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Bos PR, Berentsen J, Wientjes E. Expansion microscopy resolves the thylakoid structure of spinach. PLANT PHYSIOLOGY 2023; 194:347-358. [PMID: 37792700 PMCID: PMC10756755 DOI: 10.1093/plphys/kiad526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 09/19/2023] [Accepted: 09/19/2023] [Indexed: 10/06/2023]
Abstract
The light-harvesting reactions of photosynthesis take place on the thylakoid membrane inside chloroplasts. The thylakoid membrane is folded into appressed membranes, the grana, and nonappressed membranes that interconnect the grana, the stroma lamellae. This folding is essential for the correct functioning of photosynthesis. Electron microscopy and atomic force microscopy are commonly used to study the thylakoid membrane, but these techniques have limitations in visualizing a complete chloroplast and its organization. To overcome this limitation, we applied expansion microscopy (ExM) on isolated chloroplasts. ExM is a technique that involves physically expanding a sample in a swellable hydrogel to enhance the spatial resolution of fluorescence microscopy. Using all-protein staining, we visualized the 3D structure of spinach (Spinacia oleracea) thylakoids in detail. We were able to resolve stroma lamellae that were 60 nm apart and observe their helical wrapping around the grana. Furthermore, we accurately measured the dimensions of grana from top views of chloroplasts, which allow for precise determination of the granum diameter. Our results demonstrate that ExM is a fast and reliable technique for studying thylakoid organization in great detail.
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Affiliation(s)
- Peter R Bos
- Laboratory of Biophysics, Wageningen University & Research, Wageningen 6700 ET, The Netherlands
| | - Jarne Berentsen
- Laboratory of Biophysics, Wageningen University & Research, Wageningen 6700 ET, The Netherlands
| | - Emilie Wientjes
- Laboratory of Biophysics, Wageningen University & Research, Wageningen 6700 ET, The Netherlands
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2
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Lejeune P, Fratamico A, Bouché F, Huerga-Fernández S, Tocquin P, Périlleux C. LED color gradient as a new screening tool for rapid phenotyping of plant responses to light quality. Gigascience 2022; 11:6515743. [PMID: 35084034 PMCID: PMC8848316 DOI: 10.1093/gigascience/giab101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Revised: 11/10/2021] [Accepted: 12/15/2021] [Indexed: 11/13/2022] Open
Abstract
BACKGROUND The increasing demand for local food production is fueling high interest in the development of controlled environment agriculture. In particular, LED technology brings energy-saving advantages together with the possibility of manipulating plant phenotypes through light quality control. However, optimizing light quality is required for each cultivated plant and specific purpose. FINDINGS This article shows that the combination of LED gradient set-ups with imaging-based non-destructive plant phenotyping constitutes an interesting new screening tool with the potential to improve speed, logistics, and information output. To validate this concept, an experiment was performed to evaluate the effects of a complete range of red:blue ratios on 7 plant species: Arabidopsis thaliana, Brachypodium distachyon, Euphorbia peplus, Ocimum basilicum, Oryza sativa, Solanum lycopersicum, and Setaria viridis. Plants were exposed during 30 days to the light gradient and showed significant, but species-dependent, responses in terms of dimension, shape, and color. A time-series analysis of phenotypic descriptors highlighted growth changes but also transient responses of plant shapes to the red:blue ratio. CONCLUSION This approach, which generated a large reusable dataset, can be adapted for addressing specific needs in crop production or fundamental questions in photobiology.
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Affiliation(s)
- Pierre Lejeune
- InBioS - PhytoSYSTEMS, Laboratory of Plant Physiology, University of Liège, B22 Sart Tilman Campus, 4 Chemin de la Vallée, B-4000 Liège, Belgium
| | - Anthony Fratamico
- InBioS - PhytoSYSTEMS, Laboratory of Plant Physiology, University of Liège, B22 Sart Tilman Campus, 4 Chemin de la Vallée, B-4000 Liège, Belgium
| | - Frédéric Bouché
- InBioS - PhytoSYSTEMS, Laboratory of Plant Physiology, University of Liège, B22 Sart Tilman Campus, 4 Chemin de la Vallée, B-4000 Liège, Belgium
| | - Samuel Huerga-Fernández
- InBioS - PhytoSYSTEMS, Laboratory of Plant Physiology, University of Liège, B22 Sart Tilman Campus, 4 Chemin de la Vallée, B-4000 Liège, Belgium
| | - Pierre Tocquin
- InBioS - PhytoSYSTEMS, Laboratory of Plant Physiology, University of Liège, B22 Sart Tilman Campus, 4 Chemin de la Vallée, B-4000 Liège, Belgium
| | - Claire Périlleux
- InBioS - PhytoSYSTEMS, Laboratory of Plant Physiology, University of Liège, B22 Sart Tilman Campus, 4 Chemin de la Vallée, B-4000 Liège, Belgium
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3
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Hommel E, Liebers M, Offermann S, Pfannschmidt T. Effectiveness of Light-Quality and Dark-White Growth Light Shifts in Short-Term Light Acclimation of Photosynthesis in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2022; 12:615253. [PMID: 35046964 PMCID: PMC8761940 DOI: 10.3389/fpls.2021.615253] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Accepted: 12/07/2021] [Indexed: 05/23/2023]
Abstract
Photosynthesis needs to run efficiently under permanently changing illumination. To achieve this, highly dynamic acclimation processes optimize photosynthetic performance under a variety of rapidly changing light conditions. Such acclimation responses are acting by a complex interplay of reversible molecular changes in the photosynthetic antenna or photosystem assemblies which dissipate excess energy and balance uneven excitation between the two photosystems. This includes a number of non-photochemical quenching processes including state transitions and photosystem II remodeling. In the laboratory such processes are typically studied by selective illumination set-ups. Two set-ups known to be effective in a highly similar manner are (i) light quality shifts (inducing a preferential excitation of one photosystem over the other) or (ii) dark-light shifts (inducing a general off-on switch of the light harvesting machinery). Both set-ups result in similar effects on the plastoquinone redox state, but their equivalence in induction of photosynthetic acclimation responses remained still open. Here, we present a comparative study in which dark-light and light-quality shifts were applied to samples of the same growth batches of plants. Both illumination set-ups caused comparable effects on the phosphorylation of LHCII complexes and, hence, on the performance of state transitions, but generated different effects on the degree of state transitions and the formation of PSII super-complexes. The two light set-ups, thus, are not fully equivalent in their physiological effectiveness potentially leading to different conclusions in mechanistic models of photosynthetic acclimation. Studies on the regulation of photosynthetic light acclimation, therefore, requires to regard the respective illumination test set-up as a critical parameter that needs to be considered in the discussion of mechanistic and regulatory aspects in this subject.
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Affiliation(s)
- Elisabeth Hommel
- Pflanzenphysiologie, Institut für Biologie, Universität Leipzig, Leipzig, Germany
| | - Monique Liebers
- Molekulare Pflanzenphysiologie, Institut für Pflanzenwissenschaften und Mikrobiologie, Universität Hamburg, Hamburg, Germany
| | - Sascha Offermann
- Pflanzenphysiologie, Institut für Botanik, Naturwissenschaftliche Fakultät, Leibniz-Universität Hannover, Hanover, Germany
| | - Thomas Pfannschmidt
- Pflanzenphysiologie, Institut für Botanik, Naturwissenschaftliche Fakultät, Leibniz-Universität Hannover, Hanover, Germany
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Matsuda R, Ito H, Fujiwara K. Effects of Artificially Reproduced Fluctuations in Sunlight Spectral Distribution on the Net Photosynthetic Rate of Cucumber Leaves. FRONTIERS IN PLANT SCIENCE 2021; 12:675810. [PMID: 34211488 PMCID: PMC8239441 DOI: 10.3389/fpls.2021.675810] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 05/20/2021] [Indexed: 05/30/2023]
Abstract
The effects of photosynthetic photon flux density (PPFD) fluctuations in sunlight have already been investigated; however, the spectral photon flux density distribution (SPD) has hardly been considered. Here, sunlight SPD fluctuations recorded for 200 min in October in Tokyo, Japan were artificially reproduced using an LED-artificial sunlight source system. The net photosynthetic rate (P n) of cucumber leaves under reproduced sunlight was measured and compared with the P n estimated from a steady-state PPFD-P n curve for the same leaves. The measured and estimated P n agreed except when the PPFD was low, where the measured P n was lower than the estimated P n. The ratio of measured P n to estimated P n was 0.94-0.95 for PPFD ranges of 300-700 μmol m-2 s-1, while the value was 0.98-0.99 for 900-1,300 μmol m-2 s-1, and the overall ratio was 0.97. This 3% reduction in the measured P n compared with the P n estimated from a steady-state PPFD-P n curve was significantly smaller than the approximately 20-30% reduction reported in previous experimental and simulation studies. This result suggests that the loss of integral net photosynthetic gain under fluctuating sunlight can vary among days with different fluctuation patterns or may be non-significant when fluctuations in both PPFD and relative SPD of sunlight are taken into consideration.
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Affiliation(s)
- Ryo Matsuda
- Department of Biological and Environmental Engineering, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
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Arabidopsis Restricts Sugar Loss to a Colonizing Trichoderma harzianum Strain by Downregulating SWEET11 and -12 and Upregulation of SUC1 and SWEET2 in the Roots. Microorganisms 2021; 9:microorganisms9061246. [PMID: 34201292 PMCID: PMC8227074 DOI: 10.3390/microorganisms9061246] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 06/03/2021] [Accepted: 06/04/2021] [Indexed: 11/17/2022] Open
Abstract
Phosphate (Pi) availability has a strong influence on the symbiotic interaction between Arabidopsis and a recently described root-colonizing beneficial Trichoderma harzianum strain. When transferred to media with insoluble Ca3(PO4)2 as a sole Pi source, Arabidopsis seedlings died after 10 days. Trichoderma grew on the medium containing Ca3(PO4)2 and the fungus did colonize in roots, stems, and shoots of the host. The efficiency of the photosynthetic electron transport of the colonized seedlings grown on Ca3(PO4)2 medium was reduced and the seedlings died earlier, indicating that the fungus exerts an additional stress to the plant. Interestingly, the fungus initially alleviated the Pi starvation response and did not activate defense responses against the hyphal propagation. However, in colonized roots, the sucrose transporter genes SWEET11 and -12 were strongly down-regulated, restricting the unloading of sucrose from the phloem parenchyma cells to the apoplast. Simultaneously, up-regulation of SUC1 promoted sucrose uptake from the apoplast into the parenchyma cells and of SWEET2 sequestration of sucrose in the vacuole of the root cells. We propose that the fungus tries to escape from the Ca3(PO4)2 medium and colonizes the entire host. To prevent excessive sugar consumption by the propagating hyphae, the host restricts sugar availability in its apoplastic root space by downregulating sugar transporter genes for phloem unloading, and by upregulating transporter genes which maintain the sugar in the root cells.
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Gjindali A, Herrmann HA, Schwartz JM, Johnson GN, Calzadilla PI. A Holistic Approach to Study Photosynthetic Acclimation Responses of Plants to Fluctuating Light. FRONTIERS IN PLANT SCIENCE 2021; 12:668512. [PMID: 33936157 PMCID: PMC8079764 DOI: 10.3389/fpls.2021.668512] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Accepted: 03/23/2021] [Indexed: 05/10/2023]
Abstract
Plants in natural environments receive light through sunflecks, the duration and distribution of these being highly variable across the day. Consequently, plants need to adjust their photosynthetic processes to avoid photoinhibition and maximize yield. Changes in the composition of the photosynthetic apparatus in response to sustained changes in the environment are referred to as photosynthetic acclimation, a process that involves changes in protein content and composition. Considering this definition, acclimation differs from regulation, which involves processes that alter the activity of individual proteins over short-time periods, without changing the abundance of those proteins. The interconnection and overlapping of the short- and long-term photosynthetic responses, which can occur simultaneously or/and sequentially over time, make the study of long-term acclimation to fluctuating light in plants challenging. In this review we identify short-term responses of plants to fluctuating light that could act as sensors and signals for acclimation responses, with the aim of understanding how plants integrate environmental fluctuations over time and tailor their responses accordingly. Mathematical modeling has the potential to integrate physiological processes over different timescales and to help disentangle short-term regulatory responses from long-term acclimation responses. We review existing mathematical modeling techniques for studying photosynthetic responses to fluctuating light and propose new methods for addressing the topic from a holistic point of view.
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Affiliation(s)
- Armida Gjindali
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
| | - Helena A. Herrmann
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
- Division of Evolution & Genomic Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Jean-Marc Schwartz
- Division of Evolution & Genomic Sciences, Faculty of Biology, Medicine and Health, University of Manchester, Manchester, United Kingdom
| | - Giles N. Johnson
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
| | - Pablo I. Calzadilla
- Department of Earth and Environmental Sciences, Faculty of Science and Engineering, University of Manchester, Manchester, United Kingdom
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Mattila H, Khorobrykh S, Hakala-Yatkin M, Havurinne V, Kuusisto I, Antal T, Tyystjärvi T, Tyystjärvi E. Action spectrum of the redox state of the plastoquinone pool defines its function in plant acclimation. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 104:1088-1104. [PMID: 32889743 DOI: 10.1111/tpj.14983] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 08/11/2020] [Accepted: 08/17/2020] [Indexed: 05/09/2023]
Abstract
The plastoquinone (PQ) pool mediates electron flow and regulates photoacclimation in plants. Here we report the action spectrum of the redox state of the PQ pool in Arabidopsis thaliana, showing that 470-500, 560 or 650-660 nm light favors Photosystem II (PSII) and reduces the PQ pool, whereas 420-440, 520 or 690 nm light favors Photosystem I (PSI) and oxidizes PQ. These data were used to construct a model predicting the redox state of PQ from the spectrum of any polychromatic light source. Moderate reduction of the PQ pool induced transition to light state 2, whereas state 1 required highly oxidized PQ. In low-intensity PSI light, PQ was more oxidized than in darkness and became gradually reduced with light intensity, while weak PSII light strongly reduced PQ. Natural sunlight was found to favor PSI, which enables plants to use the redox state of the PQ pool as a measure of light intensity.
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Affiliation(s)
- Heta Mattila
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
| | - Sergey Khorobrykh
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
| | - Marja Hakala-Yatkin
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
| | - Vesa Havurinne
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
| | - Iiris Kuusisto
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
| | - Taras Antal
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
- Department of Botany and Plant Ecology, Pskov State University, Pskov, 180000, Russia
| | - Taina Tyystjärvi
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
| | - Esa Tyystjärvi
- Department of Biochemistry/Molecular Plant Biology, University of Turku, Turku, FI-20014, Finland
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Rödiger A, Galonska J, Bergner E, Agne B, Helm S, Alseekh S, Fernie AR, Thieme D, Hoehenwarter W, Hause G, Pfannschmidt T, Baginsky S. Working day and night: plastid casein kinase 2 catalyses phosphorylation of proteins with diverse functions in light- and dark-adapted plastids. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 104:546-558. [PMID: 32745315 DOI: 10.1111/tpj.14944] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2019] [Revised: 07/15/2020] [Accepted: 07/21/2020] [Indexed: 06/11/2023]
Abstract
Casein kinase 2 is a ubiquitous protein kinase that has puzzled researchers for several decades because of its pleiotropic activity. Here, we set out to identify the in vivo targets of plastid casein kinase 2 (pCK2) in Arabidopsis thaliana. Survey phosphoproteome analyses were combined with targeted analyses with wild-type and pck2 knockdown mutants to identify potential pCK2 targets by their decreased phosphorylation state in the mutant. To validate potential substrates, we complemented the pck2 knockdown line with tandem affinity tag (TAP)-tagged pCK2 and found it to restore growth parameters, as well as many, but not all, putative pCK2-dependent phosphorylation events. We further performed a targeted analysis at the end-of-night to increase the specificity of target protein identification. This analysis confirmed light-independent phosphorylation of several pCK2 target proteins. Based on the aforementioned data, we define a set of in vivo pCK2-targets that span different chloroplast functions, such as metabolism, transcription, translation and photosynthesis. The pleiotropy of pCK2 functions is also manifested by altered state transition kinetics during short-term acclimation and significant alterations in the mutant metabolism, supporting its function in photosynthetic regulation. Thus, our data expand our understanding on chloroplast phosphorylation networks and provide insights into kinase networks in the regulation of chloroplast functions.
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Affiliation(s)
- Anja Rödiger
- Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Charles Tanford Proteinzentrum, Kurt-Mothes-Str. 3a, Halle (Saale), 06120, Germany
| | - Johann Galonska
- Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Charles Tanford Proteinzentrum, Kurt-Mothes-Str. 3a, Halle (Saale), 06120, Germany
| | - Elena Bergner
- Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Charles Tanford Proteinzentrum, Kurt-Mothes-Str. 3a, Halle (Saale), 06120, Germany
| | - Birgit Agne
- Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Charles Tanford Proteinzentrum, Kurt-Mothes-Str. 3a, Halle (Saale), 06120, Germany
| | - Stefan Helm
- Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Charles Tanford Proteinzentrum, Kurt-Mothes-Str. 3a, Halle (Saale), 06120, Germany
| | - Saleh Alseekh
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Wissenschaftspark Golm, Potsdam, 14476, Germany
| | - Alisdair R Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Wissenschaftspark Golm, Potsdam, 14476, Germany
| | - Domenika Thieme
- Leibniz-Institut für Pflanzenbiochemie, Weinbergweg 3, Halle (Saale), 06120, Germany
| | - Wolfgang Hoehenwarter
- Leibniz-Institut für Pflanzenbiochemie, Weinbergweg 3, Halle (Saale), 06120, Germany
| | - Gerd Hause
- Biocentre, Martin-Luther-University Halle-Wittenberg, Weinbergweg 22, Halle (Saale), 06120, Germany
| | | | - Sacha Baginsky
- Institute of Biochemistry and Biotechnology, Martin-Luther-University Halle-Wittenberg, Charles Tanford Proteinzentrum, Kurt-Mothes-Str. 3a, Halle (Saale), 06120, Germany
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Zheng L, Steppe K, Van Labeke MC. Spectral quality of monochromatic LED affects photosynthetic acclimation to high-intensity sunlight of Chrysanthemum and Spathiphyllum. PHYSIOLOGIA PLANTARUM 2020; 169:10-26. [PMID: 31957014 DOI: 10.1111/ppl.13067] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Revised: 12/22/2019] [Accepted: 01/15/2020] [Indexed: 06/10/2023]
Abstract
Vertical farming using light-emitting diode offers potential for the early production phase (few weeks) of young ornamental plants. However, once transferred to the greenhouse, the photosynthetic acclimation of these young plants might depend on this initial light regime. To obtain insight about this acclimatization, Chrysanthemum (sun species) and Spathiphyllum (shade species) were preconditioned in growth chambers for 4 weeks under four light qualities: blue (B), red (R), red/blue (RB, 60% R) and white (W) at 100 μmol m-2 s-1 . Monochromatic light (R and B) limited leaf development of both species, which resulted in a lower leaf mass per area when compared to multispectral light (RB for Chrysanthemum, RB and W for Spathiphyllum). R-developed leaves had a lower photosynthetic efficiency in both species. After the light quality pretreatment, plants were transferred to the greenhouse with high-intensity natural light conditions. On the first day of transfer, R and B preconditioned leaves of both species had an inhibited photosynthesis. After 1 week in natural light condition, rapid light curve parameters of Chrysanthemum leaves that developed under B acclimated to sunlight had a similar level than RB-developed leaves unlike R-leaves. Spathiphyllum leaves showed a decrease in maximum electron transport rate and this was most pronounced for the R pretreatment. After 1 month, R-preconditioned Chrysanthemum had the lowest dry mass, while no effects on the dry weight of Spathiphyllum with respect to the pretreatments were observed. Light quality during preconditioning affected the leaf ability to acclimate to natural high light intensities in greenhouse environment.
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Affiliation(s)
- Liang Zheng
- College of Water Resources and Civil Engineering, China Agricultural University, Qinghua East Road 17, 100083, Beijing, China
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000, Ghent, Belgium
| | - Kathy Steppe
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000, Ghent, Belgium
| | - Marie-Christine Van Labeke
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000, Ghent, Belgium
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Morales A, Kaiser E. Photosynthetic Acclimation to Fluctuating Irradiance in Plants. FRONTIERS IN PLANT SCIENCE 2020; 11:268. [PMID: 32265952 PMCID: PMC7105707 DOI: 10.3389/fpls.2020.00268] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Accepted: 02/20/2020] [Indexed: 05/07/2023]
Abstract
Unlike the short-term responses of photosynthesis to fluctuating irradiance, the long-term response (i.e., acclimation) at the chloroplast, leaf, and plant level has received less attention so far. The ability of plants to acclimate to irradiance fluctuations and the speed at which this acclimation occurs are potential limitations to plant growth under field conditions, and therefore this process deserves closer study. In the first section of this review, we look at the sources of natural irradiance fluctuations, their effects on short-term photosynthesis, and the interaction of these effects with circadian rhythms. This is followed by an overview of the mechanisms that are involved in acclimation to fluctuating (or changes of) irradiance. We highlight the chain of events leading to acclimation: retrograde signaling, systemic acquired acclimation (SAA), gene transcription, and changes in protein abundance. We also review how fluctuating irradiance is applied in experiments and highlight the fact that they are significantly slower than natural fluctuations in the field, although the technology to achieve realistic fluctuations exists. Finally, we review published data on the effects of growing plants under fluctuating irradiance on different plant traits, across studies, spatial scales, and species. We show that, when plants are grown under fluctuating irradiance, the chlorophyll a/b ratio and plant biomass decrease, specific leaf area increases, and photosynthetic capacity as well as root/shoot ratio are, on average, unaffected.
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Affiliation(s)
- Alejandro Morales
- Centre for Crop Systems Analysis, Plant Science Group, Wageningen University and Research, Wageningen, Netherlands
- Plant Ecophysiology, Institute of Environmental Biology, Utrecht University, Utrecht, Netherlands
- Molecular Plant Physiology, Institute of Environmental Biology, Utrecht University, Utrecht, Netherlands
| | - Elias Kaiser
- Horticulture and Product Physiology, Plant Science Group, Wageningen University and Research, Wageningen, Netherlands
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Tian T, Qiao G, Wen Z, Deng B, Qiu Z, Hong Y, Wen X. Comparative transcriptome analysis reveals the molecular regulation underlying the adaptive mechanism of cherry (Cerasus pseudocerasus Lindl.) to shelter covering. BMC PLANT BIOLOGY 2020; 20:27. [PMID: 31952478 PMCID: PMC6967096 DOI: 10.1186/s12870-019-2224-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2019] [Accepted: 12/30/2019] [Indexed: 05/30/2023]
Abstract
BACKGROUND Rain-shelter covering is widely applied during cherry fruit development in subtropical monsoon climates with the aim of decreasing the dropping and cracking of fruit caused by excessive rainfall. Under rain-shelter covering, the characteristics of the leaves and fruit of the cherry plant may adapt to the changes in the microclimate. However, the molecular mechanism underlying such adaptation remains unclear, although clarifying it may be helpful for improving the yield and quality of cherry under rain-shelter covering. RESULTS To better understand the regulation and adaptive mechanism of cherry under rain-shelter covering, 38,621 and 3584 differentially expressed genes were identified with a combination of Illumina HiSeq and single-molecule real-time sequencing in leaves and fruits, respectively, at three developmental stages. Among these, key genes, such as those encoding photosynthetic-antenna proteins (Lhca and Lhcb) and photosynthetic electron transporters (PsbP, PsbR, PsbY, and PetF), were up-regulated following the application of rain-shelter covering, leading to increased efficiency of light utilization. The mRNA levels of genes involved in carbon fixation, namely, rbcL and rbcS, were clearly increased compared with those under shelter-free conditions, resulting in improved CO2 utilization. Furthermore, the transcription levels of genes involved in chlorophyll (hemA, hemN, and chlH) and carotenoid synthesis (crtB, PDS, crtISO, and lcyB) in the sheltered leaves peaked earlier than those in the unsheltered leaves, thereby promoting organic matter accumulation in leaves. Remarkably, the expression levels of key genes involved in the metabolic pathways of phenylpropanoid (PAL, C4H, and 4CL) and flavonoid (CHS, CHI, F3'H, DFR, and ANS) in the sheltered fruits were also up-regulated earlier than of those in the unsheltered fruits, conducive to an increase in anthocyanin content in the fruits. CONCLUSIONS According to the physiological indicators and transcriptional expression levels of the related genes, the adaptive regulation mechanism of cherry plants was systematically revealed. These findings can help understand the effect of rain-shelter covering on Chinese cherry cultivation in rainy regions.
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Affiliation(s)
- Tian Tian
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
- Institute for Forest Resources & Environment of Guizhou/ College of Forestry, Guizhou University, Guiyang, 550025 People’s Republic of China
| | - Guang Qiao
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
| | - Zhuang Wen
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
| | - Bin Deng
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
| | - Zhilang Qiu
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
| | - Yi Hong
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
| | - Xiaopeng Wen
- Key Laboratory of Plant Resource Conservation and Germplasm Innovation in Mountainous Region (Ministry of Education), Institute of Agro-bioengineering/ College of Life Science, Guizhou University, Guiyang, 550025 People’s Republic of China
- Institute for Forest Resources & Environment of Guizhou/ College of Forestry, Guizhou University, Guiyang, 550025 People’s Republic of China
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12
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Taylor CR, vanIeperen W, Harbinson J. Demonstration of a relationship between state transitions and photosynthetic efficiency in a higher plant. Biochem J 2019; 476:3295-3312. [PMID: 31694051 PMCID: PMC6854431 DOI: 10.1042/bcj20190576] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2019] [Revised: 10/09/2019] [Accepted: 10/09/2019] [Indexed: 11/17/2022]
Abstract
A consequence of the series configuration of PSI and PSII is that imbalanced excitation of the photosystems leads to a reduction in linear electron transport and a drop in photosynthetic efficiency. Achieving balanced excitation is complicated by the distinct nature of the photosystems, which differ in composition, absorption spectra, and intrinsic efficiency, and by a spectrally variable natural environment. The existence of long- and short-term mechanisms that tune the photosynthetic apparatus and redistribute excitation energy between the photosystems highlights the importance of maintaining balanced excitation. In the short term, state transitions help restore balance through adjustments which, though not fully characterised, are observable using fluorescence techniques. Upon initiation of a state transition in algae and cyanobacteria, increases in photosynthetic efficiency are observable. However, while higher plants show fluorescence signatures associated with state transitions, no correlation between a state transition and photosynthetic efficiency has been demonstrated. In the present study, state 1 and state 2 were alternately induced in tomato leaves by illuminating leaves produced under artificial sun and shade spectra with a sequence of irradiances extreme in terms of PSI or PSII overexcitation. Light-use efficiency increased in both leaf types during transition from one state to the other with remarkably similar kinetics to that of F'm/Fm, F'o/Fo, and, during the PSII-overexciting irradiance, ΦPSII and qP. We have provided compelling evidence for the first time of a correlation between photosynthetic efficiency and state transitions in a higher plant. The importance of this relationship in natural ecophysiological contexts remains to be elucidated.
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Affiliation(s)
- Craig R. Taylor
- Department of Plant Sciences, Horticulture and Product Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands
| | - Wim vanIeperen
- Department of Plant Sciences, Horticulture and Product Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands
| | - Jeremy Harbinson
- Department of Plant Sciences, Horticulture and Product Physiology, Wageningen University, 6708 PB Wageningen, The Netherlands
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13
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Quero G, Bonnecarrère V, Fernández S, Silva P, Simondi S, Borsani O. Light-use efficiency and energy partitioning in rice is cultivar dependent. PHOTOSYNTHESIS RESEARCH 2019; 140:51-63. [PMID: 30448978 DOI: 10.1007/s11120-018-0605-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2018] [Accepted: 11/12/2018] [Indexed: 06/09/2023]
Abstract
One of the main limitations of rice yield in regions of high productive performance is the light-use efficiency (LUE). LUE can be determined at the whole-plant level or at the photosynthetic apparatus level (quantum yield). Both vary according to the intensity and spectral quality of light. The aim of this study was to analyze the cultivar dependence regarding LUE at the plant level and quantum yield using four rice cultivars and four light environments. To achieve this, two in-house Light Systems were developed: Light System I which generates white light environments (spectral quality of 400-700 nm band) and Light System II which generates a blue-red light environment (spectral quality of 400-500 nm and 600-700 nm bands). Light environment conditioned the LUE and quantum yield in PSII of all evaluated cultivars. In white environments, LUE decreased when light intensity duplicated, while in blue-red environments no differences on LUE were observed. Energy partition in PSII was determined by the quantum yield of three de-excitation processes using chlorophyll fluorescence parameters. For this purpose, a quenching analysis followed by a relaxation analysis was performed. The damage of PSII was only increased by low levels of energy in white environments, leading to a decrease in photochemical processes due to the closure of the reaction centers. In conclusion, all rice cultivars evaluated in this study were sensible to low levels of radiation, but the response was cultivar dependent. There was not a clear genotypic relation between LUE and quantum yield.
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Affiliation(s)
- Gastón Quero
- Departamento de Biología Vegetal, Facultad de Agronomía, Universidad de la República, Garzón 809, Montevideo, Uruguay
- Instituto Nacional de Investigación Agropecuaria (INIA), Unidad de Biotecnología. Estación Experimental Wilson Ferreira Aldunate, Ruta 48, Km 10, Rincón del Colorado, 90200, Canelones, Uruguay
| | - Victoria Bonnecarrère
- Instituto Nacional de Investigación Agropecuaria (INIA), Unidad de Biotecnología. Estación Experimental Wilson Ferreira Aldunate, Ruta 48, Km 10, Rincón del Colorado, 90200, Canelones, Uruguay.
| | - Sebastián Fernández
- Instituto de Ingeniería Eléctrica, Facultad de Ingeniería, Universidad de la República, Julio Herrera y Reissig 565, Montevideo, Uruguay
| | - Pedro Silva
- Departamento de Biología Vegetal, Facultad de Agronomía, Universidad de la República, Garzón 809, Montevideo, Uruguay
| | - Sebastián Simondi
- Area de Matemática, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Cuyo (FCEN-UNCuyo), Padre Contreras 1300, Mendoza, Argentina
| | - Omar Borsani
- Departamento de Biología Vegetal, Facultad de Agronomía, Universidad de la República, Garzón 809, Montevideo, Uruguay
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14
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Leister D. Piecing the Puzzle Together: The Central Role of Reactive Oxygen Species and Redox Hubs in Chloroplast Retrograde Signaling. Antioxid Redox Signal 2019; 30:1206-1219. [PMID: 29092621 DOI: 10.1089/ars.2017.7392] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
SIGNIFICANCE Reactive oxygen species (ROS) and redox regulation are established components of chloroplast-nucleus retrograde signaling. Recent Advances: In recent years, a complex array of putative retrograde signaling molecules and novel signaling pathways have emerged, including various metabolites, chloroplast translation, mobile transcription factors, calcium, and links to the unfolded protein response. This critical mass of information now permits us to fit individual pieces into a larger picture and outline a few important stimuli and pathways. CRITICAL ISSUES In this review, we summarize how ROS and redox hubs directly (e.g., via hydrogen peroxide [H2O2]) and indirectly (e.g., by triggering the production of signaling metabolites) regulate chloroplast retrograde signaling. Indeed, evidence is accumulating that most of the presumptive signaling metabolites so far identified are produced directly by ROS (such as β-cyclocitral) or indirectly by redox- or ROS-mediated regulation of key enzymes in metabolic pathways, ultimately leading to the accumulation of certain precursors (e.g., methylerythritol cyclodiphosphate and 3'-phosphoadenosine 5'-phosphate) with signal function. Of the ROS generated in the chloroplast, only H2O2 is likely to leave the organelle, and recent results suggest that efficient and specific transfer of information via H2O2 occurs through physical association of chloroplasts with the nucleus. FUTURE DIRECTIONS The impact of ROS and redox regulation on chloroplast-nucleus communication is even greater than previously thought, and it can be expected that further instances of control of retrograde signaling by ROS/redox regulation will be revealed in future, perhaps including the basis for the enigmatic GUN response and translation-dependent signals.
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Affiliation(s)
- Dario Leister
- Plant Molecular Biology, Department Biology I, Ludwig-Maximilians-University Munich (LMU), Planegg-Martinsried, Germany
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15
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Fold-change Response of Photosynthesis to Step Increases of Light Level. iScience 2018; 8:126-137. [PMID: 30312863 PMCID: PMC6176854 DOI: 10.1016/j.isci.2018.09.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 08/28/2018] [Accepted: 09/20/2018] [Indexed: 11/22/2022] Open
Abstract
Plants experience light intensity over several orders of magnitude. High light is stressful, and plants have several protective feedback mechanisms against this stress. Here we asked how plants respond to sudden rises at low ambient light, far below stressful levels. For this, we studied the fluorescence of excited chlorophyll a of photosystem II in Arabidopsis thaliana plants in response to step increases in light level at different background illuminations. We found a response at low-medium light with characteristics of a sensory system: fold-change detection (FCD), Weber law, and exact adaptation, in which the response depends only on relative, and not absolute, light changes. We tested various FCD circuits and provide evidence for an incoherent feedforward mechanism upstream of known stress response feedback loops. These findings suggest that plant photosynthesis may have a sensory modality for low light background that responds early to small light increases, to prepare for damaging high light levels. Chl a fluorescence responds to fold-change (FCD) in low-medium input light Identified fast feedforward (IFFL) regulation that depends on direct light input The direct sensing of input and FCD response are typical of sensory modules The IFFL precedes known feedback photoprotective regulation
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16
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Liebers M, Chevalier F, Blanvillain R, Pfannschmidt T. PAP genes are tissue- and cell-specific markers of chloroplast development. PLANTA 2018; 248:629-646. [PMID: 29855700 DOI: 10.1007/s00425-018-2924-8] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2018] [Accepted: 05/21/2018] [Indexed: 05/03/2023]
Abstract
Expression of PAP genes is strongly coordinated and represents a highly selective cell-specific marker associated with the development of chloroplasts in photosynthetically active organs of Arabidopsis seedlings and adult plants. Transcription in plastids of plants depends on the activity of phage-type single-subunit nuclear-encoded RNA polymerases (NEP) and a prokaryotic multi-subunit plastid-encoded RNA polymerase (PEP). PEP is comprised of the core subunits α, β, β' and β″ encoded by rpoA, rpoB/C1/C2 genes located on the plastome. This core enzyme needs to interact with nuclear-encoded sigma factors for proper promoter recognition. In chloroplasts, the core enzyme is surrounded by additional 12 nuclear-encoded subunits, all of eukaryotic origin. These PEP-associated proteins (PAPs) were found to be essential for chloroplast biogenesis as Arabidopsis inactivation mutants for each of them revealed albino or pale-green phenotypes. In silico analysis of transcriptomic data suggests that PAP genes represent a tightly controlled regulon, whereas wetlab data are sparse and correspond to the expression of individual genes mostly studied at the seedling stage. Using RT-PCR, transient, and stable expression assays of PAP promoter-GUS-constructs, we do provide, in this study, a comprehensive expression catalogue for PAP genes throughout the life cycle of Arabidopsis. We demonstrate a selective impact of light on PAP gene expression and uncover a high tissue specificity that is coupled to developmental progression especially during the transition from skotomorphogenesis to photomorphogenesis. Our data imply that PAP gene expression precedes the formation of chloroplasts rendering PAP genes a tissue- and cell-specific marker of chloroplast biogenesis.
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Affiliation(s)
- Monique Liebers
- LPCV, CEA, CNRS, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France
| | - Fabien Chevalier
- LPCV, CEA, CNRS, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France
| | - Robert Blanvillain
- LPCV, CEA, CNRS, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France.
| | - Thomas Pfannschmidt
- LPCV, CEA, CNRS, INRA, Université Grenoble-Alpes, BIG, 38000, Grenoble, France.
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17
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Murakami K, Matsuda R, Fujiwara K. A Mathematical Model of Photosynthetic Electron Transport in Response to the Light Spectrum Based on Excitation Energy Distributed to Photosystems. PLANT & CELL PHYSIOLOGY 2018; 59:1643-1651. [PMID: 29697808 DOI: 10.1093/pcp/pcy085] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2017] [Accepted: 04/23/2018] [Indexed: 06/08/2023]
Abstract
To enable us to analyze more systematically the effects of the spectral distribution of light (i.e. light quality) on photosynthetic electron transport, we propose a simple mathematical model which describes electron transport reactions under light-limited conditions based on the excitation energy distributed to the photosystems. The model assumes that the rate-limiting photosystem performs the photochemical reaction at its maximum yield, while the yield in the other photosystem is passively down-regulated to equalize the rates of linear electron transport through the photosystems. Using intact cucumber leaves, we tested the model by comparing actual and estimated photosynthetic parameters under several combinations of photon flux densities of red and far-red lights (R and FR, respectively). Simultaneously provided R and FR yielded greater gross photosynthetic rates than the sums of the rates under only R and only FR, which is known as the 'enhancement effect'. The present model reproduced these non-additive increases in the gross photosynthetic rates in response to supplemental FR to R and provided more accurate estimates than an existing method that did not take the enhancement effect into account (root mean square errors: 0.11 and 0.21 μmol m-2 s-1, respectively). Using the present model, the photon flux density of the supplemental FR which gives the changing point of rate-limiting photosystem and the photochemical yields of the non-rate-limiting photosystems were estimated reasonably well. The present study has therefore formulated a simplified quantitative electron transport model in response to the light spectrum based on generally accepted concepts and demonstrated its validity experimentally.
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Affiliation(s)
- Keach Murakami
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, Japan
| | - Ryo Matsuda
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, Japan
| | - Kazuhiro Fujiwara
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, Japan
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18
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Yao H, Zhang Y, Yi X, Zhang X, Fan D, Chow WS, Zhang W. Diaheliotropic leaf movement enhances leaf photosynthetic capacity and photosynthetic light and nitrogen use efficiency via optimising nitrogen partitioning among photosynthetic components in cotton (Gossypium hirsutum L.). PLANT BIOLOGY (STUTTGART, GERMANY) 2018; 20:213-222. [PMID: 29222927 DOI: 10.1111/plb.12678] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Accepted: 12/01/2017] [Indexed: 06/07/2023]
Abstract
Phototropic leaf movement of plants is an effective mechanism for adapting to light conditions. Light is the major driver of plant photosynthesis. Leaf N is also an important limiting factor on leaf photosynthetic potential. Cotton (Gossypium hirsutum L.) exhibits diaheliotropic leaf movement. Here, we compared the long-term photosynthetic acclimation of fixed leaves (restrained) and free leaves (allowed free movement) in cotton. The fixed leaves and free leaves were used for determination of PAR, leaf chlorophyll concentration, leaf N content and leaf gas exchange. The measurements were conducted under clear sky conditions at 0, 7, 15 and 30 days after treatment (DAT). The results showed that leaf N allocation and partitioning among different components of the photosynthetic apparatus were significantly affected by diaheliotropic leaf movement. Diaheliotropic leaf movement significantly increased light interception per unit leaf area, which in turn affected leaf mass per area (LMA), leaf N content (NA ) and leaf N allocation to photosynthesis (NP ). In addition, cotton leaves optimised leaf N allocation to the photosynthetic apparatus by adjusting leaf mass per area and NA in response to optimal light interception. In the presence of diaheliotropic leaf movement, cotton leaves optimised their structural tissue and photosynthetic characteristics, such as LMA, NA and leaf N allocation to photosynthesis, so that leaf photosynthetic capacity was maximised to improve the photosynthetic use efficiency of light and N under high light conditions.
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Affiliation(s)
- H Yao
- The Key Laboratory of Oasis Eco-agriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, China
- Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, Australia
| | - Y Zhang
- The Key Laboratory of Oasis Eco-agriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, China
| | - X Yi
- The Key Laboratory of Oasis Eco-agriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, China
| | - X Zhang
- The Key Laboratory of Oasis Eco-agriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, China
| | - D Fan
- Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, Australia
| | - W S Chow
- Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, Australia
| | - W Zhang
- The Key Laboratory of Oasis Eco-agriculture, Xinjiang Production and Construction Corps, Shihezi University, Shihezi, Xinjiang, China
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19
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Murakami K, Matsuda R, Fujiwara K. Quantification of excitation energy distribution between photosystems based on a mechanistic model of photosynthetic electron transport. PLANT, CELL & ENVIRONMENT 2018; 41:148-159. [PMID: 28548208 DOI: 10.1111/pce.12986] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2017] [Revised: 04/16/2017] [Accepted: 04/25/2017] [Indexed: 06/07/2023]
Abstract
Absorbed light energy is converted into excitation energy. The excitation energy is distributed to photosystems depending on the wavelength and drives photochemical reactions. A non-destructive, mechanistic and quantitative method for estimating the fraction of the excitation energy distributed to photosystem II (f) was developed. For the f values for two simultaneously provided actinic lights (ALs) with different spectral distributions to be estimated, photochemical yields of the photosystems were measured under the ALs and were then fitted to an electron transport model assuming the balance between the electron transport rates through the photosystems. For the method to be tested using leaves with different properties in terms of the long-term and short-term acclimation (adjustment of photosystem stoichiometry and state transition, respectively), the f values for red and far-red light (R and FR) were estimated in leaves grown (~1 week) under white light without and with supplemental FR and adapted (~10 min) to R without and with supplemental FR. The f values for R were clearly greater than those for FR and those of leaves grown with and adapted to supplemental FR tended to be higher than the controls. These results are consistent with previous studies and therefore support the validity of the proposed method.
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Affiliation(s)
- Keach Murakami
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-8657, Japan
| | - Ryo Matsuda
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-8657, Japan
| | - Kazuhiro Fujiwara
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-8657, Japan
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20
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A chloroplast thylakoid lumen protein is required for proper photosynthetic acclimation of plants under fluctuating light environments. Proc Natl Acad Sci U S A 2017; 114:E8110-E8117. [PMID: 28874535 DOI: 10.1073/pnas.1712206114] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
Despite our increasingly sophisticated understanding of mechanisms ensuring efficient photosynthesis under laboratory-controlled light conditions, less is known about the regulation of photosynthesis under fluctuating light. This is important because-in nature-photosynthetic organisms experience rapid and extreme changes in sunlight, potentially causing deleterious effects on photosynthetic efficiency and productivity. Here we report that the chloroplast thylakoid lumenal protein MAINTENANCE OF PHOTOSYSTEM II UNDER HIGH LIGHT 2 (MPH2; encoded by At4g02530) is required for growth acclimation of Arabidopsis thaliana plants under controlled photoinhibitory light and fluctuating light environments. Evidence is presented that mph2 mutant light stress susceptibility results from a defect in photosystem II (PSII) repair, and our results are consistent with the hypothesis that MPH2 is involved in disassembling monomeric complexes during regeneration of dimeric functional PSII supercomplexes. Moreover, mph2-and previously characterized PSII repair-defective mutants-exhibited reduced growth under fluctuating light conditions, while PSII photoprotection-impaired mutants did not. These findings suggest that repair is not only required for PSII maintenance under static high-irradiance light conditions but is also a regulatory mechanism facilitating photosynthetic adaptation under fluctuating light environments. This work has implications for improvement of agricultural plant productivity through engineering PSII repair.
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21
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Kalaji HM, Schansker G, Brestic M, Bussotti F, Calatayud A, Ferroni L, Goltsev V, Guidi L, Jajoo A, Li P, Losciale P, Mishra VK, Misra AN, Nebauer SG, Pancaldi S, Penella C, Pollastrini M, Suresh K, Tambussi E, Yanniccari M, Zivcak M, Cetner MD, Samborska IA, Stirbet A, Olsovska K, Kunderlikova K, Shelonzek H, Rusinowski S, Bąba W. Frequently asked questions about chlorophyll fluorescence, the sequel. PHOTOSYNTHESIS RESEARCH 2017; 132:13-66. [PMID: 27815801 PMCID: PMC5357263 DOI: 10.1007/s11120-016-0318-y] [Citation(s) in RCA: 222] [Impact Index Per Article: 31.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2016] [Accepted: 10/17/2016] [Indexed: 05/20/2023]
Abstract
Using chlorophyll (Chl) a fluorescence many aspects of the photosynthetic apparatus can be studied, both in vitro and, noninvasively, in vivo. Complementary techniques can help to interpret changes in the Chl a fluorescence kinetics. Kalaji et al. (Photosynth Res 122:121-158, 2014a) addressed several questions about instruments, methods and applications based on Chl a fluorescence. Here, additional Chl a fluorescence-related topics are discussed again in a question and answer format. Examples are the effect of connectivity on photochemical quenching, the correction of F V /F M values for PSI fluorescence, the energy partitioning concept, the interpretation of the complementary area, probing the donor side of PSII, the assignment of bands of 77 K fluorescence emission spectra to fluorescence emitters, the relationship between prompt and delayed fluorescence, potential problems when sampling tree canopies, the use of fluorescence parameters in QTL studies, the use of Chl a fluorescence in biosensor applications and the application of neural network approaches for the analysis of fluorescence measurements. The answers draw on knowledge from different Chl a fluorescence analysis domains, yielding in several cases new insights.
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Affiliation(s)
- Hazem M. Kalaji
- Department of Plant Physiology, Faculty of Agriculture and Biology, Warsaw University of Life Sciences – SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | | | - Marian Brestic
- Department of Plant Physiology, Slovak Agricultural University, Tr. A. Hlinku 2, 949 76 Nitra, Slovak Republic
| | - Filippo Bussotti
- Department of Agricultural, Food and Environmental Sciences, University of Florence, Piazzale delle Cascine 28, 50144 Florence, Italy
| | - Angeles Calatayud
- Departamento de Horticultura, Instituto Valenciano de Investigaciones Agrarias, Ctra. Moncada-Náquera Km 4.5., 46113 Moncada, Valencia Spain
| | - Lorenzo Ferroni
- Department of Life Sciences and Biotechnology, University of Ferrara, Corso Ercole I d’Este, 32, 44121 Ferrara, Italy
| | - Vasilij Goltsev
- Department of Biophysics and Radiobiology, Faculty of Biology, St. Kliment Ohridski University of Sofia, 8 Dr.Tzankov Blvd., 1164 Sofia, Bulgaria
| | - Lucia Guidi
- Department of Agriculture, Food and Environment, Via del Borghetto, 80, 56124 Pisa, Italy
| | - Anjana Jajoo
- School of Life Sciences, Devi Ahilya University, Indore, M.P. 452 001 India
| | - Pengmin Li
- State Key Laboratory of Crop Stress Biology for Arid Areas, College of Horticulture, Northwest A&F University, Yangling, 712100 Shaanxi China
| | - Pasquale Losciale
- Consiglio per la ricerca in agricoltura e l’analisi dell’economia agraria [Research Unit for Agriculture in Dry Environments], 70125 Bari, Italy
| | - Vinod K. Mishra
- Department of Biotechnology, Doon (P.G.) College of Agriculture Science, Dehradun, Uttarakhand 248001 India
| | - Amarendra N. Misra
- Centre for Life Sciences, Central University of Jharkhand, Ratu-Lohardaga Road, Ranchi, 835205 India
| | - Sergio G. Nebauer
- Departamento de Producción vegetal, Universitat Politècnica de València, Camino de Vera sn., 46022 Valencia, Spain
| | - Simonetta Pancaldi
- Department of Life Sciences and Biotechnology, University of Ferrara, Corso Ercole I d’Este, 32, 44121 Ferrara, Italy
| | - Consuelo Penella
- Departamento de Horticultura, Instituto Valenciano de Investigaciones Agrarias, Ctra. Moncada-Náquera Km 4.5., 46113 Moncada, Valencia Spain
| | - Martina Pollastrini
- Department of Agricultural, Food and Environmental Sciences, University of Florence, Piazzale delle Cascine 28, 50144 Florence, Italy
| | - Kancherla Suresh
- ICAR – Indian Institute of Oil Palm Research, Pedavegi, West Godavari Dt., Andhra Pradesh 534 450 India
| | - Eduardo Tambussi
- Institute of Plant Physiology, INFIVE (Universidad Nacional de La Plata — Consejo Nacional de Investigaciones Científicas y Técnicas), Diagonal 113 N°495, CC 327, La Plata, Argentina
| | - Marcos Yanniccari
- Institute of Plant Physiology, INFIVE (Universidad Nacional de La Plata — Consejo Nacional de Investigaciones Científicas y Técnicas), Diagonal 113 N°495, CC 327, La Plata, Argentina
| | - Marek Zivcak
- Department of Plant Physiology, Slovak Agricultural University, Tr. A. Hlinku 2, 949 76 Nitra, Slovak Republic
| | - Magdalena D. Cetner
- Department of Plant Physiology, Faculty of Agriculture and Biology, Warsaw University of Life Sciences – SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Izabela A. Samborska
- Department of Plant Physiology, Faculty of Agriculture and Biology, Warsaw University of Life Sciences – SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | | | - Katarina Olsovska
- Department of Plant Physiology, Slovak University of Agriculture, A. Hlinku 2, 94976 Nitra, Slovak Republic
| | - Kristyna Kunderlikova
- Department of Plant Physiology, Slovak University of Agriculture, A. Hlinku 2, 94976 Nitra, Slovak Republic
| | - Henry Shelonzek
- Department of Plant Anatomy and Cytology, Faculty of Biology and Environmental Protection, University of Silesia, ul. Jagiellońska 28, 40-032 Katowice, Poland
| | - Szymon Rusinowski
- Institute for Ecology of Industrial Areas, Kossutha 6, 40-844 Katowice, Poland
| | - Wojciech Bąba
- Department of Plant Ecology, Institute of Botany, Jagiellonian University, Lubicz 46, 31-512 Kraków, Poland
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22
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Wientjes E, Philippi J, Borst JW, van Amerongen H. Imaging the Photosystem I/Photosystem II chlorophyll ratio inside the leaf. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2017; 1858:259-265. [DOI: 10.1016/j.bbabio.2017.01.008] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Revised: 01/10/2017] [Accepted: 01/13/2017] [Indexed: 02/03/2023]
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Murakami K, Matsuda R, Fujiwara K. Interaction between the spectral photon flux density distributions of light during growth and for measurements in net photosynthetic rates of cucumber leaves. PHYSIOLOGIA PLANTARUM 2016; 158:213-24. [PMID: 26822286 DOI: 10.1111/ppl.12421] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2015] [Revised: 12/03/2015] [Accepted: 12/14/2015] [Indexed: 05/09/2023]
Abstract
The net photosynthetic rate of a leaf becomes acclimated to the plant's environment during growth. These rates are often measured, evaluated and compared among leaves of plants grown under different light conditions. In this study, we compared net photosynthetic rates of cucumber leaves grown under white light-emitting diode (LED) light without and with supplemental far-red (FR) LED light (W- and WFR-leaves, respectively) under three different measuring light (ML) conditions: their respective growth light (GL), artificial sunlight (AS) and blue and red (BR) light. The difference in the measured photosynthetic rates between W- and WFR-leaves was greater under BR than under GL and AS. In other words, an interaction between supplemental FR light during growth and the spectral photon flux density distribution (SPD) of ML affected the measured net photosynthetic rates. We showed that the comparison and evaluation of leaf photosynthetic rates and characteristics can be biased depending on the SPD of ML, especially for plants grown under different photon flux densities in the FR waveband. We also investigated the mechanism of the interaction. We confirmed that the distribution of excitation energy between the two photosystems (PSs) changed in response to the SPD of GL, and that this change resulted in the interaction, as suggested in previous reports. However, changes in PS stoichiometry could not completely explain the adjustment in excitation energy distribution observed in this study, suggesting that other mechanisms may be involved in the interaction.
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Affiliation(s)
- Keach Murakami
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-8657, Japan.
| | - Ryo Matsuda
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-8657, Japan
| | - Kazuhiro Fujiwara
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo, Tokyo, 113-8657, Japan
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Jorge TF, Rodrigues JA, Caldana C, Schmidt R, van Dongen JT, Thomas-Oates J, António C. Mass spectrometry-based plant metabolomics: Metabolite responses to abiotic stress. MASS SPECTROMETRY REVIEWS 2016; 35:620-49. [PMID: 25589422 DOI: 10.1002/mas.21449] [Citation(s) in RCA: 145] [Impact Index Per Article: 18.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2014] [Revised: 10/02/2014] [Accepted: 10/14/2014] [Indexed: 05/08/2023]
Abstract
Metabolomics is one omics approach that can be used to acquire comprehensive information on the composition of a metabolite pool to provide a functional screen of the cellular state. Studies of the plant metabolome include analysis of a wide range of chemical species with diverse physical properties, from ionic inorganic compounds to biochemically derived hydrophilic carbohydrates, organic and amino acids, and a range of hydrophobic lipid-related compounds. This complexitiy brings huge challenges to the analytical technologies employed in current plant metabolomics programs, and powerful analytical tools are required for the separation and characterization of this extremely high compound diversity present in biological sample matrices. The use of mass spectrometry (MS)-based analytical platforms to profile stress-responsive metabolites that allow some plants to adapt to adverse environmental conditions is fundamental in current plant biotechnology research programs for the understanding and development of stress-tolerant plants. In this review, we describe recent applications of metabolomics and emphasize its increasing application to study plant responses to environmental (stress-) factors, including drought, salt, low oxygen caused by waterlogging or flooding of the soil, temperature, light and oxidative stress (or a combination of them). Advances in understanding the global changes occurring in plant metabolism under specific abiotic stress conditions are fundamental to enhance plant fitness and increase stress tolerance. © 2015 Wiley Periodicals, Inc. Mass Spec Rev 35:620-649, 2016.
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Affiliation(s)
- Tiago F Jorge
- Plant Metabolomics Laboratory, Instituto de Tecnologia Química e Biológica António Xavier-Universidade Nova de Lisboa (ITQB-UNL), Avenida República, 2780-157, Oeiras, Portugal
| | - João A Rodrigues
- Instituto de Medicina Molecular, Faculdade de Medicina da Universidade de Lisboa, Avenida Professor Egas Moniz, 1649-028, Lisboa, Portugal
| | - Camila Caldana
- Max-Planck-partner group at the Brazilian Bioethanol Science and Technology Laboratory/CNPEM, 13083-970, Campinas-SP, Brazil
| | - Romy Schmidt
- Institute of Biology I, RWTH Aachen University, Worringerweg 1, 52074, Aachen, Germany
| | - Joost T van Dongen
- Institute of Biology I, RWTH Aachen University, Worringerweg 1, 52074, Aachen, Germany
| | - Jane Thomas-Oates
- Jane Thomas-Oates, Centre of Excellence in Mass Spectrometry, and Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK
| | - Carla António
- Plant Metabolomics Laboratory, Instituto de Tecnologia Química e Biológica António Xavier-Universidade Nova de Lisboa (ITQB-UNL), Avenida República, 2780-157, Oeiras, Portugal
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25
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Zienkiewicz M, Drożak A, Wasilewska W, Bacławska I, Przedpełska-Wąsowicz E, Romanowska E. The short-term response of Arabidopsis thaliana (C3) and Zea mays (C4) chloroplasts to red and far red light. PLANTA 2015; 242:1479-93. [PMID: 26318309 DOI: 10.1007/s00425-015-2392-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Accepted: 08/24/2015] [Indexed: 05/05/2023]
Abstract
Light quality has various effects on photochemistry and protein phosphorylation in Zea mays and Arabidopsis thaliana thylakoids due to different degrees of light penetration across leaves and redox status in chloroplasts. The effect of the spectral quality of light (red, R and far red, FR) on the function of thylakoid proteins in Zea mays and Arabidopsis thaliana was investigated. It was concluded that red light stimulates PSII activity in A. thaliana thylakoids and in maize bundle sheath (BS) thylakoids, but not in mesophyll (M) thylakoids. The light quality did not change PSI activity in M thylakoids of maize. FR used after a white light period increased PSI activity significantly in maize BS and only slightly in A. thaliana thylakoids. As shown by blue native (BN)-PAGE followed by SDS-PAGE, proteins were differently phosphorylated in the thylakoids, indicating their different functions. FR light increased dephosphorylation of LHCII proteins in A. thaliana thylakoids, whereas in maize, dephosphorylation did not occur at all. The rate of phosphorylation was higher in maize BS than in M thylakoids. D1 protein phosphorylation increased in maize and decreased in A. thaliana upon irradiation with both R and growth light (white light, W). Light variations did not change the level of proteins in thylakoids. Our data strongly suggest that response to light quality is a species-dependent phenomenon. We concluded that the maize chloroplasts were differently stimulated, probably due to different degrees of light penetration across the leaf and thereby the redox status in the chloroplasts. These acclimation changes induced by light quality are important in the regulation of chloroplast membrane flexibility and thus its function.
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Affiliation(s)
- Maksymilian Zienkiewicz
- Department of Molecular Plant Physiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096, Warsaw, Poland
| | - Anna Drożak
- Department of Molecular Plant Physiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096, Warsaw, Poland
| | - Wioleta Wasilewska
- Department of Molecular Plant Physiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096, Warsaw, Poland
| | - Ilona Bacławska
- Department of Molecular Plant Physiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096, Warsaw, Poland
| | - Ewa Przedpełska-Wąsowicz
- Department of Molecular Plant Physiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096, Warsaw, Poland
| | - Elżbieta Romanowska
- Department of Molecular Plant Physiology, Faculty of Biology, University of Warsaw, Miecznikowa 1, 02-096, Warsaw, Poland.
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26
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Dietzel L, Gläßer C, Liebers M, Hiekel S, Courtois F, Czarnecki O, Schlicke H, Zubo Y, Börner T, Mayer K, Grimm B, Pfannschmidt T. Identification of Early Nuclear Target Genes of Plastidial Redox Signals that Trigger the Long-Term Response of Arabidopsis to Light Quality Shifts. MOLECULAR PLANT 2015; 8:1237-52. [PMID: 25778986 DOI: 10.1016/j.molp.2015.03.004] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2014] [Revised: 03/06/2015] [Accepted: 03/08/2015] [Indexed: 05/20/2023]
Abstract
Natural illumination conditions are highly variable and because of their sessile life style, plants are forced to acclimate to them at the cellular and molecular level. Changes in light intensity or quality induce changes in the reduction/oxidation (redox) state of the photosynthetic electron chain that acts as a trigger for compensatory acclimation responses comprising functional and structural adjustments of photosynthesis and metabolism. Such responses include redox-controlled changes in plant gene expression in the nucleus and organelles. Here we describe a strategy for the identification of early redox-regulated genes (ERGs) in the nucleus of the model organism Arabidopsis thaliana that respond significantly 30 or 60 min after the generation of a reduction signal in the photosynthetic electron transport chain. By comparing the response of wild-type plants with that of the acclimation mutant stn7, we could specifically identify ERGs. The results reveal a significant impact of chloroplast redox signals on distinct nuclear gene groups including genes for the mitochondrial electron transport chain, tetrapyrrole biosynthesis, carbohydrate metabolism, and signaling lipid synthesis. These expression profiles are clearly different from those observed in response to the reduction of photosynthetic electron transport by high light treatments. Thus, the ERGs identified are unique to redox imbalances in photosynthetic electron transport and were then used for analyzing potential redox-responsive cis-elements, trans-factors, and chromosomal regulatory hot spots. The data identify a novel redox-responsive element and indicate extensive redox control at transcriptional and chromosomal levels that point to an unprecedented impact of redox signals on epigenetic processes.
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Affiliation(s)
- Lars Dietzel
- Department of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University of Jena, Dornburger Strasse 159, 07743 Jena, Germany; Present address: Institut für Molekulare Biowissenschaften, Pflanzliche Zellphysiologie, Max-von-Laue-Strasse 9, Biozentrum Goethe-Universität Frankfurt, 60438 Frankfurt am Main, Germany
| | - Christine Gläßer
- MIPS/IBI, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Ingolstädter Landstrasse 1, 85764 Neuherberg, Germany; Present address: Zentrum für Molekulare Biologie an der Universität zu Heidelberg (ZMBH), Im Neuenheimer Feld 282, 69120 Heidelberg, Germany
| | - Monique Liebers
- Department of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University of Jena, Dornburger Strasse 159, 07743 Jena, Germany; Present address: Université Grenoble-Alpes, F-38000 Grenoble, France; Present address: CNRS, UMR5168, F-38054 Grenoble, France; Present address: CEA, iRTSV, Laboratoire de Physiologie Cellulaire & Végétale, F-38054 Grenoble, France; Present address: INRA, USC1359, F-38054 Grenoble, France
| | - Stefan Hiekel
- Department of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University of Jena, Dornburger Strasse 159, 07743 Jena, Germany; Present address: Plant Reproductive Biology Group, Department of Physiology and Cell-Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), OT Gatersleben, Corrensstrasse 3, D-06466 Stadt Seeland, Germany
| | - Florence Courtois
- Present address: Université Grenoble-Alpes, F-38000 Grenoble, France; Present address: CNRS, UMR5168, F-38054 Grenoble, France; Present address: CEA, iRTSV, Laboratoire de Physiologie Cellulaire & Végétale, F-38054 Grenoble, France; Present address: INRA, USC1359, F-38054 Grenoble, France
| | - Olaf Czarnecki
- Institute of Biology/Plant Physiology, Humboldt-University Berlin, Philippstrasse 13, Building 12, 10115 Berlin, Germany; Present address: KWS Saat AG, Grimsehlstrasse 31, 37555 Einbeck, Germany
| | - Hagen Schlicke
- Institute of Biology/Plant Physiology, Humboldt-University Berlin, Philippstrasse 13, Building 12, 10115 Berlin, Germany
| | - Yan Zubo
- Institute of Biology, Genetics, Humboldt-University Berlin, Chausseestrasse 117, 10115 Berlin, Germany; Present address: Dartmouth College, Department of Biological Sciences, Life Sciences Center, 78 College Street, Hanover, NH 03755, USA
| | - Thomas Börner
- Institute of Biology, Genetics, Humboldt-University Berlin, Chausseestrasse 117, 10115 Berlin, Germany
| | - Klaus Mayer
- MIPS/IBI, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Ingolstädter Landstrasse 1, 85764 Neuherberg, Germany
| | - Bernhard Grimm
- Institute of Biology/Plant Physiology, Humboldt-University Berlin, Philippstrasse 13, Building 12, 10115 Berlin, Germany
| | - Thomas Pfannschmidt
- Department of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University of Jena, Dornburger Strasse 159, 07743 Jena, Germany; Present address: Université Grenoble-Alpes, F-38000 Grenoble, France; Present address: CNRS, UMR5168, F-38054 Grenoble, France; Present address: CEA, iRTSV, Laboratoire de Physiologie Cellulaire & Végétale, F-38054 Grenoble, France; Present address: INRA, USC1359, F-38054 Grenoble, France.
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27
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Gläßer C, Haberer G, Finkemeier I, Pfannschmidt T, Kleine T, Leister D, Dietz KJ, Häusler RE, Grimm B, Mayer KFX. Meta-analysis of retrograde signaling in Arabidopsis thaliana reveals a core module of genes embedded in complex cellular signaling networks. MOLECULAR PLANT 2014; 7:1167-90. [PMID: 24719466 DOI: 10.1093/mp/ssu042] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Plastid-to-nucleus signaling is essential for the coordination and adjustment of cellular metabolism in response to environmental and developmental cues of plant cells. A variety of operational retrograde signaling pathways have been described that are thought to be triggered by reactive oxygen species, photosynthesis redox imbalance, tetrapyrrole intermediates, and other metabolic traits. Here we report a meta-analysis based on transcriptome and protein interaction data. Comparing the output of these pathways reveals the commonalities and peculiarities stimulated by six different sources impinging on operational retrograde signaling. Our study provides novel insights into the interplay of these pathways, supporting the existence of an as-yet unknown core response module of genes being regulated under all conditions tested. Our analysis further highlights affiliated regulatory cis-elements and classifies abscisic acid and auxin-based signaling as secondary components involved in the response cascades following a plastidial signal. Our study provides a global analysis of structure and interfaces of different pathways involved in plastid-to-nucleus signaling and a new view on this complex cellular communication network.
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Affiliation(s)
- Christine Gläßer
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Bioinformatics and Systems Biology (IBIS), Ingolstädter Landstr. 1, D-85764 Neuherberg, Germany
| | - Georg Haberer
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Bioinformatics and Systems Biology (IBIS), Ingolstädter Landstr. 1, D-85764 Neuherberg, Germany
| | - Iris Finkemeier
- Biozentrum der LMU München, Department of Biologie I-Botanik, Großhaderner Str. 2-4, D-82152 Planegg-Martinsried, Germany
| | - Thomas Pfannschmidt
- Friedrich-Schiller-Universität Jena, Institut für Allgemeine Botanik und Pflanzenphysiologie, Dornburger Str. 159, D-07743 Jena, Germany Laboratoire de Physiologie Cellulaire Végétale (LPCV), CEA/CNRS/UJF iRTSV, CEA Grenoble 17, rue des Martyrs, 38054 Grenoble cedex 9, France
| | - Tatjana Kleine
- Biozentrum der LMU München, Department of Biologie I-Botanik, Großhaderner Str. 2-4, D-82152 Planegg-Martinsried, Germany
| | - Dario Leister
- Biozentrum der LMU München, Department of Biologie I-Botanik, Großhaderner Str. 2-4, D-82152 Planegg-Martinsried, Germany
| | - Karl-Josef Dietz
- Biochemistry and Physiology of Plants, Faculty of Biology, Bielefeld University, Universitätsstraße 25, D-33615 Bielefeld, Germany
| | - Rainer Erich Häusler
- University of Cologne, Botanical Institute, Cologne Biocenter, Zülpicher Str. 47B, D-50674 Cologne, Germany
| | - Bernhard Grimm
- Humboldt-Universität zu Berlin, Institut für Biologie, AG Pflanzenphysiologie, Philippstrasse 13, D-10115 Berlin, Germany
| | - Klaus Franz Xaver Mayer
- Helmholtz Zentrum München, German Research Center for Environmental Health, Institute of Bioinformatics and Systems Biology (IBIS), Ingolstädter Landstr. 1, D-85764 Neuherberg, Germany
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28
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Michal Johnson J, Reichelt M, Vadassery J, Gershenzon J, Oelmüller R. An Arabidopsis mutant impaired in intracellular calcium elevation is sensitive to biotic and abiotic stress. BMC PLANT BIOLOGY 2014; 14:162. [PMID: 24920452 PMCID: PMC4074868 DOI: 10.1186/1471-2229-14-162] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2014] [Accepted: 05/29/2014] [Indexed: 05/05/2023]
Abstract
BACKGROUND Ca2+, a versatile intracellular second messenger in various signaling pathways, initiates many responses involved in growth, defense and tolerance to biotic and abiotic stress. Endogenous and exogenous signals induce cytoplasmic Ca2+ ([Ca2+]cyt) elevation, which are responsible for the appropriate downstream responses. RESULTS Here we report on an ethyl-methane sulfonate-mediated Arabidopsis mutant that fails to induce [Ca2+]cyt elevation in response to exudate preparations from the pathogenic mibrobes Alternaria brassicae, Rhizoctonia solani, Phytophthora parasitica var. nicotianae and Agrobacterium tumefaciens. The cytoplasmic Ca2+elevation mutant1 (cycam1) is susceptible to infections by A. brassicae, its toxin preparation and sensitive to abiotic stress such as drought and salt. It accumulates high levels of reactive oxygen species and contains elevated salicylic acid, abscisic acid and bioactive jasmonic acid iso-leucine levels. Reactive oxygen species- and phytohormone-related genes are higher in A. brassicae-treated wild-type and mutant seedlings. Depending on the analysed response, the elevated levels of defense-related compounds are either caused by the cycam mutation and are promoted by the pathogen, or they are mainly due to the pathogen infection or application of pathogen-associated molecular patterns. Furthermore, cycam1 shows altered responses to abscisic acid treatments: the hormone inhibits germination and growth of the mutant. CONCLUSIONS We isolated an Arabidopsis mutant which fails to induce [Ca2+]cyt elevation in response to exudate preparations from various microbes. The higher susceptibility of the mutant to pathogen infections correlates with the higher accumulation of defense-related compounds, such as phytohormones, reactive oxygen-species, defense-related mRNA levels and secondary metabolites. Therefore, CYCAM1 couples [Ca2+]cyt elevation to biotic, abiotic and oxidative stress responses.
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Affiliation(s)
- Joy Michal Johnson
- Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, Dornburger Str. 159, 07743 Jena, Germany
| | - Michael Reichelt
- Max Planck Institute for Chemical Ecology, Beutenberg Campus, Hans-Knöll-Straße 8, D-07745 Jena, Germany
| | - Jyothilakshmi Vadassery
- Max Planck Institute for Chemical Ecology, Beutenberg Campus, Hans-Knöll-Straße 8, D-07745 Jena, Germany
| | - Jonathan Gershenzon
- Max Planck Institute for Chemical Ecology, Beutenberg Campus, Hans-Knöll-Straße 8, D-07745 Jena, Germany
| | - Ralf Oelmüller
- Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, Dornburger Str. 159, 07743 Jena, Germany
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29
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Pantaleoni L, Longoni P, Ferroni L, Baldisserotto C, Leelavathi S, Reddy VS, Pancaldi S, Cella R. Chloroplast molecular farming: efficient production of a thermostable xylanase by Nicotiana tabacum plants and long-term conservation of the recombinant enzyme. PROTOPLASMA 2014; 251:639-48. [PMID: 24158375 DOI: 10.1007/s00709-013-0564-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2013] [Accepted: 10/04/2013] [Indexed: 05/10/2023]
Abstract
The high cost of recombinant enzymes for the production of biofuel from ligno-cellulosic biomass is a crucial factor affecting the economic sustainability of the process. The use of plants as biofactories for the production of the suitable recombinant enzymes might be an alternative to microbial fermentation. In the case of enzyme accumulation in chloroplasts, it is fundamental to focus on the issue of full photosynthetic efficiency of transplastomic plants in the field where they might be exposed to abiotic stress such as high light intensity and high temperature. Xylanases (EC 3.2.1.8), a group of enzymes that hydrolyse linear polysaccharides of beta-1,4-xylan into xylose, find an application in the biofuel industry favouring biomass saccharification along with other cell-wall degrading enzymes. In the present study, we analysed how a high level of accumulation of a thermostable xylanase in tobacco chloroplasts does not impact on photosynthetic performance of transplastomic plants grown outdoors. The recombinant enzyme was found to be stable during plant development, ex planta and after long-term storage.
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Affiliation(s)
- Laura Pantaleoni
- Department of Biology and Biotechnology, University of Pavia, Via Ferrata 9, 27100, Pavia, Italy
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Vahabi K, Camehl I, Sherameti I, Oelmüller R. Growth of Arabidopsis seedlings on high fungal doses of Piriformospora indica has little effect on plant performance, stress, and defense gene expression in spite of elevated jasmonic acid and jasmonic acid-isoleucine levels in the roots. PLANT SIGNALING & BEHAVIOR 2013; 8:e26301. [PMID: 24047645 PMCID: PMC4091356 DOI: 10.4161/psb.26301] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
The endophytic fungus Piriformospora indica colonizes the roots of many plant species including Arabidopsis and promotes their performance, biomass, and seed production as well as resistance against biotic and abiotic stress. Imbalances in the symbiotic interaction such as uncontrolled fungal growth result in the loss of benefits for the plants and activation of defense responses against the microbe. We exposed Arabidopsis seedlings to a dense hyphal lawn of P. indica. The seedlings continue to grow, accumulate normal amounts of chlorophyll, and the photosynthetic parameters demonstrate that they perform well. In spite of high fungal doses around the roots, the fungal material inside the roots was not significantly higher when compared with roots that live in a beneficial symbiosis with P. indica. Fifteen defense- and stress-related genes including PR2, PR3, PAL2, and ERF1 are only moderately upregulated in the roots on the fungal lawn, and the seedlings did not accumulate H2O2/radical oxygen species. However, accumulation of anthocyanin in P. indica-exposed seedlings indicates stress symptoms. Furthermore, the jasmonic acid (JA) and jasmonic acid-isoleucine (JA-Ile) levels were increased in the roots, and consequently PDF1.2 and a newly characterized gene for a 2-oxoglurate and Fe2+ -dependent oxygenase were upregulated more than 7-fold on the dense fungal lawn, in a JAR1- and EIN3-dependent manner. We conclude that growth of A. thaliana seedlings on high fungal doses of P. indica has little effect on the overall performance of the plants although elevated JA and JA-Ile levels in the roots induce a mild stress or defense response.
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31
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Albrecht-Borth V, Kauss D, Fan D, Hu Y, Collinge D, Marri S, Liebers M, Apel K, Pfannschmidt T, Chow WS, Pogson BJ. A novel proteinase, SNOWY COTYLEDON4, is required for photosynthetic acclimation to higher light intensities in Arabidopsis. PLANT PHYSIOLOGY 2013; 163:732-45. [PMID: 23940253 PMCID: PMC3793054 DOI: 10.1104/pp.113.216036] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2013] [Accepted: 08/12/2013] [Indexed: 05/02/2023]
Abstract
Excess light can have a negative impact on photosynthesis; thus, plants have evolved many different ways to adapt to different light conditions to both optimize energy use and avoid damage caused by excess light. Analysis of the Arabidopsis (Arabidopsis thaliana) mutant snowy cotyledon4 (sco4) revealed a mutation in a chloroplast-targeted protein that shares limited homology with CaaX-type endopeptidases. The SCO4 protein possesses an important function in photosynthesis and development, with point mutations rendering the seedlings and adult plants susceptible to photooxidative stress. The sco4 mutation impairs the acclimation of chloroplasts and their photosystems to excess light, evidenced in a reduction in photosystem I function, decreased linear electron transfer, yet increased nonphotochemical quenching. SCO4 is localized to the chloroplasts, which suggests the existence of an unreported type of protein modification within this organelle. Phylogenetic and yeast complementation analyses of SCO4-like proteins reveal that SCO4 is a member of an unknown group of higher plant-specific proteinases quite distinct from the well-described CaaX-type endopeptidases RAS Converting Enzyme1 (RCE1) and zinc metallopeptidase STE24 and lacks canonical CaaX activity. Therefore, we hypothesize that SCO4 is a novel endopeptidase required for critical protein modifications within chloroplasts, influencing the function of proteins involved in photosynthesis required for tolerance to excess light.
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Affiliation(s)
| | - Dominika Kauss
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Dayong Fan
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Yuanyuan Hu
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Derek Collinge
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Shashikanth Marri
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Monique Liebers
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | | | - Thomas Pfannschmidt
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Wah S. Chow
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
| | - Barry J. Pogson
- Australian Research Council Centre of Excellence in Plant Energy Biology (V.A.-B., D.C., S.M., B.J.P.) and Research School of Biology (D.F., Y.H., W.S.C.), Australian National University Canberra, Acton, Australian Capital Territory 0200, Australia
- Institute of Plant Sciences, Eidgenössisch Technische Hochschule Zurich, 8092 Zurich, Switzerland (D.K., K.A.); and
- Université Grenoble-Alpes, Laboratoire de Physiologie Cellulaire and Végétale, Commissariat à l’Energie Atomique, 38054 Grenoble, France (M.L., T.P.)
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Guo J, Wei X, Li M, Pan X, Chang W, Liu Z. Structure of the catalytic domain of a state transition kinase homolog from Micromonas algae. Protein Cell 2013; 4:607-19. [PMID: 23794031 DOI: 10.1007/s13238-013-3034-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2013] [Accepted: 05/27/2013] [Indexed: 11/28/2022] Open
Abstract
Under natural environments, plants and algae have evolved various photosynthetic acclimation mechanisms in response to the constantly changing light conditions. The state transition and long-term response processes in photosynthetic acclimation involve remodeling and composition alteration of thylakoid membrane. A chloroplast protein kinase named Stt7/STN7 has been found to have pivotal roles in both state transition and long-term response. Here we report the crystal structures of the kinase domain of a putative Stt7/STN7 homolog from Micromonas sp. RCC299 (MsStt7d) in the apo form and in complex with various nucleotide substrates. MsStt7d adopts a canonical protein kinase fold and contains all the essential residues at the active site. A novel hairpin motif, found to be a conserved feature of the Stt7/STN7 family and indispensable for the kinase stability, interacts with the activation loop and fixes it in an active conformation. We have also demonstrated that MsStt7d is a dualspecifi city kinase that phosphorylates both Thr and Tyr residues. Moreover, preliminary in vitro data suggest that it might be capable of phosphorylating a consensus N-terminal pentapeptide of light-harvesting proteins Micromonas Lhcp4 and Arabidopsis Lhcb1 directly. The potential peptide/protein substrate binding site is predicted based on the location of a pseudo-substrate contributed by the adjacent molecule within the crystallographic dimer. The structural and biochemical data presented here provide a framework for an improved understanding on the role of Stt7/STN7 in photosynthetic acclimation.
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Affiliation(s)
- Jiangtao Guo
- National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China
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Wituszyńska W, Gałązka K, Rusaczonek A, Vanderauwera S, Van Breusegem F, Karpiński S. Multivariable environmental conditions promote photosynthetic adaptation potential in Arabidopsis thaliana. JOURNAL OF PLANT PHYSIOLOGY 2013; 170:548-59. [PMID: 23287000 DOI: 10.1016/j.jplph.2012.11.016] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2012] [Revised: 11/17/2012] [Accepted: 11/21/2012] [Indexed: 05/20/2023]
Abstract
Most of our knowledge on the regulation of photosynthesis originates from studies performed in highly controlled laboratory conditions. However, in their natural habitats plants are simultaneously subjected to a broad range of abiotic and biotic stimuli which influence photosynthetic efficiency; hence there is an emerging need to examine the process of photosynthesis under multivariable field conditions in order to elucidate the mechanisms that underlie its regulation. Such knowledge has potential for providing novel targets that would improve both crop yield and performance. In the present study we compared laboratory- and field-grown Arabidopsis thaliana plants in terms of photosynthetic efficiency in modulated light intensities and CO2 concentrations. We show here that the field-acclimated plants display highly efficient photosynthesis and are more tolerant to variable light intensities and CO2 concentrations than their laboratory-grown counterparts. We also demonstrate that some structural rearrangements of LHCII and PSII, together with altered pigments composition and stomatal density, are responsible for the differences in assimilation and photochemistry. Furthermore, we employ a transcript profiling approach to explain the genetic mechanisms underlying these adaptations and suggest that they are mainly induced by the high and fluctuating light intensities which occur in the natural environment.
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Affiliation(s)
- Weronika Wituszyńska
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture and Landscape Architecture, Warsaw University of Life Sciences, Nowoursynowska Street 159, 02-776 Warszawa, Poland
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Wunder T, Liu Q, Aseeva E, Bonardi V, Leister D, Pribil M. Control of STN7 transcript abundance and transient STN7 dimerisation are involved in the regulation of STN7 activity. PLANTA 2013; 237:541-58. [PMID: 23086342 DOI: 10.1007/s00425-012-1775-y] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2012] [Accepted: 09/14/2012] [Indexed: 05/25/2023]
Abstract
Reversible phosphorylation of LHCII, the light-harvesting complex of photosystem II, controls its migration between the two photosystems (state transitions), and serves to adapt the photosynthetic machinery of plants and green algae to short-term changes in ambient light conditions. The thylakoid kinase STN7 is required for LHCII phosphorylation and state transitions in vascular plants. Regulation of STN7 levels occurs at the post-translational level, depends on the thylakoid redox state, and might involve reversible autophosphorylation. Here, we have analysed the effects of different light conditions and chemical inhibitors on the abundance of STN7 transcripts and their products. This analysis was performed in wild-type Arabidopsis thaliana plants, in several photosynthetic mutants, and in lines overexpressing STN7 (oeSTN7) or expressing mutant variants of STN7 carrying single or double cysteine-serine exchanges. It was found that accumulation of the STN7 protein is also controlled at the level of transcript abundance. Under certain conditions, exposure to high light or far-red light treatment, the relative decreases in LHCII phosphorylation can be attributed to decreases in STN7 abundance. Nevertheless, inhibitor experiments showed that redox control of LHCII kinase activity persists in oeSTN7 plants. STN7 dimers were found in oeSTN7 plants and in lines with single cysteine-serine exchanges, indicating that dimerisation involves disulphide bridges. We speculate that transient STN7 dimerisation is required for STN7 activity, and that the altered dimerisation behaviour of oeSTN7 plants might be responsible for the unusually high phosphorylation of LHCII in the dark found in this genotype.
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Affiliation(s)
- Tobias Wunder
- Department Biology I, Ludwig-Maximilians-University Munich (LMU), Plant Molecular Biology (Botany), Großhaderner Strasse 2, Planegg-Martinsried, Germany
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Hirth M, Dietzel L, Steiner S, Ludwig R, Weidenbach H, and JP, Pfannschmidt T. Photosynthetic acclimation responses of maize seedlings grown under artificial laboratory light gradients mimicking natural canopy conditions. FRONTIERS IN PLANT SCIENCE 2013; 4:334. [PMID: 24062753 PMCID: PMC3770919 DOI: 10.3389/fpls.2013.00334] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2013] [Accepted: 08/08/2013] [Indexed: 05/20/2023]
Abstract
In this study we assessed the ability of the C4 plant maize to perform long-term photosynthetic acclimation in an artificial light quality system previously used for analyzing short-term and long-term acclimation responses (LTR) in C3 plants. We aimed to test if this light system could be used as a tool for analyzing redox-regulated acclimation processes in maize seedlings. Photosynthetic parameters obtained from maize samples harvested in the field were used as control. The results indicated that field grown maize performed a pronounced LTR with significant differences between the top and the bottom levels of the plant stand corresponding to the strong light gradients occurring in it. We compared these data to results obtained from maize seedlings grown under artificial light sources preferentially exciting either photosystem II or photosystem I. In C3 plants, this light system induces redox signals within the photosynthetic electron transport chain which trigger state transitions and differential phosphorylation of LHCII (light harvesting complexes of photosystem II). The LTR to these redox signals induces changes in the accumulation of plastid psaA transcripts, in chlorophyll (Chl) fluorescence values F \rm s/F \rm m, in Chl a/b ratios and in transient starch accumulation in C3 plants. Maize seedlings grown in this light system exhibited a pronounced ability to perform both short-term and long-term acclimation at the level of psaA transcripts, Chl fluorescence values F \rm s/F \rm m and Chl a/b ratios. Interestingly, maize seedlings did not exhibit redox-controlled variations of starch accumulation probably because of its specific differences in energy metabolism. In summary, the artificial laboratory light system was found to be well-suited to mimic field light conditions and provides a physiological tool for studying the molecular regulation of the LTR of maize in more detail.
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Affiliation(s)
- Matthias Hirth
- Present address: Matthias Hirth, Institut für Allgemeine Botanik und Pflanzenphysiologie, Professur für Molekulare Botanik, Friedrich-Schiller-Universität Jena, Dornburger Straße 159, Jena 07743, Germany; Lars Dietzel, Institut für Molekulare Biowissenschaften, Pflanzliche Zellphysiologie, Biozentrum Goethe-Universität Frankfurt, Max-von-Laue-Straße 9, Frankfurt am Main 60438, Germany; Sebastian Steiner, Klein Wanzlebener Saatzucht Saat AG, Grimsehlstraße 31, Einbeck 37574, Germany; Robert Ludwig, Institut für Diagnostische und Interventionelle Radiologie I — AG Experimentelle Radiologie, Universitätsklinikum Jena — Friedrich-Schiller Universität Jena, Erlanger Allee 101, Jena 07747, Germany; Thomas Pfannschmidt, Laboratoire de Physiologie Cellulaire & Végétale, Univ. Grenoble Alpes, 17 rue des Martyrs, Grenoble F-38054, France
| | - Lars Dietzel
- Present address: Matthias Hirth, Institut für Allgemeine Botanik und Pflanzenphysiologie, Professur für Molekulare Botanik, Friedrich-Schiller-Universität Jena, Dornburger Straße 159, Jena 07743, Germany; Lars Dietzel, Institut für Molekulare Biowissenschaften, Pflanzliche Zellphysiologie, Biozentrum Goethe-Universität Frankfurt, Max-von-Laue-Straße 9, Frankfurt am Main 60438, Germany; Sebastian Steiner, Klein Wanzlebener Saatzucht Saat AG, Grimsehlstraße 31, Einbeck 37574, Germany; Robert Ludwig, Institut für Diagnostische und Interventionelle Radiologie I — AG Experimentelle Radiologie, Universitätsklinikum Jena — Friedrich-Schiller Universität Jena, Erlanger Allee 101, Jena 07747, Germany; Thomas Pfannschmidt, Laboratoire de Physiologie Cellulaire & Végétale, Univ. Grenoble Alpes, 17 rue des Martyrs, Grenoble F-38054, France
| | - Sebastian Steiner
- Present address: Matthias Hirth, Institut für Allgemeine Botanik und Pflanzenphysiologie, Professur für Molekulare Botanik, Friedrich-Schiller-Universität Jena, Dornburger Straße 159, Jena 07743, Germany; Lars Dietzel, Institut für Molekulare Biowissenschaften, Pflanzliche Zellphysiologie, Biozentrum Goethe-Universität Frankfurt, Max-von-Laue-Straße 9, Frankfurt am Main 60438, Germany; Sebastian Steiner, Klein Wanzlebener Saatzucht Saat AG, Grimsehlstraße 31, Einbeck 37574, Germany; Robert Ludwig, Institut für Diagnostische und Interventionelle Radiologie I — AG Experimentelle Radiologie, Universitätsklinikum Jena — Friedrich-Schiller Universität Jena, Erlanger Allee 101, Jena 07747, Germany; Thomas Pfannschmidt, Laboratoire de Physiologie Cellulaire & Végétale, Univ. Grenoble Alpes, 17 rue des Martyrs, Grenoble F-38054, France
| | - Robert Ludwig
- Present address: Matthias Hirth, Institut für Allgemeine Botanik und Pflanzenphysiologie, Professur für Molekulare Botanik, Friedrich-Schiller-Universität Jena, Dornburger Straße 159, Jena 07743, Germany; Lars Dietzel, Institut für Molekulare Biowissenschaften, Pflanzliche Zellphysiologie, Biozentrum Goethe-Universität Frankfurt, Max-von-Laue-Straße 9, Frankfurt am Main 60438, Germany; Sebastian Steiner, Klein Wanzlebener Saatzucht Saat AG, Grimsehlstraße 31, Einbeck 37574, Germany; Robert Ludwig, Institut für Diagnostische und Interventionelle Radiologie I — AG Experimentelle Radiologie, Universitätsklinikum Jena — Friedrich-Schiller Universität Jena, Erlanger Allee 101, Jena 07747, Germany; Thomas Pfannschmidt, Laboratoire de Physiologie Cellulaire & Végétale, Univ. Grenoble Alpes, 17 rue des Martyrs, Grenoble F-38054, France
| | | | | | - Thomas Pfannschmidt
- *Correspondence: Thomas Pfannschmidt, Laboratoire de Physiologie Cellulaire & Végétale, Univ. Grenoble Alpes, 17 rue des Martyrs, F-38054 Grenoble, France e-mail:
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Wunder T, Xu W, Liu Q, Wanner G, Leister D, Pribil M. The major thylakoid protein kinases STN7 and STN8 revisited: effects of altered STN8 levels and regulatory specificities of the STN kinases. FRONTIERS IN PLANT SCIENCE 2013; 4:417. [PMID: 24151498 PMCID: PMC3801152 DOI: 10.3389/fpls.2013.00417] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2013] [Accepted: 10/01/2013] [Indexed: 05/19/2023]
Abstract
Thylakoid phosphorylation is predominantly mediated by the protein kinases STN7 and STN8. While STN7 primarily catalyzes LHCII phosphorylation, which enables LHCII to migrate from photosystem (PS) II to PSI, STN8 mainly phosphorylates PSII core proteins. The reversible phosphorylation of PSII core proteins is thought to regulate the PSII repair cycle and PSII supercomplex stability, and play a role in modulating the folding of thylakoid membranes. Earlier studies clearly demonstrated a considerable substrate overlap between the two STN kinases, raising the possibility of a balanced interdependence between them at either the protein or activity level. Here, we show that such an interdependence of the STN kinases on protein level does not seem to exist as neither knock-out nor overexpression of STN7 or STN8 affects accumulation of the other. STN7 and STN8 are both shown to be integral thylakoid proteins that form part of molecular supercomplexes, but exhibit different spatial distributions and are subject to different modes of regulation. Evidence is presented for the existence of a second redox-sensitive motif in STN7, which seems to be targeted by thioredoxin f. Effects of altered STN8 levels on PSII core phosphorylation, supercomplex formation, photosynthetic performance and thylakoid ultrastructure were analyzed in Arabidopsis thaliana using STN8-overexpressing plants (oeSTN8). In general, oeSTN8 plants were less sensitive to intense light and exhibited changes in thylakoid ultrastructure, with grana stacks containing more layers and reduced amounts of PSII supercomplexes. Hence, we conclude that STN8 acts in an amount-dependent manner similar to what was shown for STN7 in previous studies. However, the modes of regulation of the STN kinases appear to differ significantly.
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Affiliation(s)
- Tobias Wunder
- Plant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
| | - Wenteng Xu
- Plant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
| | - Qiuping Liu
- Plant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
| | - Gerhard Wanner
- Ultrastrukturforschung, Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
| | - Dario Leister
- Plant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
- PhotoLab Trentino - a Joint Initiative of the University of Trento (Centre for Integrative Biology) and the Edmund Mach Foundation (Research and Innovation Centre)San Michele all'Adige (Trento), Italy
- *Correspondence: Dario Leister, Plant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-Universität München, Großhaderner Str. 2, D-82152 Planegg-Martinsried, Germany e-mail:
| | - Mathias Pribil
- Plant Molecular Biology (Botany), Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
- Mass Spectrometry Unit, Department Biology I, Ludwig-Maximilians-Universität MünchenPlanegg-Martinsried, Germany
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Suorsa M, Grieco M, Järvi S, Gollan PJ, Kangasjärvi S, Tikkanen M, Aro EM. PGR5 ensures photosynthetic control to safeguard photosystem I under fluctuating light conditions. PLANT SIGNALING & BEHAVIOR 2013; 8:e22741. [PMID: 23221748 PMCID: PMC3745580 DOI: 10.4161/psb.22741] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2012] [Accepted: 11/01/2012] [Indexed: 05/19/2023]
Abstract
In a plant's natural environment, the intensity of light can change rapidly due to sunflecks, cloudiness and intermittent shading. Fluctuations between high and low illumination phases expose the photosynthetic machinery to rapidly changing signals that can be overlapping or contradictory, and accordingly plants have developed astute acclimation strategies to maintain optimal photosynthetic performance in these conditions. Continuous exposure to high light induces an array of protective mechanisms at anatomical, chemical and molecular levels, but when high light phases are short, such as under fluctuating light conditions, the protective strategies that afford protection to constant high light are not employed by plants. One mechanism that is engaged under both constant and fluctuating high light is the photosynthetic control of the Cyt b 6f complex, which prevents hyper-reduction of the electron transfer chain in order to protect PSI from photodamage. The PGR5 protein was recently shown to play an indispensable role in this protective mechanism. This review revisits the findings of earlier studies into photosynthetic control and places PGR5 within the broader context of photoprotection and light acclimation strategies.
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Pfannschmidt T, Yang C. The hidden function of photosynthesis: a sensing system for environmental conditions that regulates plant acclimation responses. PROTOPLASMA 2012; 249 Suppl 2:S125-36. [PMID: 22441589 DOI: 10.1007/s00709-012-0398-2] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2011] [Accepted: 03/12/2012] [Indexed: 05/03/2023]
Abstract
Plants convert light energy from the sun into chemical energy by photosynthesis. Since they are sessile, they have to deal with a wide range of conditions in their immediate environment. Many abiotic and biotic parameters exhibit considerable fluctuations which can have detrimental effects especially on the efficiency of photosynthetic light harvesting. During evolution, plants, therefore, evolved a number of acclimation processes which help them to adapt photosynthesis to such environmental changes. This includes protective mechanisms such as excess energy dissipation and processes supporting energy redistribution, e.g. state transitions or photosystem stoichiometry adjustment. Intriguingly, all these responses are triggered by photosynthesis itself via the interplay of its light reaction and the Calvin-Benson cycle with the residing environmental condition. Thus, besides its primary function in harnessing and converting light energy, photosynthesis acts as a sensing system for environmental changes that controls molecular acclimation responses which adapt the photosynthetic function to the environmental change. Important signalling parameters directly or indirectly affected by the environment are the pH gradient across the thylakoid membrane and the redox states of components of the photosynthetic electron transport chain and/or electron end acceptors coupled to it. Recent advances demonstrate that these signals control post-translational modifications of the photosynthetic protein complexes and also affect plastid and nuclear gene expression machineries as well as metabolic pathways providing a regulatory framework for an integrated response of the plant to the environment at all cellular levels.
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Affiliation(s)
- Thomas Pfannschmidt
- Junior Research Group Plant Acclimation To Environmental Changes, Protein Analysis by MS, Department of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, Dornburger Str 159, 07743 Jena, Germany.
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Brouwer B, Ziolkowska A, Bagard M, Keech O, Gardeström P. The impact of light intensity on shade-induced leaf senescence. PLANT, CELL & ENVIRONMENT 2012; 35:1084-98. [PMID: 22171633 DOI: 10.1111/j.1365-3040.2011.02474.x] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Plants often have to cope with altered light conditions, which in leaves induce various physiological responses ranging from photosynthetic acclimation to leaf senescence. However, our knowledge of the regulatory pathways by which shade and darkness induce leaf senescence remains incomplete. To determine to what extent reduced light intensities regulate the induction of leaf senescence, we performed a functional comparison between Arabidopsis leaves subjected to a range of shading treatments. Individually covered leaves, which remained attached to the plant, were compared with respect to chlorophyll, protein, histology, expression of senescence-associated genes, capacity for photosynthesis and respiration, and light compensation point (LCP). Mild shading induced photosynthetic acclimation and resource partitioning, which, together with a decreased respiration, lowered the LCP. Leaf senescence was induced only under strong shade, coinciding with a negative carbon balance and independent of the red/far-red ratio. Interestingly, while senescence was significantly delayed at very low light compared with darkness, phytochrome A mutant plants showed enhanced chlorophyll degradation under all shading treatments except complete darkness. Taken together, our results suggest that the induction of leaf senescence during shading depends on the efficiency of carbon fixation, which in turn appears to be modulated via light receptors such as phytochrome A.
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Affiliation(s)
- Bastiaan Brouwer
- Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden
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40
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Nevo R, Charuvi D, Tsabari O, Reich Z. Composition, architecture and dynamics of the photosynthetic apparatus in higher plants. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012; 70:157-76. [PMID: 22449050 DOI: 10.1111/j.1365-313x.2011.04876.x] [Citation(s) in RCA: 102] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
The process of oxygenic photosynthesis enabled and still sustains aerobic life on Earth. The most elaborate form of the apparatus that carries out the primary steps of this vital process is the one present in higher plants. Here, we review the overall composition and supramolecular organization of this apparatus, as well as the complex architecture of the lamellar system within which it is harbored. Along the way, we refer to the genetic, biochemical, spectroscopic and, in particular, microscopic studies that have been employed to elucidate the structure and working of this remarkable molecular energy conversion device. As an example of the highly dynamic nature of the apparatus, we discuss the molecular and structural events that enable it to maintain high photosynthetic yields under fluctuating light conditions. We conclude the review with a summary of the hypotheses made over the years about the driving forces that underlie the partition of the lamellar system of higher plants and certain green algae into appressed and non-appressed membrane domains and the segregation of the photosynthetic protein complexes within these domains.
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Affiliation(s)
- Reinat Nevo
- Department of Biological Chemistry, Weizmann Institute of Science, Rehovot, Israel
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Suzuki N, Koussevitzky S, Mittler R, Miller G. ROS and redox signalling in the response of plants to abiotic stress. PLANT, CELL & ENVIRONMENT 2012; 35:259-70. [PMID: 21486305 DOI: 10.1111/j.1365-3040.2011.02336.x] [Citation(s) in RCA: 814] [Impact Index Per Article: 67.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
The redox state of the chloroplast and mitochondria, the two main powerhouses of photosynthesizing eukaryotes, is maintained by a delicate balance between energy production and consumption, and affected by the need to avoid increased production of reactive oxygen species (ROS). These demands are especially critical during exposure to extreme environmental conditions, such as high light (HL) intensity, heat, drought or a combination of different environmental stresses. Under these conditions, ROS and redox cues, generated in the chloroplast and mitochondria, are essential for maintaining normal energy and metabolic fluxes, optimizing different cell functions, activating acclimation responses through retrograde signalling, and controlling whole-plant systemic signalling pathways. Regulation of the multiple redox and ROS signals in plants requires a high degree of coordination and balance between signalling and metabolic pathways in different cellular compartments. In this review, we provide an update on ROS and redox signalling in the context of abiotic stress responses, while addressing their role in retrograde regulation, systemic acquired acclimation and cellular coordination in plants.
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Affiliation(s)
- Nobuhiro Suzuki
- Department of Biological Sciences, University of North Texas, Denton, TX 76203, USA
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Bellasio C, Olejníčková J, Tesař R, Šebela D, Nedbal L. Computer reconstruction of plant growth and chlorophyll fluorescence emission in three spatial dimensions. SENSORS (BASEL, SWITZERLAND) 2012; 12:1052-71. [PMID: 22368511 PMCID: PMC3279255 DOI: 10.3390/s120101052] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2012] [Revised: 01/13/2012] [Accepted: 01/16/2012] [Indexed: 11/18/2022]
Abstract
Plant leaves grow and change their orientation as well their emission of chlorophyll fluorescence in time. All these dynamic plant properties can be semi-automatically monitored by a 3D imaging system that generates plant models by the method of coded light illumination, fluorescence imaging and computer 3D reconstruction. Here, we describe the essentials of the method, as well as the system hardware. We show that the technique can reconstruct, with a high fidelity, the leaf size, the leaf angle and the plant height. The method fails with wilted plants when leaves overlap obscuring their true area. This effect, naturally, also interferes when the method is applied to measure plant growth under water stress. The method is, however, very potent in capturing the plant dynamics under mild stress and without stress. The 3D reconstruction is also highly effective in correcting geometrical factors that distort measurements of chlorophyll fluorescence emission of naturally positioned plant leaves.
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Affiliation(s)
- Chandra Bellasio
- Department of Plant, Soil and Environmental Science, University of Firenze, Viale delle Idee, 30 50019-Sesto Fiorentino, Firenze, Italy
| | - Julie Olejníčková
- Global Change Research Centre, Academy of Sciences of the Czech Republic, Zámek 136, CZ-37333 Nové Hrady, Czech Republic; E-Mails: (J.O.); (R.T.); (D.S.); (L.N.)
| | - Radek Tesař
- Global Change Research Centre, Academy of Sciences of the Czech Republic, Zámek 136, CZ-37333 Nové Hrady, Czech Republic; E-Mails: (J.O.); (R.T.); (D.S.); (L.N.)
- Institute of Physical Biology, University of South Bohemia, Zámek 136, CZ-37333 Nové Hrady, Czech Republic
| | - David Šebela
- Global Change Research Centre, Academy of Sciences of the Czech Republic, Zámek 136, CZ-37333 Nové Hrady, Czech Republic; E-Mails: (J.O.); (R.T.); (D.S.); (L.N.)
- Institute of Physical Biology, University of South Bohemia, Zámek 136, CZ-37333 Nové Hrady, Czech Republic
| | - Ladislav Nedbal
- Global Change Research Centre, Academy of Sciences of the Czech Republic, Zámek 136, CZ-37333 Nové Hrady, Czech Republic; E-Mails: (J.O.); (R.T.); (D.S.); (L.N.)
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Schmitz J, Schöttler MA, Krueger S, Geimer S, Schneider A, Kleine T, Leister D, Bell K, Flügge UI, Häusler RE. Defects in leaf carbohydrate metabolism compromise acclimation to high light and lead to a high chlorophyll fluorescence phenotype in Arabidopsis thaliana. BMC PLANT BIOLOGY 2012; 12:8. [PMID: 22248311 PMCID: PMC3353854 DOI: 10.1186/1471-2229-12-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2011] [Accepted: 01/16/2012] [Indexed: 05/18/2023]
Abstract
BACKGROUND We have studied the impact of carbohydrate-starvation on the acclimation response to high light using Arabidopsis thaliana double mutants strongly impaired in the day- and night path of photoassimilate export from the chloroplast. A complete knock-out mutant of the triose phosphate/phosphate translocator (TPT; tpt-2 mutant) was crossed to mutants defective in (i) starch biosynthesis (adg1-1, pgm1 and pgi1-1; knock-outs of ADP-glucose pyrophosphorylase, plastidial phosphoglucomutase and phosphoglucose isomerase) or (ii) starch mobilization (sex1-3, knock-out of glucan water dikinase) as well as in (iii) maltose export from the chloroplast (mex1-2). RESULTS All double mutants were viable and indistinguishable from the wild type when grown under low light conditions, but--except for sex1-3/tpt-2--developed a high chlorophyll fluorescence (HCF) phenotype and growth retardation when grown in high light. Immunoblots of thylakoid proteins, Blue-Native gel electrophoresis and chlorophyll fluorescence emission analyses at 77 Kelvin with the adg1-1/tpt-2 double mutant revealed that HCF was linked to a specific decrease in plastome-encoded core proteins of both photosystems (with the exception of the PSII component cytochrome b559), whereas nuclear-encoded antennae (LHCs) accumulated normally, but were predominantly not attached to their photosystems. Uncoupled antennae are the major cause for HCF of dark-adapted plants. Feeding of sucrose or glucose to high light-grown adg1-1/tpt-2 plants rescued the HCF- and growth phenotypes. Elevated sugar levels induce the expression of the glucose-6-phosphate/phosphate translocator2 (GPT2), which in principle could compensate for the deficiency in the TPT. A triple mutant with an additional defect in GPT2 (adg1-1/tpt-2/gpt2-1) exhibited an identical rescue of the HCF- and growth phenotype in response to sugar feeding as the adg1-1/tpt-2 double mutant, indicating that this rescue is independent from the sugar-triggered induction of GPT2. CONCLUSIONS We propose that cytosolic carbohydrate availability modulates acclimation to high light in A. thaliana. It is conceivable that the strong relationship between the chloroplast and nucleus with respect to a co-ordinated expression of photosynthesis genes is modified in carbohydrate-starved plants. Hence carbohydrates may be considered as a novel component involved in chloroplast-to-nucleus retrograde signaling, an aspect that will be addressed in future studies.
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Affiliation(s)
- Jessica Schmitz
- University of Cologne, Botanical Institute, Biocenter Cologne, Zülpicher Str. 47B, D-50674 Cologne, Germany
| | - Mark Aurel Schöttler
- Max Planck Institute of Molecular Plant Physiology, Am Mühlenberg 1, D-14476 Potsdam-Golm, Germany
| | - Stephan Krueger
- University of Cologne, Botanical Institute, Biocenter Cologne, Zülpicher Str. 47B, D-50674 Cologne, Germany
| | - Stefan Geimer
- Universität Bayreuth, Zellbiologie/Elektronenmikroskopie NW I/B1, Universitätsstrasse 30, D-95447 Bayreuth, Germany
| | - Anja Schneider
- Biozentrum der Ludwig-Maximilians-Universität München, Department Biologie I - Botanik Großhaderner Str. 2-4, D-82152 Planegg-Martinsried, Germany
| | - Tatjana Kleine
- Biozentrum der Ludwig-Maximilians-Universität München, Department Biologie I - Botanik Großhaderner Str. 2-4, D-82152 Planegg-Martinsried, Germany
| | - Dario Leister
- Biozentrum der Ludwig-Maximilians-Universität München, Department Biologie I - Botanik Großhaderner Str. 2-4, D-82152 Planegg-Martinsried, Germany
| | - Kirsten Bell
- University of Cologne, Botanical Institute, Biocenter Cologne, Zülpicher Str. 47B, D-50674 Cologne, Germany
| | - Ulf-Ingo Flügge
- University of Cologne, Botanical Institute, Biocenter Cologne, Zülpicher Str. 47B, D-50674 Cologne, Germany
| | - Rainer E Häusler
- University of Cologne, Botanical Institute, Biocenter Cologne, Zülpicher Str. 47B, D-50674 Cologne, Germany
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Pfalz J, Liebers M, Hirth M, Grübler B, Holtzegel U, Schröter Y, Dietzel L, Pfannschmidt T. Environmental control of plant nuclear gene expression by chloroplast redox signals. FRONTIERS IN PLANT SCIENCE 2012; 3:257. [PMID: 23181068 PMCID: PMC3500774 DOI: 10.3389/fpls.2012.00257] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2012] [Accepted: 11/01/2012] [Indexed: 05/20/2023]
Abstract
Plant photosynthesis takes place in specialized cell organelles, the chloroplasts, which perform all essential steps of this process. The proteins involved in photosynthesis are encoded by genes located on the plastid and nuclear genomes. Proper function and regulation of light harvesting and energy fixation thus requires a tight coordination of the gene expression machineries in the two genetic compartments. This is achieved by a bi-directional exchange of information between nucleus and plastids. Signals emerging from plastids report the functional and developmental state of the organelle to the nucleus and initiate distinct nuclear gene expression profiles, which trigger responses that support or improve plastid functions. Recent research indicated that this signaling is absolutely essential for plant growth and development. Reduction/oxidation (redox) signals from photosynthesis are key players in this information network since they do report functional disturbances in photosynthesis, the primary energy source of plants. Such disturbances are caused by environmental fluctuations for instance in illumination, temperature, or water availability. These environmental changes affect the linear electron flow of photosynthesis and result in changes of the redox state of the components involved [e.g., the plastoquinone (PQ) pool] or coupled to it (e.g., the thioredoxin pool). Thus, the changes in redox state directly reflect the environmental impact and serve as immediate plastidial signals to the nucleus. The triggered responses range from counterbalancing reactions within the physiological range up to severe stress responses including cell death. This review focuses on physiological redox signals from photosynthetic electron transport (PET), their relation to the environment, potential transduction pathways to the nucleus and their impact on nuclear gene expression.
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Affiliation(s)
| | | | | | | | | | | | | | - Thomas Pfannschmidt
- *Correspondence: Thomas Pfannschmidt, Department of Plant Physiology, Institute of General Botany and Plant Physiology, Friedrich-Schiller-University Jena, Dornburger Str. 159, 07743 Jena, Germany. e-mail:
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Tikkanen M, Gollan PJ, Suorsa M, Kangasjärvi S, Aro EM. STN7 Operates in Retrograde Signaling through Controlling Redox Balance in the Electron Transfer Chain. FRONTIERS IN PLANT SCIENCE 2012; 3:277. [PMID: 23267361 PMCID: PMC3525998 DOI: 10.3389/fpls.2012.00277] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2012] [Accepted: 11/23/2012] [Indexed: 05/20/2023]
Abstract
Phosphorylation of the major photosynthetic light harvesting antenna proteins by STN7 kinase balances excitation between PSII and PSI. Phosphorylation of such abundant proteins is unique, differing distinctively from conventional tasks of protein kinases in phosphorylation of low abundance proteins in signaling cascades. Excitation balance between PSII and PSI is critical for redox homeostasis between the plastoquinone and plastocyanin pools and PSI electron acceptors, determining the capacity of the thylakoid membrane to produce reactive oxygen species (ROS) that operate as signals relaying information between chloroplasts and other cellular compartments. STN7 has also been proposed to be a conventional signaling kinase, instigating the phosphorylation cascade required for coordinated expression of photosynthesis genes and assembly of the photosynthetic machinery. The absence of STN7 kinase, however, does not prevent plants from sensing redox imbalance and adjusting the stoichiometry of the photosynthetic machinery to restore redox homeostasis. This suggests that STN7 is not essential for signaling between the chloroplast and the nucleus. Here we discuss the evolution and functions of the STN7 and other thylakoid protein kinases and phosphatases, and the inherent difficulties in analyzing signaling cascades initiated from the photosynthetic machinery. Based on our analyses of literature and publicly available expression data, we conclude that STN7 exerts it signaling effect primarily by controlling chloroplast ROS homeostasis through maintaining steady-state phosphorylation of the light harvesting II proteins and the redox balance in the thylakoid membrane. ROS are important signaling molecules with a direct effect on the development of jasmonate, which in turn relays information out from the chloroplast. We propose that thylakoid membrane redox homeostasis, regulated by SNT7, sends cell-wide signals that reprogram the entire hormonal network in the cell.
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Affiliation(s)
- Mikko Tikkanen
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of TurkuTurku, Finland
| | - Peter J. Gollan
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of TurkuTurku, Finland
| | - Marjaana Suorsa
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of TurkuTurku, Finland
| | - Saijaliisa Kangasjärvi
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of TurkuTurku, Finland
| | - Eva-Mari Aro
- Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of TurkuTurku, Finland
- *Correspondence: Eva-Mari Aro, Molecular Plant Biology, Department of Biochemistry and Food Chemistry, University of Turku, FIN–20014 Turku, Finland. e-mail:
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Yao CW, Hsu BD, Chen BS. Constructing gene regulatory networks for long term photosynthetic light acclimation in Arabidopsis thaliana. BMC Bioinformatics 2011; 12:335. [PMID: 21834997 PMCID: PMC3162938 DOI: 10.1186/1471-2105-12-335] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2010] [Accepted: 08/11/2011] [Indexed: 01/02/2023] Open
Abstract
BACKGROUND Photosynthetic light acclimation is an important process that allows plants to optimize the efficiency of photosynthesis, which is the core technology for green energy. However, currently little is known about the molecular mechanisms behind the regulation of the photosynthetic light acclimation response. In this study, a systematic method is proposed to investigate this mechanism by constructing gene regulatory networks from microarray data of Arabidopsis thaliana. METHODS The potential TF-gene regulatory pairs of photosynthetic light acclimation have been obtained by data mining of literature and databases. Following the identification of these potential TF-gene pairs, they have been refined using Pearson's correlation, allowing the construction of a rough gene regulatory network. This rough gene regulatory network is then pruned using time series microarray data of Arabidopsis thaliana via the maximum likelihood system identification method and Akaike's system order detection method to approach the real gene regulatory network of photosynthetic light acclimation. RESULTS By comparing the gene regulatory networks under the PSI-to-PSII light shift and the PSII-to-PSI light shift, it is possible to identify important transcription factors for the different light shift conditions. Furthermore, the robustness of the gene network, in particular the hubs and weak linkage points, are also discussed under the different light conditions to gain further insight into the mechanisms of photosynthesis. CONCLUSIONS This study investigates the molecular mechanisms of photosynthetic light acclimation for Arabidopsis thaliana from the physiological level. This has been achieved through the construction of gene regulatory networks from the limited data sources and literature via an efficient computation method. If more experimental data for whole-genome ChIP-chip data and microarray data with multiple sampling points becomes available in the future, the proposed method will be improved on by constructing the whole-genome gene regulatory network. These advances will greatly improve our understanding of the mechanisms of the photosynthetic system.
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Affiliation(s)
- Cheng-Wei Yao
- Lab of Control and Systems Biology, Department of Electrical Engineering, National Tsing Hua University, Hsin-Chu, 300, Taiwan
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Dietzel L, Bräutigam K, Steiner S, Schüffler K, Lepetit B, Grimm B, Schöttler MA, Pfannschmidt T. Photosystem II supercomplex remodeling serves as an entry mechanism for state transitions in Arabidopsis. THE PLANT CELL 2011; 23:2964-77. [PMID: 21880991 PMCID: PMC3180804 DOI: 10.1105/tpc.111.087049] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2011] [Revised: 07/20/2011] [Accepted: 07/30/2011] [Indexed: 05/18/2023]
Abstract
Within dense plant populations, strong light quality gradients cause unbalanced excitation of the two photosystems resulting in reduced photosynthetic efficiency. Plants redirect such imbalances by structural rearrangements of the photosynthetic apparatus via state transitions and photosystem stoichiometry adjustments. However, less is known about the function of photosystem II (PSII) supercomplexes in this context. Here, we show in Arabidopsis thaliana that PSII supercomplex remodeling precedes and facilitates state transitions. Intriguingly, the remodeling occurs in the short term, paralleling state transitions, but is also present in a state transition-deficient mutant, indicating that PSII supercomplex generation is independently regulated and does not require light-harvesting complex phosphorylation and movement. Instead, PSII supercomplex remodeling involves reversible phosphorylation of PSII core subunits (preferentially of CP43) and requires the luminal PSII subunit Psb27 for general formation and structural stabilization. Arabidopsis knockout mutants lacking Psb27 display highly accelerated state transitions, indicating that release of PSII supercomplexes is required for phosphorylation and subsequent movement of the antenna. Downregulation of PSII supercomplex number by physiological light treatments also results in acceleration of state transitions confirming the genetic analyses. Thus, supercomplex remodeling is a prerequisite and an important kinetic determinant of state transitions.
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Affiliation(s)
- Lars Dietzel
- Lehrstuhl für Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, 07743 Jena, Germany
| | - Katharina Bräutigam
- Lehrstuhl für Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, 07743 Jena, Germany
| | - Sebastian Steiner
- Lehrstuhl für Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, 07743 Jena, Germany
| | - Kristin Schüffler
- Lehrstuhl für Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, 07743 Jena, Germany
| | - Bernard Lepetit
- Institut für Biologie I, Abteilung für Pflanzenphysiologie Universität Leipzig, 04103 Leipzig, Germany
| | - Bernhard Grimm
- Institut für Biologie/Pflanzenphysiologie, Humboldt-Universität Berlin, 10115 Berlin, Germany
| | - Mark Aurel Schöttler
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, 14476 Potsdam-Golm, Germany
| | - Thomas Pfannschmidt
- Lehrstuhl für Pflanzenphysiologie, Friedrich-Schiller-Universität Jena, 07743 Jena, Germany
- Address correspondence to
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Dietz KJ, Pfannschmidt T. Novel regulators in photosynthetic redox control of plant metabolism and gene expression. PLANT PHYSIOLOGY 2011; 155:1477-85. [PMID: 21205617 PMCID: PMC3091116 DOI: 10.1104/pp.110.170043] [Citation(s) in RCA: 91] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2010] [Accepted: 12/23/2010] [Indexed: 05/18/2023]
Affiliation(s)
- Karl-Josef Dietz
- Biochemistry and Physiology of Plants, Bielefeld University, 33615 Bielefeld, Germany.
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Kramer DM, Evans JR. The importance of energy balance in improving photosynthetic productivity. PLANT PHYSIOLOGY 2011; 155:70-8. [PMID: 21078862 PMCID: PMC3075755 DOI: 10.1104/pp.110.166652] [Citation(s) in RCA: 319] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2010] [Accepted: 11/10/2010] [Indexed: 05/18/2023]
Affiliation(s)
- David M Kramer
- Biochemistry and Molecular Biology and Department of Energy, Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824, USA.
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50
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Lemeille S, Rochaix JD. State transitions at the crossroad of thylakoid signalling pathways. PHOTOSYNTHESIS RESEARCH 2010; 106:33-46. [PMID: 20217232 DOI: 10.1007/s11120-010-9538-8] [Citation(s) in RCA: 115] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2009] [Accepted: 02/11/2010] [Indexed: 05/02/2023]
Abstract
In order to maintain optimal photosynthetic activity under a changing light environment, plants and algae need to balance the absorbed light excitation energy between photosystem I and photosystem II through processes called state transitions. Variable light conditions lead to changes in the redox state of the plastoquinone pool which are sensed by a protein kinase closely associated with the cytochrome b(6)f complex. Preferential excitation of photosystem II leads to the activation of the kinase which phosphorylates the light-harvesting system (LHCII), a process which is subsequently followed by the release of LHCII from photosystem II and its migration to photosystem I. The process is reversible as dephosphorylation of LHCII on preferential excitation of photosystem I is followed by the return of LHCII to photosystem II. State transitions involve a considerable remodelling of the thylakoid membranes, and in the case of Chlamydomonas, they allow the cells to switch between linear and cyclic electron flow. In this alga, a major function of state transitions is to adjust the ATP level to cellular demands. Recent studies have identified the thylakoid protein kinase Stt7/STN7 as a key component of the signalling pathways of state transitions and long-term acclimation of the photosynthetic apparatus. In this article, we present a review on recent developments in the area of state transitions.
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Affiliation(s)
- Sylvain Lemeille
- Department of Molecular Biology and Plant Biology, University of Geneva, 30, Quai Ernest Ansermet, 1211 Geneva, Switzerland
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