new technologies, institutional support, and indigenous knowledge. Moreover, the results of Binary Logistic Regression indicate that adaptation strategies are affected by different factors like age, education, household family size, off-farm income, remittances, credit access, information on climatic and natural hazards, information on weather forecasting, land acreage, the experience of growing crops and rearing of livestock, tenancy status, tube well ownership, livestock inventory, access to market information, agricultural extension services, and distance from agricultural input/output market. There is a significant difference between adapters and nonadapters. The risk management system may be created to protect crops against failures caused by extreme weather events. There is a need to develop crop varieties that are both high yielding and resistant to climate change. Moreover, cropping patterns should be revised to combat the effects of climate change. To enhance farmers' standard of living, it is necessary to provide adequate extension services and a more significant number of investment facilities. These measures will assist farmers in maintaining their standard of living and food security over the long term to adapt to the effects of climate change based on various cropping zones.
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Affiliation(s)
- Muhammad Usman
- Institute of Agricultural and Resource Economics, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Asghar Ali
- Institute of Agricultural and Resource Economics, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Muhammad Khalid Bashir
- Institute of Agricultural and Resource Economics, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Magdalena Radulescu
- Department of Finance, Accounting and Economics, University of Pitesti, Pitești, Romania
- Institute for Doctoral and Post-Doctoral Studies, University “Lucian Blaga, Bd. Victoriei, No. 10, 550024 Sibiu, Romania
| | - Khalid Mushtaq
- Institute of Agricultural and Resource Economics, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Abdulazeez Hudu Wudil
- Institute of Agricultural and Resource Economics, University of Agriculture Faisalabad, Faisalabad, Pakistan
| | - Sajjad Ahmad Baig
- Faisalabad Business School, National Textile University, Faisalabad, Pakistan
| | - Rimsha Akram
- Department of Botany, University of Agriculture Faisalabad, Faisalabad, Pakistan
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18
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DeFries R, Liang S, Chhatre A, Davis KF, Ghosh S, Rao ND, Singh D. Climate resilience of dry season cereals in India. Sci Rep 2023; 13:9960. [PMID: 37340018 DOI: 10.1038/s41598-023-37109-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 06/15/2023] [Indexed: 06/22/2023] Open
Abstract
India is the world's second largest producer of wheat, with more than 40% increase in production since 2000. Increasing temperatures raise concerns about wheat's sensitivity to heat. Traditionally-grown sorghum is an alternative rabi (winter season) cereal, but area under sorghum production has declined more than 20% since 2000. We examine sensitivity of wheat and sorghum yields to historical temperature and compare water requirements in districts where both cereals are cultivated. Wheat yields are sensitive to increases in maximum daily temperature in multiple stages of the growing season, while sorghum does not display the same sensitivity. Crop water requirements (mm) are 1.4 times greater for wheat than sorghum, mainly due to extension of its growing season into summer. However, water footprints (m3 per ton) are approximately 15% less for wheat due to its higher yields. Sensitivity to future climate projections, without changes in management, suggests 5% decline in wheat yields and 12% increase in water footprints by 2040, compared with 4% increase in water footprint for sorghum. On balance, sorghum provides a climate-resilient alternative to wheat for expansion in rabi cereals. However, yields need to increase to make sorghum competitive for farmer profits and efficient use of land to provide nutrients.
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Affiliation(s)
- Ruth DeFries
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, New York, 10027, USA.
- Climate School, Columbia University, New York, 10027, USA.
| | - Shefang Liang
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, New York, 10027, USA
- Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | | | - Kyle Frankel Davis
- Department of Geography and Spatial Sciences, University of Delaware, Newark, DE, 19716, USA
- Department of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA
| | - Subimal Ghosh
- Department of Civil Engineering, Indian Institute of Technology Bombay, Powai, MH, India
| | - Narasimha D Rao
- Yale School of the Environment, Yale University, New Haven, CT, 06520, USA
- International Institute for Applied Systems Analysis, Laxenburg, Austria
| | - Deepti Singh
- School of the Environment, Washington State University, Vancouver, WA, 98686, USA
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Out-of-phase relationship of Holocene moisture variations between the northeastern and southeastern Tibetan Plateau and its societal impacts. FUNDAMENTAL RESEARCH 2023. [DOI: 10.1016/j.fmre.2023.02.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023] Open
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20
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Sustek-Sánchez F, Rognli OA, Rostoks N, Sõmera M, Jaškūnė K, Kovi MR, Statkevičiūtė G, Sarmiento C. Improving abiotic stress tolerance of forage grasses - prospects of using genome editing. FRONTIERS IN PLANT SCIENCE 2023; 14:1127532. [PMID: 36824201 PMCID: PMC9941169 DOI: 10.3389/fpls.2023.1127532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Accepted: 01/24/2023] [Indexed: 06/18/2023]
Abstract
Due to an increase in the consumption of food, feed, and fuel and to meet global food security needs for the rapidly growing human population, there is a necessity to obtain high-yielding crops that can adapt to future climate changes. Currently, the main feed source used for ruminant livestock production is forage grasses. In temperate climate zones, perennial grasses grown for feed are widely distributed and tend to suffer under unfavorable environmental conditions. Genome editing has been shown to be an effective tool for the development of abiotic stress-resistant plants. The highly versatile CRISPR-Cas system enables increasingly complex modifications in genomes while maintaining precision and low off-target frequency mutations. In this review, we provide an overview of forage grass species that have been subjected to genome editing. We offer a perspective view on the generation of plants resilient to abiotic stresses. Due to the broad factors contributing to these stresses the review focuses on drought, salt, heat, and cold stresses. The application of new genomic techniques (e.g., CRISPR-Cas) allows addressing several challenges caused by climate change and abiotic stresses for developing forage grass cultivars with improved adaptation to the future climatic conditions. Genome editing will contribute towards developing safe and sustainable food systems.
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Affiliation(s)
- Ferenz Sustek-Sánchez
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
| | - Odd Arne Rognli
- Department of Plant Sciences, Faculty of Biosciences, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Nils Rostoks
- Department of Microbiology and Biotechnology, Faculty of Biology, University of Latvia, Riga, Latvia
| | - Merike Sõmera
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
| | - Kristina Jaškūnė
- Laboratory of Genetics and Physiology, Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Akademija, Lithuania
| | - Mallikarjuna Rao Kovi
- Department of Plant Sciences, Faculty of Biosciences, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Gražina Statkevičiūtė
- Laboratory of Genetics and Physiology, Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Akademija, Lithuania
| | - Cecilia Sarmiento
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
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Matuska-Łyżwa J, Wodecka B, Kaca W. Characterization of Steinernema feltiae (Rhabditida: Steinernematidae) Isolates in Terms of Efficacy against Cereal Ground Beetle Zabrus tenebrioides (Coleoptera: Carabidae): Morphometry and Principal Component Analysis. INSECTS 2023; 14:150. [PMID: 36835719 PMCID: PMC9965863 DOI: 10.3390/insects14020150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 01/26/2023] [Accepted: 01/29/2023] [Indexed: 06/18/2023]
Abstract
One of the most dangerous pests of cereals is Zabrus tenebrioides and, in Poland, it is becoming a serious pest. Entomopathogenic nematodes (EPNs) seem to be a very promising, biological control agent for this pest. Native EPN populations are well adapted to local environmental conditions. The current study characterized three Polish isolates of the EPN Steinernema feltiae, which differed in their effectiveness against Z. tenebrioides. In the field, isolate iso1Lon reduced the pest population by 37%, compared with 30% by isolate iso1Dan and 0% by the iso1Obl isolate; the number of plants damaged by Z. tenebrioides in the presence of the different isolates reflected the results in terms of the decrease in pest population size. After incubation in the soil for 60 days, recovered EPN juveniles of all three isolates were able to infect 93-100% of the test insects, with isolate iso1Obl again showing the lowest effectiveness. The juveniles of isolate iso1Obl were also morphometrically distinct from the other two isolates, as revealed by principal component analysis (PCA), which helped to distinguish the EPN isolates. These findings showed the value of using locally adapted isolates of EPNs; two of the three isolates randomly selected from Polish soil outperformed a commercial population of S. feltiae.
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Affiliation(s)
- Joanna Matuska-Łyżwa
- Department of Microbiology, Institute of Biology, Faculty of Natural Sciences, Jan Kochanowski University, 7 Uniwersytecka St, 25-406 Kielce, Poland
| | - Barbara Wodecka
- Faculty of Law and Social Sciences, Jan Kochanowski University, 15 Uniwersytecka St, 25-406 Kielce, Poland
| | - Wiesław Kaca
- Department of Microbiology, Institute of Biology, Faculty of Natural Sciences, Jan Kochanowski University, 7 Uniwersytecka St, 25-406 Kielce, Poland
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Fathian M, Bazrafshan O, Jamshidi S, Jafari L. Impacts of climate change on water footprint components of rainfed and irrigated wheat in a semi-arid environment. ENVIRONMENTAL MONITORING AND ASSESSMENT 2023; 195:324. [PMID: 36692693 DOI: 10.1007/s10661-023-10947-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2022] [Accepted: 01/16/2023] [Indexed: 06/17/2023]
Abstract
Climate change is one of the biggest environmental challenges that significantly impact water resources and the quantity and quality of agricultural products. Assessment of these impacts during the historical period and under future climate is essential for achieving a sustainable agricultural system in the face of climate change threats and water scarcity. In this research, we evaluated the yield and water footprint of rainfed and irrigated wheat during the historical period (1986-2015) and two future periods (2016 to 2055) in a semi-arid environment in Fars province, Iran. The future climate data was selected from the CanESM2 model outputs (bias-corrected and downscaled using the SDSM model) under the RCP4.5 scenario, and the yield projection was made using the AquaCrop model. Our result showed that for both irrigated and rainfed wheat, the yield significantly increases in southern parts of the study area in future climates, primarily because of an increase in effective precipitation. Other regions will experience a marginal yield decrease or no yield changes (in the case of irrigated wheat). Our assessments of the water footprint of wheat production showed a significant reduction in green and blue water footprints in the southern regions. In other regions, various patterns emerged for irrigated and rainfed wheat, but an overall increase was observed. The southern regions of the study area will be more suitable for wheat production owing to the higher yield and lower water footprint.
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Affiliation(s)
- Maryam Fathian
- Department of Natural Resources Engineering, Faculty of Agricultural and Natural Resources Engineering, University of Hormozgan, Bandar Abbas, Iran
| | - Ommolbanin Bazrafshan
- Department of Natural Resources Engineering, Faculty of Agricultural and Natural Resources Engineering, University of Hormozgan, Bandar Abbas, Iran.
| | - Sajad Jamshidi
- Department of Agronomy, Purdue University, Lafayette, IN, 47901, USA
| | - Leila Jafari
- Department of Horticulture Sciences, Faculty of Agricultural and Natural Resources Engineering, University of Hormozgan, Bandar Abbas, Iran
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Elbasyoni IS, Eltaher S, Morsy S, Mashaheet AM, Abdallah AM, Ali HG, Mariey SA, Baenziger PS, Frels K. Novel Single-Nucleotide Variants for Morpho-Physiological Traits Involved in Enhancing Drought Stress Tolerance in Barley. PLANTS (BASEL, SWITZERLAND) 2022; 11:3072. [PMID: 36432800 PMCID: PMC9696095 DOI: 10.3390/plants11223072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Revised: 09/14/2022] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
Barley (Hordeum vulgare L.) thrives in the arid and semi-arid regions of the world; nevertheless, it suffers large grain yield losses due to drought stress. A panel of 426 lines of barley was evaluated in Egypt under deficit (DI) and full irrigation (FI) during the 2019 and 2020 growing seasons. Observations were recorded on the number of days to flowering (NDF), total chlorophyll content (CH), canopy temperature (CAN), grain filling duration (GFD), plant height (PH), and grain yield (Yield) under DI and FI. The lines were genotyped using the 9K Infinium iSelect single nucleotide polymorphisms (SNP) genotyping platform, which resulted in 6913 high-quality SNPs. In conjunction with the SNP markers, the phenotypic data were subjected to a genome-wide association scan (GWAS) using Bayesian-information and Linkage-disequilibrium Iteratively Nested Keyway (BLINK). The GWAS results indicated that 36 SNPs were significantly associated with the studied traits under DI and FI. Furthermore, eight markers were significant and common across DI and FI water regimes, while 14 markers were uniquely associated with the studied traits under DI. Under DI and FI, three (11_10326, 11_20042, and 11_20170) and five (11_20099, 11_10326, 11_20840, 12_30298, and 11_20605) markers, respectively, had pleiotropic effect on at least two traits. Among the significant markers, 24 were annotated to known barley genes. Most of these genes were involved in plant responses to environmental stimuli such as drought. Overall, nine of the significant markers were previously reported, and 27 markers might be considered novel. Several markers identified in this study could enable the prediction of barley accessions with optimal agronomic performance under DI and FI.
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Affiliation(s)
- Ibrahim S. Elbasyoni
- Crop Science Department, Faculty of Agriculture, Damanhour University, Damanhour 22516, Egypt
- Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Shamseldeen Eltaher
- Department of Plant Biotechnology, Genetic Engineering and Biotechnology Research Institute (GEBRI), University of Sadat City (USC), Sadat City 32897, Egypt
| | - Sabah Morsy
- Crop Science Department, Faculty of Agriculture, Damanhour University, Damanhour 22516, Egypt
| | - Alsayed M. Mashaheet
- Plant Pathology Department, Faculty of Agriculture, Damanhour University, Damanhour 22516, Egypt
| | - Ahmed M. Abdallah
- Natural Resources and Agricultural Engineering Department, Faculty of Agriculture, Damanhour University, Damanhour 22516, Egypt
| | - Heba G. Ali
- Barley Research Department, Field Crops Research Institute, Agricultural Research Center, 9 Gamma Street-Giza, Cairo 12619, Egypt
| | - Samah A. Mariey
- Barley Research Department, Field Crops Research Institute, Agricultural Research Center, 9 Gamma Street-Giza, Cairo 12619, Egypt
| | - P. Stephen Baenziger
- Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Katherine Frels
- Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
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Wu X, Wang Y, Bian Y, Ren Y, Xu X, Zhou F, Ding H. A critical review on plant annexin: Structure, function, and mechanism. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 190:81-89. [PMID: 36108355 DOI: 10.1016/j.plaphy.2022.08.019] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 08/21/2022] [Accepted: 08/22/2022] [Indexed: 06/15/2023]
Abstract
Plant annexins are evolutionary conserved protein family widely exist in almost all plant species, characterized by a shorter N-terminal region and four conservative annexin repeats. Plant annexins have Ca2+ channel-regulating activity and peroxidase as well as ATPase/GTPase activities, which give annexins functional specificity. They are widely involved in regulating diverse aspects of biochemical and cellular processes, plant growth and development, and responses to biotic and abiotic environmental stresses. Though many studies have reviewed the function of annexins, great progress have been made in the study of plant annexins recently. In this review, we outline the current understanding of basic properties of plant annexins and summarize the emerging advances in understanding the functional roles of annexins in plants and highlight the regulation mechanisms of annexin protein in response to stress especially to salt and cold stress. The interesting questions related to plant annexin that remain to be further elucidated are also discussed.
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Affiliation(s)
- Xiaoxia Wu
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China/College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China
| | - Yan Wang
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China/College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China
| | - Yuhao Bian
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China/College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China
| | - Yan Ren
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China/College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China
| | - Xiaoying Xu
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China/College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China
| | - Fucai Zhou
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
| | - Haidong Ding
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of Ministry of Education of China/College of Bioscience and Biotechnology, Yangzhou University, Yangzhou, 225009, China.
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25
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Pickson RB, Gui P, Chen A, Boateng E. Empirical analysis of rice and maize production under climate change in China. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:70242-70261. [PMID: 35585461 DOI: 10.1007/s11356-022-20722-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2022] [Accepted: 05/05/2022] [Indexed: 05/25/2023]
Abstract
The past few decades of extreme drought and flooding caused by changing climate conditions have significantly affected agricultural production globally. This study focuses on two vital crops in China-maize and rice-and provides a comprehensive analysis of how these crops are affected by climate change-induced factors over the periods 1978Q1-2015Q4. Four key findings were obtained. First, using a nonparametric approach to estimate actual and observed trends of climatic variables, the results show a significant positive trend in average temperature from February to October. On the other hand, seasonal temperature increases during spring, summer, and autumn. Second, the results show no significant change in the monthly, seasonal, and annual rainfall patterns when examined over the study period. Third, using an autoregressive distributed lag (ARDL) model, we find that while temperature and rainfall do not significantly support rice production in the long and short run, they play a substantial role in maize production in China. Finally, we find no significant difference in the results for rice when the quantile regression (QR) technique that controls for distributional asymmetry effects is employed. However, the impact of temperature on maize decreases at higher quantiles. Given the outcomes of our study, we argue that an advanced irrigation system is crucial and must be encouraged to minimize the effects of climate change on crop production.
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Affiliation(s)
| | - Peng Gui
- Gongqing Institute of Science and Technology, Jiujiang, China
| | - Ai Chen
- Nanchang University, Nanchang, China
| | - Elliot Boateng
- Department of Economics, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana
- Centre for African Research, Engagement and Partnerships (CARE-P), University of Newcastle, Newcastle, Australia
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26
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Sossa CLG, Sanogo S, Naab JB, Sintondji LO. Trends and research features on greenhouse gas emissions from rice production: review based on bibliometric analysis. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:73828-73841. [PMID: 36103066 DOI: 10.1007/s11356-022-22921-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Accepted: 09/03/2022] [Indexed: 06/15/2023]
Abstract
Greenhouse gas from rice production has become a great concern and the focus of a lot of research in recent years. The main aim of the study was to explore the research trend of GHG emissions from rice production by exploring the research hotspots and providing suggestions for future research directions over the period 1991 to 2020. A bibliometric analysis was conducted using the Scopus database, and the sample included 2535 articles. The methodology was based on descriptive analysis, co-occurrence analysis, factorial analysis, word dynamic over time, and the author's keyword analysis over time. The results indicate a remarkable increase in the number of articles published on this topic, mainly in the journals of "Agriculture," "Ecosystems," and "Environment." The main authors were Conrad R. and Wassmann R. Relating to the number of published articles, very few were contributed by African countries, whereas China, Japan, and India were the main contributors. The co-occurrence analysis showed that rice, methane, and nitrous oxide are the core keywords of the network. The multiple factorial analysis pointed out that greenhouse gas emissions from rice production depend on the farming practices, the environmental factors, and the plant growth as well. The evolutionary path showed that the current author's keywords are more related to global warming potential, climate change, and biochar. The findings of this review can help researchers and scholars by providing a better overview of development trends that have emerged over the past 30 years and suggestions for the future direction in this field.
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Affiliation(s)
- Coffi Leonce Geoffroy Sossa
- West African Science Service Centre on Climate Change and Adapted Land Use (WASCAL) - Graduate Research Program on Climate Change and Agriculture, Université des Sciences, des Techniques et des Technologies de Bamako (USTTB), BP E 423, Bamako, Mali.
- Laboratoire d'Hydraulique et de Maîtrise de l'Eau (LHME), Institut National de l'Eau (INE/UAC), Université d'Abomey-Calavi, 01 BP 526, Abomey-Calavi, Benin.
| | - Souleymane Sanogo
- Faculté des Sciences et Techniques (FST), Université des Sciences, des Techniques et des Technologies de Bamako (USTTB), BP E 423, Bamako, Mali
| | - Jesse B Naab
- West African Science Service Centre on Climate Change and Adapted Land Use (WASCAL), Competence Center, 06 BP 9507 06, Ouagadougou, Burkina Faso
| | - Luc O Sintondji
- Laboratoire d'Hydraulique et de Maîtrise de l'Eau (LHME), Institut National de l'Eau (INE/UAC), Université d'Abomey-Calavi, 01 BP 526, Abomey-Calavi, Benin
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27
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Ntiamoah EB, Li D, Appiah-Otoo I, Twumasi MA, Yeboah EN. Towards a sustainable food production: modelling the impacts of climate change on maize and soybean production in Ghana. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:72777-72796. [PMID: 35610457 PMCID: PMC9130696 DOI: 10.1007/s11356-022-20962-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Accepted: 05/16/2022] [Indexed: 05/17/2023]
Abstract
The Ghanaian economy relies heavily on maize and soybean production. The entire maize and soybean production system is low-tech, making it extremely susceptible to environmental factors. As a result, climate change and variability have an influence on agricultural production, such as maize and soybean yields. Therefore, the study's ultimate purpose was to analyze the influence of CO2 emissions, precipitation, domestic credit, and fertilizer consumption on maize and soybean productivity in Ghana by utilizing the newly constructed dynamic simulated autoregressive distributed lag (ARDL) model for the period 1990 to 2020. The findings indicated that climate change enhances maize and soybean yields in Ghana in both the short run and long run. Also, the results from the frequency domain causality showed that climate change causes maize and soybean yield in the long-run. These outcomes were robust to the use of the ordinary least squares estimator and the impulse response technique. The findings show that crop and water management strategies, as well as information availability, should be considered in food production to improve resistance to climate change and adverse climatic circumstances.
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Affiliation(s)
| | - Dongmei Li
- College of Management, Sichuan Agricultural University, Chengdu, 611130, China
| | - Isaac Appiah-Otoo
- School of Management and Economics, University of Electronic Science and Technology of China, Chengdu, China
| | | | - Edmond Nyamah Yeboah
- Department of Marketing and Supply Chain Management, University of Cape Coast, Cape Coast, Ghana
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28
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Corn (Zea mays L.) and sorghum (Sorghum bicolor (L.) Moench) yield and nutritional quality affected by drought stress. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2022.102486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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29
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Transcriptional Comparison of Genes Associated with Photosynthesis, Photorespiration, and Photo-Assimilate Allocation and Metabolic Profiling of Rice Species. Int J Mol Sci 2022; 23:ijms23168901. [PMID: 36012167 PMCID: PMC9408291 DOI: 10.3390/ijms23168901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 07/29/2022] [Accepted: 07/30/2022] [Indexed: 11/17/2022] Open
Abstract
The ever-increasing human population alongside environmental deterioration has presented a pressing demand for increased food production per unit area. As a consequence, considerable research effort is currently being expended in assessing approaches to enhance crop yields. One such approach is to harness the allelic variation lost in domestication. This is of particular importance since crop wild relatives often exhibit better tolerance to abiotic stresses. Here, we wanted to address the question as to why wild rice species have decreased grain production despite being characterized by enhanced rates of photosynthesis. In order to do so, we selected ten rice species on the basis of the presence of genome information, life span, the prominence of distribution, and habitat type and evaluated the expression of genes in photosynthesis, photorespiration, sucrose and starch synthesis, sucrose transport, and primary and secondary cell walls. We additionally measured the levels of a range of primary metabolites via gas chromatography–mass spectrometry. The results revealed that the wild rice species exhibited not only higher photosynthesis but also superior CO2 recovery by photorespiration; showed greater production of photosynthates such as soluble sugars and starch and quick transportation to the sink organs with a possibility of transporting forms such as RFOs, revealing the preferential consumption of soluble sugars to develop both primary and secondary cell walls; and, finally, displayed high glutamine/glutamic acid ratios, indicating that they likely exhibited high N-use efficiency. The findings from the current study thus identify directions for future rice improvement through breeding.
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30
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Rai KK. Integrating speed breeding with artificial intelligence for developing climate-smart crops. Mol Biol Rep 2022; 49:11385-11402. [PMID: 35941420 PMCID: PMC9360691 DOI: 10.1007/s11033-022-07769-4] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Accepted: 07/05/2022] [Indexed: 11/25/2022]
Abstract
INTRODUCTION In climate change, breeding crop plants with improved productivity, sustainability, and adaptability has become a daunting challenge to ensure global food security for the ever-growing global population. Correspondingly, climate-smart crops are also the need to regulate biomass production, which is imperative for the maintenance of ecosystem services worldwide. Since conventional breeding technologies for crop improvement are limited, time-consuming, and involve laborious selection processes to foster new and improved crop varieties. An urgent need is to accelerate the plant breeding cycle using artificial intelligence (AI) to depict plant responses to environmental perturbations in real-time. MATERIALS AND METHODS The review is a collection of authorized information from various sources such as journals, books, book chapters, technical bulletins, conference papers, and verified online contents. CONCLUSIONS Speed breeding has emerged as an essential strategy for accelerating the breeding cycles of crop plants by growing them under artificial light and temperature conditions. Furthermore, speed breeding can also integrate marker-assisted selection and cutting-edged gene-editing tools for early selection and manipulation of essential crops with superior agronomic traits. Scientists have recently applied next-generation AI to delve deeper into the complex biological and molecular mechanisms that govern plant functions under environmental cues. In addition, AIs can integrate, assimilate, and analyze complex OMICS data sets, an essential prerequisite for successful speed breeding protocol implementation to breed crop plants with superior yield and adaptability.
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Affiliation(s)
- Krishna Kumar Rai
- Centre of Advanced Study in Botany, Department of Botany, Institute of Science, Banaras Hindu University (BHU), 221005, Varanasi, Uttar Pradesh, India.
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31
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Kumar S, Jacob SR, Mir RR, Vikas VK, Kulwal P, Chandra T, Kaur S, Kumar U, Kumar S, Sharma S, Singh R, Prasad S, Singh AM, Singh AK, Kumari J, Saharan MS, Bhardwaj SC, Prasad M, Kalia S, Singh K. Indian Wheat Genomics Initiative for Harnessing the Potential of Wheat Germplasm Resources for Breeding Disease-Resistant, Nutrient-Dense, and Climate-Resilient Cultivars. Front Genet 2022; 13:834366. [PMID: 35846116 PMCID: PMC9277310 DOI: 10.3389/fgene.2022.834366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 05/09/2022] [Indexed: 11/13/2022] Open
Abstract
Wheat is one of the major staple cereal food crops in India. However, most of the wheat-growing areas experience several biotic and abiotic stresses, resulting in poor quality grains and reduced yield. To ensure food security for the growing population in India, there is a compelling need to explore the untapped genetic diversity available in gene banks for the development of stress-resistant/tolerant cultivars. The improvement of any crop lies in exploring and harnessing the genetic diversity available in its genetic resources in the form of cultivated varieties, landraces, wild relatives, and related genera. A huge collection of wheat genetic resources is conserved in various gene banks across the globe. Molecular and phenotypic characterization followed by documentation of conserved genetic resources is a prerequisite for germplasm utilization in crop improvement. The National Genebank of India has an extensive and diverse collection of wheat germplasm, comprising Indian wheat landraces, primitive cultivars, breeding lines, and collection from other countries. The conserved germplasm can contribute immensely to the development of wheat cultivars with high levels of biotic and abiotic stress tolerance. Breeding wheat varieties that can give high yields under different stress environments has not made much headway due to high genotypes and environmental interaction, non-availability of truly resistant/tolerant germplasm, and non-availability of reliable markers linked with the QTL having a significant impact on resistance/tolerance. The development of new breeding technologies like genomic selection (GS), which takes into account the G × E interaction, will facilitate crop improvement through enhanced climate resilience, by combining biotic and abiotic stress resistance/tolerance and maximizing yield potential. In this review article, we have summarized different constraints being faced by Indian wheat-breeding programs, challenges in addressing biotic and abiotic stresses, and improving quality and nutrition. Efforts have been made to highlight the wealth of Indian wheat genetic resources available in our National Genebank and their evaluation for the identification of trait-specific germplasm. Promising genotypes to develop varieties of important targeted traits and the development of different genomics resources have also been highlighted.
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Affiliation(s)
- Sundeep Kumar
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
- *Correspondence: Sundeep Kumar,
| | - Sherry R. Jacob
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
| | - Reyazul Rouf Mir
- Division of Genetics and Plant Breeding, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir (SKUAST-Kashmir), Jammu and Kashmir, India
| | - V. K. Vikas
- ICAR-Indian Agricultural Research Institute, New Delhi, India
| | - Pawan Kulwal
- State Level Biotechnology Centre, Mahatma Phule Krishi Vidyapeeth, Rahuri, India
| | - Tilak Chandra
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
| | - Satinder Kaur
- School of Agricultural Biotechnology, Punjab Agricultural University, Ludhiana, India
| | - Uttam Kumar
- Borlaug Institute for South Asia, Ludhiana, India
| | - Suneel Kumar
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
| | - Shailendra Sharma
- Department of Genetics and Plant Breeding, Chaudhary Charan Singh University, Meerut, Uttar Pradesh
| | - Ravinder Singh
- School of Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu (SKUAST-Jammu), Jammu and Kashmir, India
| | - Sai Prasad
- Indian Agriculture Research Institute Regional Research Station, Indore, India
| | - Anju Mahendru Singh
- Division of Genetics, Indian Agricultural Research Institute, New Delhi, India
| | - Amit Kumar Singh
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
| | - Jyoti Kumari
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
| | - M. S. Saharan
- Division of Plant Pathology, Indian Agricultural Research Institute, New Delhi, India
| | | | - Manoj Prasad
- Laboratory of Plant Virology, National Institute of Plant Genome Research, New Delhi, India
| | - Sanjay Kalia
- Department of Biotechnology, Ministry of Science and Technology, New Delhi, India
| | - Kuldeep Singh
- Indian Council of Agricultural Research-National Bureau of Plant Genetic Resources, New Delhi, India
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Zhao Q, Yu P, Mahendran R, Huang W, Gao Y, Yang Z, Ye T, Wen B, Wu Y, Li S, Guo Y. Global climate change and human health: Pathways and possible solutions. ECO-ENVIRONMENT & HEALTH (ONLINE) 2022; 1:53-62. [PMID: 38075529 PMCID: PMC10702927 DOI: 10.1016/j.eehl.2022.04.004] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 04/13/2022] [Accepted: 04/28/2022] [Indexed: 12/13/2023]
Abstract
Global warming has been changing the planet's climate pattern, leading to increasing frequency, intensity and duration of extreme weather events and natural disasters. These climate-changing events affect various health outcomes adversely through complicated pathways. This paper reviews the main signs of climate change so far, e.g., suboptimal ambient temperature, sea-level rise and other conditions, and depicts the interactive pathways between different climate-changing events such as suboptimal temperature, wildfires, and floods with a broad range of health outcomes. Meanwhile, the modifying effect of socioeconomic, demographic and environmental factors on the pathways is summarised, such that the youth, elderly, females, poor and those living in coastal regions are particularly susceptible to climate change. Although Earth as a whole is expected to suffer from climate change, this review article discusses some potential benefits for certain regions, e.g., a more liveable environment and sufficient food supply. Finally, we summarise certain mitigation and adaptation strategies against climate change and how these strategies may benefit human health in other ways. This review article provides a comprehensive and concise introduction of the pathways between climate change and human health and possible solutions, which may map directions for future research.
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Affiliation(s)
- Qi Zhao
- Department of Epidemiology, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Pei Yu
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Rahini Mahendran
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Wenzhong Huang
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Yuan Gao
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Zhengyu Yang
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Tingting Ye
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Bo Wen
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Yao Wu
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Shanshan Li
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
| | - Yuming Guo
- Department of Epidemiology and Preventive Medicine, School of Public Health and Preventive Medicine, Monash University, Melbourne, 3004, Australia
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Khanthavong P, Yabuta S, Malik AI, Hossain MA, Akagi I, Sakagami JI. Combinational Variation Temperature and Soil Water Response of Stomata and Biomass Production in Maize, Millet, Sorghum and Rice. PLANTS 2022; 11:plants11081039. [PMID: 35448767 PMCID: PMC9031973 DOI: 10.3390/plants11081039] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 04/07/2022] [Accepted: 04/08/2022] [Indexed: 11/16/2022]
Abstract
Environmental responses of stomatal conductance (gs) as basic information for a photosynthesis-transpiration-coupled model have been increasing under global warming. This study identified the impact of gs behavior under different soil water statuses and temperatures in rice, maize, millet, and sorghum. The experiments consisted of various soil moisture statuses from flooding to drying and combination of soil moisture status and temperature. There was a reduction in shoot biomass of maize and sorghum caused by decreasing of gs, photosynthesis (A), and transpiration (E) in early imposed waterlogging without dependent temperature, whereas millet and rice were dependent on temperature variation. The effect of gradual soil drying, gs, A, and E of maize, millet, and sorghum were caused by low temperature, except rice. The impact of the combination of various soil water statuses and temperatures on gs is important for the trade-off between A and E, and consequently shoot biomass. However, we discovered that an ability to sustain gs is essential for photo assimilation and maintaining leaf temperature through evapotranspiration for biomass production, a mechanism of crop avoidance in variable soil water status and temperature.
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Affiliation(s)
- Phanthasin Khanthavong
- The United Graduate School of Agricultural Sciences, Kagoshima University, Kagoshima 890-0056, Japan; (P.K.); (M.A.H.)
- National Agriculture and Forestry Research Institute, Dong Dok, Ban Nongviengkham, Vientiane 7170, Laos
| | - Shin Yabuta
- Faculty of Agriculture, Kagoshima University, Kagoshima 890-0056, Japan; (S.Y.); (I.A.)
| | - Al Imran Malik
- Alliance of Bioversity International and CIAT (Asia), Lao PDR Office, Dong Dok, Ban Nongviengkham, Vientiane 7170, Laos;
| | - Md Amzad Hossain
- The United Graduate School of Agricultural Sciences, Kagoshima University, Kagoshima 890-0056, Japan; (P.K.); (M.A.H.)
- Faculty of Agriculture, University of the Ryukyu, Okinawa 903-0213, Japan
| | - Isao Akagi
- Faculty of Agriculture, Kagoshima University, Kagoshima 890-0056, Japan; (S.Y.); (I.A.)
| | - Jun-Ichi Sakagami
- The United Graduate School of Agricultural Sciences, Kagoshima University, Kagoshima 890-0056, Japan; (P.K.); (M.A.H.)
- Faculty of Agriculture, Kagoshima University, Kagoshima 890-0056, Japan; (S.Y.); (I.A.)
- Correspondence: ; Tel.: +81-099-285-8543
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34
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Gul A, Chandio AA, Siyal SA, Rehman A, Xiumin W. How climate change is impacting the major yield crops of Pakistan? an exploration from long- and short-run estimation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:26660-26674. [PMID: 34855170 DOI: 10.1007/s11356-021-17579-z] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Accepted: 11/12/2021] [Indexed: 05/13/2023]
Abstract
This research attempts to evaluate the linkage among climatic change factors such as average temperature and rainfall patterns and non-climatic factors such as the area under major yield crops, fertilizer consumption, and formal credit on major food crop yield from 1985 to 2016 in Pakistan. For the first step, we checked the stationarity of the series by utilizing the unit root tests. An autoregressive distributed lag (ARDL) model was employed to identify the linkages between variables after verifying the properties over a specific period of time. The consequences of this study confirmed the long-run association between climatic and non-climatic factors to the major food crop yield in Pakistan. Furthermore, the outcomes of the study revealed that temperature has a diverse impact on major food crop yields. Whereas, the area under major food crops, average rainfall, fertilizer consumption, and formal credit have a positive impact on major food crop yield in Pakistan. For the second step, we used the Granger causality test to verify the causal linkage for the variables. The outcomes reveal a significant effect of climatic and non-climatic factors on major food crop yield. The bidirectional causality causal associations are found to be significant among variables including average temperature, fertilizer consumption, and formal credit disbursement. The empirical results further indicated that major food crop yields are more affected by climatic factors such as average temperature as compared to non-climatic factors. Based on the study findings, few recommendations are made to cope with factors of climate change. Invent such agricultural-specific adaptation policies for farmers which possess the ability and resilience to tackle climate change. Research and development in agriculture should focus on major varieties of food crops that can endure high temperatures. The agriculture industry will be able to sustain long-term production and distribution efficiency attributable to these strategies.
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Affiliation(s)
- Amber Gul
- College of Management, Sichuan Agricultural University, Chengdu, 611130, China.
| | - Abbas Ali Chandio
- College of Economics, Sichuan Agricultural University, Chengdu, 611130, China
| | - Sajid Ali Siyal
- College of Economics and Management, Nanjing Agricultural University, No.1 Weigang, Nanjing, 210095, People's Republic of China
| | - Abdul Rehman
- College of Economics and Management, Henan Agricultural University, Zhengzhou, 450002, China
| | - Wu Xiumin
- College of Management, Sichuan Agricultural University, 611130, Chengdu, China.
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Understanding Socio-Economic and Environmental Impacts of Agroforestry on Rural Communities. FORESTS 2022. [DOI: 10.3390/f13040556] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Several studies have highlighted the benefit of implementing agroforestry for rural communities. From the perspective of socio-economic, agroforestry can potentially improve smallholders’ income, increase food security, promote gender equality and stimulate cultural activities in rural areas. Furthermore, agroforestry can enhance ecosystem service through improved soil structure, increased carbon sequestration and higher water retention. Despite having many advantages, the adoption of agroforestry among rural communities, particularly among smallholder farmers in developing countries remains limited. The absence of agroforestry in public policy causes little recognition of this system to tackle the climate crisis as well as to improve rural livelihood. This may be due to, among others, a less comprehensive evidence on impacts that simultaneously touch upon social, economic as well as environmental aspects of agroforestry on the community. This review gives a special emphasis on the current evidence depicting the characteristics of agroforestry adoption, its benefits and potential drawbacks, as well as challenges for the adoption in some developing countries. The outcomes might help related stakeholders to make appropriate decisions to improve rural livelihood.
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Zhao F, Lei J, Wang R, Zhang Q, Qi Y, Zhang K, Guo Q, Wang H. Environmental determination of spring wheat yield in a climatic transition zone under global warming. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2022; 66:481-491. [PMID: 35064318 DOI: 10.1007/s00484-021-02196-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2021] [Revised: 07/17/2021] [Accepted: 09/21/2021] [Indexed: 06/14/2023]
Abstract
Understanding environmental determination of crop yield plays a critical role in agricultural. management in resource-limited areas. The climatic transition zone was a naturally ideal place to study. the relations between environmental factors and crop yield, due to its large annual variability of climatic factors and high speed of temperature increase under global warming. Our objectives were to identify the most critical environmental factor in determining spring wheat yield and analyze the convergence and divergence of water-yield relations for spring wheat in a typical climatic transition zone (semi-arid area). The study was conducted at two locations, Dingxi and Pengyang in Northwest China, with a long-term experiment (1987-2018) and two short-term irrigation experiments. Meanwhile, data of water use and spring wheat yield was collected from a series of previously published literature in the study area. The highest spring wheat yield was obtained under year pattern with higher soil water content at sowing (SWCS) and lower atmospheric dryness condition (ADC, the difference between reference evapotranspiration and precipitation during spring wheat growing season). SWCS was more important than precipitation during the growing season (PGS) in determining spring wheat yield in the study area. The relations between available water supply, water use, and spring wheat yield were convergence. However, SWCS had an impact on the relationship between yield and PGS and SWCS-yield relation was affected by ADC. We concluded that precipitation in 7 months before sowing was the dominant factor determining spring wheat yield in the climatic transition zone under global warming whereas the impact of high atmospheric evaporative demand resulted from the increasing temperature on crop yields and SWCS-yield relation must be taken into account for the analysis of environmental determination of spring wheat yield.
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Affiliation(s)
- Funian Zhao
- Key Laboratory of Arid Climatic Change and Disaster Reduction of Gansu Province, Key Laboratory of Arid Climate Change and Disaster Reduction of CMA, Lanzhou, Institute of Arid Meteorology, China Meteorological Administration, Lanzhou, 730020, China
| | - Jun Lei
- Dingxi Meteorological Bureau, Dingxi, 743000, China
| | - Runyuan Wang
- Key Laboratory of Arid Climatic Change and Disaster Reduction of Gansu Province, Key Laboratory of Arid Climate Change and Disaster Reduction of CMA, Lanzhou, Institute of Arid Meteorology, China Meteorological Administration, Lanzhou, 730020, China
| | - Qiang Zhang
- Key Laboratory of Arid Climatic Change and Disaster Reduction of Gansu Province, Key Laboratory of Arid Climate Change and Disaster Reduction of CMA, Lanzhou, Institute of Arid Meteorology, China Meteorological Administration, Lanzhou, 730020, China
| | - Yue Qi
- Key Laboratory of Arid Climatic Change and Disaster Reduction of Gansu Province, Key Laboratory of Arid Climate Change and Disaster Reduction of CMA, Lanzhou, Institute of Arid Meteorology, China Meteorological Administration, Lanzhou, 730020, China
| | - Kai Zhang
- Key Laboratory of Arid Climatic Change and Disaster Reduction of Gansu Province, Key Laboratory of Arid Climate Change and Disaster Reduction of CMA, Lanzhou, Institute of Arid Meteorology, China Meteorological Administration, Lanzhou, 730020, China
| | - Qu Guo
- Chongqing Climate Center, Chongqing Meteorological Administration, Chongqing, 401147, China.
| | - Heling Wang
- Key Laboratory of Arid Climatic Change and Disaster Reduction of Gansu Province, Key Laboratory of Arid Climate Change and Disaster Reduction of CMA, Lanzhou, Institute of Arid Meteorology, China Meteorological Administration, Lanzhou, 730020, China
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How to Cope with the Challenges of Environmental Stresses in the Era of Global Climate Change: An Update on ROS Stave off in Plants. Int J Mol Sci 2022; 23:ijms23041995. [PMID: 35216108 PMCID: PMC8879091 DOI: 10.3390/ijms23041995] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 01/30/2022] [Accepted: 02/06/2022] [Indexed: 02/06/2023] Open
Abstract
With the advent of human civilization and anthropogenic activities in the shade of urbanization and global climate change, plants are exposed to a complex set of abiotic stresses. These stresses affect plants’ growth, development, and yield and cause enormous crop losses worldwide. In this alarming scenario of global climate conditions, plants respond to such stresses through a highly balanced and finely tuned interaction between signaling molecules. The abiotic stresses initiate the quick release of reactive oxygen species (ROS) as toxic by-products of altered aerobic metabolism during different stress conditions at the cellular level. ROS includes both free oxygen radicals {superoxide (O2•−) and hydroxyl (OH−)} as well as non-radicals [hydrogen peroxide (H2O2) and singlet oxygen (1O2)]. ROS can be generated and scavenged in different cell organelles and cytoplasm depending on the type of stimulus. At high concentrations, ROS cause lipid peroxidation, DNA damage, protein oxidation, and necrosis, but at low to moderate concentrations, they play a crucial role as secondary messengers in intracellular signaling cascades. Because of their concentration-dependent dual role, a huge number of molecules tightly control the level of ROS in cells. The plants have evolved antioxidants and scavenging machinery equipped with different enzymes to maintain the equilibrium between the production and detoxification of ROS generated during stress. In this present article, we have focused on current insights on generation and scavenging of ROS during abiotic stresses. Moreover, the article will act as a knowledge base for new and pivotal studies on ROS generation and scavenging.
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Chandio AA, Jiang Y, Amin A, Akram W, Ozturk I, Sinha A, Ahmad F. Modeling the impact of climatic and non-climatic factors on cereal production: evidence from Indian agricultural sector. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:14634-14653. [PMID: 34617217 DOI: 10.1007/s11356-021-16751-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
The underpinned study examines the effects of climatic and non-climatic factors on Indian agriculture, cereal production, and yield using the country-level time series data of 1965-2015. With the autoregressive distributed lag (ARDL) bounds testing approach, the long-term equilibrium association among the variables has been explored. The results reveal that climatic factors like CO2 emissions and temperature adversely affect agricultural output, while rainfall positively affects it. Likewise, non-climatic factors, including energy used, financial development, and labor force, affect agricultural production positively in the long run. The estimated long-run results further demonstrate that CO2 emissions and rainfall positively affect both cereal production and yield, while temperature adversely affects them. The results exhibit that the cereal cropped area, energy used, financial development, and labor force significantly and positively impact the long-run cereal production and yield. Finally, pairwise Granger causality test confirmed that both climatic and non-climatic factors are significantly influencing agriculture and cereal production in India. Based on these results, policymakers and governmental institutions should formulate coherent adaptation measures and mitigation policies to tackle the adverse climate change effects on agriculture and its production of cereals.
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Affiliation(s)
- Abbas Ali Chandio
- College of Economics, Sichuan Agricultural University, Chengdu, 611130, China.
| | - Yuansheg Jiang
- College of Economics, Sichuan Agricultural University, Chengdu, 611130, China.
| | - Asad Amin
- College of Economics and Management, Nanjing University of Aeronautics and Astronautics, Nanjing, 211106, China
| | - Waqar Akram
- Department of Business Administration, Sukkur IBA University, Sukkur, Sindh, Pakistan
| | - Ilhan Ozturk
- Faculty of Economics and Administrative Sciences, Cag University, 33800, Mersin, Turkey
- Department of Medical Research, China Medical University Hospital, China Medical University, Taichung, Taiwan
- Department of Finance, Asia University, 500, Lioufeng Rd., Wufeng, Taichung, 41354, Taiwan
| | - Avik Sinha
- Centre for Excellence in Sustainable Development, Goa Institute of Management, Sattari, India
| | - Fayyaz Ahmad
- School of Economics, Lanzhou University, Lanzhou, 730000, China
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39
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Water Demand in Maize Is Projected to Decrease under Changing Climate in India. SUSTAINABILITY 2022. [DOI: 10.3390/su14031419] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Crop stage-specific information on the impacts of projected climate change on crop and irrigation water requirements are essential for improving productivity. This study investigated the possible implications of projected climate change on the phenology, effective rainfall (Peff), crop (CWR) and irrigation water requirements (IWR) of maize in eight locations in India. CWR, Peff and IWR were estimated for seven crop stages viz., emergence, 5th leaf stage, tasseling, silking, milking, dough and maturity during the baseline (1980–2009) and near-century (2022–39) using climate data derived from a subset of 29 general circulation models. The results indicated that mean seasonal maximum temperature, minimum temperature and rainfall were projected to increase in all the locations. Hence, the total crop duration (3–7 days), CWR (8–69 mm) and IWR (1–54 mm) were projected to decrease. The study could identify the specific stages in which the greatest reduction in crop duration, CWR and IWR would occur. Such information will be of immense help to farmers and varietal improvement programs in the study regions in the near future.
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Cushman JC, Denby K, Mittler R. Plant responses and adaptations to a changing climate. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 109:319-322. [PMID: 35076147 DOI: 10.1111/tpj.15641] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Accepted: 12/15/2021] [Indexed: 06/14/2023]
Affiliation(s)
- John C Cushman
- MS330/Department of Biochemistry & Molecular Biology, University of Nevada, 1664 N. Virginia St., Reno, NV, 89557-0330, USA
| | - Katherine Denby
- Centre for Novel Agricultural Products (CNAP), Department of Biology, University of York, Wentworth Way, York, YO10 5DD, UK
| | - Ron Mittler
- The Division of Plant Science and Technology and Interdisciplinary Plant Group, College of Agriculture, Food and Natural Resources, Christopher S. Bond Life Sciences Center, University of Missouri, 1201 Rollins St., Columbia, MO, 65201, USA
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Kastner T, Matej S, Forrest M, Gingrich S, Haberl H, Hickler T, Krausmann F, Lasslop G, Niedertscheider M, Plutzar C, Schwarzmüller F, Steinkamp J, Erb KH. Land use intensification increasingly drives the spatiotemporal patterns of the global human appropriation of net primary production in the last century. GLOBAL CHANGE BIOLOGY 2022; 28:307-322. [PMID: 34651392 DOI: 10.1111/gcb.15932] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Revised: 09/25/2021] [Accepted: 10/04/2021] [Indexed: 06/13/2023]
Abstract
Land use has greatly transformed Earth's surface. While spatial reconstructions of how the extent of land cover and land-use types have changed during the last century are available, much less information exists about changes in land-use intensity. In particular, global reconstructions that consistently cover land-use intensity across land-use types and ecosystems are missing. We, therefore, lack understanding of how changes in land-use intensity interfere with the natural processes in land systems. To address this research gap, we map land-cover and land-use intensity changes between 1910 and 2010 for 9 points in time. We rely on the indicator framework of human appropriation of net primary production (HANPP) to quantify and map land-use-induced alterations of the carbon flows in ecosystems. We find that, while at the global aggregate level HANPP growth slowed down during the century, the spatial dynamics of changes in HANPP were increasing, with the highest change rates observed in the most recent past. Across all biomes, the importance of changes in land-use areas has declined, with the exception of the tropical biomes. In contrast, increases in land-use intensity became the most important driver of HANPP across all biomes and settings. We conducted uncertainty analyses by modulating input data and assumptions, which indicate that the spatial patterns of land use and potential net primary production are the most critical factors, while spatial allocation rules and uncertainties in overall harvest values play a smaller role. Highlighting the increasing role of land-use intensity compared to changes in the areal extent of land uses, our study supports calls for better integration of the intensity dimension into global analyses and models. On top of that, we provide important empirical input for further analyses of the sustainability of the global land system.
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Affiliation(s)
- Thomas Kastner
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Sarah Matej
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Matthew Forrest
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany
| | - Simone Gingrich
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Helmut Haberl
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Thomas Hickler
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany
- Department of Physical Geography, Goethe University, Frankfurt/Main, Germany
| | - Fridolin Krausmann
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
| | - Gitta Lasslop
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany
| | - Maria Niedertscheider
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
- Grüner Klub im Parlament, Vienna, Austria
| | - Christoph Plutzar
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
- Division of Conservation Biology, Vegetation Ecology and Landscape Ecology, University of Vienna, Vienna, Austria
| | | | - Jörg Steinkamp
- Senckenberg Biodiversity and Climate Research Centre, Frankfurt, Germany
- Johannes Gutenberg-Universität Mainz, Zentrum für Datenverarbeitung, Mainz, Germany
| | - Karl-Heinz Erb
- Institute of Social Ecology, University of Natural Resources and Life Sciences, Vienna, Austria
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Zenda T, Liu S, Dong A, Li J, Wang Y, Liu X, Wang N, Duan H. Omics-Facilitated Crop Improvement for Climate Resilience and Superior Nutritive Value. FRONTIERS IN PLANT SCIENCE 2021; 12:774994. [PMID: 34925418 PMCID: PMC8672198 DOI: 10.3389/fpls.2021.774994] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Accepted: 11/08/2021] [Indexed: 05/17/2023]
Abstract
Novel crop improvement approaches, including those that facilitate for the exploitation of crop wild relatives and underutilized species harboring the much-needed natural allelic variation are indispensable if we are to develop climate-smart crops with enhanced abiotic and biotic stress tolerance, higher nutritive value, and superior traits of agronomic importance. Top among these approaches are the "omics" technologies, including genomics, transcriptomics, proteomics, metabolomics, phenomics, and their integration, whose deployment has been vital in revealing several key genes, proteins and metabolic pathways underlying numerous traits of agronomic importance, and aiding marker-assisted breeding in major crop species. Here, citing several relevant examples, we appraise our understanding on the recent developments in omics technologies and how they are driving our quest to breed climate resilient crops. Large-scale genome resequencing, pan-genomes and genome-wide association studies are aiding the identification and analysis of species-level genome variations, whilst RNA-sequencing driven transcriptomics has provided unprecedented opportunities for conducting crop abiotic and biotic stress response studies. Meanwhile, single cell transcriptomics is slowly becoming an indispensable tool for decoding cell-specific stress responses, although several technical and experimental design challenges still need to be resolved. Additionally, the refinement of the conventional techniques and advent of modern, high-resolution proteomics technologies necessitated a gradual shift from the general descriptive studies of plant protein abundances to large scale analysis of protein-metabolite interactions. Especially, metabolomics is currently receiving special attention, owing to the role metabolites play as metabolic intermediates and close links to the phenotypic expression. Further, high throughput phenomics applications are driving the targeting of new research domains such as root system architecture analysis, and exploration of plant root-associated microbes for improved crop health and climate resilience. Overall, coupling these multi-omics technologies to modern plant breeding and genetic engineering methods ensures an all-encompassing approach to developing nutritionally-rich and climate-smart crops whose productivity can sustainably and sufficiently meet the current and future food, nutrition and energy demands.
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Affiliation(s)
- Tinashe Zenda
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
- Department of Crop Science, Faculty of Agriculture and Environmental Science, Bindura University of Science Education, Bindura, Zimbabwe
| | - Songtao Liu
- Academy of Agriculture and Forestry Sciences, Hebei North University, Zhangjiakou, China
| | - Anyi Dong
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Jiao Li
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Yafei Wang
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Xinyue Liu
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Nan Wang
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Huijun Duan
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
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Community-Level Impacts of Climate-Smart Agriculture Interventions on Food Security and Dietary Diversity in Climate-Smart Villages in Myanmar. CLIMATE 2021. [DOI: 10.3390/cli9110166] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Diversification of production to strengthen resilience is a key tenet of climate-smart agriculture (CSA), which can help to address the complex vulnerabilities of agriculture-dependent rural communities. In this study, we investigated the relationship between the promotion of different CSA practices across four climate-smart villages (CSVs) in Myanmar. To determine the impact of the CSA practices on livelihoods and health, survey data were collected from agricultural households (n = 527) over three years. Within the time period studied, the results indicate that some the CSA practices and technologies adopted were significantly associated with changes in household dietary diversity scores (HDDS), but, in the short-term, these were not associated with improvements in the households’ food insecurity scores (HFIAS). Based on the survey responses, we examined how pathways of CSA practice adoption tailored to different contexts of Myanmar’s four agroecologies could contribute to the observed changes, including possible resulting trade-offs. We highlight that understanding the impacts of CSA adoption on household food security in CSVs will require longer-term monitoring, as most CSA options are medium- to long-cycle interventions. Our further analysis of knowledge, attitudes and practices (KAPs) amongst the households indicated a poor understanding of the household knowledge, attitudes and practices in relation to nutrition, food choices, food preparation, sanitation and hygiene. Our KAP findings indicate that current nutrition education interventions in the Myanmar CSVs are inadequate and will need further improvement for health and nutrition outcomes from the portfolio of CSA interventions.
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Chandio AA, Gokmenoglu KK, Ahmad F. Addressing the long- and short-run effects of climate change on major food crops production in Turkey. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:51657-51673. [PMID: 33987728 PMCID: PMC8118750 DOI: 10.1007/s11356-021-14358-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Accepted: 05/06/2021] [Indexed: 05/04/2023]
Abstract
This study assessed the long-run (LR) and short-run (SR) impacts of climatic and non-climatic factors, i.e., CO2 emissions (CO2e), average level of temperature (ALT), average level of precipitation (ALP), area harvested of wheat and rice crops (AHW and (AHR), domestic credit (DCR), and agricultural labor (ALB) on wheat and rice production (WP and RP) in Turkey by using annual time series data ranging from 1980 to 2016 and by employing several econometric techniques. The autoregressive distributed lag-bounds (ARDL) approach and the Johansen and Juselius cointegration (JJC) test confirmed a valid long-term connection among underlying variables. The estimation results from the ARDL model reveal that climatic factors such as CO2 emissions and temperature adversely affected wheat production in the long run as well as in the short run, whereas precipitation positively improved wheat production in both periods. Further results indicate that non-climatic factors like area harvested of wheat and domestic credit positively and significantly enhanced wheat production in the long run and short run. Similarly, CO2 emissions also adversely affected rice production in both periods, while temperature and precipitation positively contributed towards rice production in both cases. In addition, area harvested of rice positively and significantly boosted rice production in the long run as well as in the short run, while domestic credit negatively influenced rice production in the long run but in the short run positively improved rice production. Additionally, the outcomes of the VECM Granger Causality for both rice and wheat production confirm that both climatic and non-climatic variables have a strong influence on the production of both crops. This study found that climate change has a deleterious influence on both wheat and rice production; therefore, the study suggests that temperature-resistant varieties of both crops should be developed and introduced by agricultural research institutions. In addition to this, up-to-date information is more needed related to climate change, and in the farming communities, it should be provided by agricultural extension workers.
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Affiliation(s)
- Abbas Ali Chandio
- College of Economics, Sichuan Agricultural University, Chengdu, 611130, China.
| | - Korhan K Gokmenoglu
- Department of Banking and Finance, Eastern Mediterranean University, North Cyprus via Mersin, 10, Famagusta, Turkey
| | - Fayyaz Ahmad
- School of Economics, Lanzhou University, Lanzhou, 730000, China
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Comparative response of rice cultivars to elevated air temperature in Bhabar region of Indian Himalaya: status on yield attributes. Heliyon 2021; 7:e07474. [PMID: 34401552 PMCID: PMC8353292 DOI: 10.1016/j.heliyon.2021.e07474] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2021] [Revised: 06/05/2021] [Accepted: 06/30/2021] [Indexed: 11/22/2022] Open
Abstract
Increasing atmospheric temperature is the consequence of global warming, which is expected to influence crop growth and development, resulting in declining productivity in the tropical agriculture system. The selection of temperature tolerant crop cultivars with higher productivity to meet the future demand of the world expanding human population requires a thorough understanding of crop growth feedback to increasing temperature. Therefore, a field experiment was conducted during the Kharif season of 2012 and 2013 to understand the response of yield and yield-related traits of eleven rice cultivars to elevated temperature grown inside field mounted temperature gradient tunnel (TGT) in the Bhabar region of the Indian Himalayas. The elevated temperature significantly impacted growth and yield and yield-related traits, especially tillers, panicles, filled and chaffy grains, grain, and 1000 grain weight, yield, and harvest index of all the cultivars during both years. The cultivars, i.e., IET 21404 and IET 21577, were reported to produced more tillers in 2012, whereas IET 21411 and KRH 2 had a maximum 2013. Likewise, maximum panicles were reported in IET 21404 and IET 21577 in 2012, while IET 21411, IET 21582, and KRH 2 in 2013 under elevated temperature. The highest grain filling under high temperature in 2012 was found in IET 21577, then IET 21404; however, IET 21411 and IET 21405 were the highest filled grains in 2013. Consequently, the cultivars IET 21577 and IET 21404 were reported as more tolerant towards yielding higher grain weight and Harvest Index. This study offers an opportunity to screen temperature tolerant cultivars with increased productivity for fulfilling the demand of rice-dependent regions in future changing climatic conditions.
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Maharajan T, Antony Ceasar S, Ajeesh Krishna TP, Ignacimuthu S. Finger Millet [Eleusine coracana (L.) Gaertn]: An Orphan Crop With a Potential to Alleviate the Calcium Deficiency in the Semi-arid Tropics of Asia and Africa. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2021. [DOI: 10.3389/fsufs.2021.684447] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023] Open
Abstract
Finger millet plays a vital role in the food and nutritional security of many people in developing countries particularly in Asia and Africa. It is a staple food for poor people in many regions of Asian (India, China, Nepal, and Sri Lanka etc.) and African (South Africa, Ethiopia, Kenya, Uganda, and Nigeria etc.) countries. Finger millet contains nutrient rich components such as dietary fibers, minerals, vitamins, and phytochemicals that include phenolic compounds with several potential health benefits. Calcium (Ca) is an important macronutrient for healthy life of plants, humans and animals. It plays an indispensable role in structure and signaling and its deficiency causes low bone density, osteoporosis, colon cancer etc. Finger millet grains contain exceptionally higher amount of Ca (>300 mg/100 g) when compared to other major cereals. Ca transporter and sensor family genes are involved in the uptake, transport and accumulation of Ca. Understanding the molecular mechanisms of Ca transporter and sensor family genes is important for growth, development and seed fortification in finger millet. Expression analysis of Ca transporter and sensor family genes has been carried out in various tissues of finger millet. Only a very little research work has been done to understand the Ca accumulation in the grains of finger millet. In this review, we discuss the nutritional importance and health benefits of finger millet. We discuss the studies on Ca sensor, accumulation and transport genes that help to improve the grains of finger millet with special reference to Ca. Improved Ca content in finger millet may help to alleviate the Ca deficiency throughout the world particularly in the semi-arid tropics of Asia and Africa.
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Rasul G. A Framework for Addressing the Twin Challenges of COVID-19 and Climate Change for Sustainable Agriculture and Food Security in South Asia. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2021. [DOI: 10.3389/fsufs.2021.679037] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Climate change has begun to ravage agriculture and threaten food security in many parts of the world. The novel coronavirus pandemic (COVID-19) has further disrupted agricultural activities and supply chains and has become a serious threat for public health. Like in many developing countries, South Asian farmers are now facing the double challenge of addressing the impacts of a changing climate and managing the disruptions caused by COVID-19. Despite growing concern, there is limited understanding of how climate change, public health, and COVID-19 interact, and of the possible pathways to achieving a climate-friendly recovery from COVID-19 to achieve food and nutrition security. In view of this, this paper explores the multifaceted challenges that farmers are now facing in South Asia due to climate change and the disruption caused by COVID-19 from the agricultural and food security lens. The analysis reveals that the complex interactions of COVID-19 and climate change have impacted all dimensions of food security. These interlinkages demand an integrated approach in dealing with food, public health, and climate change to harness synergies and minimize trade-offs between food production, public health, and climate mitigation. I present a framework to address the immediate challenge of COVID-19 and the longer-term challenge of anthropogenic climate change. Key elements of the framework include the strengthening health sector response capacities, strengthening of local and regional food systems, making agriculture resilient to pandemics, adopting flexible and smart approaches—including the implementation of climate-smart agricultural interventions on different scales, promotion of appropriate research and innovation, and the integration of short-term support to address the challenges of COVID-19 to build long-term productivity, and resilience of food systems by investing on natural capital. This framework would enable policy makers to choose the appropriate policy responses at different scales, to address these twin challenges of COVID-19 and climate change.
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Kocięcka J, Liberacki D. The Potential of Using Chitosan on Cereal Crops in the Face of Climate Change. PLANTS 2021; 10:plants10061160. [PMID: 34200489 PMCID: PMC8229082 DOI: 10.3390/plants10061160] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 06/03/2021] [Accepted: 06/03/2021] [Indexed: 11/16/2022]
Abstract
This review presents the main findings from measurements carried out on cereals using chitosan, its derivatives, and nanoparticles. Research into the use of chitosan in agriculture is growing in popularity. Since 2000, 188 original scientific articles indexed in Web of Science, Scopus, and Google Scholar databases have been published on this topic. These have focused mainly on wheat (34.3%), maize (26.3%), and rice (24.2%). It was shown that research on other cereals such as millets and sorghum is scarce and should be expanded to better understand the impact of chitosan use. This review demonstrates that this chitosan is highly effective against the most dangerous diseases and pathogens for cereals. Furthermore, it also contributes to improving yield and chlorophyll content, as well as some plant growth parameters. Additionally, it induces excellent resistance to drought, salt, and low temperature stress and reduces their negative impact on cereals. However, further studies are needed to demonstrate the full field efficacy of chitosan.
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Zenda T, Liu S, Dong A, Duan H. Advances in Cereal Crop Genomics for Resilience under Climate Change. Life (Basel) 2021; 11:502. [PMID: 34072447 PMCID: PMC8228855 DOI: 10.3390/life11060502] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 05/21/2021] [Accepted: 05/25/2021] [Indexed: 12/12/2022] Open
Abstract
Adapting to climate change, providing sufficient human food and nutritional needs, and securing sufficient energy supplies will call for a radical transformation from the current conventional adaptation approaches to more broad-based and transformative alternatives. This entails diversifying the agricultural system and boosting productivity of major cereal crops through development of climate-resilient cultivars that can sustainably maintain higher yields under climate change conditions, expanding our focus to crop wild relatives, and better exploitation of underutilized crop species. This is facilitated by the recent developments in plant genomics, such as advances in genome sequencing, assembly, and annotation, as well as gene editing technologies, which have increased the availability of high-quality reference genomes for various model and non-model plant species. This has necessitated genomics-assisted breeding of crops, including underutilized species, consequently broadening genetic variation of the available germplasm; improving the discovery of novel alleles controlling important agronomic traits; and enhancing creation of new crop cultivars with improved tolerance to biotic and abiotic stresses and superior nutritive quality. Here, therefore, we summarize these recent developments in plant genomics and their application, with particular reference to cereal crops (including underutilized species). Particularly, we discuss genome sequencing approaches, quantitative trait loci (QTL) mapping and genome-wide association (GWAS) studies, directed mutagenesis, plant non-coding RNAs, precise gene editing technologies such as CRISPR-Cas9, and complementation of crop genotyping by crop phenotyping. We then conclude by providing an outlook that, as we step into the future, high-throughput phenotyping, pan-genomics, transposable elements analysis, and machine learning hold much promise for crop improvements related to climate resilience and nutritional superiority.
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Affiliation(s)
- Tinashe Zenda
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding 071001, China; (S.L.); (A.D.)
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding 071001, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding 071001, China
- Department of Crop Science, Faculty of Agriculture and Environmental Science, Bindura University of Science Education, Bindura P. Bag 1020, Zimbabwe
| | - Songtao Liu
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding 071001, China; (S.L.); (A.D.)
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding 071001, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding 071001, China
| | - Anyi Dong
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding 071001, China; (S.L.); (A.D.)
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding 071001, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding 071001, China
| | - Huijun Duan
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding 071001, China; (S.L.); (A.D.)
- North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding 071001, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding 071001, China
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Zhang C, Yang Y, Feng Z, Xiao C, Lang T, Du W, Liu Y. Risk of Global External Cereals Supply under the Background of the COVID-19 Pandemic: Based on the Perspective of Trade Network. Foods 2021; 10:1168. [PMID: 34071044 PMCID: PMC8246323 DOI: 10.3390/foods10061168] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Revised: 05/18/2021] [Accepted: 05/20/2021] [Indexed: 01/14/2023] Open
Abstract
International food trade is an integral part of the food system, and the COVID-19 pandemic has exposed the fragility of external food supplies. Based on the perspective of cereals trade networks (CTN), the pandemic risk is combined with the trade intensity between countries, and an assessment model of cereals external supply risk is constructed that includes external dependence index (EDI), import concentration, and risk of COVID-19 from import countries index (RICI). The results show that: (1) the global main CTN have typical scale-free characteristics, and seven communities are detected under the influence of the core countries; (2) about 60%, 50%, and 70% of countries face risks of medium and above (high and very high) external dependence, concentration of imports, and COVID-19 in the country of origin, respectively. Under the influence of the pandemic, the risk of global external cereal supply index (RECSI) has increased by 65%, and the USA-CAN communities show the highest risk index; (3) the countries with a very high risk are mainly the Pacific island countries and the Latin American and African countries. In addition, Japan, Mexico, South Korea, and 80% of the net food-importing developing countries are at high or very high RECSI levels. Approximately 50% of countries belong to the compound risk type, and many export countries belong to the RICI risk type; (4) global external food supply is subjected to multiple potential threats such as trade interruption, "price crisis", and "payment dilemma". The geographical proximity of community members and the geographical proximity of the pandemic risk is superimposed, increasing the regional risk of external food supply; and (5) this study confirms that the food-exporting countries should avoid the adoption of food export restriction measures and can prevent potential external supply risks from the dimensions of maintaining global food liquidity and promoting diversification of import sources. We believe that our assessment model of cereals external supply risk comprises a useful method for investigations regarding the international CTN or global food crisis under the background of the pandemic.
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Affiliation(s)
- Chao Zhang
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
- Faculty of Geographical Science, Beijing Normal University, Beijing 100875, China
| | - Yanzhao Yang
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
- Key Laboratory of Carrying Capacity Assessment for Resource and Environment, Ministry of Natural Resources, Beijing 100101, China
| | - Zhiming Feng
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
- Key Laboratory of Carrying Capacity Assessment for Resource and Environment, Ministry of Natural Resources, Beijing 100101, China
| | - Chiwei Xiao
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Tingting Lang
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wenpeng Du
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ying Liu
- Institute of Geographic Sciences and Natural Resources Research, CAS, Beijing 100101, China; (C.Z.); (Z.F.); (C.X.); (T.L.); (W.D.); (Y.L.)
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China
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