51
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Lin Q, Fan M, Peng X, Ma J, Zhang Y, Yu F, Wu Z, Liu B. Response of Vallisneria natans to aluminum phytotoxicity and their synergistic effect on nitrogen, phosphorus change in sediments. JOURNAL OF HAZARDOUS MATERIALS 2020; 400:123167. [PMID: 32569987 DOI: 10.1016/j.jhazmat.2020.123167] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Revised: 05/14/2020] [Accepted: 06/05/2020] [Indexed: 06/11/2023]
Abstract
Increasing aluminum (Al) use and its effects on aquatic systems have been a global issue, however the Al impacts on submerged plants and their ecological functions were poorly understood. Aquatic simulation experiments were performed to study Al-toxicity on the germination and seedling morphological and physiological characteristics of Vallisneria natans, and investigate their synergistic effect on nitrogen (N), phosphorus (P) change and microbial community in sediment. The seeds germination characteristics, growth and physiological parameters of seedlings, including root activity, were significantly affected by alum treatments and the inhibition levels increased with Al3+ concentration. The Al accumulation in roots and leaves were significantly different. Al3+ concentration above 0.3 mg/L showed toxic to V. natans. TN, TP, IP, Fe/Al-P contents in sediments varied markedly under co-existence of Al and V. natans. Additionally, the relative abundance of sediment microbial community related to N, P cycle was effected. Results concluded that the increasing aquatic Al-concentration inhibits growth and propagation of submerged plants and the ecological restoration effect, and exerts synergistic effect with submerged plants on N, P components in sediments. Such findings were helpful for Al ecological evaluation, and were instructive for the submerged plants restoration in shallow eutrophic lakes with Al input.
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Affiliation(s)
- Qingwei Lin
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, China; State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
| | - Mingjun Fan
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Xue Peng
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
| | - Jianmin Ma
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Yi Zhang
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
| | - Fei Yu
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, China
| | - Zhenbin Wu
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China
| | - Biyun Liu
- State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China.
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Tao J, Hao Z, Huang C. Molecular evolution of GDP-L-galactose phosphorylase, a key regulatory gene in plant ascorbate biosynthesis. AOB PLANTS 2020; 12:plaa055. [PMID: 33173574 PMCID: PMC7640755 DOI: 10.1093/aobpla/plaa055] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Accepted: 10/14/2020] [Indexed: 06/11/2023]
Abstract
Ascorbic acid (AsA) is a widespread antioxidant in living organisms, and plays essential roles in the growth and development of animals and plants as well as in the response to abiotic stress tolerance. The GDP-L-galactose phosphorylase (GGP) is a key regulatory gene in plant AsA biosynthesis that can regulate the concentration of AsA at the transcriptional and translational levels. The function and regulation mechanisms of GGP have been well understood; however, the molecular evolutionary patterns of the gene remain unclear. In this study, a total of 149 homologous sequences of GGP were sampled from 71 plant species covering the major groups of Viridiplantae, and the phylogenetic relationships, gene duplication and molecular evolution analyses of the genes were systematically investigated. Results showed that GGP genes are present throughout the plant kingdom and five shared whole-genome duplications and several lineage-specific whole-genome duplications were found, which led to the rapid expansion of GGPs in seed plants, especially in angiosperms. The structure of GGP genes was more conserved in land plants, but varied greatly in green algae, indicating that GGP may have undergone great differentiation in the early stages of plant evolution. Most GGP proteins had a conserved motif arrangement and composition, suggesting that plant GGPs have similar catalytic functions. Molecular evolutionary analyses showed that GGP genes were predominated by purifying selection, indicating that the gene is functionally conserved due to its vital importance in AsA biosynthesis. Most of the branches under positive selection identified by the branch-site model were mainly in the chlorophytes lineage, indicating episodic diversifying selection may contribute to the evolution of GGPs, especially in the chlorophyte lineage. The conserved function of GGP and its rapid expansion in angiosperms maybe one of the reasons for the increase of AsA content in angiosperms, enabling angiosperms to adapt to changing environments.
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Affiliation(s)
- Junjie Tao
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
| | - Zhuan Hao
- College of Chemistry and Materials, Weinan Normal University, Weinan, China
| | - Chunhui Huang
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
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53
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Hu X, Liu J, Li W, Wen T, Li T, Guo X, Liu RH. Biosynthesis and accumulation of multi-vitamins in black sweet corn (Zea mays L.) during kernel development. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2020; 100:5230-5238. [PMID: 32519367 DOI: 10.1002/jsfa.10573] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 05/06/2020] [Accepted: 06/10/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Black sweet corn as an edible fruit has various nutritional qualities. This study discusses changes in the vitamin C and E, folate, and carotenoid content during black sweet corn maturation, and also the effects of preharvest weather conditions and of related genes in multi-vitamin biosynthesis pathways. RESULTS Most vitamin levels improved, especially vitamin C and carotenoid levels, while the folate content dropped rapidly. Transcript levels of most genes in folate biosynthesis showed trends that were similar to the content changes. VTC2 and GLDH, which are regulated by light, had high expression levels leading to an increase in ascorbate content during maturation. γ-Tocotrienol is the main vitamin E component, and HGGT, the key gene controlling the synthesis of tocotrienols, had a much higher expression level than other genes. Lutein and zeaxanthin were the dominant carotenoid components. A rapid reduction in the transcription level of LCYε could result in a lower lutein production rate . CONCLUSION Black sweet corn has a high nutritional value and is rich in vitamins, including zeaxanthin, γ-tocotrienols, and ascorbic acid. The best harvest time is between 20-25 days after pollination (DAPs) when kernels had a good taste as well as relatively high vitamin levels. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Xiaodan Hu
- School of Food Science and Engineering, South China University of Technology, Ministry of Education Engineering Research Centre of Starch and Protein Processing, Guangdong Province Key Laboratory for Green Processing of Natural Products and Product Safety, Overseas Expertise Introduction Center for Discipline Innovation of Food Nutrition and Human Health (111 Center), Guangzhou, China
| | - Jianhua Liu
- Key Laboratory of Crops Genetics Improvement of Guangdong Province, Crop Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Wu Li
- Key Laboratory of Crops Genetics Improvement of Guangdong Province, Crop Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Tianxiang Wen
- Key Laboratory of Crops Genetics Improvement of Guangdong Province, Crop Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Tong Li
- Department of Food Science, Cornell University, Ithaca, NY, USA
| | - Xinbo Guo
- School of Food Science and Engineering, South China University of Technology, Ministry of Education Engineering Research Centre of Starch and Protein Processing, Guangdong Province Key Laboratory for Green Processing of Natural Products and Product Safety, Overseas Expertise Introduction Center for Discipline Innovation of Food Nutrition and Human Health (111 Center), Guangzhou, China
| | - Rui Hai Liu
- Department of Food Science, Cornell University, Ithaca, NY, USA
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54
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Chatzopoulou F, Sanmartin M, Mellidou I, Pateraki I, Koukounaras A, Tanou G, Kalamaki MS, Veljović-Jovanović S, Antić TC, Kostas S, Tsouvaltzis P, Grumet R, Kanellis AK. Silencing of ascorbate oxidase results in reduced growth, altered ascorbic acid levels and ripening pattern in melon fruit. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 156:291-303. [PMID: 32987259 DOI: 10.1016/j.plaphy.2020.08.040] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 08/22/2020] [Accepted: 08/22/2020] [Indexed: 06/11/2023]
Abstract
Ascorbate oxidase (AO, EC 1.10.3.3) is a copper-containing enzyme localized at the apoplast, where it catalyzes the oxidation of ascorbic acid (AA) to dehydroascorbic acid (DHA) via monodehydroascorbic acid (MDHA) intermediate. Despite it has been extensively studied, no biological roles have been definitively ascribed. To understand the role of AO in plant metabolism, fruit growth and physiology, we suppressed AO expression in melon (Cucumis melo L.) fruit. Reduction of AO activity increased AA content in melon fruit, which is the result of repression of AA oxidation and simultaneous induction of certain biosynthetic and recycling genes. As a consequence, ascorbate redox state was altered in the apoplast. Interestingly, transgenic melon fruit displayed increased ethylene production rate coincided with elevated levels of 1-aminocyclopropane-1-carboxylic acid (ACC) oxidase (ACO, EC 1.14.17.4) activity and gene expression, which might contribute to earlier ripening. Moreover, AO suppressed transgenic melon fruit exhibited a dramatic arrest in fruit growth, due to a simultaneous decrease in fruit cell size and in plasmalemma (PM) ATPase activity. All the above, support for the first time, the in vivo AO participation in the rapid fruit growth of Cucurbitaceae and further suggest an alternative route for AA increase in ripening fruit.
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Affiliation(s)
- Fani Chatzopoulou
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece; Laboratory of Microbiology, School of Medicine, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece
| | - Maite Sanmartin
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece; Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universidad Politécnica de Valencia (UPV)-Consejo Superior de Investigaciones Científicas (CSIC), Ciudad Politécnica de la Innovación, Ed. 8E, Ingeniero Fausto Elio s/n, Valencia, Spain.
| | - Ifigeneia Mellidou
- Institute of Plant Breeding and Genetic Resources, HAO ELGO-DEMETER. Thermi, Thessaloniki, 57 001, Greece
| | - Irini Pateraki
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece; Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 1871, Copenhagen, Denmark
| | - Athanasios Koukounaras
- School of Agriculture, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece
| | - Georgia Tanou
- Institute of Soil and Water Resources, HAO ELGO-DEMETER. Thermi, Thessaloniki, 57 001, Greece
| | - Mary S Kalamaki
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece; Division of Science & Technology, American College of Thessaloniki, 17 Sevenidi Street, 55510, Thessaloniki, Greece
| | - Sonja Veljović-Jovanović
- University of Belgrade -Department of Life Sciences, Institute for Multidisciplinary Research, 11000, Belgrade, Serbia
| | - Tijana Cvetić Antić
- University of Belgrade - Faculty of Biology, Studenski Trg 16, 11000, Belgrade, Serbia
| | - Stefanos Kostas
- School of Agriculture, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece
| | - Pavlos Tsouvaltzis
- School of Agriculture, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece
| | - Rebecca Grumet
- Department of Horticulture, Plant and Soil Sciences Building, Michigan State University, East Lansing, MI, 48824, USA
| | - Angelos K Kanellis
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of Thessaloniki, 541 24, Thessaloniki, Greece.
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55
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Vats S, Bansal R, Rana N, Kumawat S, Bhatt V, Jadhav P, Kale V, Sathe A, Sonah H, Jugdaohsingh R, Sharma TR, Deshmukh R. Unexplored nutritive potential of tomato to combat global malnutrition. Crit Rev Food Sci Nutr 2020; 62:1003-1034. [PMID: 33086895 DOI: 10.1080/10408398.2020.1832954] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Tomato, a widely consumed vegetable crop, offers a real potential to combat human nutritional deficiencies. Tomatoes are rich in micronutrients and other bioactive compounds (including vitamins, carotenoids, and minerals) that are known to be essential or beneficial for human health. This review highlights the current state of the art in the molecular understanding of the nutritional aspects, conventional and molecular breeding efforts, and biofortification studies undertaken to improve the nutritional content and quality of tomato. Transcriptomics and metabolomics studies, which offer a deeper understanding of the molecular regulation of the tomato's nutrients, are discussed. The potential uses of the wastes from the tomato processing industry (i.e., the peels and seed extracts) that are particularly rich in oils and proteins are also discussed. Recent advancements with CRISPR/Cas mediated gene-editing technology provide enormous opportunities to enhance the nutritional content of agricultural produces, including tomatoes. In this regard, genome editing efforts with respect to biofortification in the tomato plant are also discussed. The recent technological advancements and knowledge gaps described herein aim to help explore the unexplored nutritional potential of the tomato.
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Affiliation(s)
- Sanskriti Vats
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India
| | - Ruchi Bansal
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India.,Department of Biotechnology, Panjab University, Chandigarh, India
| | - Nitika Rana
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India.,Department of Biotechnology, Panjab University, Chandigarh, India
| | - Surbhi Kumawat
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India.,Department of Biotechnology, Panjab University, Chandigarh, India
| | - Vacha Bhatt
- Department of Botany, Savitribai Phule Pune University, Pune, MS, India
| | - Pravin Jadhav
- Dr. Panjabrao Deshmukh Krishi Vidyapeeth, Akola, MS, India
| | - Vijay Kale
- Dr. Panjabrao Deshmukh Krishi Vidyapeeth, Akola, MS, India
| | - Atul Sathe
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India
| | - Humira Sonah
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India
| | - Ravin Jugdaohsingh
- Biomineral Research Group, Department of Veterinary Medicine, University of Cambridge, Cambridge, UK
| | - Tilak Raj Sharma
- Division of Crop Science, Indian Council of Agricultural Research, New Delhi, India
| | - Rupesh Deshmukh
- National Agri-Food Biotechnology Institute (NABI), Mohali, Punjab, India
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56
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Watanabe M, Walther D, Ueda Y, Kondo K, Ishikawa S, Tohge T, Burgos A, Brotman Y, Fernie AR, Hoefgen R, Wissuwa M. Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. PLANT, CELL & ENVIRONMENT 2020; 43:2066-2079. [PMID: 32361994 DOI: 10.1111/pce.13777] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 04/14/2020] [Accepted: 04/17/2020] [Indexed: 06/11/2023]
Abstract
Utilizing phosphate more efficiently is crucial for sustainable crop production. Highly efficient rice (Oryza sativa) cultivars have been identified and this study aims to identify metabolic markers associated with P utilization efficiency (PUE). P deficiency generally reduced leaf P concentrations and CO2 assimilation rates but efficient cultivars were reducing leaf P concentrations further than inefficient ones while maintaining similar CO2 assimilation rates. Adaptive changes in carbon metabolism were detected but equally in efficient and inefficient cultivar groups. Groups furthermore did not differ with respect to partial substitutions of phospholipids by sulfo- and galactolipids. Metabolites significantly more abundant in the efficient group, such as sinapate, benzoate and glucoronate, were related to antioxidant defence and may help alleviating oxidative stress caused by P deficiency. Sugar alcohols ribitol and threitol were another marker metabolite for higher phosphate efficiency as were several amino acids, especially threonine. Since these metabolites are not known to be associated with P deficiency, they may provide novel clues for the selection of more P efficient genotypes. In conclusion, metabolite signatures detected here were not related to phosphate metabolism but rather helped P efficient lines to keep vital processes functional under the adverse conditions of P starvation.
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Affiliation(s)
- Mutsumi Watanabe
- MPI of Molecular Plant Physiology, Potsdam, Germany
- NARA Institute of Science and Technology, Nara, Japan
| | - Dirk Walther
- MPI of Molecular Plant Physiology, Potsdam, Germany
| | - Yoshiaki Ueda
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
| | - Katsuhiko Kondo
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
| | - Satoru Ishikawa
- National Agriculture and Food Research Organization (NARO), Tsukuba, Japan
| | - Takayuki Tohge
- MPI of Molecular Plant Physiology, Potsdam, Germany
- NARA Institute of Science and Technology, Nara, Japan
| | | | | | | | | | - Matthias Wissuwa
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
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57
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Steelheart C, Alegre ML, Baldet P, Rothan C, Bres C, Just D, Okabe Y, Ezura H, Ganganelli I, Gergoff Grozeff GE, Bartoli CG. The effect of low ascorbic acid content on tomato fruit ripening. PLANTA 2020; 252:36. [PMID: 32767124 DOI: 10.1007/s00425-020-03440-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Accepted: 07/29/2020] [Indexed: 05/08/2023]
Abstract
The oxidant/antioxidant balance affects the ripening time of tomato fruit. Ripening of tomato fruit is associated with several modifications such as loss of cell wall firmness and transformation of chloroplasts to chromoplasts. Besides a peak in H2O2, reactive oxygen species (ROS) are observed at the transition stage. However, the role of different components of oxidative stress metabolism in fruit ripening has been scarcely addressed. Two GDP-L-galactose phosphorylase (GGP) Solanum lycopersicum L. cv Micro-Tom mutants which have fruit with low ascorbic acid content (30% of wild type) were used in this work to unravel the participation of ascorbic acid and H2O2 in fruit maturation. Both GGP mutants show delayed fruit maturation with no peak of H2O2; treatment with ascorbic acid increases its own concentration and accelerates ripening only in mutants to become like wild type plants. Unexpectedly, the treatment with ascorbic acid increases H2O2 synthesis in both mutants resembling what is observed in wild type fruit. Exogenous supplementation with H2O2 decreases its own synthesis delaying fruit maturation in plants with low ascorbic acid content. The site of ROS production is localized in the chloroplasts of fruit of all genotypes as determined by confocal microscopy analysis. The results presented here demonstrate that both ascorbic acid and H2O2 actively participate in tomato fruit ripening.
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Affiliation(s)
- Charlotte Steelheart
- INFIVE, Facultades de Ciencias Agrarias y Forestales y Ciencias Naturales y Museo, Universidad Nacional de La Plata, CCT CONICET, La Plata, Argentina
| | - Matías Leonel Alegre
- INFIVE, Facultades de Ciencias Agrarias y Forestales y Ciencias Naturales y Museo, Universidad Nacional de La Plata, CCT CONICET, La Plata, Argentina
| | - Pierre Baldet
- Institut National de la Recherche Agronomique (INRAE), Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, 33140, Villenave d'Ornon, France
| | - Christophe Rothan
- Institut National de la Recherche Agronomique (INRAE), Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, 33140, Villenave d'Ornon, France
| | - Cecile Bres
- Institut National de la Recherche Agronomique (INRAE), Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, 33140, Villenave d'Ornon, France
| | - Daniel Just
- Institut National de la Recherche Agronomique (INRAE), Université de Bordeaux, UMR 1332 Biologie du Fruit et Pathologie, 33140, Villenave d'Ornon, France
| | - Yoshihiro Okabe
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
- Tsukuba Plant Innovation Research Center, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
| | - Hiroshi Ezura
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
- Tsukuba Plant Innovation Research Center, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
| | - Inti Ganganelli
- INFIVE, Facultades de Ciencias Agrarias y Forestales y Ciencias Naturales y Museo, Universidad Nacional de La Plata, CCT CONICET, La Plata, Argentina
| | - Gustavo Esteban Gergoff Grozeff
- INFIVE, Facultades de Ciencias Agrarias y Forestales y Ciencias Naturales y Museo, Universidad Nacional de La Plata, CCT CONICET, La Plata, Argentina
| | - Carlos Guillermo Bartoli
- INFIVE, Facultades de Ciencias Agrarias y Forestales y Ciencias Naturales y Museo, Universidad Nacional de La Plata, CCT CONICET, La Plata, Argentina.
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58
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Vallarino JG, Merchante C, Sánchez‐Sevilla JF, de Luis Balaguer MA, Pott DM, Ariza MT, Casañal A, Posé D, Vioque A, Amaya I, Willmitzer L, Solano R, Sozzani R, Fernie AR, Botella MA, Giovannoni JJ, Valpuesta V, Osorio S. Characterizing the involvement of FaMADS9 in the regulation of strawberry fruit receptacle development. PLANT BIOTECHNOLOGY JOURNAL 2020; 18:929-943. [PMID: 31533196 PMCID: PMC7061862 DOI: 10.1111/pbi.13257] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Revised: 09/03/2019] [Accepted: 09/08/2019] [Indexed: 05/08/2023]
Abstract
FaMADS9 is the strawberry (Fragaria x ananassa) gene that exhibits the highest homology to the tomato (Solanum lycopersicum) RIN gene. Transgenic lines were obtained in which FaMADS9 was silenced. The fruits of these lines did not show differences in basic parameters, such as fruit firmness or colour, but exhibited lower Brix values in three of the four independent lines. The gene ontology MapMan category that was most enriched among the differentially expressed genes in the receptacles at the white stage corresponded to the regulation of transcription, including a high percentage of transcription factors and regulatory proteins associated with auxin action. In contrast, the most enriched categories at the red stage were transport, lipid metabolism and cell wall. Metabolomic analysis of the receptacles of the transformed fruits identified significant changes in the content of maltose, galactonic acid-1,4-lactone, proanthocyanidins and flavonols at the green/white stage, while isomaltose, anthocyanins and cuticular wax metabolism were the most affected at the red stage. Among the regulatory genes that were differentially expressed in the transgenic receptacles were several genes previously linked to flavonoid metabolism, such as MYB10, DIV, ZFN1, ZFN2, GT2, and GT5, or associated with the action of hormones, such as abscisic acid, SHP, ASR, GTE7 and SnRK2.7. The inference of a gene regulatory network, based on a dynamic Bayesian approach, among the genes differentially expressed in the transgenic receptacles at the white and red stages, identified the genes KAN1, DIV, ZFN2 and GTE7 as putative targets of FaMADS9. A MADS9-specific CArG box was identified in the promoters of these genes.
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Affiliation(s)
- José G. Vallarino
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
| | - Catharina Merchante
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
| | - José F. Sánchez‐Sevilla
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
- Genómica y BiotecnologíaCentro de MálagaInstituto Andaluz de Investigación y Formación Agraria y Pesquera (IFAPA)MálagaSpain
| | - María Angels de Luis Balaguer
- Plant and Microbial Biology DepartmentNorth Carolina State UniversityRaleighNCUSA
- Present address:
Precision Biosciences, Inc.DurhamNCUSA
| | - Delphine M. Pott
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
| | - María T. Ariza
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
| | - Ana Casañal
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
| | - David Posé
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
| | - Amalia Vioque
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
| | - Iraida Amaya
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
- Genómica y BiotecnologíaCentro de MálagaInstituto Andaluz de Investigación y Formación Agraria y Pesquera (IFAPA)MálagaSpain
| | - Lothar Willmitzer
- Max‐Planck‐Institut für Molekulare PflanzenphysiologiePotsdam‐GolmGermany
| | - Roberto Solano
- Departmento de Genética Molecular de PlantasCentro Nacional de BiotecnologíaConsejo Superior de Investigaciones Científicas (CNB‐CSIC)MadridSpain
| | - Rosangela Sozzani
- Plant and Microbial Biology DepartmentNorth Carolina State UniversityRaleighNCUSA
- Biomathematics ProgramNorth Carolina State UniversityRaleighNCUSA
| | - Alisdair R. Fernie
- Max‐Planck‐Institut für Molekulare PflanzenphysiologiePotsdam‐GolmGermany
| | - Miguel A. Botella
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
| | - James J. Giovannoni
- Boyce Thompson Institute for Plant Research and USDA‐ARSRobert W. Holley CenterCornell University CampusIthacaNYUSA
| | - Victoriano Valpuesta
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
| | - Sonia Osorio
- Departamento de Biología Molecular y Bioquímica. Campus de TeatinosInstituto de Hortofruticultura Subtropical y Mediterránea ‘La Mayora’Universidad de Málaga‐Consejo Superior de Investigaciones CientíficasMálagaSpain
- Unidad Asociada IFAPA‐CSIC Biotecnología y Mejora en FresaMálagaSpain
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Minutolo M, Chiaiese P, Di Matteo A, Errico A, Corrado G. Accumulation of Ascorbic Acid in Tomato Cell Culture: Influence of the Genotype, Source Explant and Time of In Vitro Cultivation. Antioxidants (Basel) 2020; 9:antiox9030222. [PMID: 32156031 PMCID: PMC7139686 DOI: 10.3390/antiox9030222] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 02/29/2020] [Accepted: 03/04/2020] [Indexed: 11/25/2022] Open
Abstract
The production and commercialization of natural antioxidants is gaining increasing importance due to their wide range of biological effects and applications. In vitro cell culture is a valuable source of plant bioactive compounds, especially those highly dependent on environmental factors. Nonetheless, research on the accumulation in plant cultured cells of water-soluble antioxidant vitamins, such as the ascorbic acid (AsA), is very limited. Tomato fruits are a main dietary source of vitamin C and in this work, we explored the potential of in vitro cultured cells for AsA accumulation. Specifically, using a full factorial design, we examined the effect of the source explant, the time in tissue culture and the genetic difference present in two Introgression Line (IL7-3 and IL12-4) that harbor Quantitative Trait Loci (QTLs) for ascorbic acid in fruits. Moreover, we performed an expression analysis of genes involved in AsA metabolism to highlight the molecular mechanisms that can account for the difference between fruit explants and calli. Our work indicated that cultured tomato cells accumulate AsA well beyond the amount present in fruits and that the three factors under investigation and their interaction significantly influence AsA accumulation. The time in tissue culture is the main single factor and, different from the expectations for secondary metabolites, explants from unripe, mature green fruits provided the highest increase in AsA. Moreover, in controlled conditions the genetic differences between the ILs and the control genotype are less relevant for calli cultivated for longer time. Our work showed the potential of tomato cell culture to produce AsA and prompt further refinements towards its possible large-scale exploitation.
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Broad RC, Bonneau JP, Hellens RP, Johnson AA. Manipulation of Ascorbate Biosynthetic, Recycling, and Regulatory Pathways for Improved Abiotic Stress Tolerance in Plants. Int J Mol Sci 2020; 21:E1790. [PMID: 32150968 PMCID: PMC7084844 DOI: 10.3390/ijms21051790] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Revised: 02/27/2020] [Accepted: 03/03/2020] [Indexed: 02/03/2023] Open
Abstract
Abiotic stresses, such as drought, salinity, and extreme temperatures, are major limiting factors in global crop productivity and are predicted to be exacerbated by climate change. The overproduction of reactive oxygen species (ROS) is a common consequence of many abiotic stresses. Ascorbate, also known as vitamin C, is the most abundant water-soluble antioxidant in plant cells and can combat oxidative stress directly as a ROS scavenger, or through the ascorbate-glutathione cycle-a major antioxidant system in plant cells. Engineering crops with enhanced ascorbate concentrations therefore has the potential to promote broad abiotic stress tolerance. Three distinct strategies have been utilized to increase ascorbate concentrations in plants: (i) increased biosynthesis, (ii) enhanced recycling, or (iii) modulating regulatory factors. Here, we review the genetic pathways underlying ascorbate biosynthesis, recycling, and regulation in plants, including a summary of all metabolic engineering strategies utilized to date to increase ascorbate concentrations in model and crop species. We then highlight transgene-free strategies utilizing genome editing tools to increase ascorbate concentrations in crops, such as editing the highly conserved upstream open reading frame that controls translation of the GDP-L-galactose phosphorylase gene.
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Affiliation(s)
- Ronan C. Broad
- School of BioSciences, The University of Melbourne, Melbourne, VIC 3010, Australia
| | - Julien P. Bonneau
- School of BioSciences, The University of Melbourne, Melbourne, VIC 3010, Australia
| | - Roger P. Hellens
- Centre for Tropical Crops and Biocommodities, Institute for Future Environments, Queensland University of Technology, Brisbane, QLD 4001, Australia
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Boonchaisri S, Stevenson T, Dias DA. Utilization of GC-MS untargeted metabolomics to assess the delayed response of glufosinate treatment of transgenic herbicide resistant (HR) buffalo grasses (Stenotaphrum secundatum L.). Metabolomics 2020; 16:22. [PMID: 31989303 DOI: 10.1007/s11306-020-1644-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Accepted: 01/22/2020] [Indexed: 12/20/2022]
Abstract
INTRODUCTION Herbicide resistant (HR) buffalo grasses were genetically engineered to resist the non-selective herbicide, glufosinate in order to facilitate a modern, 'weeding program' which is highly effective in terms of minimizing costs and labor. The resistant trait was conferred by an insertion of the pat gene to allow for the production of the enzyme phosphinothricin acetyltransferase (PAT) to detoxify the glufosinate inhibitive effect. To date, there are only a few reports using metabolomics as well as molecular characterizations published for glufosinate-resistant crops with no reports on HR turfgrass. Therefore, for the first time, this study examines the metabolome of glufosinate-resistant buffalo grasses which not only will be useful to future growers but also the scientific community. OBJECTIVE A major aim of this present work is to characterize and evaluate the metabolic alterations which may arise from a genetic transformation of HR buffalo grasses by comprehensively using gas chromatography-mass spectrometry (GC-MS) based untargeted metabolomics. METHODS Eight-week old plants of 4 HR buffalo grasses, (93-1A, 93-2B, 93-3C and 93-5A) and 3 wild type varieties (WT 8-4A, WT 9-1B and WT 9-1B) were selected for physiological, molecular and metabolomics experiments. Plants were either sprayed with 1, 5, 10 and 15% v/v of glufosinate to evaluate the visual injuries or submerged in 5% v/v of glufosinate 3 days prior to a GC-MS based untargeted metabolomics analysis. In contrast, the control group was treated with distilled water. Leaves were extracted in 1:1 methanol:water and then analysed, using an in-house GC-MS untargeted workflow. RESULTS Results identified 199 metabolites with only 6 of them (cis-aconitic acid, allantoin, cellobiose, glyceric acid, maltose and octadecanoic acid) found to be statistically significant (p < 0.05) between the HR and wild type buffalo grass varieties compared to the control experiment. Among these metabolites, unusual accumulation of allantoin was prominent and was an unanticipated effect of the pat gene insertion. As expected, glufosinate treatment caused significant metabolic alterations in the sensitive wild type, with the up-regulation of several amino acids (e.g. phenylalanine and isoleucine) which was likely due to glufosinate-induced senescence. The aminoacyl-tRNA biosynthetic pathway was identified as the most significant enriched pathway as a result of glufosinate effects because a number of its intermediates were amino acids. CONCLUSION HR buffalo grasses were very similar to its wild type comparator based on a comprehensive GC-MS based untargeted metabolomics and therefore, should guarantee the safe use of these HR buffalo grasses. The current metabolomics analyses not only confirmed the effects of glufosinate to up-regulate free amino acid pools in the sensitive wild type but also several alterations in sugar, sugar phosphate and organic acid metabolism have been reported.
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Affiliation(s)
| | - Trevor Stevenson
- School of Science, RMIT University, Bundoora, VIC, 3083, Australia
| | - Daniel A Dias
- School of Health and Biomedical Sciences, Discipline of Laboratory Medicine, RMIT University, PO Box 71, Bundoora, VIC, 3083, Australia.
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Ascorbate and Thiamin: Metabolic Modulators in Plant Acclimation Responses. PLANTS 2020; 9:plants9010101. [PMID: 31941157 PMCID: PMC7020166 DOI: 10.3390/plants9010101] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 01/09/2020] [Accepted: 01/10/2020] [Indexed: 12/12/2022]
Abstract
Cell compartmentalization allows incompatible chemical reactions and localised responses to occur simultaneously, however, it also requires a complex system of communication between compartments in order to maintain the functionality of vital processes. It is clear that multiple such signals must exist, yet little is known about the identity of the key players orchestrating these interactions or about the role in the coordination of other processes. Mitochondria and chloroplasts have a considerable number of metabolites in common and are interdependent at multiple levels. Therefore, metabolites represent strong candidates as communicators between these organelles. In this context, vitamins and similar small molecules emerge as possible linkers to mediate metabolic crosstalk between compartments. This review focuses on two vitamins as potential metabolic signals within the plant cell, vitamin C (L-ascorbate) and vitamin B1 (thiamin). These two vitamins demonstrate the importance of metabolites in shaping cellular processes working as metabolic signals during acclimation processes. Inferences based on the combined studies of environment, genotype, and metabolite, in order to unravel signaling functions, are also highlighted.
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Broad RC, Bonneau JP, Beasley JT, Roden S, Sadowski P, Jewell N, Brien C, Berger B, Tako E, Glahn RP, Hellens RP, Johnson AAT. Effect of Rice GDP-L-Galactose Phosphorylase Constitutive Overexpression on Ascorbate Concentration, Stress Tolerance, and Iron Bioavailability in Rice. FRONTIERS IN PLANT SCIENCE 2020; 11:595439. [PMID: 33343598 PMCID: PMC7744345 DOI: 10.3389/fpls.2020.595439] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2020] [Accepted: 11/16/2020] [Indexed: 05/12/2023]
Abstract
Ascorbate (vitamin C) is an essential multifunctional molecule for both plants and mammals. In plants, ascorbate is the most abundant water-soluble antioxidant that supports stress tolerance. In humans, ascorbate is an essential micronutrient and promotes iron (Fe) absorption in the gut. Engineering crops with increased ascorbate levels have the potential to improve both crop stress tolerance and human health. Here, rice (Oryza sativa L.) plants were engineered to constitutively overexpress the rice GDP-L-galactose phosphorylase coding sequence (35S-OsGGP), which encodes the rate-limiting enzymatic step of the L-galactose pathway. Ascorbate concentrations were negligible in both null segregant (NS) and 35S-OsGGP brown rice (BR, unpolished grain), but significantly increased in 35S-OsGGP germinated brown rice (GBR) relative to NS. Foliar ascorbate concentrations were significantly increased in 35S-OsGGP plants in the vegetative growth phase relative to NS, but significantly reduced at the reproductive growth phase and were associated with reduced OsGGP transcript levels. The 35S-OsGGP plants did not display altered salt tolerance at the vegetative growth phase despite having elevated ascorbate concentrations. Ascorbate concentrations were positively correlated with ferritin concentrations in Caco-2 cells - an accurate predictor of Fe bioavailability in human digestion - exposed to in vitro digests of NS and 35S-OsGGP BR and GBR samples.
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Affiliation(s)
- Ronan C. Broad
- School of Biosciences, The University of Melbourne, Melbourne, VIC, Australia
- *Correspondence: Ronan C. Broad,
| | - Julien P. Bonneau
- School of Biosciences, The University of Melbourne, Melbourne, VIC, Australia
| | - Jesse T. Beasley
- School of Biosciences, The University of Melbourne, Melbourne, VIC, Australia
| | - Sally Roden
- Centre for Agriculture and the Bioeconomy, Institute for Future Environments, Queensland University of Technology, Brisbane, QLD, Australia
| | - Pawel Sadowski
- Central Analytical Research Facility, Institute for Future Environments, Queensland University of Technology, Brisbane, QLD, Australia
| | - Nathaniel Jewell
- Australian Plant Phenomics Facility and School for Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA, Australia
| | - Chris Brien
- Australian Plant Phenomics Facility and School for Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA, Australia
| | - Bettina Berger
- Australian Plant Phenomics Facility and School for Agriculture, Food and Wine, The University of Adelaide, Adelaide, SA, Australia
| | - Elad Tako
- Department of Food Science, Cornell University, Ithaca, NY, United States
| | - Raymond P. Glahn
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Ithaca, NY, United States
| | - Roger P. Hellens
- Centre for Agriculture and the Bioeconomy, Institute for Future Environments, Queensland University of Technology, Brisbane, QLD, Australia
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Broad RC, Bonneau JP, Beasley JT, Roden S, Philips JG, Baumann U, Hellens RP, Johnson AAT. Genome-wide identification and characterization of the GDP-L-galactose phosphorylase gene family in bread wheat. BMC PLANT BIOLOGY 2019; 19:515. [PMID: 31771507 PMCID: PMC6878703 DOI: 10.1186/s12870-019-2123-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Accepted: 11/07/2019] [Indexed: 05/26/2023]
Abstract
BACKGROUND Ascorbate is a powerful antioxidant in plants and an essential micronutrient for humans. The GDP-L-galactose phosphorylase (GGP) gene encodes the rate-limiting enzyme of the L-galactose pathway-the dominant ascorbate biosynthetic pathway in plants-and is a promising gene candidate for increasing ascorbate in crops. In addition to transcriptional regulation, GGP production is regulated at the translational level through an upstream open reading frame (uORF) in the long 5'-untranslated region (5'UTR). The GGP genes have yet to be identified in bread wheat (Triticum aestivum L.), one of the most important food grain sources for humans. RESULTS Bread wheat chromosomal groups 4 and 5 were found to each contain three homoeologous TaGGP genes on the A, B, and D subgenomes (TaGGP2-A/B/D and TaGGP1-A/B/D, respectively) and a highly conserved uORF was present in the long 5'UTR of all six genes. Phylogenetic analyses demonstrated that the TaGGP genes separate into two distinct groups and identified a duplication event of the GGP gene in the ancestor of the Brachypodium/Triticeae lineage. A microsynteny analysis revealed that the TaGGP1 and TaGGP2 subchromosomal regions have no shared synteny suggesting that TaGGP2 may have been duplicated via a transposable element. The two groups of TaGGP genes have distinct expression patterns with the TaGGP1 homoeologs broadly expressed across different tissues and developmental stages and the TaGGP2 homoeologs highly expressed in anthers. Transient transformation of the TaGGP coding sequences in Nicotiana benthamiana leaf tissue increased ascorbate concentrations more than five-fold, confirming their functional role in ascorbate biosynthesis in planta. CONCLUSIONS We have identified six TaGGP genes in the bread wheat genome, each with a highly conserved uORF. Phylogenetic and microsynteny analyses highlight that a transposable element may have been responsible for the duplication and specialized expression of GGP2 in anthers in the Brachypodium/Triticeae lineage. Transient transformation of the TaGGP coding sequences in N. benthamiana demonstrated their activity in planta. The six TaGGP genes and uORFs identified in this study provide a valuable genetic resource for increasing ascorbate concentrations in bread wheat.
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Affiliation(s)
- Ronan C Broad
- School of BioSciences, The University of Melbourne, Melbourne, Victoria, 3010, Australia
| | - Julien P Bonneau
- School of BioSciences, The University of Melbourne, Melbourne, Victoria, 3010, Australia
| | - Jesse T Beasley
- School of BioSciences, The University of Melbourne, Melbourne, Victoria, 3010, Australia
| | - Sally Roden
- Centre for Tropical Crops and Biocommodities, Institute for Future Environments, Queensland University of Technology, Brisbane, Queensland, 4001, Australia
| | - Joshua G Philips
- Centre for Tropical Crops and Biocommodities, Institute for Future Environments, Queensland University of Technology, Brisbane, Queensland, 4001, Australia
| | - Ute Baumann
- School of Agriculture, The University of Adelaide, Adelaide, South Australia, 5064, Australia
| | - Roger P Hellens
- Centre for Tropical Crops and Biocommodities, Institute for Future Environments, Queensland University of Technology, Brisbane, Queensland, 4001, Australia
| | - Alexander A T Johnson
- School of BioSciences, The University of Melbourne, Melbourne, Victoria, 3010, Australia.
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Jia Y, Burbidge CA, Sweetman C, Schutz E, Soole K, Jenkins C, Hancock RD, Bruning JB, Ford CM. An aldo-keto reductase with 2-keto-l-gulonate reductase activity functions in l-tartaric acid biosynthesis from vitamin C in Vitis vinifera. J Biol Chem 2019; 294:15932-15946. [PMID: 31488549 PMCID: PMC6827314 DOI: 10.1074/jbc.ra119.010196] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Revised: 08/22/2019] [Indexed: 12/25/2022] Open
Abstract
Tartaric acid has high economic value as an antioxidant and flavorant in food and wine industries. l-Tartaric acid biosynthesis in wine grape (Vitis vinifera) uses ascorbic acid (vitamin C) as precursor, representing an unusual metabolic fate for ascorbic acid degradation. Reduction of the ascorbate breakdown product 2-keto-l-gulonic acid to l-idonic acid constitutes a critical step in this l-tartaric acid biosynthetic pathway. However, the underlying enzymatic mechanisms remain obscure. Here, we identified a V. vinifera aldo-keto reductase, Vv2KGR, with 2-keto-l-gulonic acid reductase activity. Vv2KGR belongs to the d-isomer-specific 2-hydroxyacid dehydrogenase superfamily and displayed the highest similarity to the hydroxyl pyruvate reductase isoform 2 in Arabidopsis thaliana Enzymatic analyses revealed that Vv2KGR efficiently reduces 2-keto-l-gulonic acid to l-idonic acid and uses NADPH as preferred coenzyme. Moreover, Vv2KGR exhibited broad substrate specificity toward glyoxylate, pyruvate, and hydroxypyruvate, having the highest catalytic efficiency for glyoxylate. We further determined the X-ray crystal structure of Vv2KGR at 1.58 Å resolution. Comparison of the Vv2KGR structure with those of d-isomer-specific 2-hydroxyacid dehydrogenases from animals and microorganisms revealed several unique structural features of this plant hydroxyl pyruvate reductase. Substrate structural analysis indicated that Vv2KGR uses two modes (A and B) to bind different substrates. 2-Keto-l-gulonic acid displayed the lowest predicted free-energy binding to Vv2KGR among all docked substrates. Hence, we propose that Vv2KGR functions in l-tartaric acid biosynthesis. To the best of our knowledge, this is the first report of a d-isomer-specific 2-hydroxyacid dehydrogenase that reduces 2-keto-l-gulonic acid to l-idonic acid in plants.
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Affiliation(s)
- Yong Jia
- Waite Research Institute, School of Agriculture, Food, and Wine, University of Adelaide, Adelaide 5064, Australia
| | - Crista A Burbidge
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Crystal Sweetman
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Emi Schutz
- Waite Research Institute, School of Agriculture, Food, and Wine, University of Adelaide, Adelaide 5064, Australia
| | - Kathy Soole
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Colin Jenkins
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide 5001, Australia
| | - Robert D Hancock
- Cell and Molecular Sciences, James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom
| | - John B Bruning
- Institute of Photonics and Advanced Sensing, School of Biological Sciences, University of Adelaide, Adelaide 5005, Australia
| | - Christopher M Ford
- Waite Research Institute, School of Agriculture, Food, and Wine, University of Adelaide, Adelaide 5064, Australia
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Vitamin C in Plants: From Functions to Biofortification. Antioxidants (Basel) 2019; 8:antiox8110519. [PMID: 31671820 PMCID: PMC6912510 DOI: 10.3390/antiox8110519] [Citation(s) in RCA: 84] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2019] [Revised: 10/25/2019] [Accepted: 10/26/2019] [Indexed: 12/18/2022] Open
Abstract
Vitamin C (l-ascorbic acid) is an excellent free radical scavenger, not only for its capability to donate reducing equivalents but also for the relative stability of the derived monodehydroascorbate radical. However, vitamin C is not only an antioxidant, since it is also a cofactor for numerous enzymes involved in plant and human metabolism. In humans, vitamin C takes part in various physiological processes, such as iron absorption, collagen synthesis, immune stimulation, and epigenetic regulation. Due to the functional loss of the gene coding for l-gulonolactone oxidase, humans cannot synthesize vitamin C; thus, they principally utilize plant-based foods for their needs. For this reason, increasing the vitamin C content of crops could have helpful effects on human health. To achieve this objective, exhaustive knowledge of the metabolism and functions of vitamin C in plants is needed. In this review, the multiple roles of vitamin C in plant physiology as well as the regulation of its content, through biosynthetic or recycling pathways, are analyzed. Finally, attention is paid to the strategies that have been used to increase the content of vitamin C in crops, emphasizing not only the improvement of nutritional value of the crops but also the acquisition of plant stress resistance.
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Du B, Kruse J, Winkler JB, Alfarray S, Schnitzler JP, Ache P, Hedrich R, Rennenberg H. Climate and development modulate the metabolome and antioxidative system of date palm leaves. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:5959-5969. [PMID: 31375818 PMCID: PMC6812712 DOI: 10.1093/jxb/erz361] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Accepted: 07/22/2019] [Indexed: 06/10/2023]
Abstract
Date palms are remarkably tolerant to environmental stresses, but the mechanisms involved remain poorly characterized. Leaf metabolome profiling was therefore performed on mature (ML) and young (YL) leaves of 2-year-old date palm seedlings that had been grown in climate chambers that simulate summer and winter conditions in eastern Saudi Arabia. Cultivation under high temperature (summer climate) resulted in higher YL H2O2 leaf levels despite increases in dehydroascorbate reductase (DHAR) activities. The levels of raffinose and galactinol, tricarboxylic acid cycle intermediates, and total amino acids were higher under these conditions, particularly in YL. The accumulation of unsaturated fatty acids, 9,12-octadecadienoic acid and 9,12,15-octadecatrienoic acid, was lower in ML. In contrast, the amounts of saturated tetradecanoic acid and heptadecanoic acid were increased in YL under summer climate conditions. The accumulation of phenolic compounds was favored under summer conditions, while flavonoids accumulated under lower temperature (winter climate) conditions. YL displayed stronger hydration, lower H2O2 levels, and more negative δ 13C values, indicating effective reactive oxygen species scavenging. These findings, which demonstrate the substantial metabolic adjustments that facilitate tolerance to the high temperatures in YL and ML, suggest that YL may be more responsive to climate change.
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Affiliation(s)
- Baoguo Du
- College of Life Science and Biotechnology, Mianyang Normal University, Mianyang, China
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-Universitat Freiburg, Freiburg, Germany
| | - Joerg Kruse
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-Universitat Freiburg, Freiburg, Germany
| | - Jana Barbro Winkler
- Helmholtz Zentrum München, Research Unit Environmental Simulation (EUS), Institute of Biochemical Plant Pathology, Neuherberg, Germany
| | | | - Joerg-Peter Schnitzler
- Helmholtz Zentrum München, Research Unit Environmental Simulation (EUS), Institute of Biochemical Plant Pathology, Neuherberg, Germany
| | - Peter Ache
- Institute for Molecular Plant Physiology and Biophysics, Biocenter, University of Würzburg, Würzburg, Germany
| | - Rainer Hedrich
- Institute for Molecular Plant Physiology and Biophysics, Biocenter, University of Würzburg, Würzburg, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-Universitat Freiburg, Freiburg, Germany
- King Saud University, Riyadh, Saudi Arabia
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Dos Santos CP, Batista MC, da Cruz Saraiva KD, Roque ALM, de Souza Miranda R, Alexandre E Silva LM, Moura CFH, Alves Filho EG, Canuto KM, Costa JH. Transcriptome analysis of acerola fruit ripening: insights into ascorbate, ethylene, respiration, and softening metabolisms. PLANT MOLECULAR BIOLOGY 2019; 101:269-296. [PMID: 31338671 DOI: 10.1007/s11103-019-00903-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2019] [Accepted: 07/15/2019] [Indexed: 06/10/2023]
Abstract
The first transcriptome coupled to metabolite analyses reveals major trends during acerola fruit ripening and shed lights on ascorbate, ethylene signalling, cellular respiration, sugar accumulation, and softening key regulatory genes. Acerola is a fast growing and ripening fruit that exhibits high amounts of ascorbate. During ripening, the fruit experience high respiratory rates leading to ascorbate depletion and a quickly fragile and perishable state. Despite its growing economic importance, understanding of its developmental metabolism remains obscure due to the absence of genomic and transcriptomic data. We performed an acerola transcriptome sequencing that generated over 600 million reads, 40,830 contigs, and provided the annotation of 25,298 unique transcripts. Overall, this study revealed the main metabolic changes that occur in the acerola ripening. This transcriptional profile linked to metabolite measurements, allowed us to focus on ascorbate, ethylene, respiration, sugar, and firmness, the major metabolism indicators for acerola quality. Our results suggest a cooperative role of several genes involved in AsA biosynthesis (PMM, GMP1 and 3, GME1 and 2, GGP1 and 2), translocation (NAT3, 4, 6 and 6-like) and recycling (MDHAR2 and DHAR1) pathways for AsA accumulation in unripe fruits. Moreover, the association of metabolites with transcript profiles provided a comprehensive understanding of ethylene signalling, respiration, sugar accumulation and softening of acerola, shedding light on promising key regulatory genes. Overall, this study provides a foundation for further examination of the functional significance of these genes to improve fruit quality traits.
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Affiliation(s)
- Clesivan Pereira Dos Santos
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza, Ceará, 60451-970, Brazil
| | - Mathias Coelho Batista
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza, Ceará, 60451-970, Brazil
| | - Kátia Daniella da Cruz Saraiva
- Federal Institute of Education, Science and Technology of Paraíba, Campus Princesa Isabel, Princesa Isabel, Paraíba, Brazil
| | - André Luiz Maia Roque
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza, Ceará, 60451-970, Brazil
| | | | | | | | | | | | - José Hélio Costa
- Functional Genomics and Bioinformatics, Department of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza, Ceará, 60451-970, Brazil.
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Shameh S, Alirezalu A, Hosseini B, Maleki R. Fruit phytochemical composition and color parameters of 21 accessions of five Rosa species grown in North West Iran. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2019; 99:5740-5751. [PMID: 31166009 DOI: 10.1002/jsfa.9842] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2019] [Revised: 05/28/2019] [Accepted: 05/30/2019] [Indexed: 05/25/2023]
Abstract
BACKGROUND The genus Rosa comprises economically important horticultural plants belonging to the family Rosaceae. Recently, the use of different Rosa species has increased owing to their multipurpose properties (ornamental, food and medicinal uses). In this study, 21 accessions of Rosa genotypes were compared for fruit phytochemical composition and color parameters. RESULTS The highest antioxidant activity (37.86 mg AAE g-1 FW) and total phenolic (8.17 mg GAE g-1 FW), total flavonoid (2.53 mg QUE g-1 FW), total carotenoid (20.21 mg g-1 FW) and ascorbic acid (84.27 mg g-1 FW) contents were observed in G20 (R. canina), G8 (R. canina), G9 (R. canina), G5 (R. damascena) and G10 (R. moschata) respectively. Chlorogenic acid and gallic acid were found as the main phenolic constituents of Rosa fruits. High amounts of apigenin, rutin, quercetin, p-coumaric acid, cinnamic acid, chlorogenic acid, caffeic acid and gallic acid were obtained in fruit extracts of G6, G14, G6, G8, G19, G9, G19 and G12 respectively. Moreover, the level of color parameters also varied among genotypes. The highest values of a*, b*, L* and chroma were obtained in G4 (R. canina). Based on hierarchical clustering analysis with heat-map, five groups of accessions were identified. CONCLUSION Different Rosa genotypes are rich in certain phytochemical compounds, with significant variations in their levels being observed. Hence evaluation of Rosa genetic resources can supply valuable data for screening accessions containing high levels of individual phenolics, antioxidants and other bioactive compounds for use in breeding programs and food and pharma industries. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Shahla Shameh
- Department of Horticultural Sciences, Faculty of Agriculture, Urmia University, Urmia, Iran
| | - Abolfazl Alirezalu
- Department of Horticultural Sciences, Faculty of Agriculture, Urmia University, Urmia, Iran
| | - Bahman Hosseini
- Department of Horticultural Sciences, Faculty of Agriculture, Urmia University, Urmia, Iran
| | - Ramin Maleki
- Research Department of Chromatography, Iranian Academic Center for Education, Culture and Research (ACECR), Urmia, Iran
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Song W, Wang F, Chen L, Ma R, Zuo X, Cao A, Xie S, Chen X, Jin X, Li H. GhVTC1, the Key Gene for Ascorbate Biosynthesis in Gossypium hirsutum, Involves in Cell Elongation Under Control of Ethylene. Cells 2019; 8:cells8091039. [PMID: 31492030 PMCID: PMC6769745 DOI: 10.3390/cells8091039] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 08/28/2019] [Accepted: 09/04/2019] [Indexed: 02/02/2023] Open
Abstract
L-Ascorbate (Asc) plays important roles in cell growth and plant development, and its de novo biosynthesis was catalyzed by the first rate-limiting enzyme VTC1. However, the function and regulatory mechanism of VTC1 involved in cell development is obscure in Gossypium hirsutum. Herein, the Asc content and AsA/DHA ratio were accumulated and closely linked with fiber development. The GhVTC1 encoded a typical VTC1 protein with functional conserved domains and expressed preferentially during fiber fast elongation stages. Functional complementary analysis of GhVTC1 in the loss-of-function Arabidopsis vtc1-1 mutants indicated that GhVTC1 is genetically functional to rescue the defects of mutants to normal or wild type (WT). The significant shortened primary root in vtc1-1 mutants was promoted to the regular length of WT by the ectopic expression of GhVTC1 in the mutants. Additionally, GhVTC1 expression was induced by ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC), and the GhVTC1 promoter showed high activity and included two ethylene-responsive elements (ERE). Moreover, the 5'-truncted promoters containing the ERE exhibited increased activity by ACC treatment. Our results firstly report the cotton GhVTC1 function in promoting cell elongation at the cellular level, and serve as a foundation for further understanding the regulatory mechanism of Asc-mediated cell growth via the ethylene signaling pathway.
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Affiliation(s)
- Wangyang Song
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Fei Wang
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Lihua Chen
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Rendi Ma
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Xiaoyu Zuo
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Aiping Cao
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Shuangquan Xie
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Xifeng Chen
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China
| | - Xiang Jin
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China.
- Ministry of Education Key Laboratory for Ecology of Tropical Islands, College of Life Sciences, Hainan Normal University, Haikou 571158, China.
| | - Hongbin Li
- College of Life Sciences, Key Laboratory of Xinjiang Phytomedicine Resource and Utilization of Ministry of Education, Shihezi University, Shihezi 832003, China.
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71
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Ali B, Pantha S, Acharya R, Ueda Y, Wu LB, Ashrafuzzaman M, Ishizaki T, Wissuwa M, Bulley S, Frei M. Enhanced ascorbate level improves multi-stress tolerance in a widely grown indica rice variety without compromising its agronomic characteristics. JOURNAL OF PLANT PHYSIOLOGY 2019; 240:152998. [PMID: 31226542 DOI: 10.1016/j.jplph.2019.152998] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Revised: 06/06/2019] [Accepted: 06/07/2019] [Indexed: 05/26/2023]
Abstract
A biotechnological approach was adopted for increasing foliar ascorbate levels as a strategy to adapt a widely grown high yielding rice variety to multiple abiotic stresses. The variety IR64 (Oryza sativa L. ssp. indica) was engineered to express the ascorbate biosynthesis gene GDP-L-galactose phosphorylase (AcGGP) from kiwifruit (Actinidia chinensis Planch.) under the control of a leaf-specific promoter of the Leaf Panicle 2 (LP2) gene. Transgene expression increased foliar ascorbate levels up to >2.5 fold but did not lead to any changes in morphological traits (seed yield, sterility rate, grain weight, and biomass) in non-stress conditions. We then hypothesized that enhanced foliar ascorbate would confer multi-stress tolerance. Indeed transgenic lines were more tolerant to salinity in terms of lipid peroxidation and foliar symptoms, and to drought in terms of lipid peroxidation and post-drought recovery (number of dead leaves). A significantly better performance in ozone stress was seen only when ozone coincided with salinity. However, no differences between transgenic lines and wild types occurred when plants were subjected to toxicities in redox-active transition metals, i.e. iron and manganese, although plants showed clear symptoms of oxidative stress. Moreover, no differential response to zinc deficiency was observed, because the background genotype IR64 was not sensitive to this stress. Taken together, our study helps to identify stress conditions that can be mitigated by enhancing foliar ascorbate levels, and therefore facilitates an adaptive breeding approach for multiple stresses that would not imply any yield penalty.
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Affiliation(s)
- Basharat Ali
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany; Department of Agronomy, University of Agriculture Faisalabad 38040, Pakistan
| | - Sumitra Pantha
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany; Nepal Agricultural Research Council, Nepal
| | - Roshan Acharya
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany
| | - Yoshiaki Ueda
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany
| | - Lin-Bo Wu
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany
| | - Md Ashrafuzzaman
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany
| | - Takuma Ishizaki
- Japan International Research Center for Agricultural Sciences (JIRCAS), Ishigaki, Japan
| | - Matthias Wissuwa
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
| | - Sean Bulley
- Plant and Food Research Ltd., Te Puke, New Zealand
| | - Michael Frei
- Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Germany.
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72
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McCallum J, Laing W, Bulley S, Thomson S, Catanach A, Shaw M, Knaebel M, Tahir J, Deroles S, Timmerman-Vaughan G, Crowhurst R, Hilario E, Chisnall M, Lee R, Macknight R, Seal A. Molecular Characterisation of a Supergene Conditioning Super-High Vitamin C in Kiwifruit Hybrids. PLANTS (BASEL, SWITZERLAND) 2019; 8:E237. [PMID: 31336644 PMCID: PMC6681377 DOI: 10.3390/plants8070237] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Revised: 07/15/2019] [Accepted: 07/16/2019] [Indexed: 12/20/2022]
Abstract
During analysis of kiwifruit derived from hybrids between the high vitamin C (ascorbic acid; AsA) species Actinidia eriantha and A. chinensis, we observed bimodal segregation of fruit AsA concentration suggesting major gene segregation. To test this hypothesis, we performed whole-genome sequencing on pools of hybrid genotypes with either high or low AsA fruit. Pool-GWAS (genome-wide association study) revealed a single Quantitative Trait Locus (QTL) spanning more than 5 Mbp on chromosome 26, which we denote as qAsA26.1. A co-dominant PCR marker was used to validate this association in four diploid (A. chinensis × A. eriantha) × A. chinensis backcross families, showing that the A. eriantha allele at this locus increases fruit AsA levels by 250 mg/100 g fresh weight. Inspection of genome composition and recombination in other A. chinensis genetic maps confirmed that the qAsA26.1 region bears hallmarks of suppressed recombination. The molecular fingerprint of this locus was examined in leaves of backcross validation families by RNA sequencing (RNASEQ). This confirmed strong allelic expression bias across this region as well as differential expression of transcripts on other chromosomes. This evidence suggests that the region harbouring qAsA26.1 constitutes a supergene, which may condition multiple pleiotropic effects on metabolism.
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Affiliation(s)
- John McCallum
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 4704, Christchurch 8140, New Zealand.
- Biochemistry Department, University of Otago, Dunedin 9054, New Zealand.
| | - William Laing
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North 4442, New Zealand
| | - Sean Bulley
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North 4442, New Zealand
| | - Susan Thomson
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 4704, Christchurch 8140, New Zealand
| | - Andrew Catanach
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 4704, Christchurch 8140, New Zealand
| | - Martin Shaw
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 4704, Christchurch 8140, New Zealand
| | - Mareike Knaebel
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North 4442, New Zealand
| | - Jibran Tahir
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North 4442, New Zealand
| | - Simon Deroles
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 11600, Palmerston North 4442, New Zealand
| | - Gail Timmerman-Vaughan
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 4704, Christchurch 8140, New Zealand
| | - Ross Crowhurst
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 92169, Auckland Mail Centre, Auckland 1142, New Zealand
| | - Elena Hilario
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, Private Bag 92169, Auckland Mail Centre, Auckland 1142, New Zealand
| | - Matthew Chisnall
- Biochemistry Department, University of Otago, Dunedin 9054, New Zealand
| | - Robyn Lee
- Biochemistry Department, University of Otago, Dunedin 9054, New Zealand
| | - Richard Macknight
- Biochemistry Department, University of Otago, Dunedin 9054, New Zealand
| | - Alan Seal
- New Cultivar Innovation, The New Zealand Institute for Plant & Food Research Limited, 412 No 1 Road, RD 2 Te Puke 3182, New Zealand
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73
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Characterization of the First Bacterial and Thermostable GDP-Mannose 3,5-Epimerase. Int J Mol Sci 2019; 20:ijms20143530. [PMID: 31330931 PMCID: PMC6678494 DOI: 10.3390/ijms20143530] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Revised: 07/16/2019] [Accepted: 07/18/2019] [Indexed: 01/25/2023] Open
Abstract
GDP-mannose 3,5-epimerase (GM35E) catalyzes the conversion of GDP-mannose towards GDP-l-galactose and GDP-l-gulose. Although this reaction represents one of the few enzymatic routes towards the production of l-sugars and derivatives, it has not yet been exploited for that purpose. One of the reasons is that so far only GM35Es from plants have been characterized, yielding biocatalysts that are relatively unstable and difficult to express heterologously. Through the mining of sequence databases, we succeeded in identifying a promising bacterial homologue. The gene from the thermophilic organism Methylacidiphilum fumariolicum was codon optimized for expression in Escherichia coli, resulting in the production of 40 mg/L of recombinant protein. The enzyme was found to act as a self-sufficient GM35E, performing three chemical reactions in the same active site. Furthermore, the biocatalyst was highly stable at temperatures up to 55 °C, making it well suited for the synthesis of new carbohydrate products with application in the pharma industry.
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74
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Chiaiese P, Corrado G, Minutolo M, Barone A, Errico A. Transcriptional Regulation of Ascorbic Acid During Fruit Ripening in Pepper ( Capsicum annuum) Varieties with Low and High Antioxidants Content. PLANTS (BASEL, SWITZERLAND) 2019; 8:E206. [PMID: 31277433 PMCID: PMC6681188 DOI: 10.3390/plants8070206] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Revised: 06/27/2019] [Accepted: 07/01/2019] [Indexed: 12/24/2022]
Abstract
Research on plant antioxidants, such as ascorbic acid (AsA) and polyphenols, is of increasing interest in plant science because of the health benefits and preventive role in chronic diseases of these natural compounds. Pepper (Capiscum annuum L.) is a major dietary source of antioxidants, especially AsA. Although considerable advance has been made, our understanding of AsA biosynthesis and its regulation in higher plants is not yet exhaustive. For instance, while it is accepted that AsA content in cells is regulated at different levels (e.g., transcriptional and post-transcriptional), their relative prominence is not fully understood. In this work, we identified and studied two pepper varieties with low and high levels of AsA to shed light on the transcriptional mechanisms that can account for the observed phenotypes. We quantified AsA and polyphenols in leaves and during fruit maturation, and concurrently, we analyzed the transcription of 14 genes involved in AsA biosynthesis, degradation, and recycling. The differential transcriptional analysis indicated that the higher expression of genes involved in AsA accumulation is a likely explanation for the observed differences in fruits. This was also supported by the identification of gene-metabolite relations, which deserve further investigation. Our results provide new insights into AsA differential accumulation in pepper varieties and highlight the phenotypic diversity in local germplasm, a knowledge that may ultimately contribute to the increased level of health-related phytochemicals.
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Affiliation(s)
- Pasquale Chiaiese
- Dipartimento di Agraria, Università degli Studi di Napoli "Federico II", via Università 100, 80055 Portici (NA), Italy.
| | - Giandomenico Corrado
- Dipartimento di Agraria, Università degli Studi di Napoli "Federico II", via Università 100, 80055 Portici (NA), Italy
| | - Maria Minutolo
- Dipartimento di Agraria, Università degli Studi di Napoli "Federico II", via Università 100, 80055 Portici (NA), Italy
| | - Amalia Barone
- Dipartimento di Agraria, Università degli Studi di Napoli "Federico II", via Università 100, 80055 Portici (NA), Italy
| | - Angela Errico
- Dipartimento di Agraria, Università degli Studi di Napoli "Federico II", via Università 100, 80055 Portici (NA), Italy
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75
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Bellini E, De Tullio MC. Ascorbic Acid and Ozone: Novel Perspectives to Explain an Elusive Relationship. PLANTS 2019; 8:plants8050122. [PMID: 31075980 PMCID: PMC6572677 DOI: 10.3390/plants8050122] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 05/06/2019] [Accepted: 05/08/2019] [Indexed: 12/23/2022]
Abstract
A huge amount of studies highlighted the importance of high ascorbic acid (AA) content in ozone tolerance, yet the relationship between them appears more complex than a simple direct correlation. Sometimes the connection is clear, for example, two Arabidopsis mutants defective in the main AA biosynthetic pathway (vtc mutants) were identified by means of their ozone sensitivity. However, some low-AA containing mutants are relatively tolerant, suggesting that AA location/availability could be more relevant than total content. A clear distinction should also be made between ozone tolerance obtained when AA content is increased by experimental supplementation (exogenous AA), and the physiological role of plant-synthesized AA (endogenous AA), whose amount is apparently subjected to tight regulation. Recent findings about the role of AA in signal transduction and epigenetic regulation of gene expression open new routes to further research.
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Affiliation(s)
- Erika Bellini
- Department of Biology, University of Rome 'Tor Vergata', 00133 Rome, Italy.
- Department of Biology, University of Pisa, 56126 Pisa, Italy.
| | - Mario C De Tullio
- Department of Earth and Environmental Sciences, University of Bari, 70125 Bari, Italy.
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76
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Ye J, Li W, Ai G, Li C, Liu G, Chen W, Wang B, Wang W, Lu Y, Zhang J, Li H, Ouyang B, Zhang H, Fei Z, Giovannoni JJ, Ye Z, Zhang Y. Genome-wide association analysis identifies a natural variation in basic helix-loop-helix transcription factor regulating ascorbate biosynthesis via D-mannose/L-galactose pathway in tomato. PLoS Genet 2019; 15:e1008149. [PMID: 31067226 PMCID: PMC6527244 DOI: 10.1371/journal.pgen.1008149] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Revised: 05/20/2019] [Accepted: 04/23/2019] [Indexed: 02/02/2023] Open
Abstract
Tomato (Solanum lycopersicum) is one of the highest-value vegetable crops worldwide. Understanding the genetic regulation of primary metabolite levels can inform efforts aimed toward improving the nutrition of commercial tomato cultivars, while maintaining key traits such as yield and stress tolerance. We identified 388 suggestive association loci (including 126 significant loci) for 92 metabolic traits including nutrition and flavor-related loci by genome-wide association study from 302 accessions in two different environments. Among them, an ascorbate quantitative trait locus TFA9 (TOMATOFRUITASCORBATEON CHROMOSOME9) co-localized with SlbHLH59, which promotes high ascorbate accumulation by directly binding to the promoter of structural genes involved in the D-mannose/L-galactose pathway. The causal mutation of TFA9 is an 8-bp InDel, named InDel_8, located in the promoter region of SlbHLH59 and spanned a 5’UTR Py-rich stretch motif affecting its expression. Phylogenetic analysis revealed that differentially expressed SlbHLH59 alleles were selected during tomato domestication. Our results provide a dramatic illustration of how ascorbate biosynthesis can be regulated and was selected during the domestication of tomato. Furthermore, the findings provide novel genetic insights into natural variation of metabolites in tomato fruit, and will promote efficient utilization of metabolite traits in tomato improvement. Deciphering the diverse, interconnected plant metabolome can facilitate crop improvement. In this study, the use of a combination of multiple technologies has allowed us to obtain novel functional and genetic insights into our GWAS investigating variation in ascorbate accumulation in tomato. The InDel_8 in the promoter of SlbHLH59 was selected during tomato domestication and determines fruit ascorbate content by directly regulating the expression of structural genes involved in ascorbate biosynthesis in tomato fruit. The genes and polymorphisms responsible for the variations identified in this study lay the foundation for further comparative genomic studies and for improving nutrition quality in tomato and other fruit crops.
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Affiliation(s)
- Jie Ye
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China.,Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, United States of America
| | - Wangfang Li
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Guo Ai
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Changxing Li
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Genzhong Liu
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Weifang Chen
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Bing Wang
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Wenqian Wang
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Yongen Lu
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Junhong Zhang
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Hanxia Li
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Bo Ouyang
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Hongyan Zhang
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Zhangjun Fei
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, United States of America
| | - James J Giovannoni
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, United States of America.,Robert W. Holley Center, US Department of Agriculture-Agricultural Research Service, Ithaca, New York, United States of America
| | - Zhibiao Ye
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Yuyang Zhang
- The Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
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Chen B, Yin G, Whelan J, Zhang Z, Xin X, He J, Chen X, Zhang J, Zhou Y, Lu X. Composition of Mitochondrial Complex I during the Critical Node of Seed Aging in Oryza sativa. JOURNAL OF PLANT PHYSIOLOGY 2019; 236:7-14. [PMID: 30840921 DOI: 10.1016/j.jplph.2019.02.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2018] [Revised: 01/20/2019] [Accepted: 02/19/2019] [Indexed: 05/10/2023]
Abstract
Previous studies have documented mitochondrial dysfunction during the critical node (CN) of rice (Oryza sativa) seed aging, including a decrease in the capacity of NADH dependent O2 consumption. This raises the hypothesis that changes in the activity of NADH:ubiquinone oxidoreductase (complex I) may play a role in seed aging. The composition and activity of complex I was investigated at the CN of aged rice seeds. Using BN-PAGE and SWATH-MS 52 complex I subunits were identified, nineteen for the first time to be experimentally detected in rice. The subunits of the matrix arm (N and Q modules) were reduced in abundance at the CN, in accordance with a reduction in the capacity to oxidise NADH, reducing substrate oxidation and increase ROS accumulation. In contrast, subunits in the P module increased in abundance that contains many mitochondrial encoded subunits. It is proposed that the changes in complex I abundance subunits may indicate a premature re-activation of mitochondrial biogenesis, as evidenced by the increase in mitochondrial encoded subunits. This premature activation of mitochondrial biogenesis may under-pin the decreased viability of aged seeds, as mitochondrial biogenesis is a crucial event in germination to drive growth before autotrophic growth of the seedling is established.
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Affiliation(s)
- Baoyin Chen
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crop, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China; National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China; Fujian Provincial Key Laboratory of Crop Breeding by Design, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Guangkun Yin
- National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - James Whelan
- Australian Research Council Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Bundoora, Victoria 3083, Australia
| | - Zesen Zhang
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crop, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China; National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China; Fujian Provincial Key Laboratory of Crop Breeding by Design, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Xia Xin
- National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Juanjuan He
- National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Xiaoling Chen
- National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Jinmei Zhang
- National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Yuanchang Zhou
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crop, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China; Fujian Provincial Key Laboratory of Crop Breeding by Design, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Xinxiong Lu
- National Crop Genebank, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
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78
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Genome-wide analysis in Hevea brasiliensis laticifers revealed species-specific post-transcriptional regulations of several redox-related genes. Sci Rep 2019; 9:5701. [PMID: 30952924 PMCID: PMC6450977 DOI: 10.1038/s41598-019-42197-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Accepted: 03/25/2019] [Indexed: 11/09/2022] Open
Abstract
MicroRNA-mediated post-transcriptional regulation has been reported on ROS production and scavenging systems. Although microRNAs first appeared highly conserved among plant species, several aspects of biogenesis, function and evolution of microRNAs were shown to differ. High throughput transcriptome and degradome analyses enable to identify small RNAs and their mRNA targets. A non-photosynthetic tissue particularly prone to redox reactions, laticifers from Hevea brasiliensis, revealed species-specific post-transcriptional regulations. This paper sets out to identify the 407 genes of the thirty main redox-related gene families harboured by the Hevea genome. There are 161 redox-related genes expressed in latex. Thirteen of these redox-related genes were targeted by 11 microRNAs. To our knowledge, this is the first report on a mutation in the miR398 binding site of the cytosolic CuZnSOD. A working model was proposed for transcriptional and post-transcriptional regulation with respect to the predicted subcellular localization of deduced proteins.
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Lu Y, Chang X, Guo X. Dynamic Changes of Ascorbic Acid, Phenolics Biosynthesis and Antioxidant Activities in Mung Beans ( Vigna radiata) until Maturation. PLANTS (BASEL, SWITZERLAND) 2019; 8:E75. [PMID: 30934563 PMCID: PMC6473823 DOI: 10.3390/plants8030075] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Revised: 03/13/2019] [Accepted: 03/22/2019] [Indexed: 11/17/2022]
Abstract
To better understand the regulatory mechanism of phenolics and ascorbic acid accumulation as well as antioxidant activities in mung beans during legume development, the gene expression profiles of 25 key-coding genes in ascorbic acid and phenolics metabolic pathways were analyzed. As well as the dynamitic changes of ascorbic acid, phenolic profiles and antioxidant activities with legume development were studied. The results indicated that gene expression profiles were closely related to the ascorbic acid and phenolics accumulation regularity during legume development. VrVTC2 and VrGME played important roles for ascorbic acid accumulation from 8 to 17 days after flowering (DAF). VrPAL and VrCHS exhibited positive correlations with daidzein and glycitin accumulation, and VrIFS had a strong positive correlation with glycitin biosynthesis. Antioxidant activities dramatically increased during mung bean maturing, which were significantly related to ascorbic acid and phenolics accumulation. Eight days after flowering was the essential stage for ascorbic acid and phenolics biosynthesis in mung beans.
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Affiliation(s)
- Yanyan Lu
- School of Food Science and Engineering, South China University of Technology, Guangzhou 510641, China.
- Overseas Expertise Introduction Center for Discipline Innovation of Food Nutrition and Human Health (111 Center), Guangzhou 510641, China.
| | - Xiaoxiao Chang
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China.
- Key laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization (MOA), Guangzhou 510640, China.
- Guangdong Province Key Laboratory of Tropical and Subtropical Fruit Tree Research, Guangzhou 510640, China.
| | - Xinbo Guo
- School of Food Science and Engineering, South China University of Technology, Guangzhou 510641, China.
- Overseas Expertise Introduction Center for Discipline Innovation of Food Nutrition and Human Health (111 Center), Guangzhou 510641, China.
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80
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Liu Z, Lv J, Zhang Z, Li H, Yang B, Chen W, Dai X, Li X, Yang S, Liu L, Ou L, Ma Y, Zou X. Integrative Transcriptome and Proteome Analysis Identifies Major Metabolic Pathways Involved in Pepper Fruit Development. J Proteome Res 2019; 18:982-994. [DOI: 10.1021/acs.jproteome.8b00673] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Zhoubin Liu
- Longping Branch, Graduate School of Hunan University, Changsha 410125, China
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Junheng Lv
- Longping Branch, Graduate School of Hunan University, Changsha 410125, China
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Zhuqing Zhang
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Heng Li
- Shanghai Applied Protein Technology Co. Ltd, Shanghai 200233, P.R. China
| | - Bozhi Yang
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Wenchao Chen
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Xiongze Dai
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Xuefeng Li
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Sha Yang
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Li Liu
- Shanghai Applied Protein Technology Co. Ltd, Shanghai 200233, P.R. China
| | - Lijun Ou
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Yanqing Ma
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
| | - Xuexiao Zou
- Longping Branch, Graduate School of Hunan University, Changsha 410125, China
- Vegetable Institution of Hunan Academy of Agricultural Science, Changsha 410125, China
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81
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Sacco A, Raiola A, Calafiore R, Barone A, Rigano MM. New insights in the control of antioxidants accumulation in tomato by transcriptomic analyses of genotypes exhibiting contrasting levels of fruit metabolites. BMC Genomics 2019; 20:43. [PMID: 30646856 PMCID: PMC6332538 DOI: 10.1186/s12864-019-5428-4] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Accepted: 01/02/2019] [Indexed: 01/31/2023] Open
Abstract
Background Tomato is an economically important crop with fruits that are a significant source of bioactive compounds such as ascorbic acid and phenolics. Nowadays, the majority of the enzymes of the biosynthetic pathways and of the structural genes controlling the production and the accumulation of antioxidants in plants are known; however, the mechanisms that regulate the expression of these genes are yet to be investigated. Here, we analyzed the transcriptomic changes occurring during ripening in the fruits of two tomato cultivars (E1 and E115), characterized by a different accumulation of antioxidants, in order to identify candidate genes potentially involved in the biosynthesis of ascorbic acid and phenylpropanoids. Results RNA sequencing analyses allowed identifying several structural and regulator genes putatively involved in ascorbate and phenylpropanoids biosynthesis in tomato fruits. Furthermore, transcription factors that may control antioxidants biosynthesis were identified through a weighted gene co-expression network analysis (WGCNA). Results obtained by RNA-seq and WGCNA analyses were further confirmed by RT-qPCR carried out at different ripening stages on ten cultivated tomato genotypes that accumulate different amount of bioactive compounds in the fruit. These analyses allowed us to identify one pectin methylesterase, which may affect the release of pectin-derived D-Galacturonic acid as metabolic precursor of ascorbate biosynthesis. Results reported in the present work allowed also identifying one L-ascorbate oxidase, which may favor the accumulation of reduced ascorbate in tomato fruits. Finally, the pivotal role of the enzymes chalcone synthases (CHS) in controlling the accumulation of phenolic compounds in cultivated tomato genotypes and the transcriptional control of the CHS genes exerted by Myb12 were confirmed. Conclusions By using transcriptomic analyses, candidate genes encoding transcription factors and structural genes were identified that may be involved in the accumulation of ascorbic acid and phenylpropanoids in tomato fruits of cultivated genotypes. These analyses provided novel insights into the molecular mechanisms controlling antioxidants accumulation in ripening tomato fruits. The structural genes and regulators here identified could also be used as efficient genetic markers for selecting high antioxidants tomato cultivars. Electronic supplementary material The online version of this article (10.1186/s12864-019-5428-4) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Adriana Sacco
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Assunta Raiola
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Roberta Calafiore
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Amalia Barone
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy.
| | - Maria Manuela Rigano
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
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82
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Wang J, Huang R. Modulation of Ethylene and Ascorbic Acid on Reactive Oxygen Species Scavenging in Plant Salt Response. FRONTIERS IN PLANT SCIENCE 2019; 10:319. [PMID: 30936887 PMCID: PMC6431634 DOI: 10.3389/fpls.2019.00319] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2018] [Accepted: 02/27/2019] [Indexed: 05/06/2023]
Abstract
Salt stress causes retarded plant growth and reduced crop yield. A complicated regulation network to response to salt stress has been evolved in plants under high salinity conditions. Ethylene is one of the most important phytohormones, playing a major role in salt stress response. An increasing number of studies have demonstrated that ethylene modulates salt tolerance through reactive oxygen species (ROS) homeostasis. Ascorbic acid (AsA) is a non-enzymatic antioxidant, contributing to ROS-scavenging and salt tolerance. Here, we mainly focus on the advances in understanding the modulation of ethylene and AsA on ROS-scavenging under salinity stress. We also review the regulators involved in the ethylene signaling pathway and AsA biosynthesis that respond to salt stress. Moreover, the AsA pool is affected by many environmental conditions, and the potential role of ethylene in AsA production is also extensively discussed. Novel insights into the roles and mechanisms of ethylene in AsA-mediated ROS homeostasis will provide critical information for improving crop salt tolerance.
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Affiliation(s)
- Juan Wang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility for Crop Gene Resources and Genetic Improvement, Beijing, China
| | - Rongfeng Huang
- Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, China
- National Key Facility for Crop Gene Resources and Genetic Improvement, Beijing, China
- *Correspondence: Rongfeng Huang,
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Strobbe S, De Lepeleire J, Van Der Straeten D. From in planta Function to Vitamin-Rich Food Crops: The ACE of Biofortification. FRONTIERS IN PLANT SCIENCE 2018; 9:1862. [PMID: 30619424 PMCID: PMC6305313 DOI: 10.3389/fpls.2018.01862] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Accepted: 12/03/2018] [Indexed: 05/11/2023]
Abstract
Humans are highly dependent on plants to reach their dietary requirements, as plant products contribute both to energy and essential nutrients. For many decades, plant breeders have been able to gradually increase yields of several staple crops, thereby alleviating nutritional needs with varying degrees of success. However, many staple crops such as rice, wheat and corn, although delivering sufficient calories, fail to satisfy micronutrient demands, causing the so called 'hidden hunger.' Biofortification, the process of augmenting nutritional quality of food through the use of agricultural methodologies, is a pivotal asset in the fight against micronutrient malnutrition, mainly due to vitamin and mineral deficiencies. Several technical advances have led to recent breakthroughs. Nutritional genomics has come to fruition based on marker-assisted breeding enabling rapid identification of micronutrient related quantitative trait loci (QTL) in the germplasm of interest. As a complement to these breeding techniques, metabolic engineering approaches, relying on a continuously growing fundamental knowledge of plant metabolism, are able to overcome some of the inevitable pitfalls of breeding. Alteration of micronutrient levels does also require fundamental knowledge about their role and influence on plant growth and development. This review focuses on our knowledge about provitamin A (beta-carotene), vitamin C (ascorbate) and the vitamin E group (tocochromanols). We begin by providing an overview of the functions of these vitamins in planta, followed by highlighting some of the achievements in the nutritional enhancement of food crops via conventional breeding and genetic modification, concluding with an evaluation of the need for such biofortification interventions. The review further elaborates on the vast potential of creating nutritionally enhanced crops through multi-pathway engineering and the synergistic potential of conventional breeding in combination with genetic engineering, including the impact of novel genome editing technologies.
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84
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Zechmann B. Compartment-Specific Importance of Ascorbate During Environmental Stress in Plants. Antioxid Redox Signal 2018; 29:1488-1501. [PMID: 28699398 DOI: 10.1089/ars.2017.7232] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
SIGNIFICANCE Ascorbate is an essential antioxidant in plants. Total contents and its redox state in organelles are crucial to fight and signal oxidative stress. Recent Advances: With quantitative immunoelectron microscopy and biochemical methods, highest ascorbate contents have recently been measured in peroxisomes (23 mM) and the cytosol (22 mM), lowest ones in vacuoles (2 mM), and intermediate concentrations (4-16 mM) in all other organelles. CRITICAL ISSUES The accumulation of ascorbate in chloroplasts and peroxisomes is crucial for plant defense. Its depletion in chloroplasts, peroxisomes, and mitochondria during biotic stress leads to the accumulation of reactive oxygen species (ROS) and the development of chlorosis and necrosis. In the apoplast and vacuoles, ascorbate is the most important antioxidant for the detoxification of ROS. The cytosol acts as a hub for ascorbate metabolism as it reduces its oxidized forms that are produced in the cytosol or imported from other cell compartments. It is a sink for ascorbate that is produced in mitochondria, distributes ascorbate to all organelles, and uses ascorbate to detoxify ROS. As ascorbate and its redox state are involved in protein synthesis and modifications, it can be concluded that ascorbate in the cytosol senses oxidative stress and regulates plant growth, development, and defense. FUTURE DIRECTIONS Future research should focus on (1) dissecting roles of ascorbate in vacuoles and the lumen of the endoplasmic reticulum, (2) identifying the physiological relevance of ascorbate transporters, and (3) correlating current data with changes in the subcellular distribution of related enzymes, ROS, and gene expression patterns.
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Affiliation(s)
- Bernd Zechmann
- Center for Microscopy and Imaging, Baylor University , Waco, Texas
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85
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Tóth SZ, Lőrincz T, Szarka A. Concentration Does Matter: The Beneficial and Potentially Harmful Effects of Ascorbate in Humans and Plants. Antioxid Redox Signal 2018; 29:1516-1533. [PMID: 28974112 DOI: 10.1089/ars.2017.7125] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
SIGNIFICANCE Ascorbate (Asc) is an essential compound both in animals and plants, mostly due to its reducing properties, thereby playing a role in scavenging reactive oxygen species (ROS) and acting as a cofactor in various enzymatic reactions. Recent Advances: Growing number of evidence shows that excessive Asc accumulation may have negative effects on cellular functions both in humans and plants; inter alia it may negatively affect signaling mechanisms, cellular redox status, and contribute to the production of ROS via the Fenton reaction. CRITICAL ISSUES Both plants and humans tightly control cellular Asc levels, possibly via biosynthesis, transport, and degradation, to maintain them in an optimum concentration range, which, among other factors, is essential to minimize the potentially harmful effects of Asc. On the contrary, the Fenton reaction induced by a high-dose Asc treatment in humans enables a potential cancer-selective cell death pathway. FUTURE DIRECTIONS The elucidation of Asc induced cancer selective cell death mechanisms may give us a tool to apply Asc in cancer therapy. On the contrary, the regulatory mechanisms controlling cellular Asc levels are also to be considered, for example, when aiming at generating crops with elevated Asc levels.
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Affiliation(s)
- Szilvia Z Tóth
- 1 Institute of Plant Biology , Biological Research Centre of the Hungarian Academy of Sciences, Szeged, Hungary
| | - Tamás Lőrincz
- 2 Laboratory of Biochemistry and Molecular Biology, Department of Applied Biotechnology and Food Science, Budapest University of Technology and Economics , Budapest, Hungary
| | - András Szarka
- 2 Laboratory of Biochemistry and Molecular Biology, Department of Applied Biotechnology and Food Science, Budapest University of Technology and Economics , Budapest, Hungary
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The Synthesis of Ascorbic Acid in Rice Roots Plays an Important Role in the Salt Tolerance of Rice by Scavenging ROS. Int J Mol Sci 2018; 19:ijms19113347. [PMID: 30373162 PMCID: PMC6275051 DOI: 10.3390/ijms19113347] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2018] [Revised: 10/10/2018] [Accepted: 10/17/2018] [Indexed: 11/30/2022] Open
Abstract
The root plays an important role in the responses of plants to stresses, but the detailed mechanisms of roots in stress responses are still obscure. The GDP-mannose pyrophosphate synthetase (GMPase) OsVTC1-3 is a key factor of ascorbic acid (AsA) synthesis in rice roots. The present study showed that the transcript of OsVTC1-3 was induced by salt stress in roots, but not in leaves. Inhibiting the expression of OsVTC1-3 by RNA interfering (RI) technology significantly impaired the tolerance of rice to salt stress. The roots of OsVTC1-3 RI plants rapidly produced more O2−, and later accumulated amounts of H2O2 under salt stress, indicating the impaired tolerance of OsVTC1-3 RI plants to salt stress due to the decreasing ability of scavenging reactive oxygen species (ROS). Moreover, exogenous AsA restored the salt tolerance of OsVTC1-3 RI plants, indicating that the AsA synthesis in rice roots is an important factor for the response of rice to salt stress. Further studies showed that the salt-induced AsA synthesis was limited in the roots of OsVTC1-3 RI plants. The above results showed that specifically regulating AsA synthesis to scavenge ROS in rice roots was one of important factors in enhancing the tolerance of rice to salt stress.
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Zhou HX, Milne RI, Ma XL, Song YQ, Fang JY, Sun H, Zha HG. Characterization of a L-Gulono-1,4-Lactone Oxidase Like Protein in the Floral Nectar of Mucuna sempervirens, Fabaceae. FRONTIERS IN PLANT SCIENCE 2018; 9:1109. [PMID: 30105046 PMCID: PMC6077269 DOI: 10.3389/fpls.2018.01109] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Accepted: 07/10/2018] [Indexed: 06/08/2023]
Abstract
Floral nectar plays important roles in the interaction between animal-pollinated plants and pollinators. Its components include water, sugars, amino acids, vitamins, and proteins. Growing empirical evidence shows that most of the proteins secreted in nectar (nectarines) are enzymes that can tailor nectar chemistry for their animal mutualists or reduce the growth of microorganisms in nectar. However, to date, the function of many nectarines remains unknown, and very few plant species have had their nectar proteome thoroughly investigated. Mucuna sempervirens (Fabaceae) is a perennial woody vine native to China. Nectarines from this species were separated using two-dimensional gel electrophoresis, and analyzed using mass spectrometry. A L-gulonolactone oxidase like protein (MsGulLO) was detected, and the full length cDNA was cloned: it codes for a protein of 573 amino acids with a predicted signal peptide. MsGulLO has high similarity to L-gulonolactone oxidase 5 (AtGulLO5) in Arabidopsis thaliana, which was suggested to be involved in the pathway of ascorbate biosynthesis; however, both MsGulLO and AtGulLO5 are divergent from animal L-gulonolactone oxidases. MsGulLO was expressed mainly in flowers, and especially in nectary before blooming. However, cloning and gene expression analysis showed that L-galactonolactone dehydrogenase (MsGLDH), a vital enzyme in plant ascorbate biosynthesis, was expressed in all of flowers, roots, stems, and especially leaves. MsGulLO was purified to near homogeneity from raw MS nectar by gel filtration chromatography. The enzyme was determined to be a neutral monomeric protein with an apparent molecular mass of 70 kDa. MsGulLO is not a flavin-containing protein, and has neither L-galactonolactone dehydrogenase activity, nor the L-gulonolactone activity that is usual in animal GulLOs. However, it has weak oxidase activity with the following substrates: L-gulono-1,4-lactone, L -galactono-1,4-lactone, D-gluconic acid-δ-lactone, glucose, and fructose. MsGulLO is suggested to function in hydrogen peroxide generation in nectar but not in plant ascorbate biosynthesis.
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Affiliation(s)
- Hong-Xia Zhou
- College of Life and Environment Sciences, Huangshan University, Huangshan, China
| | - Richard I. Milne
- Institute of Molecular Plant Sciences, University of Edinburgh, Edinburgh, United Kingdom
| | - Xue-Long Ma
- College of Life and Environment Sciences, Huangshan University, Huangshan, China
| | - Yue-Qin Song
- College of Life and Environment Sciences, Huangshan University, Huangshan, China
| | - Jian-Yu Fang
- College of Life and Environment Sciences, Huangshan University, Huangshan, China
| | - Hang Sun
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
| | - Hong-Guang Zha
- College of Life and Environment Sciences, Huangshan University, Huangshan, China
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Smirnoff N. Ascorbic acid metabolism and functions: A comparison of plants and mammals. Free Radic Biol Med 2018; 122:116-129. [PMID: 29567393 PMCID: PMC6191929 DOI: 10.1016/j.freeradbiomed.2018.03.033] [Citation(s) in RCA: 302] [Impact Index Per Article: 50.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/17/2017] [Revised: 03/15/2018] [Accepted: 03/17/2018] [Indexed: 02/07/2023]
Abstract
Ascorbic acid is synthesised by eukaryotes, the known exceptions being primates and some other animal groups which have lost functional gulonolactone oxidase. Prokaryotes do not synthesise ascorbate and do not need an ascorbate supply, so the functions that are essential for mammals and plants are not required or are substituted by other compounds. The ability of ascorbate to donate electrons enables it to act as a free radical scavenger and to reduce higher oxidation states of iron to Fe2+. These reactions are the basis of its biological activity along with the relative stability of the resulting resonance stabilised monodehydroascorbate radical. The importance of these properties is emphasised by the evolution of at least three biosynthetic pathways and production of an ascorbate analogue, erythroascorbate, by fungi. The iron reducing activity of ascorbate maintains the reactive centre Fe2+ of 2-oxoglutarate-dependent dioxygenases (2-ODDs) thus preventing inactivation. These enzymes have diverse functions and, recently, the possibility that ascorbate status in mammals could influence 2-ODDs involved in histone and DNA demethylation thereby influencing stem cell differentiation and cancer has been uncovered. Ascorbate is involved in iron uptake and transport in plants and animals. While the above biochemical functions are shared between mammals and plants, ascorbate peroxidase (APX) is an enzyme family limited to plants and photosynthetic protists. It provides these organisms with increased capacity to remove H2O2 produced by photosynthetic electron transport and photorespiration. The Fe reducing activity of ascorbate enables hydroxyl radical production (pro-oxidant effect) and the reactivity of dehydroascorbate (DHA) and reaction of its degradation products with proteins (dehydroascorbylation and glycation) is potentially damaging. Ascorbate status influences gene expression in plants and mammals but at present there is little evidence that it acts as a specific signalling molecule. It most likely acts indirectly by influencing the redox state of thiols and 2-ODD activity. However, the possibility that dehydroascorbylation is a regulatory post-translational protein modification could be explored.
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Affiliation(s)
- Nicholas Smirnoff
- Biosciences, College of Life and Environmental Sciences, University of Exeter, Geoffrey Pope Building, Stocker Road, Exeter EX4 4QD, UK.
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Li Y, Chu Z, Luo J, Zhou Y, Cai Y, Lu Y, Xia J, Kuang H, Ye Z, Ouyang B. The C2H2 zinc-finger protein SlZF3 regulates AsA synthesis and salt tolerance by interacting with CSN5B. PLANT BIOTECHNOLOGY JOURNAL 2018; 16:1201-1213. [PMID: 29193661 PMCID: PMC5978872 DOI: 10.1111/pbi.12863] [Citation(s) in RCA: 63] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2017] [Revised: 11/07/2017] [Accepted: 11/12/2017] [Indexed: 05/19/2023]
Abstract
Abiotic stresses are a major cause of crop loss. Ascorbic acid (AsA) promotes stress tolerance by scavenging reactive oxygen species (ROS), which accumulate when plants experience abiotic stress. Although the biosynthesis and metabolism of AsA are well established, the genes that regulate these pathways remain largely unexplored. Here, we report on a novel regulatory gene from tomato (Solanum lycopersicum) named SlZF3 that encodes a Cys2/His2-type zinc-finger protein with an EAR repression domain. The expression of SlZF3 was rapidly induced by NaCl treatments. The overexpression of SlZF3 significantly increased the levels of AsA in tomato and Arabidopsis. Consequently, the AsA-mediated ROS-scavenging capacity of the SlZF3-overexpressing plants was increased, which enhanced the salt tolerance of these plants. Protein-protein interaction assays demonstrated that SlZF3 directly binds CSN5B, a key component of the COP9 signalosome. This interaction inhibited the binding of CSN5B to VTC1, a GDP-mannose pyrophosphorylase that contributes to AsA biosynthesis. We found that the EAR domain promoted the stability of SlZF3 but was not required for the interaction between SlZF3 and CSN5B. Our findings indicate that SlZF3 simultaneously promotes the accumulation of AsA and enhances plant salt-stress tolerance.
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Affiliation(s)
- Ying Li
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Zhuannan Chu
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Jinying Luo
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Yuhong Zhou
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Yujing Cai
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Yongen Lu
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Junhui Xia
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Hanhui Kuang
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Zhibiao Ye
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
| | - Bo Ouyang
- Key Laboratory of Horticultural Plant Biology, MOE, and Key Laboratory of Horticultural Crop Biology and Genetic improvement (Central Region), MOAHuazhong Agricultural UniversityWuhanHubeiChina
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90
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Manganaris GA, Goulas V, Mellidou I, Drogoudi P. Antioxidant Phytochemicals in Fresh Produce: Exploitation of Genotype Variation and Advancements in Analytical Protocols. Front Chem 2018; 5:95. [PMID: 29468146 PMCID: PMC5807909 DOI: 10.3389/fchem.2017.00095] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2017] [Accepted: 10/24/2017] [Indexed: 01/27/2023] Open
Abstract
Horticultural commodities (fruit and vegetables) are the major dietary source of several bioactive compounds of high nutraceutical value for humans, including polyphenols, carotenoids and vitamins. The aim of the current review was dual. Firstly, toward the eventual enhancement of horticultural crops with bio-functional compounds, the natural genetic variation in antioxidants found in different species and cultivars/genotypes is underlined. Notably, some landraces and/or traditional cultivars have been characterized by substantially higher phytochemical content, i.e., small tomato of Santorini island (cv. "Tomataki Santorinis") possesses appreciably high amounts of ascorbic acid (AsA). The systematic screening of key bioactive compounds in a wide range of germplasm for the identification of promising genotypes and the restoration of key gene fractions from wild species and landraces may help in reducing the loss of agro-biodiversity, creating a healthier "gene pool" as the basis of future adaptation. Toward this direction, large scale comparative studies in different cultivars/genotypes of a given species provide useful insights about the ones of higher nutritional value. Secondly, the advancements in the employment of analytical techniques to determine the antioxidant potential through a convenient, easy and fast way are outlined. Such analytical techniques include electron paramagnetic resonance (EPR) and infrared (IR) spectroscopy, electrochemical, and chemometric methods, flow injection analysis (FIA), optical sensors, and high resolution screening (HRS). Taking into consideration that fruits and vegetables are complex mixtures of water- and lipid-soluble antioxidants, the exploitation of chemometrics to develop "omics" platforms (i.e., metabolomics, foodomics) is a promising tool for researchers to decode and/or predict antioxidant activity of fresh produce. For industry, the use of optical sensors and IR spectroscopy is recommended to estimate the antioxidant activity rapidly and at low cost, although legislation does not allow its correlation with health claims.
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Affiliation(s)
- George A. Manganaris
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Lemesos, Cyprus
| | - Vlasios Goulas
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Lemesos, Cyprus
| | - Ifigeneia Mellidou
- Hellenic Agricultural Organization ‘Demeter’, Institute of Plant Breeding and Genetic Resources, Thessaloniki, Greece
| | - Pavlina Drogoudi
- Hellenic Agricultural Organization ‘Demeter’, Department of Deciduous Fruit Trees, Institute of Plant Breeding and Genetic Resources, Naoussa, Greece
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91
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Rigano MM, Lionetti V, Raiola A, Bellincampi D, Barone A. Pectic enzymes as potential enhancers of ascorbic acid production through the D-galacturonate pathway in Solanaceae. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2018; 266:55-63. [PMID: 29241567 DOI: 10.1016/j.plantsci.2017.10.013] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Revised: 10/19/2017] [Accepted: 10/23/2017] [Indexed: 05/24/2023]
Abstract
The increase of L-Ascorbic Acid (AsA) content in tomato (Solanum lycopersicum) is a common goal in breeding programs due to its beneficial effect on human health. To shed light into the regulation of fruit AsA content, we exploited a Solanum pennellii introgression line (IL12-4-SL) harbouring one quantitative trait locus that increases the content of total AsA in the fruit. Biochemical and transcriptomic analyses were carried out in fruits of IL12-4-SL in comparison with the cultivated line M82 at different stages of ripening. AsA content was studied in relation with pectin methylesterase (PME) activity and the degree of pectin methylesterification (DME). Our results indicated that the increase of AsA content in IL12-4-SL fruits was related with pectin de-methylesterification/degradation. Specific PME, polygalacturonase (PG) and UDP-D-glucuronic-acid-4-epimerase (UGlcAE) isoforms were proposed as components of the D-galacturonate pathway leading to AsA biosynthesis. The relationship between AsA content and PME activity was also exploited in PMEI tobacco plants expressing a specific PME inhibitor (PMEI). Here we report that tobacco PMEI plants, altered in PME activity and degree of pectin methylesterification, showed a reduction in low methylesterified pectic domains and exhibited a reduced AsA content. Overall, our results provide novel biochemical and genetic traits for increasing antioxidant content by marker-assisted selection in the Solanaceae family.
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Affiliation(s)
- Maria Manuela Rigano
- Department of Agricultural Sciences, University of Naples "Federico II", Via Università 100, 80055 Portici, Italy
| | - Vincenzo Lionetti
- Department of Biology and Biotechnologies "Charles Darwin", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy
| | - Assunta Raiola
- Department of Agricultural Sciences, University of Naples "Federico II", Via Università 100, 80055 Portici, Italy
| | - Daniela Bellincampi
- Department of Biology and Biotechnologies "Charles Darwin", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy.
| | - Amalia Barone
- Department of Agricultural Sciences, University of Naples "Federico II", Via Università 100, 80055 Portici, Italy.
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92
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Tao J, Wu H, Li Z, Huang C, Xu X. Molecular Evolution of GDP-D-Mannose Epimerase ( GME), a Key Gene in Plant Ascorbic Acid Biosynthesis. FRONTIERS IN PLANT SCIENCE 2018; 9:1293. [PMID: 30233629 PMCID: PMC6132023 DOI: 10.3389/fpls.2018.01293] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2018] [Accepted: 08/17/2018] [Indexed: 05/04/2023]
Abstract
The widespread ascorbic acid (AsA) plays a vital role in plant development and abiotic stress tolerance, but AsA concentration varies greatly among different plants. GDP-D-mannose epimerase (GME), which catalyzes GDP-D-mannose to GDP-L-galactose or GDP-L-gulose, is a key enzyme in plant AsA biosynthesis pathway. Functions and expression patterns of GME have been well studied in previous works, however, little information is known about the evolutionary patterns of the gene. In this study, GME gene structure, corresponding conserved protein motifs and evolutionary relationships were systematically analyzed. A total of 111 GME gene sequences were retrieved from 59 plant genomes, which representing almost all the major lineages of Viridiplantae: dicotyledons, monocotyledons, gymnosperms, pteridophytes, bryophytes, and chlorophytes. Results showed that homologs of GME were widely present in Viridiplantae. GME gene structures were conservative in higher plants, while varied greatly in the basal subgroups of the phylogeny including lycophytes, bryophytes, and chlorophytes, suggesting GME gene structure might have undergone severe differentiation at lower plant and then gradually fixed as plant evolution. The basic motifs of GME were strongly conserved throughout Viridiplantae, suggesting the conserved function of the protein. Molecular evolution analysis showed that strong purifying selection was the predominant force in the evolution of GME. A few branches and sites under episodic diversifying selection were identified and most of the branches located in the subgroup of chlorphytes, indicating episodic diversifying selection at a few branches and sites may play a role in the evolution of GME and diversifying selection may have occurred at the early stage of Viridiplantae. Our results provide novel insights into functional conservation and the evolution of GME.
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Affiliation(s)
- Junjie Tao
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
| | - Han Wu
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
| | - Zhangyun Li
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
| | - Chunhui Huang
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
| | - Xiaobiao Xu
- College of Agronomy, Jiangxi Agricultural University, Nanchang, China
- Institute of Kiwifruit, Jiangxi Agricultural University, Nanchang, China
- *Correspondence: Xiaobiao Xu,
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93
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Loix C, Huybrechts M, Vangronsveld J, Gielen M, Keunen E, Cuypers A. Reciprocal Interactions between Cadmium-Induced Cell Wall Responses and Oxidative Stress in Plants. FRONTIERS IN PLANT SCIENCE 2017; 8:1867. [PMID: 29163592 PMCID: PMC5671638 DOI: 10.3389/fpls.2017.01867] [Citation(s) in RCA: 148] [Impact Index Per Article: 21.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2017] [Accepted: 10/12/2017] [Indexed: 05/18/2023]
Abstract
Cadmium (Cd) pollution renders many soils across the world unsuited or unsafe for food- or feed-orientated agriculture. The main mechanism of Cd phytotoxicity is the induction of oxidative stress, amongst others through the depletion of glutathione. Oxidative stress can damage lipids, proteins, and nucleic acids, leading to growth inhibition or even cell death. The plant cell has a variety of tools to defend itself against Cd stress. First and foremost, cell walls might prevent Cd from entering and damaging the protoplast. Both the primary and secondary cell wall have an array of defensive mechanisms that can be adapted to cope with Cd. Pectin, which contains most of the negative charges within the primary cell wall, can sequester Cd very effectively. In the secondary cell wall, lignification can serve to immobilize Cd and create a tougher barrier for entry. Changes in cell wall composition are, however, dependent on nutrients and conversely might affect their uptake. Additionally, the role of ascorbate (AsA) as most important apoplastic antioxidant is of considerable interest, due to the fact that oxidative stress is a major mechanism underlying Cd toxicity, and that AsA biosynthesis shares several links with cell wall construction. In this review, modifications of the plant cell wall in response to Cd exposure are discussed. Focus lies on pectin in the primary cell wall, lignification in the secondary cell wall and the importance of AsA in the apoplast. Regarding lignification, we attempt to answer the question whether increased lignification is merely a consequence of Cd toxicity, or rather an elicited defense response. We propose a model for lignification as defense response, with a central role for hydrogen peroxide as substrate and signaling molecule.
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Affiliation(s)
| | | | | | | | | | - Ann Cuypers
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium
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94
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Brendolise C, Espley RV, Lin-Wang K, Laing W, Peng Y, McGhie T, Dejnoprat S, Tomes S, Hellens RP, Allan AC. Multiple Copies of a Simple MYB-Binding Site Confers Trans-regulation by Specific Flavonoid-Related R2R3 MYBs in Diverse Species. FRONTIERS IN PLANT SCIENCE 2017; 8:1864. [PMID: 29163590 PMCID: PMC5671642 DOI: 10.3389/fpls.2017.01864] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 10/12/2017] [Indexed: 05/18/2023]
Abstract
In apple, the MYB transcription factor MYB10 controls the accumulation of anthocyanins. MYB10 is able to auto-activate its expression by binding its own promoter at a specific motif, the R1 motif. In some apple accessions a natural mutation, termed R6, has more copies of this motif within the MYB10 promoter resulting in stronger auto-activation and elevated anthocyanins. Here we show that other anthocyanin-related MYBs selected from apple, pear, strawberry, petunia, kiwifruit and Arabidopsis are able to activate promoters containing the R6 motif. To examine the specificity of this motif, members of the R2R3 MYB family were screened against a promoter harboring the R6 mutation. Only MYBs from subgroups 5 and 6 activate expression by binding the R6 motif, with these MYBs sharing conserved residues in their R2R3 DNA binding domains. Insertion of the apple R6 motif into orthologous promoters of MYB10 in pear (PcMYB10) and Arabidopsis (AtMY75) elevated anthocyanin levels. Introduction of the R6 motif into the promoter region of an anthocyanin biosynthetic enzyme F3'5'H of kiwifruit imparts regulation by MYB10. This results in elevated levels of delphinidin in both tobacco and kiwifruit. Finally, an R6 motif inserted into the promoter the vitamin C biosynthesis gene GDP-L-Gal phosphorylase increases vitamin C content in a MYB10-dependent manner. This motif therefore provides a tool to re-engineer novel MYB-regulated responses in plants.
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Affiliation(s)
- Cyril Brendolise
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
| | - Richard V. Espley
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
| | - Kui Lin-Wang
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
| | - William Laing
- Fitzherbert Science Centre, Plant and Food Research, Palmerston North, New Zealand
| | - Yongyan Peng
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
| | - Tony McGhie
- Fitzherbert Science Centre, Plant and Food Research, Palmerston North, New Zealand
| | - Supinya Dejnoprat
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
| | - Sumathi Tomes
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
| | - Roger P. Hellens
- Centre for Tropical Crops and Biocommodities, Queensland University of Technology, Brisbane, QLD, Australia
| | - Andrew C. Allan
- Mt Albert Research Centre, Plant and Food Research, Auckland, New Zealand
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
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95
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Mellidou I, Kanellis AK. Genetic Control of Ascorbic Acid Biosynthesis and Recycling in Horticultural Crops. Front Chem 2017; 5:50. [PMID: 28744455 PMCID: PMC5504230 DOI: 10.3389/fchem.2017.00050] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2017] [Accepted: 06/27/2017] [Indexed: 12/20/2022] Open
Abstract
Ascorbic acid (AsA) is an essential compound present in almost all living organisms that has important functions in several aspects of plant growth and development, hormone signaling, as well as stress defense networks. In recent years, the genetic regulation of AsA metabolic pathways has received much attention due to its beneficial role in human diet. Despite the great variability within species, genotypes, tissues and developmental stages, AsA accumulation is considered to be controlled by the fine orchestration of net biosynthesis, recycling, degradation/oxidation, and/or intercellular and intracellular transport. To date, several structural genes from the AsA metabolic pathways and transcription factors are considered to significantly affect AsA in plant tissues, either at the level of activity, transcription or translation via feedback inhibition. Yet, all the emerging studies support the notion that the steps proceeding through GDP-L-galactose phosphorylase and to a lesser extent through GDP-D-mannose-3,5-epimerase are control points in governing AsA pool size in several species. In this mini review, we discuss the current consensus of the genetic regulation of AsA biosynthesis and recycling, with a focus on horticultural crops. The aspects of AsA degradation and transport are not discussed herein. Novel insights of how this multifaceted trait is regulated are critical to prioritize candidate genes for follow-up studies toward improving the nutritional value of fruits and vegetables.
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Affiliation(s)
- Ifigeneia Mellidou
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of ThessalonikiThessaloniki, Greece.,Laboratory of Agricultural Chemistry, Department of Crop Science, School of Agriculture, Aristotle University of ThessalonikiThessaloniki, Greece
| | - Angelos K Kanellis
- Group of Biotechnology of Pharmaceutical Plants, Laboratory of Pharmacognosy, Department of Pharmaceutical Sciences, Aristotle University of ThessalonikiThessaloniki, Greece
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96
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Vidal-Meireles A, Neupert J, Zsigmond L, Rosado-Souza L, Kovács L, Nagy V, Galambos A, Fernie AR, Bock R, Tóth SZ. Regulation of ascorbate biosynthesis in green algae has evolved to enable rapid stress-induced response via the VTC2 gene encoding GDP-l-galactose phosphorylase. THE NEW PHYTOLOGIST 2017; 214:668-681. [PMID: 28112386 DOI: 10.1111/nph.14425] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2016] [Accepted: 12/04/2016] [Indexed: 05/22/2023]
Abstract
Ascorbate (vitamin C) plays essential roles in stress resistance, development, signaling, hormone biosynthesis and regulation of gene expression; however, little is known about its biosynthesis in algae. In order to provide experimental proof for the operation of the Smirnoff-Wheeler pathway described for higher plants and to gain more information on the regulation of ascorbate biosynthesis in Chlamydomonas reinhardtii, we targeted the VTC2 gene encoding GDP-l-galactose phosphorylase using artificial microRNAs. Ascorbate concentrations in VTC2 amiRNA lines were reduced to 10% showing that GDP-l-galactose phosphorylase plays a pivotal role in ascorbate biosynthesis. The VTC2 amiRNA lines also grow more slowly, have lower chlorophyll content, and are more susceptible to stress than the control strains. We also demonstrate that: expression of the VTC2 gene is rapidly induced by H2 O2 and 1 O2 resulting in a manifold increase in ascorbate content; in contrast to plants, there is no circadian regulation of ascorbate biosynthesis; photosynthesis is not required per se for ascorbate biosynthesis; and Chlamydomonas VTC2 lacks negative feedback regulation by ascorbate in the physiological concentration range. Our work demonstrates that ascorbate biosynthesis is also highly regulated in Chlamydomonas albeit via mechanisms distinct from those previously described in land plants.
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Affiliation(s)
- André Vidal-Meireles
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Szeged, Hungary
| | - Juliane Neupert
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany
| | - Laura Zsigmond
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Szeged, Hungary
| | - Laise Rosado-Souza
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany
| | - László Kovács
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Szeged, Hungary
| | - Valéria Nagy
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Szeged, Hungary
| | - Anikó Galambos
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Szeged, Hungary
| | - Alisdair R Fernie
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany
| | - Ralph Bock
- Max-Planck-Institut für Molekulare Pflanzenphysiologie, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany
| | - Szilvia Z Tóth
- Institute of Plant Biology, Biological Research Centre of the Hungarian Academy of Sciences, Temesvári krt. 62, H-6726, Szeged, Hungary
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97
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Macknight RC, Laing WA, Bulley SM, Broad RC, Johnson AA, Hellens RP. Increasing ascorbate levels in crops to enhance human nutrition and plant abiotic stress tolerance. Curr Opin Biotechnol 2017; 44:153-160. [PMID: 28231513 DOI: 10.1016/j.copbio.2017.01.011] [Citation(s) in RCA: 53] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2016] [Revised: 01/29/2017] [Accepted: 01/30/2017] [Indexed: 12/20/2022]
Abstract
Ascorbate (or vitamin C) is an essential human micronutrient predominantly obtained from plants. In addition to preventing scurvy, it is now known to have broader roles in human health, for example as a cofactor for enzymes involved in epigenetic programming and as regulator of cellular iron uptake. Furthermore, ascorbate is the major antioxidant in plants and underpins many environmentally induced abiotic stress responses. Biotechnological approaches to enhance the ascorbate content of crops therefore have potential to improve both human health and abiotic stress tolerance of crops. Identifying the genetic basis of ascorbate variation between plant varieties and discovering how some 'super fruits' accumulate extremely high levels of ascorbate should reveal new ways to more effectively manipulate the production of ascorbate in crops.
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Affiliation(s)
- Richard C Macknight
- University of Otago, Department of Biochemistry, PO Box 56, Dunedin 9054, New Zealand; Queensland University of Technology, Centre for Tropical Crops and Biocommodities, Institute for Future Environments, GPO Box 2434, Brisbane, QLD 4001, Australia.
| | - William A Laing
- The New Zealand Institute for Plant & Food Research Limited, Food Industry Science Centre, Bachelor Road, Palmerston North 4474, New Zealand
| | - Sean M Bulley
- The New Zealand Institute for Plant & Food Research Limited, 412 No 1 Road, RD 2, Te Puke 3182, New Zealand
| | - Ronan C Broad
- The University of Melbourne, School of BioSciences, Parkville, Melbourne, 3010 VIC, Australia
| | - Alexander At Johnson
- The University of Melbourne, School of BioSciences, Parkville, Melbourne, 3010 VIC, Australia
| | - Roger P Hellens
- Queensland University of Technology, Centre for Tropical Crops and Biocommodities, Institute for Future Environments, GPO Box 2434, Brisbane, QLD 4001, Australia
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