Potential of Karrikins as Novel Plant Growth Regulators in Agriculture

Complexity of SMAX1 signaling during seedling establishment

Karrikins (KARs) are small butenolide compounds identified in the smoke of burning vegetation. Along with the stimulating effects on seed germination, KARs also regulate seedling vigor and adaptive behaviors, such as seedling morphogenesis, root hair development, and stress acclimation. The pivotal KAR signaling repressor, SUPPRESSOR OF MAX2 1 (SMAX1), plays central roles in these developmental and morphogenic processes through an extensive signaling network that governs seedling responses to endogenous and environmental cues. Here, we summarize the versatile roles of SMAX1 reported in recent years and discuss how SMAX1 integrates multiple growth hormone signals into optimizing seedling establishment. We also discuss the evolutionary relevance of the SMAX1-mediated signaling pathways during the colonization of aqueous plants to terrestrial environments.

Effect of Biochar Application on Morpho-Physiological Traits, Yield, and Water Use Efficiency of Tomato Crop under Water Quality and Drought Stress

The use of saline water under drought conditions is critical for sustainable agricultural development in arid regions. Biochar is used as a soil amendment to enhance soil properties such as water-holding capacity and the source of nutrition elements of plants. Therefore, the experiment was conducted to evaluate the effects of biochar application on the morpho-physiological traits and yield of tomatoes under combined salinity and drought stress in greenhouses. There were 16 treatments consist two water quality fresh and saline (0.9 and 2.3 dS m^-1), three deficit irrigation levels (DI) 80, 60, and 40% addition 100% of Evapotranspiration (ETc), and biochar application by rate 5% (BC_5%) (w/w) and untreated soil (BC_0%). The results indicated that the salinity and water deficit negatively affected morphological, physiological, and yield traits. In contrast, the application of biochar improved all traits. The interaction between biochar and saline water leads to decreased vegetative growth indices, leaf gas exchange, the relative water content of leaves (LRWC), photosynthetic pigments, and yield, especially with the water supply deficit (60 and 40% ETc), where the yield decreased by 42.48% under the highest water deficit at 40% ETc compared to the control. The addition of biochar with freshwater led to a significantly increased vegetative growth, physiological traits, yield, water use efficiency (WUE), and less proline content under all various water treatments compared to untreated soil. In general, biochar combined with DI and freshwater could improve morpho-physiological attributes, sustain the growth of tomato plants, and increase productivity in arid and semi-arid regions.

Karrikin increases tomato cold tolerance via strigolactone and the abscisic acid signaling network

As a class of biostimulants, karrikins (KARs) were first identified from plant-derived smoke to regulate plant growth, development, and stress tolerance. However, the roles of KARs in plant cold tolerance and their crosstalk with strigolactones (SLs) and abscisic acid (ABA) remain elusive. We studied the interaction among KAR, SLs, and ABA in cold acclimatization with KAI2-, MAX1-, SnRK2.5-silenced, or cosilenced plant materials. KAI2 is involved in smoke-water- (SW-) and KAR-mediated cold tolerance. MAX1 acts downstream of KAR in cold acclimation. ABA biosynthesis and sensitivity are regulated by KAR and SLs, which improve cold acclimation through the SnRK2.5 component. The physiological mechanisms of SW and KAR in improving growth, yield, and tolerance under a long-term sublow temperature environment were also studied. SW and KAR were shown to improve tomato growth and yield under sublow temperature conditions by regulating nutritional uptake, leaf temperature control, photosynthetic defense, ROS scavenging, and CBF transcriptional activation. Together, SW, which functions via the KAR-mediated SL and ABA signaling network, has potential application value for increasing cold tolerance in tomato production.

Alleviation of Associated Drought and Salinity Stress' Detrimental Impacts on an Eggplant Cultivar ('Bonica F1') by Adding Biochar

To investigate the impact of biochar on eggplant growth, physiology, and yield parameters under separate and associated drought and salt stress, a pot experiment was carried out. An eggplant variety ('Bonica F1') was exposed to one NaCl concentration (S1 = 300 mM), three irrigation regimes (FI: full irrigation; DI: deficit irrigation; ARD: alternate root-zone drying irrigation), and one dose of biochar (B1 = 6% by weight). Our findings demonstrated that associated drought and salt stress had a greater negative impact on 'Bonica F1' performance in comparison to single drought or salt stress. Whereas, adding biochar to the soil improved the ability of 'Bonica F1' to alleviate the single and associated effects of salt and drought stress. Moreover, in comparison to DI under salinity, biochar addition in ARD significantly increased plant height, aerial biomass, fruit number per plant, and mean fresh weight per fruit by 18.4%, 39.7%, 37.5%, and 36.3%, respectively. Furthermore, under limited and saline irrigation, photosynthetic rate (A_n), transpiration rate (E), and stomatal conductance (g_s) declined. In addition, the interaction between ARD and biochar effectively restored the equilibrium between the plant chemical signal (ABA) and hydraulic signal (leaf water potential). As a result, mainly under salt stress, with ARD treatment, intrinsic water use efficiency (WUE_i) and yield traits were much higher than those in DI. Overall, biochar in combination with ARD could be an efficient approach for preserving crop productivity.

Karrikin perception and signalling

Karrikins (KARs) are a class of butenolide compounds found in smoke that were first identified as seed germination stimulants for fire-following species. Early studies of KARs classified the germination and postgermination responses of many plant species and investigated crosstalk with plant hormones that regulate germination. The discovery that Arabidopsis thaliana responds to KARs laid the foundation for identifying mutants with altered KAR responses. Genetic analysis of KAR signalling revealed an unexpected link to strigolactones (SLs), a class of carotenoid-derived plant hormones. Substantial progress has since been made towards understanding how KARs are perceived and regulate plant growth, in no small part due to advances in understanding SL perception. KAR and SL signalling systems are evolutionarily related and retain a high degree of similarity. There is strong evidence that KARs are natural analogues of an endogenous signal(s), KAI2 ligand (KL), which remains unknown. KAR/KL signalling regulates many developmental processes in plants including germination, seedling photomorphogenesis, and root and root hair growth. KAR/KL signalling also affects abiotic stress responses and arbuscular mycorrhizal symbiosis. Here, we summarise the current knowledge of KAR/KL signalling and discuss current controversies and unanswered questions in this field.

Comparative genomics of five Valsa species gives insights on their pathogenicity evolution

Valsa is a genus of ascomycetes within the Valsaceae family. This family includes many wood destructive pathogens such as the well known Valsa mali and Valsa pyri which cause canker diseases in fruit trees and threaten the global fruit production. Lack of genomic information of this family is impeding our understandings about their evolution and genetic basis of their pathogenicity divergence. Here, we report genome assemblies of Valsa malicola, Valsa persoonii, and Valsa sordida which represent close relatives of Valsa mali and Valsa pyri with different host preferences. Comparative genomics analysis revealed that segmental rearrangements, inversions, and translocations frequently occurred among Valsa spp. genomes. Gene families that exhibited gene copy expansions tended to be associated with secondary metabolism, transmembrane transport, and pyrophosphatase activities. Orthologous genes in regions lost synteny exhibited significantly higher rate of synonymous substitution (KS) than those in regions retained synteny. Moreover, among these genes, membrane transporter families associated with antidrug (MFS, DHA) activities and nutrient transportation (SP and APCs) activities were significantly over-represented. Lineage specific synonymous substitution (KS) and nonsynonymous substitution (KA) analysis based on the phylogeny constructed from 11 fungal species identified a set of genes with selection signatures in Valsa clade and these genes were significantly enriched in functions associated with fatty acid beta-oxidation, DNA helicase activity, and ATPase activity. Furthermore, unique genes that possessed or retained by each of the five Valsa species are more likely part of the secondary metabolic (SM) gene clusters. SM gene clusters conserved across five Valsa species showed various degrees of diversification in both identity and completeness. All 11 syntenically conserved SM clusters showed differential expression during the infection of apple branch with Valsa mali suggesting involvements of secondary metabolism in the pathogenicity of Valsa species.

Exogenous strigolactones enhance tolerance in soybean seedlings in response to alkaline stress

The plant hormone strigolactones (SLs) play crucial roles in regulating plant development and adaptations to abiotic stresses. Even though the functional roles of SLs have been identified in response to abiotic stresses, the function, and mechanism of SLs are not fully established under alkaline stress. In this study, we identified that exogenous SL could improve alkaline tolerance of soybean seedlings, especially when treated with 0.5 μM SL. The application of SL remarkably reduced the malondialdehyde content, hydrogen peroxide content, and increased the activity of antioxidant enzymes under alkaline stress, suggesting that SL improved the alkaline tolerance by regulating the antioxidant defense capacity. The RNA sequencing data showed 530 special differentially expressed genes under SL treatment and alkaline stress, mainly were associated with antioxidant processes and phenylpropanoid biosynthetic pathway. Some transcription factors were also induced by SL under alkaline stress as confirmed by quantitative real-time PCR (qRT-PCR). Furthermore, SL largely increased the Na content in leaves and decreased Na content in roots under alkaline stress, which suggested that SL might promote the transport of Na from the roots to the leaves of the soybean seedlings. Meanwhile, exogenous SL decreased the content of other elements such as K, Mg, Fe, and Cu in leaves or roots under alkaline stress. Collectively, our results suggested a role of SL in regulating antioxidant defense capacity, specific gene expression, and alterations in ionic contents to alleviate harmful effects of alkaline stress in soybean seedlings.

KARRIKIN UP-REGULATED F-BOX 1 (KUF1) imposes negative feedback regulation of karrikin and KAI2 ligand metabolism in Arabidopsis thaliana

SignificanceKarrikins are chemicals in smoke that stimulate regrowth of many plants after fire. However, karrikin responses are not limited to species from fire-prone environments and can affect growth after germination. Putatively, this is because karrikins mimic an unknown signal in plants, KAI2 ligand (KL). Karrikins likely require modification in plants to become bioactive. We identify a gene, KUF1, that appears to negatively regulate biosynthesis of KL and metabolism of a specific karrikin. KUF1 expression increases in response to karrikin or KL signaling, thus forming a negative feedback loop that limits further activation of the signaling pathway. This discovery will advance understanding of how karrikins are perceived and how smoke-activated germination evolved. It will also aid identification of the elusive KL.

Influence of tied-ridge-furrow with inorganic fertilizer on grain yield across semiarid regions of Asia and Africa: A meta-analysis

Background

In semiarid areas, low productivity of crops has been attributed to lack of appropriate soil moisture conservation practices since droughts and soil erosion are rampant in most areas of this region. Consequently, ridge-furrow rainwater harvesting is widely used in these regions across the globe. Despite ridge-furrow being widely practiced, tied-ridge-furrow has not been extensively adopted by small-scale farmers in semi-arid regions. Consequently, the effectiveness of tied-ridge-furrow as a viable method of increasing crop yield has received less attention.

Methodology

For large-scale implementation, a detailed assessment of how ridge furrow, tied–ridge-furrow with fertilizer, tied-ridge-furrow with mulching and tied-ridge-furrow without mulching or fertilizer influence crop yield in different agro-environments under varying climatic conditions is needed. This study used the PRISMA guidelines to determine the impact of tied-ridge-furrow rainwater harvesting technique with mulching or fertilizer on sorghum (Sorghum bicolor) and pearl millet (Pennisetum glaucum) grain yields.

Results

Sorghum grain yield increased by 17% greater in tied-ridge-furrow without mulching or fertilizer in comparison to flat planting. This may be due to increase in soil organic carbon in the region (9 g kg⁻¹). Grain yield of millet significantly increased by 20–40% in Africa from 18 study observations in tied-ridge-furrow with fertilizer application as compared to tied-ridge-furrow without mulching or fertilizer treatments. This might be due to the significant increase in total nitrogen by 13–42% in the soil at <50 mg kg⁻¹ quantity which had an effect size of 469.14 [65.60, 872.67]. In terms of soil texture, grain yield of millet and sorghum significantly increased in heavy textured soils (clay loam, silt clay, and clay soils) with an effect size of 469.14 [65.60, 872.67] compared to light and medium-textured soils of zero effect sizes. Millet and sorghum grain yields in tied-ridge-furrow with mulching, on the other hand, were not significantly different from those in flat planting. This may be due to the mulching materials used in those tests.

Conclusion

In view of yields of sorghum and millet increased significantly by 32% and 17% in tied-ridge-furrow without mulching or fertilizer treatment compared to flat planting and tied-ridge-furrow with fertilizer treatment compared with tied-ridge-furrow without mulching or fertilizer treatment, respectively, this study recommend the use of fertilizers in a tied-ridge-furrow system to increase grain yield in semiarid areas compared to flat planting. Again, the study recommends more research on tied-ridge-furrow systems with other organic mulches and fertilizers in semiarid areas.

Influence of plastic film mulch with biochar application on crop yield, evapotranspiration, and water use efficiency in northern China: A meta-analysis

Background

China is the leading consumer of plastic film worldwide. Plastic film mulched ridge-furrow is one of the most widely adopted agronomic and field management practices in rain-fed agriculture in dry-land areas of China. The efficiency of plastic film mulching as a viable method to decrease evapotranspiration (ET), increase crop yields, and water use efficiency (WUE), has been demonstrated extensively by earlier studies.

Methods

A comprehensive evaluation of how co-application of plastic-film mulch and biochar in different agro-environments under varying climatic conditions influence ET, crop yield, WUE, and soil microbial activity were assessed. We performed a meta-analysis using the PRISMA guideline to assess the effect of plastic-film mulched ridge-furrow and biochar on ET, yield, and WUE of wheat (Triticum aestivum L.), potato (Solanum tuberosum L.), and maize (Zea mays L.) in northern China.

Results

The use of plastic film increased average yields of wheat (75.7%), potato (20.2%), and maize (12.9%) in Gansu, Ningxia, Shaanxi, and Shanxi provinces, respectively due to the reduction in ET by 12.8% in Gansu, 0.5% in Ningxia, and 4.1% in Shanxi, but increased in Shaanxi by 0.5% compared to no-mulching. These changes may be attributed to the effect of plastic film mulch application which simultaneously increased WUE by 68.5% in Gansu, 23.9% in Ningxia, 16.2% in Shaanxi, and 12.8% in Shanxi, respectively. Compared to flat planting without mulching, in three years, the yield of maize increased with the co-application of plastic film and biochar by 22.86% in the Shanxi and Shaanxi regions.

Conclusion

Our analysis revealed co-application of plastic film with biochar is integral for improving soil and water conservation in rain-fed agriculture and as an integrated practice to avert drought while simultaneously mitigating runoff and erosion.

Butanolide alleviated cadmium stress by improving plant growth, photosynthetic parameters and antioxidant defense system of brassica oleracea

Current study was performed to explore the effect of butanolide (KAR1) in mitigation of cadmium (Cd) induced toxicity in Brussels sprout (Brassica oleracea L.). Brussels sprout seeds, treated with 10-5 M, 10-7 M and 10-10 M solution of KAR1 were allowed to grow in Cd-contaminated (5 mg L-1) regimes for 25 d. Cadmium toxicity decreased seed germination and growth in B. oleracea seedlings. Elevated intensity of electrolyte leakage (EL), malondialdehyde (MDA) and hydrogen peroxide (H₂O₂) were observed in Cd-stressed seedlings. Additionally, reduced level of stomatal conductivity, transpiration rate, photosynthesis rate, intercellular carbon dioxide concentration, and leaf relative water content (LRWC) was also observed in Cd-stressed seedlings. Nevertheless, KAR1 improved seed germination, seedling growth and biomass production in Cd stressed plants. KAR1 application showed elevated LRWC, osmotic potential, and higher membranous stability index (MSI) in seedlings under Cd regime. Furthermore, seedlings developed by KAR1 treatment exhibited higher stomatal conductivity, and intercellular carbon dioxide concentration together with improved rate of transpiration and photosynthetic rate in B. oleracea under Cd stress. These findings elucidate that the reduced level of MDA, EL and H₂O₂, as well as improvement in antioxidative machinery increased growth and alleviated Cd toxicity in KAR1 treated seedlings under Cd stress.

Phytohormone synthesis pathways in sweet briar rose (Rosa rubiginosa L.) seedlings with high adaptation potential to soil drought

The study aimed to determine the phytohormone profile of sweet briar rose (Rosa rubiginosa L.) seedlings and privileged synthesis pathways of individual hormones including gibberellins, cytokinins and auxins in response to long-term soil drought. We detected eight gibberellins, nine auxins and fifteen cytokinins. Abscisic acid (ABA) was also detected as a sensitive indicator of water stress. Thirty days of soil drought induced significant increase of ABA content and species-specific quantitative changes of other phytohormones. We established preferred synthesis pathways for three gibberellins, six auxins and eight cytokinins. Both an increase and decrease in gibberellin and cytokinin levels may modulate sweet briar's response to soil water shortage. In the case of auxins, induction of effective adaptation mechanisms to extremely dry environments is mostly triggered by their rising levels. Under drought stress, sweet briar seedlings increased their gibberellin pool at the expense of reducing the pool of cytokinins and auxins. This may indicate a specific role of gibberellins in adaptation mechanisms to long-term soil water deficit developed by sweet briar.

Biochar Mitigates Combined Effects of Drought and Salinity Stress in Quinoa

Abiotic stresses such as drought and salinity constantly threaten food security. Biochar as a soil amendment has the potential to ameliorate soil and alleviate drought and salinity stress. Multiple studies have been conducted to evaluate the effect of biochar in alleviating independent drought or salinity stress. However, the potential of biochar in mitigating the combined drought and salinity stress on plants has not been studied so far. Therefore, a pot experiment was conducted in the climate-controlled chamber with the objective to investigate the effect of biochar on growth, physiology, and yield of quinoa under independent and combined drought and salinity stress. Quinoa plants were subjected to three irrigation treatments i.e., full irrigation (FI), deficit irrigation (DI), and alternate root-zone drying irrigation (ARD), two saline water treatments (0 and 400 mM) and two levels of biochar (0% and 5% by weight). In the FI treatment, plants were irrigated daily to maintain pot water-holding capacity. In limited irrigation treatments, 70% water of FI was applied either to the whole pot in DI or to one side of the pot alternating in ARD, respectively. The results showed that combined drought and salinity stress drastically affected growth and performance of quinoa compared to the independent drought or salinity stress. However, soil amendment with biochar had positive effect in mitigating both independent and combined effect of drought and salinity on quinoa plants. Furthermore, biochar amendment in ARD under salinity significantly enhanced plant height, shoot biomass, and grain by 11.7%, 18.8%, and 10.2% as compared with DI under salinity, respectively. In addition, leaf photosynthetic rate (An) and stomatal conductance (gs) decreased under limited saline irrigation. Moreover, the interactive effect of biochar and ARD efficiently adjusted the balance between chemical signal (leaf ABA) and hydraulic signal (leaf water potential). Thus, intrinsic water use efficiency (WUEi) and yield in ARD were significantly enhanced compared to DI, especially under salinity stress. Overall, biochar in combination with ARD might be a wise approach for sustaining crop productivity in salt affected and drought stressed areas of the world to ensure food security.