Global patterns and determinants of the initial concentrations of litter carbon components

Plant litter is an important carbon (C) and nutrient pool in terrestrial ecosystems. The C components in plant litter are important because they regulate plant litter decomposition rate, but little is known on the global patterns and determinants of their concentrations in freshly fallen plant litter. Here, we quantified the concentrations of leaf litter C components (i.e., carbohydrate, polyphenol, tannin, and condensed tannin) with 864 measurements from 161 independent publications. We found that (1) the mean concentrations of leaf litter carbohydrate, polyphenol, tannin and condensed tannin were 27.7, 6.08, 8.84 and 5.7 %, respectively; (2) the concentrations of leaf litter C components were affected by taxonomic division, mycorrhizal association, life form, and/or leaf shedding strategy; (3) soil property had similar impacts on the concentrations of the four C compounds, while the influence of mean annual temperature and precipitation varied; and (4) elevation had opposing effects on carbohydrate and polyphenol concentrations, but not on that of tannin and condensed tannin, and only carbohydrate concentration was strongly affected by absolute latitude. In general, our results clearly show the global patterns and drivers of the concentrations of litter C compounds, providing new insights into the role of litter decomposition in global C dynamics.

Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral-associated organic matter

Arbuscular mycorrhizal fungi (AMF) transport substantial plant carbon (C) that serves as a substrate for soil organisms, a precursor of soil organic matter (SOM), and a driver of soil microbial dynamics. Using two-chamber microcosms where an air gap isolated AMF from roots, we 13CO2-labeled Avena barbata for 6 wk and measured the C Rhizophagus intraradices transferred to SOM and hyphosphere microorganisms. NanoSIMS imaging revealed hyphae and roots had similar 13C enrichment. SOM density fractionation, 13C NMR, and IRMS showed AMF transferred 0.77 mg C g-1 of soil (increasing total C by 2% relative to non-mycorrhizal controls); 33% was found in occluded or mineral-associated pools. In the AMF hyphosphere, there was no overall change in community diversity but 36 bacterial ASVs significantly changed in relative abundance. With stable isotope probing (SIP)-enabled shotgun sequencing, we found taxa from the Solibacterales, Sphingobacteriales, Myxococcales, and Nitrososphaerales (ammonium oxidizing archaea) were highly enriched in AMF-imported 13C (> 20 atom%). Mapping sequences from 13C-SIP metagenomes to total ASVs showed at least 92 bacteria and archaea were significantly 13C-enriched. Our results illustrate the quantitative and ecological impact of hyphal C transport on the formation of potentially protective SOM pools and microbial roles in the AMF hyphosphere soil food web.

Differences in soil organic matter between EcM- and AM-dominated forests depend on tree and fungal identity

As global change shifts the species composition of forests, we need to understand which species characteristics affect soil organic matter (SOM) cycling to predict future soil carbon (C) storage. Recently, whether a tree species forms a symbiosis with arbuscular (AM) versus ectomycorrhizal (EcM) fungi has been suggested as a strong predictor of soil C storage, but there is wide variability within EcM systems. In this study, we investigated how mycorrhizal associations and the species composition of canopy trees and mycorrhizal fungi related to the proportion of soil C and nitrogen (N) in mineral associations and soil C:N across four sites representing distinct climates and tree communities in the eastern US broadleaf forest biome. In two of our sites, we found the expected relationship of declining mineral-associated C and N and increasing soil C:N ratios as the basal area of EcM-associating trees increased. However, across all sites these soil properties strongly correlated with canopy tree and fungal species composition. Sites where the expected pattern with EcM basal area was observed were (1) dominated by trees with lower quality litter in the Pinaceae and Fagaceae families and (2) dominated by EcM fungi with medium-distance exploration type hyphae, melanized tissues, and the potential to produce peroxidases. This observational study demonstrates that differences in SOM between AM and EcM systems are dependent on the taxa of trees and EcM fungi involved. Important information is lost when the rich mycorrhizal symbiosis is reduced to two categories.

Effect of grazing exclusion on emission of greenhouse gases and soil organic carbon turnover in alpine shrub meadow

Grazing exclusion (GE) is a management option used widely to restore degraded grassland and improve grassland ecosystems. However, the impacts of GE on soil properties and greenhouse gas emissions of alpine shrub meadow are still unclear, especially long-term GE of more than ten years. To fill part of this gap, we examined the effects of long-term GE of alpine shrub meadow on soil nutrients, soil properties, greenhouse gas emissions (CO₂ and CH₄) and soil organic carbon (SOC) turnover. When compared to grazed grassland (GG), long-term GE resulted in: 1) greater SOC, nitrogen (N), and phosphorous (P) content, especially in the 20-30 cm soil layer; 2) greater soil C:N, C:P and N:P ratios in the 20-30 cm depth; 3) greater soil CO₂, but lesser CH₄ emission during the growing season; and 4) much faster SOC turnover time (0-30 cm). GE of more than ten years can increase grassland C reserves and improve the C sequestration capacity of the ecosystem. Results from this study can have important implications in developing future grassland management policies on soil nutrient balances, restoration of degraded grassland and controlling shrub expansion.

Divergent effects of moderate grazing duration on carbon sequestration between temperate and alpine grasslands in China

Moderate grazing has been widely proven to improve ecosystem functioning and have profound effects on the carbon cycling and storage in grassland ecosystems, which highly depend on grazing duration and grassland type. However, the effects of moderate grazing durations on carbon sequestration with different grassland types over broad geographic scales across China remain underexplored in the context of striving for carbon neutrality. Here, we explored the probably different responses of carbon sequestration to moderate grazing duration for temperate and alpine grasslands based on 129 published literatures regarding the China's grasslands. The results showed the soil organic carbon stocks were significantly increased during short-term (<5 years) grazing duration, while significantly decreased during medium- (5-10 years) and long-term (≥ 10 years) grazing durations in temperate grasslands. However, the soil organic carbon stocks were significantly decreased during short-term grazing duration, while showed no significant changes during medium- and long-term grazing durations in alpine grasslands. The changes in soil organic stock were significantly positively correlated with the changes in belowground biomass, root:shoot, and microbial biomass carbon (P < 0.05). These findings suggest that the temperate grasslands change from carbon sink to carbon source with moderate grazing duration increasing, while the alpine grasslands present an opposite change pattern from carbon source to carbon sink, regulated by grazing-altered carbon input and microbial activities. Our study might have significant implications for future sustainable management practices for carbon sequestration of China's grasslands.

Nitrogen addition promotes early-stage and inhibits late-stage decomposition of fine roots in Pinus massoniana plantation

Increasing atmospheric nitrogen (N) deposition has a profound impact on the ecosystem functions and processes. Fine root decomposition is an important pathway for the reentry of nutrients into the soil. However, the effect of N addition on root decomposition and its potential mechanism is not well understood with respect to root branch orders. In this study, we conducted a 30-month decomposition experiment of fine roots under different concentrations of N addition treatments (0, 30, 60, and 90 kg N ha^-1 year^-1, respectively) in a typical Pinus massoniana plantation in the Three Gorges Reservoir Area of China. In the early stage of decomposition (0-18 months), N addition at all concentrations promoted the decomposition of fine roots, and the average decomposition rates of order 1-2, order 3-4, order 5-6 fine roots were increased by 13.54%, 6.15% and 7.96% respectively. In the late stage of decomposition (18-30 months), high N addition inhibited the decomposition of fine root, and the average decomposition rates of order 1-2, order 3-4, order 5-6 fine roots were decreased by 58.35%, 35.43% and 47.56% respectively. At the same time, N addition promoted the release of lignin, carbon (C), N, and phosphorus (P) in the early-stage, whereas high N addition inhibited the release of lignin, C, N, and the activities of lignin-degrading enzyme (peroxidase and polyphenol oxidase) in the late-stage. The decomposition constant (k) was significantly correlated with the initial chemical quality of the fine roots and lignin-degrading enzyme activities. The higher-order (order 3-4 and order 5-6) fine roots decomposed faster than lower-order (order 1-2) fine roots due to higher initial cellulose, starch, sugar, C concentrations and higher C/N, C/P, lignin/N ratios and lower N, P concentrations. In addition, low N (30 kg N ha^-1 year^-1) treatments decreased soil organic matter content, whereas high N (90 kg N ha^-1 year^-1) treatment had the opposite effect. All the N treatments reduced soil pH and total P content, indicating that increased N deposition may led to soil acidification. Our findings indicated that the effect of N addition on decomposition varied with the decomposition stages. The decomposition difference between the lower-order and higher-order fine roots were controlled strongly by the initial chemical quality of the fine roots. This study provides new insights into understanding and predicting possible changes in plant root decomposition and soil properties in the future atmospheric N deposition increase scenarios.

Mycorrhizal symbiosis pathway and edaphic fertility frame root economics space among tree species

The root economics space (RES) is multidimensional and largely shaped by belowground biotic and abiotic influences. However, how root-fungal symbioses and edaphic fertility drive this complexity remains unclear. Here, we measured absorptive root traits of 112 tree species in temperate and subtropical forests of China, including traits linked to functional differences between arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) hosts. Our data, from known mycorrhizal tree species, revealed a 'fungal-symbiosis' dimension distinguishing AM from ECM species. This divergence likely resulted from the contrasting mycorrhizal evolutionary development of AM vs ECM associations. Increased root tissue cortical space facilitates AM symbiosis, whereas increased root branching favours ECM symbiosis. Irrespective of mycorrhizal type, a 'root-lifespan' dimension reflecting aspects of root construction cost and defence was controlled by variation in specific root length and root tissue density, which was fully independent of root nitrogen content. Within this function-based RES, we observed a substantial covariation of axes with soil phosphorus and nitrate levels, highlighting the role played by these two axes in nutrient acquisition and conservation. Overall, our findings demonstrate the importance of evolved mycorrhizal symbiosis pathway and edaphic fertility in framing the RES, and provide theoretical and mechanistic insights into the complexity of root economics.

Mycelium chemistry differs markedly between ectomycorrhizal and arbuscular mycorrhizal fungi

The chemical quality of soil carbon (C) inputs is a major factor controlling litter decomposition and soil C dynamics. Mycorrhizal fungi constitute one of the dominant pools of soil microbial C, while their litter quality (chemical proxies of litter decomposability) is understood poorly, leading to major uncertainties in estimating soil C dynamics. We examined litter decomposability of arbuscular mycorrhizal (AM) and ectomycorrhizal (EM) fungal species using samples obtained from in vitro cultivation. We showed that the chemical composition of AM and EM fungal mycelium differs significantly: EM fungi have higher concentrations of labile (water-soluble, ethanol-soluble) and recalcitrant (non-extractable) chemical components, while AM fungi have higher concentrations of acid-hydrolysable components. Our results imply that differences in decomposability traits among mycorrhizal fungal guilds represent a critically important driver of the soil C cycle, which could be as vital as is recognized for differences among aboveground plant litter.

Distribution of soil carbon fractions under different bamboo species in northwest Himalayan foothills, India

Soil carbon and its fractions are important in understanding the mechanism of soil carbon sequestration. The present study evaluated the impact of seven commercial bamboo species, viz., Bambusa balcooa, B. bambos, B. vulgaris, B. nutans, Dendrocalamus hamiltonii, D. stocksii, and D. strictus, on labile and non-labile carbon fractions. In the 0-15-cm layer, B. nutans had the highest very labile C (7.65 g kg^-1) followed by B. vulgaris > B. balcooa > D. stocksii > D. hamiltonii > B. bambos > D. strictus > open. The active carbon pool was significantly low under the control plot (i.e. the open) indicating the positive influence of bamboo in soil C build-up in the top 0-15 cm soil layer. Amongst the different species of bamboo evaluated in this study, D. strictus accumulated the highest active C pool in 0-30-cm soil layer followed by B. vulgaris. Of the total organic C in the 0-30 cm soil depth, majority (55-60%) was contributed by the passive C pool comprising the less labile and the non-labile fraction of SOC. A high value of carbon stratification ratio (> 2) was observed for D. strictus, B. bambos, and D. hamiltonii which proves their potential for restoration of the degraded lands. The majority of bamboo species except for B. balcooa and D. stocksii showed a higher carbon management index than open systems, thereby indicating higher rates of soil C rehabilitation. Of the seven bamboo species, B. vulgaris, D. strictus, and B. nutans can be adopted for cultivation in the northwest Himalayas given their ability to positively impact the SOC and its fractions in both surface and sub-surface soil.

A starting guide to root ecology: strengthening ecological concepts and standardising root classification, sampling, processing and trait measurements

In the context of a recent massive increase in research on plant root functions and their impact on the environment, root ecologists currently face many important challenges to keep on generating cutting-edge, meaningful and integrated knowledge. Consideration of the below-ground components in plant and ecosystem studies has been consistently called for in recent decades, but methodology is disparate and sometimes inappropriate. This handbook, based on the collective effort of a large team of experts, will improve trait comparisons across studies and integration of information across databases by providing standardised methods and controlled vocabularies. It is meant to be used not only as starting point by students and scientists who desire working on below-ground ecosystems, but also by experts for consolidating and broadening their views on multiple aspects of root ecology. Beyond the classical compilation of measurement protocols, we have synthesised recommendations from the literature to provide key background knowledge useful for: (1) defining below-ground plant entities and giving keys for their meaningful dissection, classification and naming beyond the classical fine-root vs coarse-root approach; (2) considering the specificity of root research to produce sound laboratory and field data; (3) describing typical, but overlooked steps for studying roots (e.g. root handling, cleaning and storage); and (4) gathering metadata necessary for the interpretation of results and their reuse. Most importantly, all root traits have been introduced with some degree of ecological context that will be a foundation for understanding their ecological meaning, their typical use and uncertainties, and some methodological and conceptual perspectives for future research. Considering all of this, we urge readers not to solely extract protocol recommendations for trait measurements from this work, but to take a moment to read and reflect on the extensive information contained in this broader guide to root ecology, including sections I-VII and the many introductions to each section and root trait description. Finally, it is critical to understand that a major aim of this guide is to help break down barriers between the many subdisciplines of root ecology and ecophysiology, broaden researchers' views on the multiple aspects of root study and create favourable conditions for the inception of comprehensive experiments on the role of roots in plant and ecosystem functioning.

Build-up of labile, non-labile carbon fractions under fourteen-year-old bamboo plantations in the Himalayan foothills

Carbon fractions under different bamboo species viz., Bambusa balcooa, Bambusa bambos, Bambusa nutans, Dendrocalamus hamiltonii, Dendrocalamus asper and Dendrocalamus strictus were evaluated to understand the potential of these different bamboo species in soil rehabilitation in Himalayan foothills. The highest accumulation of the different carbon fractions likes very labile (6.12 mg g⁻¹), less labile (2.55 mg g⁻¹) and non-labile (11.40 mg g⁻¹) was observed under D. hamiltonii, while highest labile fraction (3.17 mg g⁻¹) was recorded under D. strictus. The highest active (8.85 mg g⁻¹) and passive pool (13.95 mg g⁻¹) were recorded under D. hamiltonii. Higher carbon management index (CMI) was obtained under D. hamiltonii (186.04) which was comparable with D. strictus (182.66) and B. nutans (179.24). Among all the six species, D. hamiltonii had the highest buildup of active and passive pool in both the soil depths. Bamboo plantations irrespective of the different species helped in enhancing the SOC fraction and enhanced C buildup in the soil in comparison to the open fallow land and holds potential in combating the problems of land degradation and soil rehabilitation.

Effect of Root and Mycelia on Fine Root Decomposition and Release of Carbon and Nitrogen Under Artemisia halodendron in a Semi-arid Sandy Grassland in China

Plant fine root turnover is a continuous process both spatially and temporally, and fine root decomposition is affected by many biotic and abiotic factors. However, the effect of the living roots and the associated mycorrhizal fungal mycelia on fine root decomposition remains unclear. The objective of this study is to explore the influence of these biotic factors on fine root decomposition in a semi-arid ecosystem. In this study, we investigated the effect of fine roots and mycelia on fine root decomposition of a pioneer shrub (Artemisia halodendron) in Horqin sandy land, northeast China, by the ingrowth core method combined with the litterbag method. Litterbags were installed in cores. Results showed that core a allowed the growth of both fine roots and mycelia (treatment R + M), core b only allowed the growth of mycelia (treatment M), and in core c the fine root and mycelia growth were restricted and only bulk soil was present (treatment S). These findings suggest that the process of root decomposition was significantly affected by the living roots and mycelia, and carbon (C) and nitrogen (N) concentration dynamics during root decomposition differed among treatments. Mycelia significantly stimulated the mass loss and C and N release during root decomposition. Treatment R + M significantly stimulated the accumulation of soil total C, total N, and organic N under litterbags. The mycelia significantly stimulated the accumulation of the inorganic N (ammonium-N and nitrate-N) but the presence of fine roots weakened nitrate-N accumulation. The presence of living roots and associated mycelia strongly affected the process of root decomposition and matter release in the litter-soil system. The results of this study should strengthen the understanding of root-soil interactions.

Assessing the dual-mycorrhizal status of a widespread tree species as a model for studies on stand biogeochemistry

Viewing plant species by their mycorrhizal type has explained a range of ecosystem processes. However, mycorrhizal type is confounded with plant phylogeny and the environments in which mycorrhizal partners occur. To circumvent these confounding effects, "dual-mycorrhizal" plant species may be potential models for testing the influence of mycorrhizal type on stand biogeochemistry. To assess their use as models, duality in mycorrhizas within a single host species must be confirmed and factors underlying their variation understood. We surveyed roots, soils, and leaves of mature aspen (Populus tremuloides) across 27 stands in western Canada spanning two biomes: boreal forest and parklands. Aspen roots were mostly ectomycorrhizal with sporadic and rare occurrences of arbuscular mycorrhizas. We further tested whether a climate moisture index predicted abundance of ectomycorrhizal roots (number of ectomycorrhizal root tips m^-1 root length) surveyed at two depths (0-20 cm and 20-40 cm) and found that ectomycorrhizal root abundance in subsoils (20-40 cm) was positively related to the index. We subsequently examined the relationships between ectomycorrhizal root abundance, leaf traits, and slow and fast pools of soil organic carbon and nitrogen. The ratio of leaf lignin:N, but not its components, increased along with ectomycorrhizal root abundance in subsoils. Soil carbon and nitrogen pools were independent of ectomycorrhizal root abundance. Our results suggest that (1) categorizing aspen as dual-mycorrhizal may overstate the functional importance of arbuscular mycorrhizas in this species and life stage, (2) water availability influences ectomycorrhizal root abundance, and (3) ectomycorrhizal root abundance coincides with leaf quality.

Mycorrhizal and environmental controls over root trait-decomposition linkage of woody trees

Traits are critical in predicting decomposition that fuels carbon and nutrient cycling in ecosystems. However, our understanding of root trait-decomposition linkage, and especially its dependence on mycorrhizal type and environmental context, remains limited. We explored the control of morphological and chemical (carbon- and nutrient-related) traits over decomposition of absorptive roots in 30 tree species associated with either arbuscular mycorrhizal (AM) or ectomycorrhizal (ECM) fungi in temperate and subtropical forests in China. Carbon-related traits (acid-unhydrolysable residue (AUR) and cellulose concentrations) had predominant control of root decomposition in AM species while nutrient-related traits (magnesium concentration) predominately controlled that in ECM species. Thicker absorptive roots decomposed faster in AM species as a result of their lower AUR concentrations, but more slowly in ECM angiosperm species potentially as a result of their higher magnesium concentrations. Root decomposition was linked to root nutrient economy in both forests while root diameter-decomposition coordination emerged only in the subtropical forest where root diameter and decomposition presented similar cross-species variations. Our findings suggest that root trait-decomposition linkages differ strongly with mycorrhizal type and environment, and that root diameter can predict decomposition but in opposing directions and with contrasting mechanisms for AM and ECM species.

Elevated temperature increases the accumulation of microbial necromass nitrogen in soil via increasing microbial turnover

Microbial-derived nitrogen (N) is now recognized as an important source of soil organic N. However, the mechanisms that govern the production of microbial necromass N, its turnover, and stabilization in soil remain poorly understood. To assess the effects of elevated temperature on bacterial and fungal necromass N production, turnover, and stabilization, we incubated ¹⁵ N-labeled bacterial and fungal necromass under optimum moisture conditions at 10°C, 15°C, and 25°C. We developed a new ¹⁵ N tracing model to calculate the production and mineralization rates of necromass N. Our results showed that bacterial and fungal necromass N had similar mineralization rates, despite their contrasting chemistry. Most bacterial and fungal necromass ¹⁵ N was recovered in the mineral-associated organic matter fraction through microbial anabolism, suggesting that mineral association plays an important role in stabilizing necromass N in soil, independently of necromass chemistry. Elevated temperature significantly increased the accumulation of necromass N in soil, due to the relatively higher microbial turnover and production of necromass N with increasing temperature than the increases in microbial necromass N mineralization. In conclusion, we found elevated temperature may increase the contribution of microbial necromass N to mineral-stabilized soil organic N.

Influence of fine root traits on in situ exudation rates in four conifers from different mycorrhizal associations

Plant roots can exude organic compounds into the soil that are useful for plant survival because they can degrade microorganisms around the roots and enhance allelopathy against other plant invasions. We developed a method to collect carbon (C) exudation on a small scale from tree fine roots by C-free filter traps. We quantified total C through root exudation in four conifers from different microbial symbiotic groups (ectomycorrhiza (ECM) and arbuscular mycorrhiza (AM)) in a cool-temperate forest in Japan. We determined the relationship of mass-based exudation rate from three diameter classes (<0.5, 0.5-1.0, and 1.0-2.5 mm) of the intact root system with root traits such as morphological traits including root diameter, specific root length (SRL), specific root area (SRA), root tissue density (RTD) and chemical traits including root nitrogen (N) content and C/N. Across species, the mass-based root exudation rate was found to correlate with diameter, SRA, RTD, N and C/N. When comparing mycorrhizal types, there were significant relationships between the exudation and diameter, SRL, SRA, root N and C/N in ECM species; however, these were not significant in AM species. Our results show that relationships between in situ root exudation and every measured trait of morphology and chemistry were strongly driven by ECM roots and not by AM roots. These differences might explain the fact that ECM roots in this study potentially covaried by optimizing the exudation and root morphology in forest trees, while exudation in AM roots did not change with changes in root morphology. In addition, the contrasting results may be attributable to the effect of degree and position of ECM and AM colonization in fine root system. Differences in fine root exudation relationships to root morphology for the two types of mycorrhizae will help us better understand the underlying mechanisms of belowground C allocation in forest ecosystems.

The potential of arbuscular mycorrhizal fungi in C cycling: a review

Arbuscular mycorrhizal fungi (AMF) contribute predominantly to soil organic matter by creating a sink demand for plant C and distributing to below-ground hyphal biomass. The extra-radical hyphae along with glomalin-related soil protein significantly influence the soil carbon dynamics through their larger extent and turnover period need to discuss. The role of AMF is largely overlooked in terrestrial C cycling and climate change models despite their greater involvement in net primary productivity augmentation and further accumulation of this additional photosynthetic fixed C in the soil. However, this buffering mechanism against elevated CO₂ condition to sequester extra C by AMF can be described only after considering their potential interaction with other microbes and associated mineral nutrients such as nitrogen cycling. In this article, we try to review the potential of AMF in C sequestration paving the way towards a better understanding of possible AMF mechanism by which C balance between biosphere and atmosphere can be moved forward in more positive direction.

Mycorrhizal types differ in ecophysiology and alter plant nutrition and soil processes

Mycorrhizal fungi benefit plants by improved mineral nutrition and protection against stress, yet information about fundamental differences among mycorrhizal types in fungi and trees and their relative importance in biogeochemical processes is only beginning to accumulate. We critically review and synthesize the ecophysiological differences in ectomycorrhizal, ericoid mycorrhizal and arbuscular mycorrhizal symbioses and the effect of these mycorrhizal types on soil processes from local to global scales. We demonstrate that guilds of mycorrhizal fungi display substantial differences in genome-encoded capacity for mineral nutrition, particularly acquisition of nitrogen and phosphorus from organic material. Mycorrhizal associations alter the trade-off between allocation to roots or mycelium, ecophysiological traits such as root exudation, weathering, enzyme production, plant protection, and community assembly as well as response to climate change. Mycorrhizal types exhibit differential effects on ecosystem carbon and nutrient cycling that affect global elemental fluxes and may mediate biome shifts in response to global change. We also note that most studies performed to date have not been properly replicated and collectively suffer from strong geographical sampling bias towards temperate biomes. We advocate that combining carefully replicated field experiments and controlled laboratory experiments with isotope labelling and -omics techniques offers great promise towards understanding differences in ecophysiology and ecosystem services among mycorrhizal types.

Nitrogen dynamics of decomposing Scots pine needle litter depends on colonizing fungal species

In boreal ecosystems plant production is often limited by low availability of nitrogen. Nitrogen retention in below-ground organic pools plays an important role in restricting recirculation to plants and thereby hampers forest production. Saprotrophic fungi are commonly assigned to different decomposer strategies, but how these relate to nitrogen cycling remains to be understood. Decomposition of Scots pine needle litter was studied in axenic microcosms with the ligninolytic litter decomposing basidiomycete Gymnopus androsaceus or the stress tolerant ascomycete Chalara longipes. Changes in chemical composition were followed by 13C CP/MAS NMR spectroscopy and nitrogen dynamics was assessed by the addition of a 15N tracer. Decomposition by C. longipes resulted in nitrogen retention in non-hydrolysable organic matter, enriched in aromatic and alkylic compounds, whereas the ligninolytic G. androsaceus was able to access this pool, counteracting nitrogen retention. Our observations suggest that differences in decomposing strategies between fungal species play an important role in regulating nitrogen retention and release during litter decomposition, implying that fungal community composition may impact nitrogen cycling at the ecosystem level.

Leaf litter decay rates differ between mycorrhizal groups in temperate, but not tropical, forests

Whereas the primary controls on litter decomposition are well established, we lack a framework for predicting interspecific differences in litter decay within and across ecosystems. Given previous research linking tree mycorrhizal association with carbon and nutrient dynamics, we hypothesized that the two dominant mycorrhizal groups in forests - arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) fungi - differ in litter decomposition rates. We compiled leaf litter chemistry and decay data for AM- and ECM-associating angiosperms and gymnosperms (> 200 species) from temperate and tropical/subtropical, and investigated relationships among decay rates, mycorrhizal association, phylogeny and climate. In temperate forests, AM litters decayed faster than ECM litters, with litter nitrogen and phylogeny best explaining variation in litter decay. In sub/tropical forests, we found no significant difference in litter decay rate between mycorrhizal groups, and variation in decay rates was best explained by litter phosphorus. Our results suggest that knowledge of tree mycorrhizal association may improve predictions of species effects on ecosystem processes, particularly in temperate forests where AM and ECM species commonly co-occur, providing a predictive framework for linking litter quality, organic matter dynamics and nutrient acquisition in forests.

Profile distribution of soil organic and inorganic carbon following revegetation on the Loess Plateau, China

In arid and semiarid areas, which are characterized by fragile ecological systems, deforestation and tillage have resulted in a net loss of soil carbon to the atmosphere. Vegetation restoration has great potential to alter the soil carbon stock. Exploring sustainable vegetation restoration for carbon sequestration in soils requires adequate information on soil carbon and soil water. The vertical distribution of soil organic/inorganic carbon (SOC/SIC) and soil water in the 0-200 cm soil depth under cropland, forestland, shrubland, and grassland with restoration age (0-30 years) in Zhifanggou watershed on the Chinese Loess Plateau were investigated. The results showed that after 10 years vegetation restoration, SOC content at topsoil in forestland, shrubland, and grassland increased significantly, and SIC content at subsoil in shrubland and grassland increased significantly due to more pedogenic carbonate formed by Ca²⁺ derived from the decomposed litter and biogenic CO₂. The absolute values of the slopes of the linear regression patterns between SOC and SIC were in the order grassland > forestland and shrubland and indicate that under the grassland the increment in SIC is larger per unit decrement in SOC. After 20 years vegetation restoration, the soil water content under forestland and shrubland decreased to 4.74%-6.16 and 4.08%-5.21% which are close to the wilting coefficient (5%) for the sandy loam soil in Zhifanggou watershed, resulting in the obstacle to sustainable land use. The conversion from cropland to natural grassland kept the relatively high level of soil water and may be the sustainable vegetation restoration approach to increase soil carbon.

Impact of understory vegetation on soil carbon and nitrogen dynamic in aerially seeded Pinus massoniana plantations

Understory vegetation plays a vital role in regulating soil carbon (C) and nitrogen (N) characteristics due to differences in plant functional traits. Different understory vegetation types have been reported following aerial seeding. While aerial seeding is common in areas with serious soil erosion, few studies have been conducted to investigate changes in soil C and N cycling as affected by understory vegetation in aerially seeded plantations. Here, we studied soil C and N characteristics under two naturally formed understory vegetation types (Dicranopteris and graminoid) in aerially seeded Pinus massoniana Lamb plantations. Across the two studied understory vegetation types, soil organic C was significantly correlated with all measured soil N variables, including total N, available N, microbial biomass N and water-soluble organic N, while microbial biomass C was correlated with all measured variables except soil organic C. Dicranopteris and graminoid differed in their effects on soil C and N process. Except water-soluble organic C, all the other C and N variables were higher in soils with graminoids. The higher levels of soil organic C, microbial biomass C, total N, available N, microbial biomass N and water-soluble organic N were consistent with the higher litter and root quality (C/N) of graminoid vegetation compared to Dicranopteris. Changes in soil C and N cycles might be impacted by understory vegetation types via differences in litter or root quality.

The mycorrhizal type governs root exudation and nitrogen uptake of temperate tree species

Even though the two dominant mycorrhizal associations of temperate tree species differentially couple carbon (C) and nitrogen (N) cycles in temperate forests, systematic differences between the biogeochemical cycles of arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) tree species remain poorly described. A classification according to the mycorrhizal type offers the chance, though, to develop a global frame concept for the prediction of temperate ecosystem responses to environmental change. Focusing on the influence of mycorrhizal types on two key plant processes of biogeochemical cycling (root exudation and N acquisition), we investigated four temperate deciduous tree species per mycorrhizal type in a drought experiment in large mesocosms. We hypothesized that (H1) C loss by root exudation is higher in ECM than in AM trees, (H2) drought leads to higher reductions in root exudation of drought-sensitive ECM trees and (H3) inorganic N uptake is higher in AM than in ECM trees. In contradiction to H2, we found no systematic difference in root exudation between the mycorrhizal types at ample soil moisture, but almost twofold higher exudation in ECM trees when exposed to soil drought. In addition, photosynthetic C cost of root exudation strongly increased by ~10-fold in drought-treated ECM trees, while it only doubled in AM trees, which confirms H1. With respect to H3, we corroborated that AM trees had higher absolute and relative inorganic N acquisition rates than ECM trees, while the organic N uptake did not differ between mycorrhizal types. We conclude that ECM trees are less efficient in inorganic N uptake than AM trees, but ECM trees increase root C release as an adaptive response to dry soil to maintain hydraulic conductivity and/or nutrient availability. These systematic differences in key biogeochemical processes support hints on the key role of the mycorrhizal types in coupling C and N cycles in temperate forests.

Similar below-ground carbon cycling dynamics but contrasting modes of nitrogen cycling between arbuscular mycorrhizal and ectomycorrhizal forests

Compared with ectomycorrhizal (ECM) forests, arbuscular mycorrhizal (AM) forests are hypothesized to have higher carbon (C) cycling rates and a more open nitrogen (N) cycle. To test this hypothesis, we synthesized 645 observations, including 22 variables related to below-ground C and N dynamics from 100 sites, where AM and ECM forests co-occurred at the same site. Leaf litter quality was lower in ECM than in AM trees, leading to greater forest floor C stocks in ECM forests. By contrast, AM forests had significantly higher mineral soil C concentrations, and this result was strongly mediated by plant traits and climate. No significant differences were found between AM and ECM forests in C fluxes and labile C concentrations. Furthermore, inorganic N concentrations, net N mineralization and nitrification rates were all higher in AM than in ECM forests, indicating 'mineral' N economy in AM but 'organic' N economy in ECM trees. AM and ECM forests show systematic differences in mineral vs organic N cycling, and thus mycorrhizal type may be useful in predicting how different tree species respond to multiple environmental change factors. By contrast, mycorrhizal type alone cannot reliably predict below-ground C dynamics without considering plant traits and climate.

Changes in the anatomy, morphology and mycorrhizal infection of fine root systems of Cryptomeria japonica in relation to stand ageing

Biomass allocation to fine roots often increases under soil nutrient deficiency, but the fine root biomass does not often increase in old stands, even under nutrient limitation. Therefore, in old stands, the morphology, anatomy, branching architecture and mycorrhization of fine roots may compensate efficiently for nutrient acquisition by the low fine root biomass. In this study, changes in the morphology, anatomy and arbuscular mycorrhizal infection at each branching position of fine root clusters were evaluated in relation to stand age. A chronosequence (6–90 years of age) of stands in a Cryptomeria japonica D. Don plantation was used for these analyses. The fine root size parameters, such as length, weight and tip numbers of fine root clusters, increased with stand age. The specific root tip length (SRTL) decreased with increasing stand age, suggesting that the allocation to root active portions decreased with stand age. From the anatomical observation, the ephemeral root tips increased with stand age, suggesting that root tip turnover within a root cluster was high in old stands. The proportions of proto-xylem groups among branching positions indicated that the life cycles in branching hierarchy should be clearer in old stands than that in younger stands. The increasing in the mycorrhizal infection of root tips in old stands should enhance the root tip absorptive functions. The SRTL was correlated with the wood/needle ratio, suggesting that carbon limitation as the stand ages may result in decline of carbon allocation to maintain active root tips. However, increasing of the ephemeral tips and mycorrhizal infection rates may compensate the declines of tip allocation in old stands.

Arbuscular mycorrhizal fungi enhance soil carbon sequestration in the coalfields, northwest China

Carbon storage is affected by photosynthesis (Pn) and soil respiration (Rs), which have been studied extensively in natural and agricultural systems. However, the effects of Pn and Rs on carbon storages in the presence of arbuscular mycorrhizal fungi (AMF) in coalfields remain unclear. A field experiment was established in 2014 in Shendong coal mining subsidence area. The treatments comprised two inoculation levels (inoculated with or without 100 g AMF inoculums per seedlings) and four plant species [wild cherry (Prunus discadenia Koebne L.), cerasus humilis (Prunus dictyneura Diels L.), shiny leaf Yellow horn (Xanthoceras sorbifolium Bunge L.) and apricot (Armeniaca sibirica L.)]. AMF increased Pn of four species ranging from 15.3% to 33.1% and carbon storage, averaged by 17.2% compared to controls. Soil organic carbon (OC), easily extractable glomalin-relation soil protein (EE-GRSP), and total glomalin-relation soil protein (T-GRSP) were significantly increased by AMF treatment. The effect of AMF on the sensitivity of Rs depended on soil temperature. The results highlighted the exponential models to explain the responses of Rs to soil temperature, and for the first time quantified AMF caused carbon sequestration and Rs. Thus, to our knowledge, AMF is beneficial to ecosystems through facilitating carbon conservation in coalfield soils.

More of the same? In situ leaf and root decomposition rates do not vary between 80 native and nonnative deciduous forest species

Invaders often have greater rates of production and produce more labile litter than natives. The increased litter quantity and quality of invaders should increase nutrient cycling through faster litter decomposition. However, the limited number of invasive species that have been included in decomposition studies has hindered the ability to generalize their impacts on decomposition rates. Further, previous decomposition studies have neglected roots. We measured litter traits and decomposition rates of leaves for 42 native and 36 nonnative woody species, and those of fine roots for 23 native and 25 nonnative species that occur in temperate deciduous forests throughout the Eastern USA. Among the leaf and root traits that differed between native and invasive species, only leaf nitrogen was significantly associated with decomposition rate. However, native and nonnative species did not differ systematically in leaf and root decomposition rates. We found that among the parameters measured, litter decomposer activity was driven by litter chemical quality rather than tissue density and structure. Our results indicate that litter decomposition rate per se is not a pathway by which forest woody invasive species affect North American temperate forest soil carbon and nutrient processes.

Effects of Increased Summer Precipitation and Nitrogen Addition on Root Decomposition in a Temperate Desert

BACKGROUND

Climate change scenarios that include precipitation shifts and nitrogen (N) deposition are impacting carbon (C) budgets in arid ecosystems. Roots constitute an important part of the C cycle, but it is still unclear which factors control root mass loss and nutrient release in arid lands.

METHODOLOGY/PRINCIPAL FINDINGS

Litterbags were used to investigate the decomposition rate and nutrient dynamics in root litter with water and N-addition treatments in the Gurbantunggut Desert in China. Water and N addition had no significant effect on root mass loss and the N and phosphorus content of litter residue. The loss of root litter and nutrient releases were strongly controlled by the initial lignin content and the lignin:N ratio, as evidenced by the negative correlations between decomposition rate and litter lignin content and the lignin:N ratio. Fine roots of Seriphidium santolinum (with higher initial lignin content) had a slower decomposition rate in comparison to coarse roots.

CONCLUSION/SIGNIFICANCE

Results from this study indicate that small and temporary changes in rainfall and N deposition do not affect root decomposition patterns in the Gurbantunggut Desert. Root decomposition rates were significantly different between species, and also between fine and coarse roots, and were determined by carbon components, especially lignin content, suggesting that root litter quality may be the primary driver of belowground carbon turnover.

The Role of Plant-Microbe Interactions and Their Exploitation for Phytoremediation of Air Pollutants

Since air pollution has been linked to a plethora of human health problems, strategies to improve air quality are indispensable. Despite the complexity in composition of air pollution, phytoremediation was shown to be effective in cleaning air. Plants are known to scavenge significant amounts of air pollutants on their aboveground plant parts. Leaf fall and runoff lead to transfer of (part of) the adsorbed pollutants to the soil and rhizosphere below. After uptake in the roots and leaves, plants can metabolize, sequestrate and/or excrete air pollutants. In addition, plant-associated microorganisms play an important role by degrading, detoxifying or sequestrating the pollutants and by promoting plant growth. In this review, an overview of the available knowledge about the role and potential of plant-microbe interactions to improve indoor and outdoor air quality is provided. Most importantly, common air pollutants (particulate matter, volatile organic compounds and inorganic air pollutants) and their toxicity are described. For each of these pollutant types, a concise overview of the specific contributions of the plant and its microbiome is presented. To conclude, the state of the art and its related future challenges are presented.

Quantitative assessment of the differential impacts of arbuscular and ectomycorrhiza on soil carbon cycling

A significant fraction of carbon stored in the Earth's soil moves through arbuscular mycorrhiza (AM) and ectomycorrhiza (EM). The impacts of AM and EM on the soil carbon budget are poorly understood. We propose a method to quantify the mycorrhizal contribution to carbon cycling, explicitly accounting for the abundance of plant-associated and extraradical mycorrhizal mycelium. We discuss the need to acquire additional data to use our method, and present our new global database holding information on plant species-by-site intensity of root colonization by mycorrhizas. We demonstrate that the degree of mycorrhizal fungal colonization has globally consistent patterns across plant species. This suggests that the level of plant species-specific root colonization can be used as a plant trait. To exemplify our method, we assessed the differential impacts of AM : EM ratio and EM shrub encroachment on carbon stocks in sub-arctic tundra. AM and EM affect tundra carbon stocks at different magnitudes, and via partly distinct dominant pathways: via extraradical mycelium (both EM and AM) and via mycorrhizal impacts on above- and belowground biomass carbon (mostly AM). Our method provides a powerful tool for the quantitative assessment of mycorrhizal impact on local and global carbon cycling processes, paving the way towards an improved understanding of the role of mycorrhizas in the Earth's carbon cycle.

The decomposition of fine and coarse roots: their global patterns and controlling factors

Fine root decomposition represents a large carbon (C) cost to plants, and serves as a potential soil C source, as well as a substantial proportion of net primary productivity. Coarse roots differ markedly from fine roots in morphology, nutrient concentrations, functions, and decomposition mechanisms. Still poorly understood is whether a consistent global pattern exists between the decomposition of fine (<2 mm root diameter) and coarse (≥2 mm) roots. A comprehensive terrestrial root decomposition dataset, including 530 observations from 71 sampling sites, was thus used to compare global patterns of decomposition of fine and coarse roots. Fine roots decomposed significantly faster than coarse roots in middle latitude areas, but their decomposition in low latitude regions was not significantly different from that of coarse roots. Coarse root decomposition showed more dependence on climate, especially mean annual temperature (MAT), than did fine roots. Initial litter lignin content was the most important predictor of fine root decomposition, while lignin to nitrogen ratios, MAT, and mean annual precipitation were the most important predictors of coarse root decomposition. Our study emphasizes the necessity of separating fine roots and coarse roots when predicting the response of belowground C release to future climate changes.

Carbon sequestration is related to mycorrhizal fungal community shifts during long-term succession in boreal forests

Boreal forest soils store a major proportion of the global terrestrial carbon (C) and below-ground inputs contribute as much as above-ground plant litter to the total C stored in the soil. A better understanding of the dynamics and drivers of root-associated fungal communities is essential to predict long-term soil C storage and climate feedbacks in northern ecosystems. We used 454-pyrosequencing to identify fungal communities across fine-scaled soil profiles in a 5000 yr fire-driven boreal forest chronosequence, with the aim of pinpointing shifts in fungal community composition that may underlie variation in below-ground C sequestration. In early successional-stage forests, higher abundance of cord-forming ectomycorrhizal fungi (such as Cortinarius and Suillus species) was linked to rapid turnover of mycelial biomass and necromass, efficient nitrogen (N) mobilization and low C sequestration. In late successional-stage forests, cord formers declined, while ericoid mycorrhizal ascomycetes continued to dominate, potentially facilitating long-term humus build-up through production of melanized hyphae that resist decomposition. Our results suggest that cord-forming ectomycorrhizal fungi and ericoid mycorrhizal fungi play opposing roles in below-ground C storage. We postulate that, by affecting turnover and decomposition of fungal tissues, mycorrhizal fungal identity and growth form are critical determinants of C and N sequestration in boreal forests.

Plant litter chemistry and microbial priming regulate the accrual, composition and stability of soil carbon in invaded ecosystems

Soil carbon (C) sequestration, as an ecosystem property, may be strongly influenced by invasive plants capable of depositing disproportionately high quantities of chemically distinct litter that disrupt ecosystem processes. However, a mechanistic understanding of the processes that regulate soil C storage in invaded ecosystems remains surprisingly elusive. Here, we studied the impact of the invasion of two noxious nonnative species, Polygonum cuspidatum, which produces recalcitrant litter, and Pueraria lobata, which produces labile litter, on the quantity, molecular composition, and stability of C in the soils they invade. Compared with an adjacent noninvaded old-field, P. cuspidatum-invaded soils exhibited a 26% increase in C, partially through selective preservation of plant polymers. Despite receiving a 22% higher litter input, P. lobata-invaded Pinus stands exhibited a 28% decrease in soil C and a twofold decrease in plant biomarkers, indicating microbial priming of native soil C. The stability of C exhibited an opposite trend: the proportion of C that was resistant to oxidation was 21% lower in P. cuspidatum-invaded soils and 50% higher in P. lobata-invaded soils. Our results highlight the capacity of invasive plants to feed back to climate change by destabilizing native soil C stocks and indicate that environments that promote the biochemical decomposition of plant litter would enhance the long-term storage of soil C. Further, our study highlights the concurrent influence of dominant plant species on both selective preservation and humification of soil organic matter.

Specificity of plant-microbe interactions in the tree mycorrhizosphere biome and consequences for soil C cycling

Mycorrhizal associations are ubiquitous and form a substantial component of the microbial biomass in forest ecosystems and fluxes of C to these belowground organisms account for a substantial portion of carbon assimilated by forest vegetation. Climate change has been predicted to alter belowground plant-allocated C which may cause compositional shifts in soil microbial communities, and it has been hypothesized that this community change will influence C mitigation in forest ecosystems. Some 10,000 species of ectomycorrhizal fungi are currently recognized, some of which are host specific and will only associate with a single tree species, for example, Suillus grevillei with larch. Mycorrhizae are a strong sink for plant C, differences in mycorrhizal anatomy, particularly the presence and extent of emanating hyphae, can affect the amount of plant C allocated to these assemblages. Mycorrhizal morphology affects not only spatial distribution of C in forests, but also differences in the longevity of these diverse structures may have important consequences for C sequestration in soil. Mycorrhizal growth form has been used to group fungi into distinctive functional groups that vary qualitatively and spatially in their foraging and nutrient acquiring potential. Through new genomic techniques we are beginning to understand the mechanisms involved in the specificity and selection of ectomycorrhizal associations though much less is known about arbuscular mycorrhizal associations. In this review we examine evidence for tree species- mycorrhizal specificity, and the mechanisms involved (e.g., signal compounds). We also explore what is known about the effects of these associations and interactions with other soil organisms on the quality and quantity of C flow into the mycorrhizosphere (the area under the influence of mycorrhizal root tips), including spatial and seasonal variations. The enormity of the mycorrhizosphere biome in forests and its potential to sequester substantial C belowground highlights the vital importance of increasing our knowledge of the dynamics of the different mycorrhizal functional groups in diverse forests.

Impacts of environmental factors on fine root lifespan

The lifespan of fast-cycling roots is a critical parameter determining a large flux of plant carbon into soil through root turnover and is a biological feature regulating the capacity of a plant to capture soil water and nutrients via root-age-related physiological processes. While the importance of root lifespan to whole-plant and ecosystem processes is increasingly recognized, robust descriptions of this dynamic process and its response to changes in climatic and edaphic factors are lacking. Here we synthesize available information and propose testable hypotheses using conceptual models to describe how changes in temperature, water, nitrogen (N), and phosphorus (P) availability impact fine root lifespan within a species. Each model is based on intrinsic responses including root physiological activity and alteration of carbohydrate allocation at the whole-plant level as well as extrinsic factors including mycorrhizal fungi and pressure from pathogens, herbivores, and other microbes. Simplifying interactions among these factors, we propose three general principles describing fine root responses to complex environmental gradients. First, increases in a factor that strongly constrains plant growth (temperature, water, N, or P) should result in increased fine root lifespan. Second, increases in a factor that exceeds plant demand or tolerance should result in decreased lifespan. Third, as multiple factors interact fine root responses should be determined by the most dominant factor controlling plant growth. Moving forward, field experiments should determine which types of species (e.g., coarse vs. fine rooted, obligate vs. facultative mycotrophs) will express greater plasticity in response to environmental gradients while ecosystem models may begin to incorporate more detailed descriptions of root lifespan and turnover. Together these efforts will improve quantitative understanding of root dynamics and help to identify areas where future research should be focused.

Changes in soil carbon and nitrogen following land abandonment of farmland on the Loess Plateau, China

The revegetation of abandoned farmland significantly influences soil organic C (SOC) and total N (TN). However, the dynamics of both soil OC and N storage following the abandonment of farmland are not well understood. To learn more about soil C and N storages dynamics 30 years after the conversion of farmland to grassland, we measured SOC and TN content in paired grassland and farmland sites in the Zhifanggou watershed on the Loess Plateau, China. The grassland sites were established on farmland abandoned for 1, 7, 13, 20, and 30 years. Top soil OC and TN were higher in older grassland, especially in the 0–5 cm soil depths; deeper soil OC and TN was lower in younger grasslands (<20 yr), and higher in older grasslands (30 yr). Soil OC and N storage (0–100 cm) was significantly lower in the younger grasslands (<20 yr), had increased in the older grasslands (30 yr), and at 30 years SOC had increased to pre-abandonment levels. For a thirty year period following abandonment the soil C/N value remained at 10. Our results indicate that soil C and TN were significantly and positively correlated, indicating that studies on the storage of soil OC and TN needs to focus on deeper soil and not be restricted to the uppermost (0–30 cm) soil levels.

The mycorrhizal-associated nutrient economy: a new framework for predicting carbon-nutrient couplings in temperate forests

Understanding the context dependence of ecosystem responses to global changes requires the development of new conceptual frameworks. Here we propose a framework for considering how tree species and their mycorrhizal associates differentially couple carbon (C) and nutrient cycles in temperate forests. Given that tree species predominantly associate with a single type of mycorrhizal fungi (arbuscular mycorrhizal (AM) fungi or ectomycorrhizal (ECM) fungi), and that the two types of fungi differ in their modes of nutrient acquisition, we hypothesize that the abundance of AM and ECM trees in a plot, stand, or region may provide an integrated index of biogeochemical transformations relevant to C cycling and nutrient retention. First, we describe how forest plots dominated by AM tree species have nutrient economies that differ in their C-nutrient couplings from those in plots dominated by ECM trees. Secondly, we demonstrate how the relative abundance of AM and ECM trees can be used to estimate nutrient dynamics across the landscape. Finally, we describe how our framework can be used to generate testable hypotheses about forest responses to global change factors, and how these dynamics can be used to develop better representations of plant-soil feedbacks and nutrient constraints on productivity in ecosystem and earth system models.