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Delavaux CS, Crowther TW, Bever JD, Weigelt P, Gora EM. Mutualisms weaken the latitudinal diversity gradient among oceanic islands. Nature 2024; 627:335-339. [PMID: 38418873 PMCID: PMC10937366 DOI: 10.1038/s41586-024-07110-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 01/24/2024] [Indexed: 03/02/2024]
Abstract
The latitudinal diversity gradient (LDG) dominates global patterns of diversity1,2, but the factors that underlie the LDG remain elusive. Here we use a unique global dataset3 to show that vascular plants on oceanic islands exhibit a weakened LDG and explore potential mechanisms for this effect. Our results show that traditional physical drivers of island biogeography4-namely area and isolation-contribute to the difference between island and mainland diversity at a given latitude (that is, the island species deficit), as smaller and more distant islands experience reduced colonization. However, plant species with mutualists are underrepresented on islands, and we find that this plant mutualism filter explains more variation in the island species deficit than abiotic factors. In particular, plant species that require animal pollinators or microbial mutualists such as arbuscular mycorrhizal fungi contribute disproportionately to the island species deficit near the Equator, with contributions decreasing with distance from the Equator. Plant mutualist filters on species richness are particularly strong at low absolute latitudes where mainland richness is highest, weakening the LDG of oceanic islands. These results provide empirical evidence that mutualisms, habitat heterogeneity and dispersal are key to the maintenance of high tropical plant diversity and mediate the biogeographic patterns of plant diversity on Earth.
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Affiliation(s)
- Camille S Delavaux
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
- Department of Ecology and Evolutionary Biology, The University of Kansas, Lawrence, KS, USA.
| | - Thomas W Crowther
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - James D Bever
- Department of Ecology and Evolutionary Biology, The University of Kansas, Lawrence, KS, USA
- Kansas Biological Survey, The University of Kansas, Lawrence, KS, USA
| | - Patrick Weigelt
- Department of Biodiversity, Macroecology and Biogeography, University of Göttingen, Göttingen, Germany
- Centre of Biodiversity and Sustainable Land Use, University of Göttingen, Göttingen, Germany
- Campus Institute Data Science, Göttingen, Germany
| | - Evan M Gora
- Smithsonian Tropical Research Institute, Panamá City, Panamá
- Cary Institute of Ecosystem Studies, Millbrook, NY, USA
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2
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Smith GR, Bello C, Bialic-Murphy L, Clark E, Delavaux CS, Fournier de Lauriere C, van den Hoogen J, Lauber T, Ma H, Maynard DS, Mirman M, Mo L, Rebindaine D, Reek JE, Werden LK, Wu Z, Yang G, Zhao Q, Zohner CM, Crowther TW. Ten simple rules for using large language models in science, version 1.0. PLoS Comput Biol 2024; 20:e1011767. [PMID: 38295118 PMCID: PMC10829980 DOI: 10.1371/journal.pcbi.1011767] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2024] Open
Affiliation(s)
- Gabriel Reuben Smith
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Carolina Bello
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Lalasia Bialic-Murphy
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Emily Clark
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Camille S. Delavaux
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | | | - Johan van den Hoogen
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Thomas Lauber
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Haozhi Ma
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Daniel S. Maynard
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
- Department of Genetics, Evolution and Environment, University College London, London, United Kingdom
| | - Matthew Mirman
- Anarchy, San Francisco, California, United States of America
| | - Lidong Mo
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Dominic Rebindaine
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Josephine Elena Reek
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Leland K. Werden
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Zhaofei Wu
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
- College of Water Sciences, Beijing Normal University, Beijing, China
| | - Gayoung Yang
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
- Sorbonne Université, Paris, France
| | - Qingzhou Zhao
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Constantin M. Zohner
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Thomas W. Crowther
- Department of Environmental Systems Science, Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
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3
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Delavaux CS, Angst JK, Espinosa H, Brown M, Petticord DF, Schroeder JW, Broders K, Herre EA, Bever JD, Crowther TW. Fungal community dissimilarity predicts plant-soil feedback strength in a lowland tropical forest. Ecology 2024; 105:e4200. [PMID: 37897325 DOI: 10.1002/ecy.4200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/18/2023] [Revised: 06/09/2023] [Accepted: 10/03/2023] [Indexed: 10/30/2023]
Abstract
Soil microbes impact plant community structure and diversity through plant-soil feedbacks. However, linking the relative abundance of plant pathogens and mutualists to differential plant recruitment remains challenging. Here, we tested for microbial mediation of pairwise feedback using a reciprocal transplant experiment in a lowland tropical forest in Panama paired with amplicon sequencing of soil and roots. We found evidence that plant species identity alters the microbial community, and these changes in microbial composition alter subsequent growth and survival of conspecific plants. We also found that greater community dissimilarity between species in their arbuscular mycorrhizal and nonpathogenic fungi predicted increased positive feedback. Finally, we identified specific microbial taxa across our target functional groups that differentially accumulated under conspecific settings. Collectively, these findings clarify how soil pathogens and mutualists mediate net feedback effects on plant recruitment, with implications for management and restoration.
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Affiliation(s)
- Camille S Delavaux
- Department of Environmental Systems Science, ETH, Zurich, Switzerland
- Department of Ecology and Evolutionary Biology, The University of Kansas, Lawrence, Kansas, USA
- Kansas Biological Survey, The University of Kansas, Lawrence, Kansas, USA
- Smithsonian Tropical Research Institute, Panama City, Panama
| | - Janika K Angst
- Department of Environmental Systems Science, ETH, Zurich, Switzerland
| | - Hilario Espinosa
- Smithsonian Tropical Research Institute, Panama City, Panama
- Department of Evolutionary and Environmental Biology, University of Haifa, Haifa, Israel
- Sistema Nacional de Investigación, SENACYT, Panama City, Panama
- Universidad de Panama, Facultad de Ciencias Naturales, Exactas y Tecnología, Departamento de Botánica, Panama City, Panama
- Coiba Scientific Station (Coiba AIP), Panama City, Panama
| | - Makenna Brown
- Department of Ecology and Evolutionary Biology, University of California Los Angeles, Los Angeles, California, USA
| | - Daniel F Petticord
- Smithsonian Tropical Research Institute, Panama City, Panama
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, New York, USA
| | | | - Kirk Broders
- Smithsonian Tropical Research Institute, Panama City, Panama
- Agricultural Research Service, National Center for Agricultural Utilization Research, Mycotoxin Prevention and Applied Microbiology Research Unit, Peoria, Illinois, USA
| | - Edward A Herre
- Smithsonian Tropical Research Institute, Panama City, Panama
| | - James D Bever
- Kansas Biological Survey, The University of Kansas, Lawrence, Kansas, USA
- Smithsonian Tropical Research Institute, Panama City, Panama
| | - Thomas W Crowther
- Department of Environmental Systems Science, ETH, Zurich, Switzerland
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4
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Delavaux CS, LaManna JA, Myers JA, Phillips RP, Aguilar S, Allen D, Alonso A, Anderson-Teixeira KJ, Baker ME, Baltzer JL, Bissiengou P, Bonfim M, Bourg NA, Brockelman WY, Burslem DFRP, Chang LW, Chen Y, Chiang JM, Chu C, Clay K, Cordell S, Cortese M, den Ouden J, Dick C, Ediriweera S, Ellis EC, Feistner A, Freestone AL, Giambelluca T, Giardina CP, Gilbert GS, He F, Holík J, Howe RW, Huaraca Huasca W, Hubbell SP, Inman F, Jansen PA, Johnson DJ, Kral K, Larson AJ, Litton CM, Lutz JA, Malhi Y, McGuire K, McMahon SM, McShea WJ, Memiaghe H, Nathalang A, Norden N, Novotny V, O'Brien MJ, Orwig DA, Ostertag R, Parker GG'J, Pérez R, Reynolds G, Russo SE, Sack L, Šamonil P, Sun IF, Swanson ME, Thompson J, Uriarte M, Vandermeer J, Wang X, Ware I, Weiblen GD, Wolf A, Wu SH, Zimmerman JK, Lauber T, Maynard DS, Crowther TW, Averill C. Mycorrhizal feedbacks influence global forest structure and diversity. Commun Biol 2023; 6:1066. [PMID: 37857800 PMCID: PMC10587352 DOI: 10.1038/s42003-023-05410-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Accepted: 10/02/2023] [Indexed: 10/21/2023] Open
Abstract
One mechanism proposed to explain high species diversity in tropical systems is strong negative conspecific density dependence (CDD), which reduces recruitment of juveniles in proximity to conspecific adult plants. Although evidence shows that plant-specific soil pathogens can drive negative CDD, trees also form key mutualisms with mycorrhizal fungi, which may counteract these effects. Across 43 large-scale forest plots worldwide, we tested whether ectomycorrhizal tree species exhibit weaker negative CDD than arbuscular mycorrhizal tree species. We further tested for conmycorrhizal density dependence (CMDD) to test for benefit from shared mutualists. We found that the strength of CDD varies systematically with mycorrhizal type, with ectomycorrhizal tree species exhibiting higher sapling densities with increasing adult densities than arbuscular mycorrhizal tree species. Moreover, we found evidence of positive CMDD for tree species of both mycorrhizal types. Collectively, these findings indicate that mycorrhizal interactions likely play a foundational role in global forest diversity patterns and structure.
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Affiliation(s)
- Camille S Delavaux
- ETH Zurich, Department of Environmental Systems Science, Zurich, Switzerland.
| | - Joseph A LaManna
- Department of Biological Sciences, Marquette University, Milwaukee, WI, USA
| | - Jonathan A Myers
- Department of Biology, Washington University in St. Louis, St. Louis, MO, USA
| | | | - Salomón Aguilar
- Forest Global Earth Observatory, Smithsonian Tropical Research Institute, Panama City, Panama
| | - David Allen
- Department of Biology, Middlebury College, Middlebury, VT, USA
| | - Alfonso Alonso
- Center for Conservation and Sustainability, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC, USA
| | - Kristina J Anderson-Teixeira
- Forest Global Earth Observatory, Smithsonian Tropical Research Institute, Panama City, Panama
- Forest Global Earth Observatory, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC, USA
| | - Matthew E Baker
- Geography & Environmental Systems, University of Maryland, Baltimore County, Baltimore, MD, USA
| | | | - Pulchérie Bissiengou
- Herbier National du Gabon, Institut de Pharmacopée et de Médecine Traditionelle, Libreville, Gabon
| | - Mariana Bonfim
- Department of Biology, Temple Ambler Field Station, Temple University, Ambler, PA, USA
| | - Norman A Bourg
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC, USA
| | - Warren Y Brockelman
- National Biobank of Thailand, National Science and Technology Development Agency, Khlong Nueng, Pathum Thani, Thailand
| | | | - Li-Wan Chang
- Taiwan Forestry Research Institute, Taipei City, Taipei, Taiwan, ROC
| | - Yang Chen
- State Key Laboratory of Biocontrol, School of Ecology/School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Jyh-Min Chiang
- Department of Life Science, Tunghai University, Taichung City, Taiwan, ROC
| | - Chengjin Chu
- School of Life Sciences, Sun Yat-sen University, Guangzhou, China
| | - Keith Clay
- Department of Ecology and Evolutionary Biology, Tulane University, New Orleans, LA, USA
| | - Susan Cordell
- Institute of Pacific Islands Forestry, USDA Forest Service, Hilo, HI, USA
| | - Mary Cortese
- Department of Biology, Temple Ambler Field Station, Temple University, Ambler, PA, USA
| | - Jan den Ouden
- Department of Environmental Sciences, Wageningen University, Wageningen, The Netherlands
| | - Christopher Dick
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA
| | - Sisira Ediriweera
- Department of Science and Technology, Uva Wellassa University, Badulla, Sri Lanka
| | - Erle C Ellis
- Geography & Environmental Systems, University of Maryland, Baltimore County, Baltimore, MD, USA
| | - Anna Feistner
- Gabon Biodiversity Program, Center for Conservation and Sustainability, Smithsonian National Zoo and Conservation Biology Institute, Gamba, Gabon
| | - Amy L Freestone
- Department of Biology, Temple Ambler Field Station, Temple University, Ambler, PA, USA
| | - Thomas Giambelluca
- University of Hawaii at Manoa, 1910 East-West Rd., Honolulu, HI, USA
- Water Resources Research Center, University of Hawaii at Manoa, Honolulu, USA
| | | | - Gregory S Gilbert
- Environmental Studies Department, University of California, Santa Cruz, Santa Cruz, CA, USA
| | - Fangliang He
- Department of Renewable Resources, University of Alberta, Edmonton, Canada
| | - Jan Holík
- Department of Forest Ecology, Silva Tarouca Research Institute, Průhonice, Czech Republic
| | - Robert W Howe
- Department of Natural and Applied Sciences, University of Wisconsin-Green Bay, Green Bay, WI, USA
| | - Walter Huaraca Huasca
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Stephen P Hubbell
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Faith Inman
- Department of Biology, University of Hawaii, Hilo, HI, USA
| | - Patrick A Jansen
- Forest Global Earth Observatory, Smithsonian Tropical Research Institute, Panama City, Panama
- Department of Environmental Sciences, Wageningen University, Wageningen, The Netherlands
| | - Daniel J Johnson
- School of Forest Resources and Conservation, University of Florida, Gainesville, FL, USA
- School of Forest, Fisheries, and Geomatics Sciences, University of Florida, Gainesville, USA
| | - Kamil Kral
- Department of Forest Ecology, Silva Tarouca Research Institute, Průhonice, Czech Republic
| | - Andrew J Larson
- Department of Forest Management, W. A. Franke College of Forestry and Conservation, University of Montana, Missoula, MT, USA
- The Wilderness Institute, W. A. Franke College of Forestry and Conservation, University of Montana, Missoula, MT, USA
| | - Creighton M Litton
- University of Hawaii at Manoa, 1910 East-West Rd., Honolulu, HI, USA
- Department of Natural Resources and Environmental Management, University of Hawaii at Manoa, Honolulu, USA
| | - James A Lutz
- The Ecology Center, Utah State University, Logan, UT, USA
- Wildland Resources Department, Utah State University, Logan, UT, USA
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Krista McGuire
- Department of Biology, University of Oregon, Eugene, OR, USA
| | - Sean M McMahon
- Forest Global Earth Observatory, Smithsonian Environmental Research Center, Edgewater, NJ, USA
| | - William J McShea
- Conservation Ecology Center, Smithsonian Conservation Biology Institute, National Zoological Park, Washington, DC, USA
| | - Hervé Memiaghe
- Department of Biology, University of Oregon, Eugene, OR, USA
- Centre National de la Recherche Scientifique et Technologique, Ouagadougou, Burkina Faso
| | - Anuttara Nathalang
- National Biobank of Thailand, National Science and Technology Development Agency, Khlong Nueng, Pathum Thani, Thailand
| | - Natalia Norden
- Programa Ciencias de la Biodiversidad, Instituto de Investigacion de Recursos Biologicos Alexander von Humboldt, Bogota, Colombia
| | - Vojtech Novotny
- Biology Centre, Institute of Entomology, Czech Academy of Sciences, Budějovice, Czech Republic
| | - Michael J O'Brien
- Estación Experimental de Zonas Áridas, Consejo Superior de Investigaciones Científicas, Almería, Spain
| | - David A Orwig
- Harvard Forest, Harvard University, Petersham, MA, USA
| | | | | | - Rolando Pérez
- Forest Global Earth Observatory, Smithsonian Tropical Research Institute, Panama City, Panama
| | - Glen Reynolds
- The Royal Society SEARRP (UK/Malaysia), Kota Kinabalu, Sabah, Malaysia
| | - Sabrina E Russo
- School of Biological Sciences and Center for Plant Science Innovation, University of Nebraska - Lincoln, Lincoln, NE, USA
| | - Lawren Sack
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Pavel Šamonil
- Department of Forest Ecology, Silva Tarouca Research Institute, Průhonice, Czech Republic
| | - I-Fang Sun
- Department of Natural Resources and Environmental Studies, National Dong Hwa University, Hsinchu, Taiwan, ROC
| | - Mark E Swanson
- School of the Environment, Washington State University, Pullman, WA, USA
| | | | - Maria Uriarte
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, New York, NY, USA
| | - John Vandermeer
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA
| | - Xihua Wang
- Tiantong National Forest Ecosystem Observation and Research Station, School of Ecological and Environmental Sciences, East China Normal University, Shanghai, China
| | - Ian Ware
- U.S. Forest Service, Institute of Pacific Islands Forestry, Pacific Southwest Research Station, Hilo, HI, USA
| | - George D Weiblen
- Department of Plant & Microbial Biology, University of Minnesota, St. Paul, MN, USA
| | - Amy Wolf
- Department of Natural and Applied Sciences, University of Wisconsin-Green Bay, Green Bay, WI, USA
| | - Shu-Hui Wu
- Botanical Garden Division, Taiwan Forestry Research Institute, Taipei City, Taiwan, ROC
| | - Jess K Zimmerman
- Department of Environmental Sciences, University of Puerto Rico, Rio Piedras, Puerto Rico
| | - Thomas Lauber
- ETH Zurich, Department of Environmental Systems Science, Zurich, Switzerland
| | - Daniel S Maynard
- ETH Zurich, Department of Environmental Systems Science, Zurich, Switzerland
| | - Thomas W Crowther
- ETH Zurich, Department of Environmental Systems Science, Zurich, Switzerland
| | - Colin Averill
- ETH Zurich, Department of Environmental Systems Science, Zurich, Switzerland
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5
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Delavaux CS, Crowther TW, Zohner CM, Robmann NM, Lauber T, van den Hoogen J, Kuebbing S, Liang J, de-Miguel S, Nabuurs GJ, Reich PB, Abegg M, Adou Yao YC, Alberti G, Almeyda Zambrano AM, Alvarado BV, Alvarez-Dávila E, Alvarez-Loayza P, Alves LF, Ammer C, Antón-Fernández C, Araujo-Murakami A, Arroyo L, Avitabile V, Aymard GA, Baker TR, Bałazy R, Banki O, Barroso JG, Bastian ML, Bastin JF, Birigazzi L, Birnbaum P, Bitariho R, Boeckx P, Bongers F, Bouriaud O, Brancalion PHS, Brandl S, Brienen R, Broadbent EN, Bruelheide H, Bussotti F, Gatti RC, César RG, Cesljar G, Chazdon R, Chen HYH, Chisholm C, Cho H, Cienciala E, Clark C, Clark D, Colletta GD, Coomes DA, Cornejo Valverde F, Corral-Rivas JJ, Crim PM, Cumming JR, Dayanandan S, de Gasper AL, Decuyper M, Derroire G, DeVries B, Djordjevic I, Dolezal J, Dourdain A, Engone Obiang NL, Enquist BJ, Eyre TJ, Fandohan AB, Fayle TM, Feldpausch TR, Ferreira LV, Fischer M, Fletcher C, Frizzera L, Gamarra JGP, Gianelle D, Glick HB, Harris DJ, Hector A, Hemp A, Hengeveld G, Hérault B, Herbohn JL, Herold M, Hillers A, Honorio Coronado EN, Hui C, Ibanez TT, Amaral I, Imai N, Jagodziński AM, Jaroszewicz B, Johannsen VK, Joly CA, Jucker T, Jung I, Karminov V, Kartawinata K, Kearsley E, Kenfack D, Kennard DK, Kepfer-Rojas S, Keppel G, Khan ML, Killeen TJ, Kim HS, Kitayama K, Köhl M, Korjus H, Kraxner F, Laarmann D, Lang M, Lewis SL, Lu H, Lukina NV, Maitner BS, Malhi Y, Marcon E, Marimon BS, Marimon-Junior BH, Marshall AR, Martin EH, Martynenko O, Meave JA, Melo-Cruz O, Mendoza C, Merow C, Mendoza AM, Moreno VS, Mukul SA, Mundhenk P, Nava-Miranda MG, Neill D, Neldner VJ, Nevenic RV, Ngugi MR, Niklaus PA, Oleksyn J, Ontikov P, Ortiz-Malavasi E, Pan Y, Paquette A, Parada-Gutierrez A, Parfenova EI, Park M, Parren M, Parthasarathy N, Peri PL, Pfautsch S, Phillips OL, Picard N, Piedade MTTF, Piotto D, Pitman NCA, Polo I, Poorter L, Poulsen AD, Pretzsch H, Ramirez Arevalo F, Restrepo-Correa Z, Rodeghiero M, Rolim SG, Roopsind A, Rovero F, Rutishauser E, Saikia P, Salas-Eljatib C, Saner P, Schall P, Schepaschenko D, Scherer-Lorenzen M, Schmid B, Schöngart J, Searle EB, Seben V, Serra-Diaz JM, Sheil D, Shvidenko AZ, Silva-Espejo JE, Silveira M, Singh J, Sist P, Slik F, Sonké B, Souza AF, Miscicki S, Stereńczak KJ, Svenning JC, Svoboda M, Swanepoel B, Targhetta N, Tchebakova N, Ter Steege H, Thomas R, Tikhonova E, Umunay PM, Usoltsev VA, Valencia R, Valladares F, van der Plas F, Do TV, van Nuland ME, Vasquez RM, Verbeeck H, Viana H, Vibrans AC, Vieira S, von Gadow K, Wang HF, Watson JV, Werner GDA, Wiser SK, Wittmann F, Woell H, Wortel V, Zagt R, Zawiła-Niedźwiecki T, Zhang C, Zhao X, Zhou M, Zhu ZX, Zo-Bi IC, Maynard DS. Author Correction: Native diversity buffers against severity of non-native tree invasions. Nature 2023; 622:E2. [PMID: 37752352 PMCID: PMC10567547 DOI: 10.1038/s41586-023-06654-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/28/2023]
Affiliation(s)
- Camille S Delavaux
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
| | - Thomas W Crowther
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Constantin M Zohner
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Niamh M Robmann
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Thomas Lauber
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Johan van den Hoogen
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Sara Kuebbing
- The Forest School at The Yale School of the Environment, Yale University, New Haven, CT, USA
| | - Jingjing Liang
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
| | - Sergio de-Miguel
- Department of Crop and Forest Sciences, University of Lleida, Lleida, Spain
- Joint Research Unit CTFC-AGROTECNIO-CERCA, Solsona, Spain
| | | | - Peter B Reich
- Department of Forest Resources, University of Minnesota, St Paul, MN, USA
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
- Institute for Global Change Biology, and School for Environment and Sustainability, University of Michigan, Ann Arbor, MI, USA
| | - Meinrad Abegg
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Yves C Adou Yao
- UFR Biosciences, University Félix Houphouët-Boigny, Abidjan, Côte d'Ivoire
| | - Giorgio Alberti
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Udine, Italy
- Faculty of Science and Technology, Free University of Bolzano, Bolzano, Italy
| | - Angelica M Almeyda Zambrano
- Spatial Ecology and Conservation Laboratory, Department of Tourism, Recreation and Sport Management, University of Florida, Gainesville, FL, USA
| | | | | | | | - Luciana F Alves
- Center for Tropical Research, Institute of the Environment and Sustainability, UCLA, Los Angeles, CA, USA
| | - Christian Ammer
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Göttingen, Germany
| | - Clara Antón-Fernández
- Division of Forest and Forest Resources, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | | | - Luzmila Arroyo
- Museo de Historia Natural Noel kempff Mercado, Santa Cruz, Bolivia
| | | | - Gerardo A Aymard
- UNELLEZ-Guanare, Programa de Ciencias del Agro y el Mar, Herbario Universitario (PORT), Portuguesa, Venezuela
- Compensation International S. A. Ci Progress-GreenLife, Bogotá, Colombia
| | | | - Radomir Bałazy
- Department of Geomatics, Forest Research Institute, Raszyn, Poland
| | - Olaf Banki
- Naturalis Biodiversity Center, Leiden, The Netherlands
| | - Jorcely G Barroso
- Centro Multidisciplinar, Universidade Federal do Acre, Rio Branco, Brazil
| | - Meredith L Bastian
- Proceedings of the National Academy of Sciences, Washington, DC, USA
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA
| | - Jean-Francois Bastin
- TERRA Teach and Research Centre, Gembloux Agro Bio-Tech, University of Liege, Liege, Belgium
| | - Luca Birigazzi
- United Nation Framework Convention on Climate Change, Bonn, Germany
| | - Philippe Birnbaum
- Institut Agronomique néo-Calédonien (IAC), Nouméa, New Caledonia
- AMAP, University of Montpellier, Montpellier, France
- AMAP, University of Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Robert Bitariho
- Institute of Tropical Forest Conservation, Mbarara University of Sciences and Technology, Mbarara, Uganda
| | - Pascal Boeckx
- Isotope Bioscience Laboratory-ISOFYS, Ghent University, Ghent, Belgium
| | - Frans Bongers
- Wageningen University and Research, Wageningen, The Netherlands
| | - Olivier Bouriaud
- Integrated Center for Research, Development and Innovation in Advanced Materials, Nanotechnologies, and Distributed Systems for Fabrication and Control (MANSiD), Stefan cel Mare University of Suceava, Suceava, Romania
| | - Pedro H S Brancalion
- Department of Forest Sciences, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil
| | | | - Roel Brienen
- School of Geography, University of Leeds, Leeds, UK
| | - Eben N Broadbent
- Spatial Ecology and Conservation Laboratory, School of Forest Resources and Conservation, University of Florida, Gainesville, FL, USA
| | - Helge Bruelheide
- Institute of Biology, Geobotany and Botanical Garden, Martin Luther University Halle-Wittenberg, Halle-Wittenberg, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Filippo Bussotti
- Department of Agriculture, Food, Environment and Forest (DAGRI), University of Firenze, Florence, Italy
| | - Roberto Cazzolla Gatti
- Department of Biological, Geological, and Environmental Sciences, University of Bologna, Bologna, Italy
| | - Ricardo G César
- Department of Forest Sciences, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil
| | - Goran Cesljar
- Department of Spatial Regulation, GIS and Forest Policy, Institute of Forestry, Belgrade, Serbia
| | - Robin Chazdon
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
| | - Han Y H Chen
- Faculty of Natural Resources Management, Lakehead University, Thunder Bay, Ontario, Canada
| | - Chelsea Chisholm
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Hyunkook Cho
- Division of Forest Resources Information, Korea Forest Promotion Institute, Seoul, South Korea
| | - Emil Cienciala
- IFER-Institute of Forest Ecosystem Research, Jilove u Prahy, Czech Republic
- Global Change Research Institute CAS, Brno, Czech Republic
| | - Connie Clark
- Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - David Clark
- Department of Biology, University of Missouri-St Louis, St Louis, MO, USA
| | - Gabriel D Colletta
- Programa de Pós-graduação em Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil
| | - David A Coomes
- Department of Plant Sciences and Conservation Research Institute, University of Cambridge, Cambridge, UK
| | | | - José J Corral-Rivas
- Facultad de Ciencias Forestales y Ambientales, Universidad Juárez del Estado de Durango, Durango, Mexico
| | - Philip M Crim
- Department of Biology, West Virginia University, Morgantown, WV, USA
- Department of Physical and Biological Sciences, The College of Saint Rose, Albany, NY, USA
| | | | - Selvadurai Dayanandan
- Biology Department, Centre for Structural and Functional Genomics, Concordia University, Montreal, Quebec, Canada
| | - André L de Gasper
- Natural Science Department, Universidade Regional de Blumenau, Blumenau, Brazil
| | - Mathieu Decuyper
- Wageningen University and Research, Wageningen, The Netherlands
- World Agroforestry (ICRAF), Nairobi, Kenya
| | - Géraldine Derroire
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, INRAE), Université des Antilles, Université de la Guyane, Campus Agronomique, Kourou, France
| | - Ben DeVries
- Department of Geographical Sciences, University of Maryland, College Park, MD, USA
| | | | - Jiri Dolezal
- Institute of Botany, The Czech Academy of Sciences, Třeboň, Czech Republic
- Department of Botany, Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic
| | - Aurélie Dourdain
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, INRAE), Université des Antilles, Université de la Guyane, Campus Agronomique, Kourou, France
| | | | - Brian J Enquist
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA
- The Santa Fe Institute, Santa Fe, NM, USA
| | - Teresa J Eyre
- Queensland Herbarium, Department of Environment and Science, Toowong, Queensland, Australia
| | | | - Tom M Fayle
- School of Biological and Behavioural Sciences, Queen Mary University of London, London, UK
- Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Ceske Budejovice, Czech Republic
| | - Ted R Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | - Leandro V Ferreira
- Museu Paraense Emílio Goeldi. Coordenação de Ciências da Terra e Ecologia, Belém, Pará, Brazil
| | - Markus Fischer
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
| | | | - Lorenzo Frizzera
- Research and Innovation Center, Fondazione Edmund Mach, San Michele All'adige, Italy
| | - Javier G P Gamarra
- Forestry Division, Food and Agriculture Organization of the United Nations, Rome, Italy
| | - Damiano Gianelle
- Research and Innovation Center, Fondazione Edmund Mach, San Michele All'adige, Italy
| | | | | | - Andrew Hector
- Department of Plant Sciences, University of Oxford, Oxford, UK
| | - Andreas Hemp
- Department of Plant Systematics, University of Bayreuth, Bayreuth, Germany
| | | | - Bruno Hérault
- Cirad, UPR Forêts et Sociétés, University of Montpellier, Montpellier, France
- Department of Forestry and Environment, National Polytechnic Institute (INP-HB), Yamoussoukro, Côte d'Ivoire
| | - John L Herbohn
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
- Tropical Forests and People Research Centre, University of the Sunshine Coast, Maroochydore, Queensland, Australia
| | - Martin Herold
- Wageningen University and Research, Wageningen, The Netherlands
| | - Annika Hillers
- Centre for Conservation Science, The Royal Society for the Protection of Birds, Sandy, UK
- Wild Chimpanzee Foundation, Liberia Office, Monrovia, Liberia
| | | | - Cang Hui
- Centre for Invasion Biology, Department of Mathematical Sciences, Stellenbosch University, Stellenbosch, South Africa
- Theoretical Ecology Unit, African Institute for Mathematical Sciences, Cape Town, South Africa
| | - Thomas T Ibanez
- AMAP, University of Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Iêda Amaral
- National Institute of Amazonian Research, Manaus, Brazil
| | - Nobuo Imai
- Department of Forest Science, Tokyo University of Agriculture, Tokyo, Japan
| | - Andrzej M Jagodziński
- Institute of Dendrology, Polish Academy of Sciences, Kórnik, Poland
- Poznań University of Life Sciences, Department of Game Management and Forest Protection, Poznań, Poland
| | - Bogdan Jaroszewicz
- Faculty of Biology, Białowieża Geobotanical Station, University of Warsaw, Białowieża, Poland
| | - Vivian Kvist Johannsen
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Carlos A Joly
- Department of Plant Biology, Institute of Biology, University of Campinas, UNICAMP, Campinas, Brazil
| | - Tommaso Jucker
- School of Biological Sciences, University of Bristol, Bristol, UK
| | - Ilbin Jung
- Division of Forest Resources Information, Korea Forest Promotion Institute, Seoul, South Korea
| | - Viktor Karminov
- Forestry Faculty, Bauman Moscow State Technical University, Mytischi, Russia
| | | | - Elizabeth Kearsley
- CAVElab-Computational and Applied Vegetation Ecology, Department of Environment, Ghent University, Ghent, Belgium
| | - David Kenfack
- CTFS-ForestGEO, Smithsonian Tropical Research Institute, Balboa, Panama
| | - Deborah K Kennard
- Department of Physical and Environmental Sciences, Colorado Mesa University, Grand Junction, CO, USA
| | - Sebastian Kepfer-Rojas
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Gunnar Keppel
- UniSA STEM and Future Industries Institute, University of South Australia, Adelaide, South Australia, Australia
| | - Mohammed Latif Khan
- Department of Botany, Dr Harisingh Gour Vishwavidyalaya (A Central University), Sagar, India
| | | | - Hyun Seok Kim
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul, South Korea
- Interdisciplinary Program in Agricultural and Forest Meteorology, Seoul National University, Seoul, South Korea
- National Center for Agro Meteorology, Seoul, South Korea
- Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, South Korea
| | | | - Michael Köhl
- Institute for World Forestry, University of Hamburg, Hamburg, Germany
| | - Henn Korjus
- Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu, Estonia
| | - Florian Kraxner
- Biodiversity and Natural Resources Program, International Institute for Applied Systems Analysis (IIASA), Laxenburg, Austria
| | - Diana Laarmann
- Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu, Estonia
| | - Mait Lang
- Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu, Estonia
| | - Simon L Lewis
- School of Geography, University of Leeds, Leeds, UK
- Department of Geography, University College London, London, UK
| | - Huicui Lu
- Faculty of Forestry, Qingdao Agricultural University, Qingdao, China
| | - Natalia V Lukina
- Center for Forest Ecology and Productivity, Russian Academy of Sciences, Moscow, Russia
| | - Brian S Maitner
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Eric Marcon
- AgroParisTech, UMR-AMAP, Cirad, CNRS, INRA, IRD, Université de Montpellier, Montpellier, France
| | | | - Ben Hur Marimon-Junior
- Departamento de Ciências Biológicas, Universidade do Estado de Mato Grosso, Nova Xavantina, Brazil
| | - Andrew R Marshall
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
- Department of Environment and Geography, University of York, York, UK
- Flamingo Land, Malton, UK
| | - Emanuel H Martin
- Department of Wildlife Management, College of African Wildlife Management, Mweka, Tanzania
| | - Olga Martynenko
- Forestry Faculty, Bauman Moscow State Technical University, Mytischi, Russia
| | - Jorge A Meave
- Departamento de Ecología y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | | | - Casimiro Mendoza
- Colegio de Profesionales Forestales de Cochabamba, Cochabamba, Bolivia
| | - Cory Merow
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
| | - Abel Monteagudo Mendoza
- Jardín Botánico de Missouri, Pasco, Peru
- Universidad Nacional de San Antonio Abad del Cusco, Cusco, Peru
| | - Vanessa S Moreno
- Department of Forest Sciences, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil
| | - Sharif A Mukul
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
- Department of Environment and Development Studies, United International University, Dhaka, Bangladesh
| | - Philip Mundhenk
- Institute for World Forestry, University of Hamburg, Hamburg, Germany
| | - María Guadalupe Nava-Miranda
- Laboratorio de geomática, Instituto de Silvicultura e Industria de la Madera, Universidad Juárez del Estado de Durango, Durango, Mexico
- Programa de doctorado en Ingeniería para el desarrollo rural y civil, Escuela de Doctorado Internacional de la Universidad de Santiago de Compostela, Santiago de Compostela, Spain
- Department of Environment and Development Studies, United International University, Dhaka, Bangladesh
| | - David Neill
- Universidad Estatal Amazónica, Puyo, Pastaza, Ecuador
| | - Victor J Neldner
- Queensland Herbarium, Department of Environment and Science, Toowong, Queensland, Australia
| | | | - Michael R Ngugi
- Queensland Herbarium, Department of Environment and Science, Toowong, Queensland, Australia
| | - Pascal A Niklaus
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Zurich, Switzerland
| | - Jacek Oleksyn
- Institute of Dendrology, Polish Academy of Sciences, Kórnik, Poland
| | - Petr Ontikov
- Forestry Faculty, Bauman Moscow State Technical University, Mytischi, Russia
| | | | - Yude Pan
- Climate, Fire, and Carbon Cycle Sciences, USDA Forest Service, Durham, NC, USA
| | - Alain Paquette
- Centre for Forest Research, Université du Québec à Montréal, Montreal, Quebec, Canada
| | | | - Elena I Parfenova
- V. N. Sukachev Institute of Forest, FRC KSC, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
| | - Minjee Park
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul, South Korea
| | - Marc Parren
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, The Netherlands
| | | | - Pablo L Peri
- Instituto Nacional de Tecnología Agropecuaria (INTA), Universidad Nacional de la Patagonia Austral (UNPA), Consejo Nacional de Investigaciones Científicas y Tecnicas (CONICET), Río Gallegos, Argentina
| | - Sebastian Pfautsch
- School of Social Sciences (Urban Studies), Western Sydney University, Penrith, New South Wales, Australia
| | | | - Nicolas Picard
- Forestry Department, Food and Agriculture Organization of the United Nations, Rome, Italy
| | | | - Daniel Piotto
- Laboratório de Dendrologia e Silvicultura Tropical, Centro de Formação em Ciências Agroflorestais, Universidade Federal do Sul da Bahia, Itabuna, Brazil
| | | | - Irina Polo
- Jardín Botánico de Medellín, Medellin, Colombia
| | - Lourens Poorter
- Wageningen University and Research, Wageningen, The Netherlands
| | | | - Hans Pretzsch
- Chair for Forest Growth and Yield Science, TUM School for Life Sciences, Technical University of Munich, Munich, Germany
| | | | - Zorayda Restrepo-Correa
- Servicios Ecosistémicos y Cambio Climático (SECC), Fundación Con Vida & Corporación COL-TREE, Medellín, Colombia
| | - Mirco Rodeghiero
- Research and Innovation Center, Fondazione Edmund Mach, San Michele All'adige, Italy
- Centro Agricoltura, Alimenti, Ambiente, University of Trento, San Michele All'adige, Italy
| | - Samir G Rolim
- Laboratório de Dendrologia e Silvicultura Tropical, Centro de Formação em Ciências Agroflorestais, Universidade Federal do Sul da Bahia, Itabuna, Brazil
| | - Anand Roopsind
- Department of Biological Sciences, Boise State University, Boise, ID, USA
| | - Francesco Rovero
- Department of Biology, University of Florence, Florence, Italy
- Tropical Biodiversity, MUSE-Museo delle Scienze, Trento, Italy
| | | | - Purabi Saikia
- Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
| | - Christian Salas-Eljatib
- Centro de Modelación y Monitoreo de Ecosistemas, Universidad Mayor, Santiago, Chile
- Vicerrectoria de Investigacion y Postgrado, Universidad de La Frontera, Temuco, Chile
- Depto. de Silvicultura y Conservacion de la Naturaleza, Universidad de Chile, Temuco, Chile
| | | | - Peter Schall
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Göttingen, Germany
| | - Dmitry Schepaschenko
- Biodiversity and Natural Resources Program, International Institute for Applied Systems Analysis (IIASA), Laxenburg, Austria
- V. N. Sukachev Institute of Forest, FRC KSC, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
- Siberian Federal University, Krasnoyarsk Russian Federation, Krasnoyarsk, Russia
| | | | - Bernhard Schmid
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Zurich, Switzerland
| | | | - Eric B Searle
- Centre for Forest Research, Université du Québec à Montréal, Montreal, Quebec, Canada
| | - Vladimír Seben
- National Forest Centre, Forest Research Institute Zvolen, Zvolen, Slovakia
| | - Josep M Serra-Diaz
- Université de Lorraine, AgroParisTech, INRAE, Silva, Nancy, France
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark
| | - Douglas Sheil
- Forest Ecology and Forest Management, Wageningen University and Research, Wageningen, The Netherlands
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway
| | - Anatoly Z Shvidenko
- Biodiversity and Natural Resources Program, International Institute for Applied Systems Analysis (IIASA), Laxenburg, Austria
| | | | - Marcos Silveira
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, Acre, Brazil
| | - James Singh
- Guyana Forestry Commission, Georgetown, France
| | - Plinio Sist
- Cirad, UPR Forêts et Sociétés, University of Montpellier, Montpellier, France
| | - Ferry Slik
- Environmental and Life Sciences, Faculty of Science, Universiti Brunei Darussalam, Bandar Seri Begawan, Brunei
| | - Bonaventure Sonké
- Plant Systematic and Ecology Laboratory, Department of Biology, Higher Teachers' Training College, University of Yaoundé I, Yaoundé, Cameroon
| | - Alexandre F Souza
- Departamento de Ecologia, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil
| | | | | | - Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark
- Section for Ecoinformatics & Biodiversity, Department of Biology, Aarhus University, Aarhus, Denmark
| | - Miroslav Svoboda
- Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, Prague, Czech Republic
| | | | | | - Nadja Tchebakova
- V. N. Sukachev Institute of Forest, FRC KSC, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
| | - Hans Ter Steege
- Naturalis Biodiversity Center, Leiden, The Netherlands
- Quantitative Biodiversity Dynamics, Betafaculty, Utrecht University, Utrecht, The Netherlands
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development (IIC), Georgetown, Guyana
| | - Elena Tikhonova
- Center for Forest Ecology and Productivity, Russian Academy of Sciences, Moscow, Russia
| | - Peter M Umunay
- School of Forestry and Environmental Studies, Yale University, New Haven, CT, USA
| | - Vladimir A Usoltsev
- Botanical Garden of Ural Branch of Russian Academy of Sciences, Ural State Forest Engineering University, Yekaterinburg, Russia
| | | | | | - Fons van der Plas
- Plant Ecology and Nature Conservation Group, Wageningen University, Wageningen, The Netherlands
| | - Tran Van Do
- Silviculture Research Institute, Vietnamese Academy of Forest Sciences, Hanoi, Vietnam
| | | | | | - Hans Verbeeck
- CAVElab-Computational and Applied Vegetation Ecology, Department of Environment, Ghent University, Ghent, Belgium
| | - Helder Viana
- Centre for the Research and Technology of Agro-Environmental and Biological Sciences, CITAB, University of Trás-os-Montes and Alto Douro, UTAD, Viseu, Portugal
- Department of Ecology and Sustainable Agriculture, Agricultural High School, Polytechnic Institute of Viseu, Viseu, Portugal
| | - Alexander C Vibrans
- Natural Science Department, Universidade Regional de Blumenau, Blumenau, Brazil
- Department of Forest Engineering Universidade Regional de Blumenau, Blumenau, Brazil
| | - Simone Vieira
- Environmental Studies and Research Center, University of Campinas, UNICAMP, Campinas, Brazil
| | - Klaus von Gadow
- Department of Forest and Wood Science, University of Stellenbosch, Stellenbosch, South Africa
| | - Hua-Feng Wang
- Key Laboratory of Tropical Biological Resources, Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, China
| | - James V Watson
- Division of Forestry and Natural Resources, West Virginia University, Morgantown, WV, USA
| | | | - Susan K Wiser
- Manaaki Whenua-Landcare Research, Lincoln, New Zealand
| | - Florian Wittmann
- Department of Wetland Ecology, Institute for Geography and Geoecology, Karlsruhe Institute for Technology, Karlsruhe, Germany
| | | | - Verginia Wortel
- Centre for Agricultural Research in Suriname (CELOS), Paramaribo, Suriname
| | - Roderik Zagt
- Tropenbos International, Wageningen, The Netherlands
| | | | - Chunyu Zhang
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration, Beijing Forestry University, Beijing, China
| | - Xiuhai Zhao
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration, Beijing Forestry University, Beijing, China
| | - Mo Zhou
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
| | - Zhi-Xin Zhu
- Key Laboratory of Tropical Biological Resources, Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, China
| | - Irie C Zo-Bi
- Department of Forestry and Environment, National Polytechnic Institute (INP-HB), Yamoussoukro, Côte d'Ivoire
| | - Daniel S Maynard
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
- Department of Genetics, Evolution, and Environment, University College London, London, UK
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6
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Delavaux CS, Crowther TW, Zohner CM, Robmann NM, Lauber T, van den Hoogen J, Kuebbing S, Liang J, de-Miguel S, Nabuurs GJ, Reich PB, Abegg M, Adou Yao YC, Alberti G, Almeyda Zambrano AM, Alvarado BV, Alvarez-Dávila E, Alvarez-Loayza P, Alves LF, Ammer C, Antón-Fernández C, Araujo-Murakami A, Arroyo L, Avitabile V, Aymard GA, Baker TR, Bałazy R, Banki O, Barroso JG, Bastian ML, Bastin JF, Birigazzi L, Birnbaum P, Bitariho R, Boeckx P, Bongers F, Bouriaud O, Brancalion PHS, Brandl S, Brienen R, Broadbent EN, Bruelheide H, Bussotti F, Gatti RC, César RG, Cesljar G, Chazdon R, Chen HYH, Chisholm C, Cho H, Cienciala E, Clark C, Clark D, Colletta GD, Coomes DA, Cornejo Valverde F, Corral-Rivas JJ, Crim PM, Cumming JR, Dayanandan S, de Gasper AL, Decuyper M, Derroire G, DeVries B, Djordjevic I, Dolezal J, Dourdain A, Engone Obiang NL, Enquist BJ, Eyre TJ, Fandohan AB, Fayle TM, Feldpausch TR, Ferreira LV, Fischer M, Fletcher C, Frizzera L, Gamarra JGP, Gianelle D, Glick HB, Harris DJ, Hector A, Hemp A, Hengeveld G, Hérault B, Herbohn JL, Herold M, Hillers A, Honorio Coronado EN, Hui C, Ibanez TT, Amaral I, Imai N, Jagodziński AM, Jaroszewicz B, Johannsen VK, Joly CA, Jucker T, Jung I, Karminov V, Kartawinata K, Kearsley E, Kenfack D, Kennard DK, Kepfer-Rojas S, Keppel G, Khan ML, Killeen TJ, Kim HS, Kitayama K, Köhl M, Korjus H, Kraxner F, Laarmann D, Lang M, Lewis SL, Lu H, Lukina NV, Maitner BS, Malhi Y, Marcon E, Marimon BS, Marimon-Junior BH, Marshall AR, Martin EH, Martynenko O, Meave JA, Melo-Cruz O, Mendoza C, Merow C, Mendoza AM, Moreno VS, Mukul SA, Mundhenk P, Nava-Miranda MG, Neill D, Neldner VJ, Nevenic RV, Ngugi MR, Niklaus PA, Oleksyn J, Ontikov P, Ortiz-Malavasi E, Pan Y, Paquette A, Parada-Gutierrez A, Parfenova EI, Park M, Parren M, Parthasarathy N, Peri PL, Pfautsch S, Phillips OL, Picard N, Piedade MTTF, Piotto D, Pitman NCA, Polo I, Poorter L, Poulsen AD, Pretzsch H, Ramirez Arevalo F, Restrepo-Correa Z, Rodeghiero M, Rolim SG, Roopsind A, Rovero F, Rutishauser E, Saikia P, Salas-Eljatib C, Saner P, Schall P, Schepaschenko D, Scherer-Lorenzen M, Schmid B, Schöngart J, Searle EB, Seben V, Serra-Diaz JM, Sheil D, Shvidenko AZ, Silva-Espejo JE, Silveira M, Singh J, Sist P, Slik F, Sonké B, Souza AF, Miscicki S, Stereńczak KJ, Svenning JC, Svoboda M, Swanepoel B, Targhetta N, Tchebakova N, Ter Steege H, Thomas R, Tikhonova E, Umunay PM, Usoltsev VA, Valencia R, Valladares F, van der Plas F, Do TV, van Nuland ME, Vasquez RM, Verbeeck H, Viana H, Vibrans AC, Vieira S, von Gadow K, Wang HF, Watson JV, Werner GDA, Wiser SK, Wittmann F, Woell H, Wortel V, Zagt R, Zawiła-Niedźwiecki T, Zhang C, Zhao X, Zhou M, Zhu ZX, Zo-Bi IC, Maynard DS. Native diversity buffers against severity of non-native tree invasions. Nature 2023; 621:773-781. [PMID: 37612513 PMCID: PMC10533391 DOI: 10.1038/s41586-023-06440-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 07/14/2023] [Indexed: 08/25/2023]
Abstract
Determining the drivers of non-native plant invasions is critical for managing native ecosystems and limiting the spread of invasive species1,2. Tree invasions in particular have been relatively overlooked, even though they have the potential to transform ecosystems and economies3,4. Here, leveraging global tree databases5-7, we explore how the phylogenetic and functional diversity of native tree communities, human pressure and the environment influence the establishment of non-native tree species and the subsequent invasion severity. We find that anthropogenic factors are key to predicting whether a location is invaded, but that invasion severity is underpinned by native diversity, with higher diversity predicting lower invasion severity. Temperature and precipitation emerge as strong predictors of invasion strategy, with non-native species invading successfully when they are similar to the native community in cold or dry extremes. Yet, despite the influence of these ecological forces in determining invasion strategy, we find evidence that these patterns can be obscured by human activity, with lower ecological signal in areas with higher proximity to shipping ports. Our global perspective of non-native tree invasion highlights that human drivers influence non-native tree presence, and that native phylogenetic and functional diversity have a critical role in the establishment and spread of subsequent invasions.
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Affiliation(s)
- Camille S Delavaux
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland.
| | - Thomas W Crowther
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Constantin M Zohner
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Niamh M Robmann
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Thomas Lauber
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Johan van den Hoogen
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Sara Kuebbing
- The Forest School at The Yale School of the Environment, Yale University, New Haven, CT, USA
| | - Jingjing Liang
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
| | - Sergio de-Miguel
- Department of Crop and Forest Sciences, University of Lleida, Lleida, Spain
- Joint Research Unit CTFC-AGROTECNIO-CERCA, Solsona, Spain
| | | | - Peter B Reich
- Department of Forest Resources, University of Minnesota, St Paul, MN, USA
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
- Institute for Global Change Biology, and School for Environment and Sustainability, University of Michigan, Ann Arbor, MI, USA
| | - Meinrad Abegg
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Birmensdorf, Switzerland
| | - Yves C Adou Yao
- UFR Biosciences, University Félix Houphouët-Boigny, Abidjan, Côte d'Ivoire
| | - Giorgio Alberti
- Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, Udine, Italy
- Faculty of Science and Technology, Free University of Bolzano, Bolzano, Italy
| | - Angelica M Almeyda Zambrano
- Spatial Ecology and Conservation Laboratory, Department of Tourism, Recreation and Sport Management, University of Florida, Gainesville, FL, USA
| | | | | | | | - Luciana F Alves
- Center for Tropical Research, Institute of the Environment and Sustainability, UCLA, Los Angeles, CA, USA
| | - Christian Ammer
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Göttingen, Germany
| | - Clara Antón-Fernández
- Division of Forest and Forest Resources, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | | | - Luzmila Arroyo
- Museo de Historia Natural Noel kempff Mercado, Santa Cruz, Bolivia
| | | | - Gerardo A Aymard
- UNELLEZ-Guanare, Programa de Ciencias del Agro y el Mar, Herbario Universitario (PORT), Portuguesa, Venezuela
- Compensation International S. A. Ci Progress-GreenLife, Bogotá, Colombia
| | | | - Radomir Bałazy
- Department of Geomatics, Forest Research Institute, Raszyn, Poland
| | - Olaf Banki
- Naturalis Biodiversity Center, Leiden, The Netherlands
| | - Jorcely G Barroso
- Centro Multidisciplinar, Universidade Federal do Acre, Rio Branco, Brazil
| | - Meredith L Bastian
- Proceedings of the National Academy of Sciences, Washington, DC, USA
- Department of Evolutionary Anthropology, Duke University, Durham, NC, USA
| | - Jean-Francois Bastin
- TERRA Teach and Research Centre, Gembloux Agro Bio-Tech, University of Liege, Liege, Belgium
| | - Luca Birigazzi
- United Nation Framework Convention on Climate Change, Bonn, Germany
| | - Philippe Birnbaum
- Institut Agronomique néo-Calédonien (IAC), Nouméa, New Caledonia
- AMAP, University of Montpellier, Montpellier, France
- CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Robert Bitariho
- Institute of Tropical Forest Conservation, Mbarara University of Sciences and Technology, Mbarara, Uganda
| | - Pascal Boeckx
- Isotope Bioscience Laboratory-ISOFYS, Ghent University, Ghent, Belgium
| | - Frans Bongers
- Wageningen University and Research, Wageningen, The Netherlands
| | - Olivier Bouriaud
- Integrated Center for Research, Development and Innovation in Advanced Materials, Nanotechnologies, and Distributed Systems for Fabrication and Control (MANSiD), Stefan cel Mare University of Suceava, Suceava, Romania
| | - Pedro H S Brancalion
- Department of Forest Sciences, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil
| | | | - Roel Brienen
- School of Geography, University of Leeds, Leeds, UK
| | - Eben N Broadbent
- Spatial Ecology and Conservation Laboratory, School of Forest Resources and Conservation, University of Florida, Gainesville, FL, USA
| | - Helge Bruelheide
- Institute of Biology, Geobotany and Botanical Garden, Martin Luther University Halle-Wittenberg, Halle-Wittenberg, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Filippo Bussotti
- Department of Agriculture, Food, Environment and Forest (DAGRI), University of Firenze, Florence, Italy
| | - Roberto Cazzolla Gatti
- Department of Biological, Geological, and Environmental Sciences, University of Bologna, Bologna, Italy
| | - Ricardo G César
- Department of Forest Sciences, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil
| | - Goran Cesljar
- Department of Spatial Regulation, GIS and Forest Policy, Institute of Forestry, Belgrade, Serbia
| | - Robin Chazdon
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
| | - Han Y H Chen
- Faculty of Natural Resources Management, Lakehead University, Thunder Bay, Ontario, Canada
| | - Chelsea Chisholm
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
| | - Hyunkook Cho
- Division of Forest Resources Information, Korea Forest Promotion Institute, Seoul, South Korea
| | - Emil Cienciala
- IFER-Institute of Forest Ecosystem Research, Jilove u Prahy, Czech Republic
- Global Change Research Institute CAS, Brno, Czech Republic
| | - Connie Clark
- Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - David Clark
- Department of Biology, University of Missouri-St Louis, St Louis, MO, USA
| | - Gabriel D Colletta
- Programa de Pós-graduação em Biologia Vegetal, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil
| | - David A Coomes
- Department of Plant Sciences and Conservation Research Institute, University of Cambridge, Cambridge, UK
| | | | - José J Corral-Rivas
- Facultad de Ciencias Forestales y Ambientales, Universidad Juárez del Estado de Durango, Durango, Mexico
| | - Philip M Crim
- Department of Biology, West Virginia University, Morgantown, WV, USA
- Department of Physical and Biological Sciences, The College of Saint Rose, Albany, NY, USA
| | | | - Selvadurai Dayanandan
- Biology Department, Centre for Structural and Functional Genomics, Concordia University, Montreal, Quebec, Canada
| | - André L de Gasper
- Natural Science Department, Universidade Regional de Blumenau, Blumenau, Brazil
| | - Mathieu Decuyper
- Wageningen University and Research, Wageningen, The Netherlands
- World Agroforestry (ICRAF), Nairobi, Kenya
| | - Géraldine Derroire
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, INRAE), Université des Antilles, Université de la Guyane, Campus Agronomique, Kourou, France
| | - Ben DeVries
- Department of Geographical Sciences, University of Maryland, College Park, MD, USA
| | | | - Jiri Dolezal
- Institute of Botany, The Czech Academy of Sciences, Třeboň, Czech Republic
- Department of Botany, Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic
| | - Aurélie Dourdain
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, INRAE), Université des Antilles, Université de la Guyane, Campus Agronomique, Kourou, France
| | | | - Brian J Enquist
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA
- The Santa Fe Institute, Santa Fe, NM, USA
| | - Teresa J Eyre
- Queensland Herbarium, Department of Environment and Science, Toowong, Queensland, Australia
| | | | - Tom M Fayle
- School of Biological and Behavioural Sciences, Queen Mary University of London, London, UK
- Biology Centre of the Czech Academy of Sciences, Institute of Entomology, Ceske Budejovice, Czech Republic
| | - Ted R Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | - Leandro V Ferreira
- Museu Paraense Emílio Goeldi. Coordenação de Ciências da Terra e Ecologia, Belém, Pará, Brazil
| | - Markus Fischer
- Institute of Plant Sciences, University of Bern, Bern, Switzerland
| | | | - Lorenzo Frizzera
- Research and Innovation Center, Fondazione Edmund Mach, San Michele All'adige, Italy
| | - Javier G P Gamarra
- Forestry Division, Food and Agriculture Organization of the United Nations, Rome, Italy
| | - Damiano Gianelle
- Research and Innovation Center, Fondazione Edmund Mach, San Michele All'adige, Italy
| | | | | | - Andrew Hector
- Department of Plant Sciences, University of Oxford, Oxford, UK
| | - Andreas Hemp
- Department of Plant Systematics, University of Bayreuth, Bayreuth, Germany
| | | | - Bruno Hérault
- Cirad, UPR Forêts et Sociétés, University of Montpellier, Montpellier, France
- Department of Forestry and Environment, National Polytechnic Institute (INP-HB), Yamoussoukro, Côte d'Ivoire
| | - John L Herbohn
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
- Tropical Forests and People Research Centre, University of the Sunshine Coast, Maroochydore, Queensland, Australia
| | - Martin Herold
- Wageningen University and Research, Wageningen, The Netherlands
| | - Annika Hillers
- Centre for Conservation Science, The Royal Society for the Protection of Birds, Sandy, UK
- Wild Chimpanzee Foundation, Liberia Office, Monrovia, Liberia
| | | | - Cang Hui
- Centre for Invasion Biology, Department of Mathematical Sciences, Stellenbosch University, Stellenbosch, South Africa
- Theoretical Ecology Unit, African Institute for Mathematical Sciences, Cape Town, South Africa
| | - Thomas T Ibanez
- AMAP, University of Montpellier, Montpellier, France
- CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Iêda Amaral
- National Institute of Amazonian Research, Manaus, Brazil
| | - Nobuo Imai
- Department of Forest Science, Tokyo University of Agriculture, Tokyo, Japan
| | - Andrzej M Jagodziński
- Institute of Dendrology, Polish Academy of Sciences, Kórnik, Poland
- Poznań University of Life Sciences, Department of Game Management and Forest Protection, Poznań, Poland
| | - Bogdan Jaroszewicz
- Faculty of Biology, Białowieża Geobotanical Station, University of Warsaw, Białowieża, Poland
| | - Vivian Kvist Johannsen
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Carlos A Joly
- Department of Plant Biology, Institute of Biology, University of Campinas, UNICAMP, Campinas, Brazil
| | - Tommaso Jucker
- School of Biological Sciences, University of Bristol, Bristol, UK
| | - Ilbin Jung
- Division of Forest Resources Information, Korea Forest Promotion Institute, Seoul, South Korea
| | - Viktor Karminov
- Forestry Faculty, Bauman Moscow State Technical University, Mytischi, Russia
| | | | - Elizabeth Kearsley
- CAVElab-Computational and Applied Vegetation Ecology, Department of Environment, Ghent University, Ghent, Belgium
| | - David Kenfack
- CTFS-ForestGEO, Smithsonian Tropical Research Institute, Balboa, Panama
| | - Deborah K Kennard
- Department of Physical and Environmental Sciences, Colorado Mesa University, Grand Junction, CO, USA
| | - Sebastian Kepfer-Rojas
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Gunnar Keppel
- UniSA STEM and Future Industries Institute, University of South Australia, Adelaide, South Australia, Australia
| | - Mohammed Latif Khan
- Department of Botany, Dr Harisingh Gour Vishwavidyalaya (A Central University), Sagar, India
| | | | - Hyun Seok Kim
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul, South Korea
- Interdisciplinary Program in Agricultural and Forest Meteorology, Seoul National University, Seoul, South Korea
- National Center for Agro Meteorology, Seoul, South Korea
- Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, South Korea
| | | | - Michael Köhl
- Institute for World Forestry, University of Hamburg, Hamburg, Germany
| | - Henn Korjus
- Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu, Estonia
| | - Florian Kraxner
- Biodiversity and Natural Resources Program, International Institute for Applied Systems Analysis (IIASA), Laxenburg, Austria
| | - Diana Laarmann
- Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu, Estonia
| | - Mait Lang
- Institute of Forestry and Engineering, Estonian University of Life Sciences, Tartu, Estonia
| | - Simon L Lewis
- School of Geography, University of Leeds, Leeds, UK
- Department of Geography, University College London, London, UK
| | - Huicui Lu
- Faculty of Forestry, Qingdao Agricultural University, Qingdao, China
| | - Natalia V Lukina
- Center for Forest Ecology and Productivity, Russian Academy of Sciences, Moscow, Russia
| | - Brian S Maitner
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Eric Marcon
- AgroParisTech, UMR-AMAP, Cirad, CNRS, INRA, IRD, Université de Montpellier, Montpellier, France
| | | | - Ben Hur Marimon-Junior
- Departamento de Ciências Biológicas, Universidade do Estado de Mato Grosso, Nova Xavantina, Brazil
| | - Andrew R Marshall
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
- Department of Environment and Geography, University of York, York, UK
- Flamingo Land, Malton, UK
| | - Emanuel H Martin
- Department of Wildlife Management, College of African Wildlife Management, Mweka, Tanzania
| | - Olga Martynenko
- Forestry Faculty, Bauman Moscow State Technical University, Mytischi, Russia
| | - Jorge A Meave
- Departamento de Ecología y Recursos Naturales, Facultad de Ciencias, Universidad Nacional Autónoma de México, Mexico City, Mexico
| | | | - Casimiro Mendoza
- Colegio de Profesionales Forestales de Cochabamba, Cochabamba, Bolivia
| | - Cory Merow
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
| | - Abel Monteagudo Mendoza
- Jardín Botánico de Missouri, Pasco, Peru
- Universidad Nacional de San Antonio Abad del Cusco, Cusco, Peru
| | - Vanessa S Moreno
- Department of Forest Sciences, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil
| | - Sharif A Mukul
- Forest Research Institute, University of the Sunshine Coast, Sippy Downs, Queensland, Australia
- Department of Environment and Development Studies, United International University, Dhaka, Bangladesh
| | - Philip Mundhenk
- Institute for World Forestry, University of Hamburg, Hamburg, Germany
| | - María Guadalupe Nava-Miranda
- Laboratorio de geomática, Instituto de Silvicultura e Industria de la Madera, Universidad Juárez del Estado de Durango, Durango, Mexico
- Programa de doctorado en Ingeniería para el desarrollo rural y civil, Escuela de Doctorado Internacional de la Universidad de Santiago de Compostela, Santiago de Compostela, Spain
- Department of Environment and Development Studies, United International University, Dhaka, Bangladesh
| | - David Neill
- Universidad Estatal Amazónica, Puyo, Pastaza, Ecuador
| | - Victor J Neldner
- Queensland Herbarium, Department of Environment and Science, Toowong, Queensland, Australia
| | | | - Michael R Ngugi
- Queensland Herbarium, Department of Environment and Science, Toowong, Queensland, Australia
| | - Pascal A Niklaus
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Zurich, Switzerland
| | - Jacek Oleksyn
- Institute of Dendrology, Polish Academy of Sciences, Kórnik, Poland
| | - Petr Ontikov
- Forestry Faculty, Bauman Moscow State Technical University, Mytischi, Russia
| | | | - Yude Pan
- Climate, Fire, and Carbon Cycle Sciences, USDA Forest Service, Durham, NC, USA
| | - Alain Paquette
- Centre for Forest Research, Université du Québec à Montréal, Montreal, Quebec, Canada
| | | | - Elena I Parfenova
- V. N. Sukachev Institute of Forest, FRC KSC, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
| | - Minjee Park
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul, South Korea
| | - Marc Parren
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, The Netherlands
| | | | - Pablo L Peri
- Instituto Nacional de Tecnología Agropecuaria (INTA), Universidad Nacional de la Patagonia Austral (UNPA), Consejo Nacional de Investigaciones Científicas y Tecnicas (CONICET), Río Gallegos, Argentina
| | - Sebastian Pfautsch
- School of Social Sciences (Urban Studies), Western Sydney University, Penrith, New South Wales, Australia
| | | | - Nicolas Picard
- Forestry Department, Food and Agriculture Organization of the United Nations, Rome, Italy
| | | | - Daniel Piotto
- Laboratório de Dendrologia e Silvicultura Tropical, Centro de Formação em Ciências Agroflorestais, Universidade Federal do Sul da Bahia, Itabuna, Brazil
| | | | - Irina Polo
- Jardín Botánico de Medellín, Medellin, Colombia
| | - Lourens Poorter
- Wageningen University and Research, Wageningen, The Netherlands
| | | | - Hans Pretzsch
- Chair for Forest Growth and Yield Science, TUM School for Life Sciences, Technical University of Munich, Munich, Germany
| | | | - Zorayda Restrepo-Correa
- Servicios Ecosistémicos y Cambio Climático (SECC), Fundación Con Vida & Corporación COL-TREE, Medellín, Colombia
| | - Mirco Rodeghiero
- Research and Innovation Center, Fondazione Edmund Mach, San Michele All'adige, Italy
- Centro Agricoltura, Alimenti, Ambiente, University of Trento, San Michele All'adige, Italy
| | - Samir G Rolim
- Laboratório de Dendrologia e Silvicultura Tropical, Centro de Formação em Ciências Agroflorestais, Universidade Federal do Sul da Bahia, Itabuna, Brazil
| | - Anand Roopsind
- Department of Biological Sciences, Boise State University, Boise, ID, USA
| | - Francesco Rovero
- Department of Biology, University of Florence, Florence, Italy
- Tropical Biodiversity, MUSE-Museo delle Scienze, Trento, Italy
| | | | - Purabi Saikia
- Department of Environmental Sciences, Central University of Jharkhand, Ranchi, Jharkhand, India
| | - Christian Salas-Eljatib
- Centro de Modelación y Monitoreo de Ecosistemas, Universidad Mayor, Santiago, Chile
- Vicerrectoria de Investigacion y Postgrado, Universidad de La Frontera, Temuco, Chile
- Depto. de Silvicultura y Conservacion de la Naturaleza, Universidad de Chile, Temuco, Chile
| | | | - Peter Schall
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Göttingen, Germany
| | - Dmitry Schepaschenko
- Biodiversity and Natural Resources Program, International Institute for Applied Systems Analysis (IIASA), Laxenburg, Austria
- V. N. Sukachev Institute of Forest, FRC KSC, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
- Siberian Federal University, Krasnoyarsk Russian Federation, Krasnoyarsk, Russia
| | | | - Bernhard Schmid
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Zurich, Switzerland
| | | | - Eric B Searle
- Centre for Forest Research, Université du Québec à Montréal, Montreal, Quebec, Canada
| | - Vladimír Seben
- National Forest Centre, Forest Research Institute Zvolen, Zvolen, Slovakia
| | - Josep M Serra-Diaz
- Université de Lorraine, AgroParisTech, INRAE, Silva, Nancy, France
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark
| | - Douglas Sheil
- Forest Ecology and Forest Management, Wageningen University and Research, Wageningen, The Netherlands
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway
| | - Anatoly Z Shvidenko
- Biodiversity and Natural Resources Program, International Institute for Applied Systems Analysis (IIASA), Laxenburg, Austria
| | | | - Marcos Silveira
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, Acre, Brazil
| | - James Singh
- Guyana Forestry Commission, Georgetown, France
| | - Plinio Sist
- Cirad, UPR Forêts et Sociétés, University of Montpellier, Montpellier, France
| | - Ferry Slik
- Environmental and Life Sciences, Faculty of Science, Universiti Brunei Darussalam, Bandar Seri Begawan, Brunei
| | - Bonaventure Sonké
- Plant Systematic and Ecology Laboratory, Department of Biology, Higher Teachers' Training College, University of Yaoundé I, Yaoundé, Cameroon
| | - Alexandre F Souza
- Departamento de Ecologia, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil
| | | | | | - Jens-Christian Svenning
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO) and Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Aarhus, Denmark
- Section for Ecoinformatics & Biodiversity, Department of Biology, Aarhus University, Aarhus, Denmark
| | - Miroslav Svoboda
- Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, Prague, Czech Republic
| | | | | | - Nadja Tchebakova
- V. N. Sukachev Institute of Forest, FRC KSC, Siberian Branch of the Russian Academy of Sciences, Krasnoyarsk, Russia
| | - Hans Ter Steege
- Naturalis Biodiversity Center, Leiden, The Netherlands
- Quantitative Biodiversity Dynamics, Betafaculty, Utrecht University, Utrecht, The Netherlands
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development (IIC), Georgetown, Guyana
| | - Elena Tikhonova
- Center for Forest Ecology and Productivity, Russian Academy of Sciences, Moscow, Russia
| | - Peter M Umunay
- School of Forestry and Environmental Studies, Yale University, New Haven, CT, USA
| | - Vladimir A Usoltsev
- Botanical Garden of Ural Branch of Russian Academy of Sciences, Ural State Forest Engineering University, Yekaterinburg, Russia
| | | | | | - Fons van der Plas
- Plant Ecology and Nature Conservation Group, Wageningen University, Wageningen, The Netherlands
| | - Tran Van Do
- Silviculture Research Institute, Vietnamese Academy of Forest Sciences, Hanoi, Vietnam
| | | | | | - Hans Verbeeck
- CAVElab-Computational and Applied Vegetation Ecology, Department of Environment, Ghent University, Ghent, Belgium
| | - Helder Viana
- Centre for the Research and Technology of Agro-Environmental and Biological Sciences, CITAB, University of Trás-os-Montes and Alto Douro, UTAD, Viseu, Portugal
- Department of Ecology and Sustainable Agriculture, Agricultural High School, Polytechnic Institute of Viseu, Viseu, Portugal
| | - Alexander C Vibrans
- Natural Science Department, Universidade Regional de Blumenau, Blumenau, Brazil
- Department of Forest Engineering Universidade Regional de Blumenau, Blumenau, Brazil
| | - Simone Vieira
- Environmental Studies and Research Center, University of Campinas, UNICAMP, Campinas, Brazil
| | - Klaus von Gadow
- Department of Forest and Wood Science, University of Stellenbosch, Stellenbosch, South Africa
| | - Hua-Feng Wang
- Key Laboratory of Tropical Biological Resources, Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, China
| | - James V Watson
- Division of Forestry and Natural Resources, West Virginia University, Morgantown, WV, USA
| | | | - Susan K Wiser
- Manaaki Whenua-Landcare Research, Lincoln, New Zealand
| | - Florian Wittmann
- Department of Wetland Ecology, Institute for Geography and Geoecology, Karlsruhe Institute for Technology, Karlsruhe, Germany
| | | | - Verginia Wortel
- Centre for Agricultural Research in Suriname (CELOS), Paramaribo, Suriname
| | - Roderik Zagt
- Tropenbos International, Wageningen, The Netherlands
| | | | - Chunyu Zhang
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration, Beijing Forestry University, Beijing, China
| | - Xiuhai Zhao
- Research Center of Forest Management Engineering of State Forestry and Grassland Administration, Beijing Forestry University, Beijing, China
| | - Mo Zhou
- Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN, USA
| | - Zhi-Xin Zhu
- Key Laboratory of Tropical Biological Resources, Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, China
| | - Irie C Zo-Bi
- Department of Forestry and Environment, National Polytechnic Institute (INP-HB), Yamoussoukro, Côte d'Ivoire
| | - Daniel S Maynard
- Institute of Integrative Biology, ETH Zurich (Swiss Federal Institute of Technology), Zurich, Switzerland
- Department of Genetics, Evolution, and Environment, University College London, London, UK
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Delavaux CS, Bever JD. Evidence for the evolution of native plant response to mycorrhizal fungi in post-agricultural grasslands. Ecol Evol 2022; 12:e9097. [PMID: 35845364 PMCID: PMC9273508 DOI: 10.1002/ece3.9097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 04/11/2022] [Accepted: 06/11/2022] [Indexed: 11/10/2022] Open
Abstract
Plant-microbe interactions play an important role in structuring plant communities. Arbuscular mycorrhizal fungi (AMF) are particularly important. Nonetheless, increasing anthropogenic disturbance will lead to novel plant-AMF interactions, altering longstanding co-evolutionary trajectories between plants and their associated AMF. Although emerging work shows that plant-AMF response can evolve over relatively short time scales due to anthropogenic change, little work has evaluated how plant AMF response specificity may evolve due to novel plant-mycorrhizal interactions. Here, we examine changes in plant-AMF interactions in novel grassland systems by comparing the mycorrhizal response of plant populations from unplowed native prairies with populations from post-agricultural grasslands to inoculation with both native prairie AMF and non-native novel AMF. Across four plant species, we find support for evolution of differential responses to mycorrhizal inocula types, that is, mycorrhizal response specificity, consistent with expectations of local adaptation, with plants from native populations responding most to native AMF and plants from post-agricultural populations responding most to non-native AMF. We also find evidence of evolution of mycorrhizal response in two of the four plant species, as overall responsiveness to AMF changed from native to post-agricultural populations. Finally, across all four plant species, roots from native prairie populations had lower levels of mycorrhizal colonization than those of post-agricultural populations. Our results report on one of the first multispecies assessment of local adaptation to AMF. The consistency of the responses in our experiment among four species provides evidence that anthropogenic disturbance may have unintended impacts on native plant species' association with AMF, causing evolutionary change in the benefit native plant species gain from native symbioses.
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Affiliation(s)
- Camille S Delavaux
- Department of Ecology and Evolutionary Biology The University of Kansas Lawrence Kansas USA.,Kansas Biological Survey The University of Kansas Lawrence Kansas USA.,Department of Environmental Systems Science ETH Zurich Zurich Switzerland
| | - James D Bever
- Department of Ecology and Evolutionary Biology The University of Kansas Lawrence Kansas USA.,Kansas Biological Survey The University of Kansas Lawrence Kansas USA
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Delavaux CS, Ramos RJ, Sturmer SL, Bever JD. Environmental identification of arbuscular mycorrhizal fungi using the LSU rDNA gene region: an expanded database and improved pipeline. Mycorrhiza 2022; 32:145-153. [PMID: 35099622 PMCID: PMC8907093 DOI: 10.1007/s00572-022-01068-3] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 01/18/2022] [Indexed: 05/02/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF; Glomeromycota) are difficult to culture; therefore, establishing a robust amplicon-based approach to taxa identification is imperative to describe AMF diversity. Further, due to low and biased sampling of AMF taxa, molecular databases do not represent the breadth of AMF diversity, making database matching approaches suboptimal. Therefore, a full description of AMF diversity requires a tool to determine sequence-based placement in the Glomeromycota clade. Nonetheless, commonly used gene regions, including the SSU and ITS, do not enable reliable phylogenetic placement. Here, we present an improved database and pipeline for the phylogenetic determination of AMF using amplicons from the large subunit (LSU) rRNA gene. We improve our database and backbone tree by including additional outgroup sequences. We also improve an existing bioinformatics pipeline by aligning forward and reverse reads separately, using a universal alignment for all tree building, and implementing a BLAST screening prior to tree building to remove non-homologous sequences. Finally, we present a script to extract AMF belonging to 11 major families as well as an amplicon sequencing variant (ASV) version of our pipeline. We test the utility of the pipeline by testing the placement of known AMF, known non-AMF, and Acaulospora sp. spore sequences. This work represents the most comprehensive database and pipeline for phylogenetic placement of AMF LSU amplicon sequences within the Glomeromycota clade.
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Affiliation(s)
- Camille S Delavaux
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA.
- Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA.
- Department of Environmental Systems Science, ETH Zurich, Universitätstrasse 16, 8092, Zurich, Switzerland.
| | - Robert J Ramos
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA
- Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
| | - Sidney L Sturmer
- Departamento de Ciências Naturais, Universidade Regional de Blumenau, R. Antônio da Veiga 140Santa Catarina, Blumenau, 89030-903, Brazil
| | - James D Bever
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA
- Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
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9
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Delavaux CS, Weigelt P, Dawson W, Essl F, van Kleunen M, König C, Pergl J, Pyšek P, Stein A, Winter M, Taylor A, Schultz PA, Whittaker RJ, Kreft H, Bever JD. Mycorrhizal types influence island biogeography of plants. Commun Biol 2021; 4:1128. [PMID: 34561537 PMCID: PMC8463580 DOI: 10.1038/s42003-021-02649-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Accepted: 09/07/2021] [Indexed: 11/09/2022] Open
Abstract
Plant colonization of islands may be limited by the availability of symbionts, particularly arbuscular mycorrhizal (AM) fungi, which have limited dispersal ability compared to ectomycorrhizal and ericoid (EEM) as well as orchid mycorrhizal (ORC) fungi. We tested for such differential island colonization within contemporary angiosperm floras worldwide. We found evidence that AM plants experience a stronger mycorrhizal filter than other mycorrhizal or non-mycorrhizal (NM) plant species, with decreased proportions of native AM plant species on islands relative to mainlands. This effect intensified with island isolation, particularly for non-endemic plant species. The proportion of endemic AM plant species increased with island isolation, consistent with diversification filling niches left open by the mycorrhizal filter. We further found evidence of humans overcoming the initial mycorrhizal filter. Naturalized floras showed higher proportions of AM plant species than native floras, a pattern that increased with increasing isolation and land-use intensity. This work provides evidence that mycorrhizal fungal symbionts shape plant colonization of islands and subsequent diversification.
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Affiliation(s)
| | | | | | | | | | | | - Jan Pergl
- Czech Academy of Sciences, Průhonice, Czech Republic
| | - Petr Pyšek
- Czech Academy of Sciences, Průhonice, Czech Republic
| | - Anke Stein
- University of Konstanz, Konstanz, Germany
| | - Marten Winter
- German Centre for Integrative Biodiversity Research, Leipzig, Germany
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10
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Delavaux CS, Sturmer SL, Wagner MR, Schütte U, Morton JB, Bever JD. Utility of large subunit for environmental sequencing of arbuscular mycorrhizal fungi: a new reference database and pipeline. New Phytol 2021; 229:3048-3052. [PMID: 33190292 DOI: 10.1111/nph.17080] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Affiliation(s)
- Camille S Delavaux
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA
- Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
| | - Sidney L Sturmer
- Departamento de Ciências Naturais, Universidade Regional de Blumenau, R. Antônio da Veiga 140, Blumenau, Santa Catarina, 89030-903, Brazil
| | - Maggie R Wagner
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA
- Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
| | - Ursel Schütte
- Institute of Arctic Biology, University of Alaska Fairbanks, 2140 Koyukuk Drive, Fairbanks, AK, 99775, USA
| | - Joseph B Morton
- West Virginia University, 6 Alegre Pass, Santa Fe, Morgantown, NM, 87508, USA
| | - James D Bever
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA
- Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
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11
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Delavaux CS, Schemanski JL, House GL, Tipton AG, Sikes B, Bever JD. Root pathogen diversity and composition varies with climate in undisturbed grasslands, but less so in anthropogenically disturbed grasslands. ISME J 2020; 15:304-317. [PMID: 32958849 PMCID: PMC7852655 DOI: 10.1038/s41396-020-00783-z] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Revised: 08/25/2020] [Accepted: 09/10/2020] [Indexed: 02/07/2023]
Abstract
Soil-borne pathogens structure plant communities, shaping their diversity, and through these effects may mediate plant responses to climate change and disturbance. Little is known, however, about the environmental determinants of plant pathogen communities. Therefore, we explored the impact of climate gradients and anthropogenic disturbance on root-associated pathogens in grasslands. We examined the community structure of two pathogenic groups-fungal pathogens and oomycetes-in undisturbed and anthropogenically disturbed grasslands across a natural precipitation and temperature gradient in the Midwestern USA. In undisturbed grasslands, precipitation and temperature gradients were important predictors of pathogen community richness and composition. Oomycete richness increased with precipitation, while fungal pathogen richness depended on an interaction of precipitation and temperature, with precipitation increasing richness most with higher temperatures. Disturbance altered plant pathogen composition and precipitation and temperature had a reduced effect on pathogen richness and composition in disturbed grasslands. Because pathogens can mediate plant community diversity and structure, the sensitivity of pathogens to disturbance and climate suggests that degradation of the pathogen community may mediate loss, or limit restoration of, native plant diversity in disturbed grasslands, and may modify plant community response to climate change.
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Affiliation(s)
- Camille S Delavaux
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA. .,Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA.
| | - Josh L Schemanski
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA.,Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
| | - Geoffrey L House
- National Ecological Observatory Network, Boulder, CO, 80301, USA
| | - Alice G Tipton
- Department of Science, Technology, and Mathematics, Lincoln University, 821 Taylor Drive, 205 Daniel Hall, Jefferson City, MO, 65101, USA
| | - Benjamin Sikes
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA.,Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
| | - James D Bever
- Department of Ecology and Evolutionary Biology, The University of Kansas, 2041 Haworth Hall, 1200 Sunnyside Avenue, Lawrence, KS, 66045, USA.,Kansas Biological Survey, The University of Kansas, 106 Higuchi Hall, 2101 Constant Ave, Lawrence, KS, 66047, USA
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12
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Delavaux CS, Bever JD, Karppinen EM, Bainard LD. Keeping it cool: Soil sample cold pack storage and DNA shipment up to 1 month does not impact metabarcoding results. Ecol Evol 2020; 10:4652-4664. [PMID: 32551050 PMCID: PMC7297747 DOI: 10.1002/ece3.6219] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Revised: 02/17/2020] [Accepted: 03/06/2020] [Indexed: 01/30/2023] Open
Abstract
With the advances of sequencing tools, the fields of environmental microbiology and soil ecology have been transformed. Today, the unculturable majority of soil microbes can be sequenced. Although these tools give us tremendous power and open many doors to answer important questions, we must understand how sample processing may impact our results and interpretations. Here, we test the impacts of four soil storage methods on downstream amplicon metabarcoding and qPCR analyses for fungi and bacteria. We further investigate the impact of thaw time on extracted DNA to determine a safe length of time during which this can occur with minimal impact on study results. Overall, we find that storage using standard cold packs with subsequent storage at -20°C is little different than immediate storage in liquid nitrogen, suggesting that the historical and current method is adequate. We further find evidence that storage at room temperature or with aid of RNAlater can lead to changes in community composition and in the case of RNAlater, lower gene copies. We therefore advise against these storage methods for metabarcoding analyses. Finally, we show that over 1 month, DNA extract thaw time does not impact diversity or qPCR metrics. We hope that this work will help researchers working with soil bacteria and fungi make informed decisions about soil storage and transport to ensure repeatability and accuracy of results and interpretations.
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Affiliation(s)
- Camille S. Delavaux
- Department of Ecology and Evolutionary BiologyThe University of KansasLawrenceKSUSA
- Kansas Biological SurveyThe University of KansasLawrenceKSUSA
| | - James D. Bever
- Department of Ecology and Evolutionary BiologyThe University of KansasLawrenceKSUSA
- Kansas Biological SurveyThe University of KansasLawrenceKSUSA
| | - Erin M. Karppinen
- Swift Current Research and Development CentreAgriculture and Agri‐Food CanadaSwift CurrentSKCanada
| | - Luke D. Bainard
- Swift Current Research and Development CentreAgriculture and Agri‐Food CanadaSwift CurrentSKCanada
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13
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Dodds WK, Zeglin LH, Ramos RJ, Platt TG, Pandey A, Michaels T, Masigol M, Klompen AML, Kelly MC, Jumpponen A, Hauser E, Hansen PM, Greer MJ, Fattahi N, Delavaux CS, Connell RK, Billings S, Bever JD, Barua N, Agusto FB. Connections and Feedback: Aquatic, Plant, and Soil Microbiomes in Heterogeneous and Changing Environments. Bioscience 2020. [DOI: 10.1093/biosci/biaa046] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Plant, soil, and aquatic microbiomes interact, but scientists often study them independently. Integrating knowledge across these traditionally separate subdisciplines will generate better understanding of microbial ecological properties. Interactions among plant, soil, and aquatic microbiomes, as well as anthropogenic factors, influence important ecosystem processes, including greenhouse gas fluxes, crop production, nonnative species control, and nutrient flux from terrestrial to aquatic habitats. Terrestrial microbiomes influence nutrient retention and particle movement, thereby influencing the composition and functioning of aquatic microbiomes, which, themselves, govern water quality, and the potential for harmful algal blooms. Understanding how microbiomes drive links among terrestrial (plant and soil) and aquatic habitats will inform management decisions influencing ecosystem services. In the present article, we synthesize knowledge of microbiomes from traditionally disparate fields and how they mediate connections across physically separated systems. We identify knowledge gaps currently limiting our abilities to actualize microbiome management approaches for addressing environmental problems and optimize ecosystem services.
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Affiliation(s)
- Walter K Dodds
- Division of Biology, Kansas State University, Manhattan, Kansas
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14
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Delavaux CS, Weigelt P, Dawson W, Duchicela J, Essl F, van Kleunen M, König C, Pergl J, Pyšek P, Stein A, Winter M, Schultz P, Kreft H, Bever JD. Mycorrhizal fungi influence global plant biogeography. Nat Ecol Evol 2019; 3:424-429. [PMID: 30804519 DOI: 10.1038/s41559-019-0823-4] [Citation(s) in RCA: 54] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2018] [Accepted: 01/23/2019] [Indexed: 01/27/2023]
Abstract
Island biogeography has traditionally focused primarily on abiotic drivers of colonization, extinction and speciation. However, establishment on islands could also be limited by biotic drivers, such as the absence of symbionts. Most plants, for example, form symbioses with mycorrhizal fungi, whose limited dispersal to islands could act as a colonization filter for plants. We tested this hypothesis using global-scale analyses of ~1.4 million plant occurrences, including ~200,000 plant species across ~1,100 regions. We find evidence for a mycorrhizal filter (that is, the filtering out of mycorrhizal plants on islands), with mycorrhizal associations less common among native island plants than native mainland plants. Furthermore, the proportion of native mycorrhizal plants in island floras decreased with isolation, possibly as a consequence of a decline in symbiont establishment. We also show that mycorrhizal plants contribute disproportionately to the classic latitudinal gradient of plant species diversity, with the proportion of mycorrhizal plants being highest near the equator and decreasing towards the poles. Anthropogenic pressure and land use alter these plant biogeographical patterns. Naturalized floras show a greater proportion of mycorrhizal plant species on islands than in mainland regions, as expected from the anthropogenic co-introduction of plants with their symbionts to islands and anthropogenic disturbance of symbionts in mainland regions. We identify the mycorrhizal association as an overlooked driver of global plant biogeographical patterns with implications for contemporary island biogeography and our understanding of plant invasions.
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Affiliation(s)
- Camille S Delavaux
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, USA. .,Kansas Biological Survey, University of Kansas, Lawrence, KS, USA.
| | - Patrick Weigelt
- Department of Biodiversity, Macroecology and Biogeography, University of Goettingen, Göttingen, Germany
| | - Wayne Dawson
- Department of Biosciences, University of Durham, Durham, UK
| | - Jessica Duchicela
- Departamento de Ciencias de la Vida, Universidad de las Fuerzas Armadas ESPE, Sangolquí, Ecuador
| | - Franz Essl
- Division of Conservation Biology, Vegetation and Landscape Ecology, University of Vienna, Vienna, Austria
| | - Mark van Kleunen
- Department of Biology, University of Konstanz, Konstanz, Germany.,Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China
| | - Christian König
- Department of Biodiversity, Macroecology and Biogeography, University of Goettingen, Göttingen, Germany
| | - Jan Pergl
- Institute of Botany, Department of Invasion Ecology, Czech Academy of Sciences, Průhonice, Czech Republic
| | - Petr Pyšek
- Institute of Botany, Department of Invasion Ecology, Czech Academy of Sciences, Průhonice, Czech Republic.,Department of Ecology, Faculty of Science, Charles University, Prague, Czech Republic.,German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Anke Stein
- Department of Biology, University of Konstanz, Konstanz, Germany
| | - Marten Winter
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
| | - Peggy Schultz
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, USA
| | - Holger Kreft
- Department of Biodiversity, Macroecology and Biogeography, University of Goettingen, Göttingen, Germany.,Centre of Biodiversity and Sustainable Land Use, University of Goettingen, Göttingen, Germany
| | - James D Bever
- Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS, USA.,Kansas Biological Survey, University of Kansas, Lawrence, KS, USA
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15
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Delavaux CS, Smith‐Ramesh LM, Kuebbing SE. Beyond nutrients: a meta‐analysis of the diverse effects of arbuscular mycorrhizal fungi on plants and soils. Ecology 2017; 98:2111-2119. [DOI: 10.1002/ecy.1892] [Citation(s) in RCA: 122] [Impact Index Per Article: 17.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/20/2017] [Revised: 04/26/2017] [Accepted: 05/05/2017] [Indexed: 12/20/2022]
Affiliation(s)
- Camille S. Delavaux
- School of Forestry and Environmental Studies Yale University 195 Prospect Street New Haven Connecticut 06511 USA
- Ecology and Evolutionary Biology University of Kansas 2101 Constant Avenue Lawrence Kansas 66047 USA
| | - Lauren M. Smith‐Ramesh
- School of Forestry and Environmental Studies Yale University 195 Prospect Street New Haven Connecticut 06511 USA
- National Institute for Mathematical and Biological Synthesis University of Tennessee Knoxville Tennessee 37996 USA
| | - Sara E. Kuebbing
- School of Forestry and Environmental Studies Yale University 195 Prospect Street New Haven Connecticut 06511 USA
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Delavaux CS, Camenzind T, Homeier J, Jiménez-Paz R, Ashton M, Queenborough SA. Nutrient enrichment effects on mycorrhizal fungi in an Andean tropical montane Forest. Mycorrhiza 2017; 27:311-319. [PMID: 27924430 DOI: 10.1007/s00572-016-0749-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Accepted: 11/21/2016] [Indexed: 06/06/2023]
Abstract
Nitrogen (N) and phosphorus (P) deposition are increasing worldwide largely due to increased fertilizer use and fossil fuel combustion. Most work with N and P deposition in natural ecosystems has focused on temperate, highly industrialized, regions. Tropical regions are becoming more developed, releasing large amounts of these nutrients into the atmosphere. Nutrient enrichment in nutrient-poor systems such as tropical montane forest can represent a relatively large shift in nutrient availability, especially for sensitive microorganisms such as arbuscular mycorrhizal fungi (AMF). These symbiotic fungi are particularly critical, given their key role in ecosystem processes affecting plant community structure and function.To better understand the consequences of nutrient deposition in plant communities, a long-term nutrient addition experiment was set up in a tropical montane forest in the Andes of southern Ecuador. In this study, we investigated the impacts of 7 years of elevated N and P on AMF root colonization potential (AMF-RCP) through a greenhouse bait plant method in which we quantified root colonization. We also examined the relationship between AMF-RCP and rarefied tree diversity.After 7 years of nutrient addition, AMF-RCP was negatively correlated with soil P, positively correlated with soil N, and positively correlated with rarefied tree diversity. Our results show that AMF in this tropical montane forest are directly affected by soil N and P concentrations, but may also be indirectly impacted by shifts in rarefied tree diversity. Our research also highlights the need to fully understand the benefits and drawbacks of using different sampling methods (e.g., AMF-RCP versus direct root sampling) to robustly examine AMF-plant interactions in the future.
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Affiliation(s)
- Camille S Delavaux
- Yale School of Forestry and Environmental Studies, Yale University, 195 Prospect St, New Haven, CT, 06511, USA.
- Ecology and Evolutionary Biology, University of Kansas, Room 9, Takeru Higuchi Hall, Lawrence, KS, 66047, USA.
| | - Tessa Camenzind
- Institute of Biology, Freie Universität Berlin, Altensteinstr. 6, 14195, Berlin, Germany
- Berlin- Brandenburg Institute of Advanced Biodiversity Research, Plant Ecology, 14195, Berlin, Germany
| | - Jürgen Homeier
- Albrecht von Haller Institute of Plant Sciences, University of Göttingen, Untere Karspüle 2, 37073, Göttingen, Germany
| | - Rosa Jiménez-Paz
- Laboratorio de Ecología de Plantas, Escuela de Ciencias Biológicas, Pontificia Universidad Católica del Ecuador, Av. 12 de octubre 1076 y Roca, Apdo. 17-01-2184, Quito, Ecuador
| | - Mark Ashton
- Yale School of Forestry and Environmental Studies, Yale University, 195 Prospect St, New Haven, CT, 06511, USA
| | - Simon A Queenborough
- Yale School of Forestry and Environmental Studies, Yale University, 195 Prospect St, New Haven, CT, 06511, USA
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