Role of psychrotrophic fungal strains in accelerating and enhancing the maturity of pig manure composting under low-temperature conditions

Effects of different proportions of fruit tree branches on nicotine content and microbial diversity during composting of tobacco waste

Adding fruit tree branches to the compost pile in appropriate proportions is one of the methods used to address the challenge of tobacco waste recycling. However, the effects of different proportions of fruit tree branches on nicotine concentration and microbial diversity during tobacco waste composting have not been reported. In this study, a composting system with tobacco waste, cow dung, and fruit tree branches was established in a laboratory fermenter to assess the impact of adding 10%, 20%, and 30% fruit tree branches on quantity changes. In addition, the relationships between nicotine degradation, compost properties, enzyme activities, and microbial diversities were determined using biochemical assay methods and high-throughput sequencing. The results showed that adding appropriate proportions of fruit branch segments affected changes in physical and chemical properties during composting and promoted tobacco waste compost maturity. Aerobic composting effectively degraded nicotine in tobacco waste. Increased proportions of fruit branch segments led to elevations in nicotine degradation rates and enzyme activities related to lignocellulose degradation. The addition of fruit branches influenced the relative abundance and species of dominant bacteria and fungi at the phylum and genus levels. However, it did not significantly affect the relative abundance of the main bacterial genera involved in nicotine degradation. Nevertheless, it reduced the sensitivity of enzyme activity to nicotine content within heaps, increasing reliance on total nitrogen changes. The results of this study provide a theoretical basis for the utilization of tobacco waste in composting systems and indicate that fruit tree branches can enhance nicotine degradation efficiency during tobacco waste composting.

Co-composting of dewatered sludge and wheat straw with newly isolated Xenophilus azovorans: Carbon dynamics, humification, and driving pathways

Composting is a biological reaction caused by microorganisms. Composting efficiency can be adequately increased by adding biochar and/or by inoculating with exogenous microorganisms. In this study, we looked at four methods for dewatered sludge waste (DSW) and wheat straw (WS) aerobic co-composting: T1 (no additive), T2 (5% biochar), T3 (5% of a newly isolated strain, Xenophilus azovorans (XPA)), and T4 (5% of biochar-immobilized XPA (BCI-XPA)). Throughout the course of the 42-day composting period, we looked into the carbon dynamics, humification, microbial community succession, and modifications to the driving pathways. Compared to T1 and T2, the addition of XPA (T3) and BCI-XPA (T4) extended the thermophilic phase of composting without negatively affecting compost maturation. Notably, T4 exhibited a higher seed germination index (132.14%). Different from T1 and T2 treatments, T3 and T4 treatments increased CO2 and CH4 emissions in the composting process, in which the cumulative CO2 emissions increased by 18.61-47.16%, and T3 and T4 treatments also promoted the formation of humic acid. Moreover, T4 treatment with BCI-XPA addition showed relatively higher activities of urease, polyphenol oxidase, and laccase, as well as a higher diversity of microorganisms compared to other processes. The Functional Annotation of Prokaryotic Taxa (FAPROTAX) analysis showed that microorganisms involved in the carbon cycle dominated the entire composting process in all treatments, with chemoheterotrophy and aerobic chemoheterotrophy being the main pathways of organic materials degradation. Moreover, the presence of XPA accelerated the breakdown of organic materials by catabolism of aromatic compounds and intracellular parasite pathways. On the other hand, the xylanolysis pathway was aided in the conversion of organic materials to dissolved organics by the addition of BCI-XPA. These findings indicate that XPA and BCI-XPA have potential as additives to improve the efficiency of dewatered sludge and wheat straw co-composting.

Enhancing boreal forest resilience: A four-year impact of biochar on soil quality and fungal communities

Boreal forests commonly suffer from nutrient deficiency due to restricted biological activity and decomposition. Biochar has been used as a promising strategy to improve soil quality, yet its impacts on forest soil microbes, particularly in cold environment, remains poorly understood. In this study, we investigated the effects of biochar, produced at different pyrolysis temperatures (500 °C and 650 °C) and applied at different amounts (0.5 kg·m-2 and 1.0 kg·m-2), on soil property, soil enzyme activity, and fungal community dynamics in a boreal forest over a span of two to four years. Our results showed that, four-year post-application of biochar produced at 650 °C and applied at 1.0 kg·m-2, significantly increased the relative abundance of Mortierellomycota and enhanced fungal species richness, α-diversity and evenness compared to the control (CK) (P < 0.05). Notably, the abundance of Phialocephala fortinii increased with the application of biochar produced at 500 °C and applied at 0.5 kg·m-2, exhibiting a positively correlation with the carbon cycling-related enzyme β-cellobiosidase. Functionally, distinct fungal gene structures were formed between different biochar pyrolysis temperatures, and between application amounts in four-year post-biochar application (P < 0.05). Additionally, correlation analyses revealed the significance of the duration post-biochar application on the soil properties, soil extracellular enzymes, soil fungal dominant phyla, fungal community and gene structures (P < 0.01). The interaction between biochar pyrolysis temperature and application amount significantly influenced fungal α-diversity (P < 0.01). Overall, these findings provide theoretical insights and practical application for biochar as soil amendment in boreal forest ecosystems.

Response of phosphorus fractions transformation and microbial community to carbon-to-phosphorus ratios during sludge composting

Phosphorus (P) is one of the essential nutrient elements for plant growth and development. Sludge compost products can be used as an important source of soil P to solve the shortage of soil P. The difference in the initial carbon-to-phosphorus ratio (C/P) will lead to difference in the bacterial community, which would affect the biological pathway of P conversion in composting. However, few studies have been reported on adjusting the initial C/P of composting to explore P conversion. Therefore, this study investigated the response of P component transformations, bacterial community and P availability to C/P during sludge composting by adjusting initial C/P. The results showed that increasing C/P promoted the mineralization of organic P and significantly increased the content of the labile P. High C/P also increased the relative content of available P, especially when the C/P was at 45 and 60, it reached 60.51% and 60.47%. High C/P caused differences in the community structure, and improved the binding ability of microbial network modules and the competitiveness of microbial communities. Additionally, high C/P strengthened the effect of microbial communities on the transformation of P components. Finally, the study showed that C/P was the main contributor to P content variation (64.7%) and indirectly affected P component conversion by affecting the microbial community. Therefore, adjusting the C/P is crucial to improve the P utilization rate of composting products.

Effect of nitrogen retention composite additives Ca(H2PO4)2 and MgSO4 on the degradation of lignocellulose, compost maturation, and fungal communities in compost

This study investigated the effects of the nitrogen retention composite additives Ca(H2PO4)2 and MgSO4 on lignocellulose degradation, maturation, and fungal communities in composts. The study included control (C, without Ca(H2PO4)2 and MgSO4), 1% Ca(H2PO4)2 + 2% MgSO4 (CaPM1), 1.5% Ca(H2PO4)2 + 3% MgSO4 (CaPM2). The results showed that Ca(H2PO4)2 and MgSO4 enhanced the degradation of total organic carbon (TOC) and promoted the degradation of lignocellulose in compost, with CaPM2 showing the highest TOC and lignocellulose degradation. Changes in the three-dimensional excitation-emission matrix fluorescence spectroscopy (3D-EEM) of dissolved organic matter (DOM) components in compost indicated that the treatment group with the addition of Ca(H2PO4)2 and MgSO4 promoted the production of humic acids (HAs) and increased the degree of compost decomposition, with CaPM2 demonstrating the highest degree of decomposition. The addition of Ca(H2PO4)2 and MgSO4 modified the composition of the fungal community. Ca(H2PO4)2 and MgSO4 increased the relative abundance of Ascomycota, decreased unclassified_Fungi, and Glomeromycota, and activated the fungal genera Thermomyces and Aspergillus, which can degrade lignin and cellulose during the thermophilic stage of composting. Ca(H2PO4)2 and MgSO4 also increased the abundance of Saprotroph, particularly undefined Saprotroph. In conclusion, the addition of Ca(H2PO4)2 and MgSO4 in composting activated fungal communities involved in lignocellulose degradation, promoted the degradation of lignocellulose, and enhanced the maturation degree of compost.

Composting municipal solid waste and animal manure in response to the current fertilizer crisis - a recent review

The dynamic price increases of fertilizers and the generation of organic waste are currently global issues. The growth of the population has led to increased production of solid municipal waste and a higher demand for food. Food production is inherently related to agriculture and, to achieve higher yields, it is necessary to replenish the soil with essential minerals. A synergistic approach that addresses both problems is the implementation of the composting process, which aligns with the principles of a circular economy. Food waste, green waste, paper waste, cardboard waste, and animal manure are promising feedstock materials for the extraction of valuable compounds. This review discusses key factors that influence the composting process and compares them with the input materials' parameters. It also considers methods for optimizing the process, such as the use of biochar and inoculation, which result in the production of the final product in a significantly shorter time and at lower financial costs. The applications of composts produced from various materials are described along with associated risks. In addition, innovative composting technologies are presented.

Influence of microbial community succession on biodegradation of municipal sludge during biodrying coupled with photocatalysis

A 20-day sludge biodrying process was coupled with photocatalysis to improve biodrying efficiency and investigate the effect of photocatalysis on biodegradation. After biodrying, the moisture content in the coupled photocatalytic group (TCA) and the control group (TUCA) decreased from 63.61% to 50.82% and 52.94%, respectively, and the volatile solids content decreased from 73.18% to 63.42% and 64.39%, respectively. Neutral proteinase activity decreased by 9.38% and 28.69%, and lipase activity decreased by 6.12% and 26.17%, respectively, indicating that photocatalysis helped maintain neutral proteinase and lipase activities. The Chao1 and Shannon indices showed that photocatalysis increased fungal diversity and reduced bacterial richness and diversity. The β diversity clustering analysis indicated that the bacterial community structure during the thermophilic phase in TCA differed from that in TUCA. The Kyoto Encyclopedia of Genes and Genomes annotation showed that photocatalysis has the potential to promote the synthesis and degradation of ketone bodies. Biodrying coupled with photocatalysis can improve the dewatering of sludge without negatively affecting biodegradation.

Soil aggregate-driven changes in nutrient redistribution and microbial communities after 10-year organic fertilization

Research studies on nutrient content and microbial communities after the application of organic manure have been reported, while available information about multi-interaction mechanisms of nutrient stoichiometry and microbial succession in soil aggregates remains limited. This work conducted a 10-year field experiment amended with cow manure (1.5 t/ha), during which the application of organic manure stimulated the fragmentation of soil macro-aggregates (>5 mm) and the agglomeration of soil micro-aggregates (<0.25 mm). Hence, the proportion of medium-size aggregates (0.25-5 mm) was increased in bulk soil, and there was an insignificant difference in the stability of soil aggregates. Meanwhile, the application of organic manure increased soil organic carbon (SOC), total nitrogen (TN) and phosphorus (TP) in all soil aggregate fractions. SOC, TN and TP were higher in micro-aggregates (<0.25 mm) after the application of organic manure, thus the dominating phylum of bacteria and fungi was more abundance in micro-aggregates due to the increase in nutrient level. During the organic fertilization process, fungal communities significantly changed because the variation of carbon-to-nitrogen ratio (C:N) in soil aggregates. Cultivated farmland in Northeast China showed a considerable capacity to sequestrate SOC during the organic fertilization process, but nitrogen may be a primary macro-element limiting soil productivity. Theoretically, organic manure amended with nitrogen fertilizer could be an effective measure to maintain microbial diversity and crop productivity in agro-ecosystems in Northeast China.

Improved carbon sequestration by utilization of ferrous ions during different organic wastes composting

The humic acid (HA) possesses a more recalcitrant structure, making it crucial carbon components that improve carbon sequestration. Moreover, ferrous ions could improve microbial activity and enhance compost humification, and their oxidation into iron oxides could adsorb carbon components for sequestration. Based on the advantages of low cost and easy availability of ferrous sulfate (FeSO4), this study investigated the effect of FeSO4 on carbon sequestration during composting. Chicken manure (CM) and food waste (FW) composting were carried out in four treatments, namely control (CM, FW) and 5% (w/w) FeSO4 treated groups (CM+, FW+). Results indicated that FeSO4 increased HA content, improved organic carbon stability. Carbon loss for CM, CM+, FW and FW + treatments were 48.5%, 46.2%, 45.0%, and 40.3%, respectively. Meanwhile, FeSO4 enhanced the function of bacterial taxa involved in HA synthesis in CM + treatment, and improved the number of core bacteria significantly associated with formation of HA and iron oxide. SEM analysis verified that role of FeSO4 was significant in promoting HA synthesis during CM + composting, while it was remarkably in enhancing HA sequestration during FW + composting. This article provided fundamental theoretical backing for enhancing HA production and improving carbon sequestration during different materials composting.

Effect of the addition of biochar and wood vinegar on the morphology of heavy metals in composts

In the experiment, the morphology of heavy metals (Pb, Cr, Cd, and Ni, HMs) was characterized using flame atomic absorption spectroscopy. In addition, Fourier transform infrared spectroscopy (FTIR) and three-dimensional excitation-emission matrix fluorescence spectroscopy (3D-EEM) were used to characterize the correlation between environmental factors and metal morphology in the rotting compost from several angles. The results showed that the humus treated with wood vinegar solution had a high degree of humification and rich aromatic structure. FTIR spectroscopy confirmed that the degree of humus aromatization gradually increased during the composting process, which enhanced the complexation of humus (HS) with HMs but had less effect on Ni. In addition, the optimum concentration of wood vinegar (WV) was determined to be 1.75%. The results of the study showed that in the Pb passivation treatment group, the proportion of soluble (Red) and exchangeable states (Exc) converted to oxidized (Oxi) and residual states (Res) was 8%, 14%, 6%, 1%, and 12% in the CK, T1, T2, T3, and T4 treatment groups, respectively; in the Cr passivation treatment group, the proportion of Cr-Red and Cr-Exc converted to oxidized and residual states was 31%, 33%, 25%, 29%, and 25%; in the Cd passivation treatment group, the proportions of Cd-Red and Cd-Exc converted to oxidized and residual states were 5%, 15%, 4%, 9%, and 11%, respectively; whereas the Ni treatment group did not show any significant passivation effect. The proportion of Pb-Oxi was relatively stable, Cr-Oxi was converted to Cr-Res, whereas Cd showed the conversion of Cd-Oxi to Cd-Exc. SUVA254 and SUVA280 showed significant positive correlations with Pb-Res, Cr-Res and Ni-Res, and significant positive correlations with moisture content (MC); whereas MC was significantly negatively correlated with each form of HMs. Total potassium (TK), total nitrogen (TN), and both carbon (TOC) were negatively correlated with Pb-Res and Pb-Exc. Structural equation modeling verified the relationship between environmental factors and HMs, and the composting results showed that the addition of biochar (BC) and a higher percentage of WV could increase compost decomposition and passivate HMs to improve its agronomic function.

Effect of the inoculation of Phanerochaete chrysosporium on nitrogen migration and organic matter conversion during electrolytic manganese residue composting

Composting has made it practicable to dispose electrolytic manganese residues (EMR) in a less toxic way, nevertheless, the decomposition and the loss of nitrogen is a critical issue. This study aimed to investigate the role of Phanerochaete chrysosporium (PC) inoculation on nitrogen migration and promotion of decomposing organic matter (OM), as well as the effect on bacterial community structure during EMR composting. The results exhibited that nitrogen loss tallied with the first-order kinetic model. PC inoculation increased the relative microbial abundance of Firmicutes, which improved the efficiency of nitrogen nitrification and OM degradation, and increased the germination index and total nitrogen content by 13.8% and 2.95 g/kg, respectively. Moreover, aromatic benzenes replaced heteropolysaccharides, alcohols and ethers as the main components of OM in fertilizer, leading up to a more stable humus structure. This study provides a rationale and a novel perspective on the resource and nutrient conservation of EMR-contaminated soils.

Influence of biochar on succession of fungal communities during food waste composting

This study aims to examine the effects of biochar on fungal dynamics during food waste composting. The different dosage of wheat straw biochar from 0 to 15% (0%, 2.5%, 5%, 7.5%, 10%, and 15%) were used as an additive to composting and examined for 42 days. The results showed that Ascomycota (94.64%) and Basidiomycota (5.36%) were the most dominant phyla. The most common fungal genera were Kluyveromyces (3.76%), Candida (5.34%), Trichoderma (2.30%), Fusarium (0.46%), Mycothermus-thermophilus (5.67%), Trametes (0.46%), and Trichosporon (3.38%). The average number of operational taxonomic units were 469, with the greatest abundance seen in the 7.5% and 10% treatments. Redundancy analysis revealed that different concentrations of biochar applied treatments have significantly distinct fungal communities. Additionally, correlation analyses of fungal interactions with environmental elements, performed through a heatmap, also indicate a distinct difference among the treatments. The study clearly demonstrates that 15% of biochar has a positive impact on fungal diversity and improves the food waste composting.

Evaluation of fungal dynamics during sheep manure composting employing peach shell biochar

In this study, explored the influence of different proportion (0%, 2.5%, 5%, 7.5%, and 10%) peach shell biochar (PSB) with microbial agents (EM) on the carbon transformation, humification process and fungal community dynamics during sheep manure (SM) composting. And no additives were used as control. The results manifested that the CO2 and CH4 emissions were effectively reduced 8.23%∼13.10% and 17.92%∼33.71%. The degradation rate of fulvic acid increased by 17.12%∼23.08% and the humic acid contents were enhanced by 27.27%∼33.97% so that accelerated the composting. Besides, the dominant fungal phylum was Ascomycota (31.43%∼52.54%), Basidiomycota (3.12%∼13.85%), Mucoromycota (0.40%∼7.61%) and Mortierellomycota (0.97%∼2.39%). Pearson correlation analysis and network indicated that there were different correlations between physicochemical indexes and fungal community under different additive concentrations. In brief, the two modifiers application promoted the SM degradation and affected the fungal community structure.

Microplastics drive microbial assembly, their interactions, and metagenomic functions in two soils with distinct pH and heavy metal availability

Microplastics (MPs) have emerged as widely existing global environmental concerns in terrestrial ecosystems. However, the mechanisms that how MPs are affecting soil microbes and their metagenomic functioning is currently uncertain. Herein, we investigated the response mechanisms of bacterial and fungal communities as well as the metagenomic functions to the addition of MPs in two soils with distinct pH and heavy metals. In this study, the acidic soil (Xintong) and the neutral soil (Huanshan) contaminated by heavy metals were incubated with Polyvinyl Chloride (PVC) MPs at ratios of 2.5% and 5% on 60 and 120 days. We aimed to evaluate the responding, assembly, and interactions of the metagenomic taxonomy and function. Results showed that only in the acidic soil, PVC MPs significantly increased soil pH and decreased CaCl₂-extractable heavy metals, and also reduced bacterial alpha diversity and interaction networks. The relative proportions of Proteobacteria and Bacteroidota in bacteria, and Mortierellomycota in fungi, were increased, but Chloroflexi and Acidobacteriota in bacteria, Ascomycota and Basidiomycota in fungi, were significantly decreased by PVC MPs. Metagenomic functions related to C cycling were repressed but the nutrient cycles were enriched with PVC MPs. In conclusion, our study suggests that the addition of PVC MPs could shift soil microbial community and metagenomic functioning, as well as increasing soil pH and reduced heavy metal availability.

The dominant role of cooperation in fungal community drives the humification process of chicken manure composting under addition of regulatory factors

This study aimed to explore the action mechanism of fungal community on the enhancement of humification during chicken manure composting by regulating the core pathway of carbon metabolism - the tricarboxylic acid cycle. Regulators adenosine triphosphate (ATP) and malonic acid were added at the beginning of composting. The analysis of changes in humification parameters showed that the humification degree and stability of compost products were improved by adding regulators. Compared with CK, the humification parameters of adding regulators group increased by 10.98% on average. Meanwhile, adding regulators not only increased key nodes, but also strengthened the positive correlation between fungi, and network relationship was closer. Moreover, core fungi associated with humification parameters were identified by constructing OTU networks, and the division and cooperation mechanism of fungi were confirmed. Ultimately, the functional role of the fungal community acting on humification was confirmed by statistical means, that was, the fungal community promoting humification was the main group of composting process. And the contribution was more obvious in ATP treatment. This study was helpful to gain insight into the mechanism of regulators addition to advance the humification process, and provided new ideas for the safe, efficient and harmless disposal of organic solid waste.

Synergetic effect and mechanism of elementary sulphur, MgSO4 and KH2PO4 progressive reinforcement on pig manure composting nitrogen retention

The potential of sulphur (S), MgSO₄ (Mg), and KH₂PO₄ (P) in nitrogen retention, ammonia emission decrease, and microbial community succession during composting needs to be investigated. To achieve this, different levels of S (0, 0.2, 0.4, 0.6, and 0.8% in dry weight) plus Mg and P (S + Mg + P) were progressively added in 70 days pig manure aerobic composting. The results revealed that the amendment increased salinity and lowered pH and dephytotoxication of the product with the increase of S amount. However, no significant inhibition effects were observed on the evolution of the thermophilic phase and product maturity. In addition, the amendment significantly reduced the total NH₃ and N₂O emissions by 29.66%-58.83% and 20.89%-56.53%, increased NH₄⁺ level by 17.31%-73.27% in thermophilic phase and NO₃^- content by 37.12%-54.84% in a mature phase, and elevated the total Kjeldahl nitrogen content by 15.49%-37.35% during the composting. In addition, compared to the control, the supplement markedly encouraged the formation of guanite in the compost product. The S addition stimulated the growth of Anseongella, Actinomadura, Chelativorans, Castellaniella, Luteimonas, and Steroidobacter microbial communities which functioned well in the degradation of nitrogen-containing compounds and organic matter. Evidence from Redundancy Analysis, Firmicutes, Myxococcus, Chloroflexi, Gemmatimonadota, and Deinococcota showed positive correlations with pH. These results imply that adding S-Mg-P amendment encourages the population and activity of specific functional microorganisms, and facilitated the ammonia emission reduction by lowering pH and thus reserved nitrogen through the formation of guanite during composting. The investigation of bacterial community abundance and environmental variables at the phylum and genus levels over time revealed that adding of 0.6% S in conjunction with P and Mg minerals was suitable for nitrogen loss mitigation in composting. The findings suggest using S + Mg + P supplement to conserve nitrogen in pig dung aerobic composting.

Exploring gaseous emissions and pivotal enzymatic activity during co-composting of branch and pig manure: the effect of particle size of bulking agents

The purpose of current study was to probe the effect of various length of branch on gaseous emissions and vital enzymatic activity. Four lengths (<2 cm, 2 cm, 5 cm, and 10 cm) of clipped branch were mingled with collected pig manure for 100 days aerobic fermentation. The consequence demonstrated that the amendment of 2 cm of branch showed conducive to decline the greenhouse gas emissions, which the CH₄ emissions decreased by 1.62-40.10%, and the N₂O emissions decreased by 21.91-34.04% contrasted with other treatments. Furthermore, the peak degree of enzymatic activities was also observed in 2 cm of branch treatment by the optimizing living condition for microbes. In view of microbiological indicators, the most abundant and complex bacterial community could be monitor in 2 cm of branch composting pile, which verified the microbial facilitation. Summing up, the strategy of 2 cm branch amendment would be recommended.

A Novel Estrone Degradation Gene Cluster and Catabolic Mechanism in Microbacterium oxydans ML-6

Global-scale estrone (E1) contamination of soil and aquatic environments results from the widespread use of animal manure as fertilizer, threatening both human health and environmental security. A detailed understanding of the degradation of E1 by microorganisms and the associated catabolic mechanism remains a key challenge for the bioremediation of E1-contaminated soil. Here, Microbacterium oxydans ML-6, isolated from estrogen-contaminated soil, was shown to efficiently degrade E1. A complete catabolic pathway for E1 was proposed via liquid chromatography-tandem mass spectrometry (LC-MS/MS), genome sequencing, transcriptomic analysis, and quantitative reverse transcription-PCR (qRT-PCR). In particular, a novel gene cluster (moc) associated with E1 catabolism was predicted. The combination of heterologous expression, gene knockout, and complementation experiments demonstrated that the 3-hydroxybenzoate 4-monooxygenase (MocA; a single-component flavoprotein monooxygenase) encoded by the mocA gene was responsible for the initial hydroxylation of E1. Furthermore, to demonstrate the detoxification of E1 by strain ML-6, phytotoxicity tests were performed. Overall, our findings provide new insight into the molecular mechanism underlying the diversity of E1 catabolism in microorganisms and suggest that M. oxydans ML-6 and its enzymes have potential applications in E1 bioremediation to reduce or eliminate E1-related environmental pollution. IMPORTANCE Steroidal estrogens (SEs) are mainly produced by animals, while bacteria are major consumers of SEs in the biosphere. However, the understanding of the gene clusters that participate in E1 degradation is still limited, and the enzymes involved in the biodegradation of E1 have not been well characterized. The present study reports that M. oxydans ML-6 has effective SE degradation capacity, which facilitates the development of strain ML-6 as a broad-spectrum biocatalyst for the production of certain desired compounds. A novel gene cluster (moc) associated with E1 catabolism was predicted. The 3-hydroxybenzoate 4-monooxygenase (MocA; a single-component flavoprotein monooxygenase) identified in the moc cluster was found to be necessary and specific for the initial hydroxylation of E1 to generate 4-OHE1, providing new insight into the biological role of flavoprotein monooxygenase.

Coupling network of hydrogen sulfide precursors and bacteria in kitchen waste composting

This study was focused on the changes of hydrogen sulfide (H₂S), its precursors, and microorganisms associated with its transformation during the composting process of kitchen waste. The results showed that the content of cysteine (Cys) and methionine (Met) decreased by 32.3 % and 57.5 % respectively, while the content of sulfate (SO₄^2-) changed little during composting. The main release period of H₂S was during the high-temperature period of composting, Cys was its main precursor. Based on network analysis, a total of 15 core genera associated with the conversion of H₂S precursors were identified, and the transformation of the H₂S precursor was mainly influenced by Filomicrobium. Temperature, pH, and TN levels had a positive effect on Filomicrobium. It could find a balance point by controlling these three factors to reduce the production of H₂S.

Phytochemical and underlying mechanism of Mikania micrantha Kunth on antibiotic resistance genes, and pathogenic microbes during chicken manure composting

Chicken manure is a source of antibiotic resistance genes (ARGs) and pathogenic microbes. Mikania micrantha Kunth (MM) is an invasive plant containing phytochemicals as antimicrobial agents. To explore its impacts on ARGs and pathogen-host interactions (PHIs), MM was added to composting mixtures. The findings indicated that compared with control (CK), MM significantly improved the phytochemical abundances, particularly stilbenoids and diarylheptanoids (4.87%), and ubiquinones (2.66%) in the treatment (T) compost. Besides, significant ARGs reduction was noted, where rpoB2, RbpA, FosB1, vatC, and vatB were removed from T compost. PHIs significantly declined in T compost, where the growth of Xanthomonas citri, Streptococcus pneumoniae, Fusarium graminearum, Vibrio cholerae, and Xanthomonas campestris were inhibited. Multiple variable analyses demonstrated that temperature and pH revealed a significant role in ARGs and PHIs decline. Accordingly, this study considerably recommends MM as a promising compost additive in terms of its antimicrobial potential toward pathogenic microbes and ARGs.

Inoculating indoleacetic acid bacteria promotes the enrichment of halotolerant bacteria during secondary fermentation of composting

The secondary fermentation stage is critical for stabilizing composting products and producing various secondary metabolites. However, the low metabolic rate of mesophilic bacteria is regarded as the rate-limiting stage in composting process. In present study, two indoleacetic acid (IAA)-producing bacteria (Bacillus safensis 33C and Corynebacterium stationis subsp. safensis 29B) were inoculated to strengthen the secondary fermentation stage to improve the plant-growth promoting potential of composting products. The results showed that the addition of IAA-producing bacteria promoted the assimilation of soluble salt, the condensation and aromatization of humus, and the accumulation of dissolved organic nitrogen (DON) and dissolved organic carbon (DOC). The bioaugmentation strategy also enabled faster microbial community succession during the medium-late phase of secondary fermentation. However, the colonization of Bacillus and Corynebacterium could not explain the disproportionate increase of IAA yield, which reached up to 5.6 times compared to the control group. Deeper analysis combined with physicochemical properties and microbial community structure suggested that IAA-producing bacteria might induce the increase of salinity, which enriched halotolerant bacteria capable of producing IAA, such as Halomonas, Brachybacterium and Flavobacterium. In addition, the results also proved that it was necessary to shorten secondary fermentation time to avoid IAA degradation without affecting composting maturity. In summary, enhancing secondary fermentation of composting via adding proper IAA-producing bacteria is an efficient strategy for upgrading the quality of organic fertilizer.

Effect of moisture content on the evolution of bacterial communities and organic matter degradation during bioaugmented biogas residues composting

Composting is an excellent way to recycle biogas residues into a stable, non-toxic agricultural end product. In this study, the dynamic changes of physical-chemical parameters and bacterial community in three groups of bioaugmentation composting systems at different moisture contents (MC) of 50% (MC50), 60% (MC60) and 70% (MC70) were monitored. The differences of bacterial communities in composts with different initial MC were compared, and the interaction between biological and non-biological parameters was also explored. The results revealed that after 30 days of composting, the biogas residues compost in MC60 reached highest temperature of 64 °C, total Kjeldahl nitrogen (TKN) of 2%, seed germination index (GI) of 110%, and the longest thermophilic period duration of 5 days (55 °C). Additionally, the result of high-throughput sequencing showed that the diversity of bacterial communities in MC60 was the highest, and the abundance of Actinobacteria (16.93-52.63%), Firmicutes (8.71-56.75%), and Proteobacteria (16.88-46.95%) in all groups were the highest at phylum level. The LEfSe analysis indicated that the abundance of Ochrobactrum and Cellulomonadaceae in MC60 was significantly (p < 0.05) higher than with other treatments. Moreover, canonical correspondence analysis (CCA) indicated thermophilic period duration is significantly (p < 0.05) positively correlated with Paenibacillus. Besides, it was found the relative abundance of Nocardiopsis and Georgenia has a significant (p < 0.01) correlation with the fertilizer efficiency of compost. These results showed that controlling the initial moisture content at 60% can improve the maturity and fertilizer efficiency of compost, and enable the bacteria beneficial to composting to gain the advantage of proliferation.

Variation in community structure and network characteristics of spent mushroom substrate (SMS) compost microbiota driven by time and environmental conditions

Global mushroom production is growing rapidly, raising concerns about polluting effects of spent mushroom substrate (SMS) and interest in uses in composts. In this study, SMS composting trials and high-throughput sequencing were carried out to investigate to better understand how the structure, co-occurrence patterns, and functioning of bacterial and fungal communities vary through compost time and across environmental conditions. The results suggested that both bacterial and fungal microbiota displayed significant variation in community composition across different composting stages. Enzyme activity levels showed both directional and fluctuating changes during composting, and the activity dynamics of carboxymethyl cellulase, polyphenol oxidase, laccase, and catalase correlated significantly with the succession of microbial community composition. The co-occurrence networks are "small-world" and modularized and the topological properties of each subnetwork were significantly influenced by the environmental factors. Finally, seed germination and seedling experiments were performed to verify the biosafety and effectiveness of the final composting products.

Succession of the microbial communities and metabolic functions in composting or deep burial processing of dead chickens

1. This study examined the effects of composting and deep burial techniques on degradation efficiency of dead chickens. Different raw materials (crushed branches or rape straws) and disinfectants (quicklime or bleaching powder) were applied in composting and deep burial process, respectively. The whole process lasted for 90 d in both summer and winter.2. High throughput sequencing displayed that Firmicutes, Proteobacteria, Bacteroidetes, Actinobacteria and Deinococcus-Thermus were the most dominant bacterial phyla during the experiment. The relative abundance of Firmicutes dwindled gradually with prolonged composting duration, while Proteobacteria, Bacteroidetes and Deinococcus-Thermous increased gradually over time.3. The bacterial functions identified from the KEGG pathway showed that amino acid and carbohydrate metabolism were the major microbial metabolic pathways that determined final degradation efficiency. At the end of the trial, the decomposition status of chicken carcasses and faecal coliforms were measured.4. The results demonstrated that the optimum decomposition effect was obtained in composting compared with other treatment groups. Low ambient temperature reduced degradation efficiency, due to restricted microbial activity. In addition, faecal coliforms were not completely removed by the deep burial process of dead chickens in winter.5.These findings provide a theoretical basis for the feasibility of composting chicken carcasses instead of deep burial.

Deciphering the effect of exogenous lignocellulases addition on the composting efficiency and microbial communities

This study aimed to reveal the potential effects of exogenous lignocellulases addition on the composting efficiency and microbial communities. The lignocellulases addition at the mesophilic phase (MEP) greatly expedited the substrate conversion and the rise of temperature at the initial stage, driving the early arrival of thermophilic phase (THP), caused by the positive effects of Sphingobacterium and Brevundimonas. When being added at the THP, the potential functions and interactions of microbial communities were stimulated, especially for Thermobispora and Mycothermus, which prolonged the duration of the THP and expedited the humic acid formation. Simultaneous addition (MEP and THP) significantly altered the microbial community succession and activated the microbes that contributed to the lignocellulases secretion, exhibiting the highest cellobiohydrolase (36.19 ± 3.25 U· g^-1 dw) and xylanase (47.51 ± 3.32 U·g^-1 dw) activity at the THP. These findings provide new strategies that can be effectively utilized to improve the efficiency and quality of composting.

Evaluation of bacterial agent/nitrate coupling on enhancing sulfur conversion and bacterial community succession during aerobic composting

This study evaluated the coupling effects of sodium nitrate (SN) and sulfur-oxidizing bacterial agent (BA) on oxidizing reduced-state sulfur and altering the bacteria community in SN, BA, and SN + BA treatments, respectively. Results revealed that bacterial inoculation prolonged the thermophilic period, facilitated organics degradation and compost humification. Compared to the control group, SN + BA treatment reduced the cumulative H₂S emissions and sulfur loss rate by 55.1 % and 15.7 %, respectively, and the nitrate reduction (used as electron donors) efficiency was enhanced by 7.8 % during the first week of composting. Bacterial inoculation altered the diversities and structure of the bacterial community by increasing the relative abundances of thermotolerant bacteria. Correlation analyses showed that the dominant phyla involved in nitrate-based sulfur-oxidizing reactions could be Firmicutes and Synergistota. These findings suggested the application viability of SN and BA to regulate the sulfur biotransformation and bacterial community in composting.

Effects of two types nitrogen sources on humification processes and phosphorus dynamics during the aerobic composting of spent mushroom substrate

Aerobic composting is increasingly regarded as a promising technology for the recycling of spent mushroom substrate (SMS), and an applicable nitrogen source is necessary to improve the process. This study is the first to investigate the effects of protein-like N source (chicken manure, CM) and high-N source (urea, UR) on humification process and P dynamics during SMS composting. The effect of different N sources on microbial succession was also studied. Results showed that CM addition achieved a longer thermophilic phase (16 d vs 9 d), greater germination indices (131.6% vs 106.3%), and higher total phosphorus content (13.1 g/kg vs 6.56 g/kg) in the end products, as compared to UR. The addition of CM showed beneficial effects on humification and stabilization, including decreased weight loss and fluctuations in the level of functional groups. The P produced in the compost was interconverted and leached in the P pool. In this case, the P detected in the compost was in the form of orthophosphate and MgNH₄PO₄⋅6H₂O crystal as inorganic P and orthophosphate monoester as organic P. The most abundant microorganisms at the phylum level mainly include Firmicutes, Actinobacteria, and Proteobacteria, accounting for more than 88% of the total microorganisms. The addition of CM to SMS compost resulted in higher organic matter degradation rates. This work clarified the role of various N sources in SMS composting and presented an appropriate waste management method beneficial to bioresource technology and sustainable development of the edible fungi business.

Effects of different additives and aerobic composting factors on heavy metal bioavailability reduction and compost parameters: A meta-analysis

Additives are considered a promising approach to accelerate the composting process and alleviate the dissemination of pollutants to the environment. However, nearly all previous articles have focused on the impact of additive amounts on the reduction of HMs, which may not fully represent the main factor shaping HMs bioavailability status during composting. Simultaneously, previous reviews only explored the impacts, speciation, and toxicity mechanism of HMs during composting. Hence, a global-scale meta-analysis was conducted to investigate the response patterns of HMs bioavailability and compost parameters to different additives, composting duration, and composting factors (additive types, feedstock, bulking agents, and composting methods) by measuring the weighted mean values of the response ratio "[ln (RR)]" and size effect (%). The results revealed that additives significantly lessened HMs bioavailability by ≥ 40% in the final compost products than controls. The bioavailability decline rates were -40%, -60%, -57%, -55%, -42%, and -44% for Zn, Pb, Ni, Cu, Cr, and Cd. Simultaneously, additives significantly improved the total nitrogen (TN) (+16%), pH (+5%), and temperature (+5%), and decreased total organic carbon (TOC) (-17%), moisture content (MC) (-18%), and C/N ratio (-19%). Furthermore, we found that the prolongation of composting time significantly promoted the effect of additives on declining HMs bioavailability (p < 0.05). Nevertheless, increasing additive amounts revealed an insignificant impact on decreasing the HMs bioavailability (p > 0.05). Eventually, using zeolite as an additive, chicken manure as feedstock, sawdust as a bulking agent, and a reactor as composting method had the most significant reduction effect on HMs bioavailability (p < 0.05). The findings of this meta-analysis may contribute to the selection, modification, and application of additives and composting factors to manage the level of bioavailable HMs in the compost products.

The important role of tricarboxylic acid cycle metabolism pathways and core bacterial communities in carbon sequestration during chicken manure composting

As a kind of livestock manure, chicken manure (CM) was rich in organic matter and microorganisms. However, a large amount of foul gas discharged by its random stacking not only threatened the environment, but also caused harm to human health. In view of the serious carbon loss and the unclear action mechanism of microbial community on carbon metabolism during CM composting, the effect of adding regulators on the sequestration of organic carbon was explored. Therefore, the purpose of this study was to explore the regulation mechanism of adding tricarboxylic acid cycle (TCA cycle) regulators on the core carbon metabolism pathway during CM composting. The results showed that the adenosine triphosphate (ATP) and malonic acid (MA) slowed down organic carbon degradation, resulting in lower carbon loss rate, which were 64.99% (CK), 62.35% (MA), and 61.26% (ATP) in each treatment. By comparing the abundance and structure of the carbon-related bacterial communities in different treatments, it was found that adding ATP and MA not only reduced the bacterial community abundance, but also tended to be similar in bacterial community composition. Moreover, the microbial specificity related to carbon metabolism pathway was enhanced, while the related gene expression and gene abundance were weakened. The regulation of TCA cycle metabolism pathway was confirmed to be the main way to improve organic carbon content. These findings revealed the positive effects of ATP and MA on carbon fixation from the perspective of gene metabolism.

Impact of wine grape pomace on humification performance and microbial dynamics during pig manure composting

The polyphenol humification pathway is essential for soil-forming and compost maturing processes. This study explored the effects of adding different proportions of polyphenol-rich wine grape pomace (WGP) on humification performance and microbial dynamics during pig manure (PM) composting. The results demonstrated that WGP effectively prolonged the duration of the thermophilic period, and improved humification production and compost maturity by enhancing beneficial interactions among microorganisms. Moreover, adding 40% WGP was optimal for nitrogen conservation, and the corresponding germination index (GI) reached 95%. Excitation-emission matrix (EEM) fluorescence spectroscopy analysis suggested that optimizing the WGP content was conducive to the conversion of protein-like substances, which improved the humification of organic matter. In addition, structural equation modelling (SEM) demonstrated that polyphenol content and temperature were the key parameters affecting the humification products. The results showed that WGP holds great promise to improve composting progress and fertilizer quality for biowaste utilization.

Genome Functional Analysis of the Psychrotrophic Lignin-Degrading Bacterium Arthrobacter sp. C2 and the Role of DyP in Catalyzing Lignin Degradation

In the cold regions of China, lignin-rich corn straw accumulates at high levels due to low temperatures. The application of psychrotrophic lignin-degrading bacteria should be an effective means of overcoming the low-temperature limit for lignin degradation and promoting the utilization of corn straw. However, this application is limited by the lack of suitable strains for decomposition of lignin; furthermore, the metabolic mechanism of psychrotrophic lignin-degrading bacteria is unclear. Here, the whole genome of the psychrotrophic lignin-degrading bacterium Arthrobacter sp. C2, isolated in our previous work, was sequenced. Comparative genomics revealed that C2 contained unique genes related to lignin degradation and low-temperature adaptability. DyP may participate in lignin degradation and may be a cold-adapted enzyme. Moreover, DyP was proven to catalyze lignin Cα-Cβ bond cleavage. Deletion and complementation of the DyP gene verified its ability to catalyze the first-step reaction of lignin degradation. Comparative transcriptomic analysis revealed that the transcriptional expression of the DyP gene was upregulated, and the genetic compensation mechanism allowed C2ΔDyP to degrade lignin, which provided novel insights into the survival strategy of the psychrotrophic mutant strain C2ΔdyP. This study improved our understanding of the metabolic mechanism of psychrotrophic lignin-degrading bacteria and provided potential application options for energy-saving production using cold-adapted lignin-degrading enzymes.

Full-Scale of a Compost Process Using Swine Manure, Human Feces, and Rice Straw as Feedstock

Regarding the composting of rural waste, numerous studies either addressed the composting of a single waste component or were conducted at a laboratory/pilot scale. However, far less is known about the mixed composting effect of multi-component rural waste on a large scale. Here, we examined nutrient transformation, maturity degree of decomposition, and succession of microbial communities in large-scale (1,000 kg mixed waste) compost of multi-component wastes previously optimized by response models. The results showed that multi-component compost can achieve the requirement of maturity and exhibit a higher nutritional value in actual compost. It is worth noting that the mixed compost effectively removed pathogenic fungi, in which almost no pathogenic fungi were detected, and only two pathogenic bacteria regrown in the cooling and maturation stages. Structural equation models revealed that the maturity (germination index and the ratio of ammonium to nitrate) of the product was directly influenced by compost properties (electrical conductivity, pH, total organic carbon, moisture, temperature, and total nitrogen) compared with enzymes (cellulase, urease, and polyphenol oxidase) and microbial communities. Moreover, higher contents of total phosphorus, nitrate-nitrogen, and total potassium were conducive to improving compost maturity, whereas relatively lower values of moisture and pH were more advantageous. In addition, compost properties manifested a remarkable indirect effect on maturity by affecting the fungal community (Penicillium and Mycothermus). Collectively, this evidence implies that mixed compost of multi-component rural waste is feasible, and its efficacy can be applied in practical applications. This study provides a solution for the comprehensive treatment and utilization of rural waste.

Processing Agroindustry By-Products for Obtaining Value-Added Products and Reducing Environmental Impact

Over four billion tons of foods are produced annually on the planet, and about a third is wasted. A minimal part of this waste is incinerated or sent to landfills for treatment, avoiding contamination and diseases; the rest is disposed of elsewhere. The current review was aimed at broadening the panorama on the potential of agroindustrial by-products in applications such as biofuels, biomaterials, biocompounds, pharmaceuticals, and food ingredients. It also exposes the main chemical, physical, and biochemical treatments for converting by-products into raw materials with added value through low environmental impact processes. The value of agroindustrial waste is limited due to the scarce information available. There is a need for further research in unexplored areas to find ways of adding value to these by-products and minimizing their contamination. Instead of throwing away or burning by-products, they can be transformed into useful materials such as polymers, fuels, antioxidants, phenols, and lipids, which will effectively reduce food waste and environmental impact.

Deciphering the dominant components and functions of bacterial communities for lignocellulose degradation at the composting thermophilic phase

The decomposition and transformation of organic matters during composting process are performed by various microorganisms. However, the bacterial communities and their functions usually vary with composting materials. Here the dominant bacterial genera and their functions were identified at the thermophilic phase during composting of mulberry branches with silkworm excrement (MSE), pig manure (MPM) and cow manure (MCD). The activities of β-glucosidase and endoglucanase were highest for MCD (1.31 and 17.15 µg g^-1 min^-1) and lowest for MPM (0.92 and 14.22 µg g^-1 min^-1). Random Forest model and correlation analysis revealed that Stenotrophomonas, Bacillus, and Sinibacillus were the dominant bacterial genera involved in lignocellulose degradation regardless of composting materials. Carbohydrate metabolism, amino acid metabolism, and DNA replication and repair were primary functions of the bacterial communities for the three types of composting. The quantification of lignocellulose degradation genes further verified the dominant functions of the bacterial communities.

Impact of microbial inoculants combined with humic acid on the fate of estrogens during pig manure composting under low-temperature conditions

To investigate the efficiency of psychrotrophic cellulose-degrading fungal strains (PCDFSs) and estrogen-degrading bacteria (EDBs) combined with humic acid (HA) on estrone (E1) and 17-β-estradiol (E2) degradation, five compost groups (T, HA, EDB, PCDFS, and CK) were prepared and composted for 32 days at 11-14°C. The results indicated that inoculation increased the temperature to 62.2°C and promoted E1 degradation to the lowest level of 100.1 ng/kg, while E2 was undetected from day 16. Metagenomic analysis revealed that inoculation altered the microbial community structure by increasing the abundance of cellulose-degrading fungi, especially Meyerozyma (16.7%) (among PCDFSs), and of estrogen-degrading bacteria, particularly Microbacterium (13.4%) (involved in EDBs). Moreover, inoculation increased the levels (>0.500%) of Gene Ontology (GO) associated with estrogen degradation, like 3-β-hydroxy-delta 5-steroid dehydrogenase and monooxygenase. Redundancy analysis demonstrated that temperature and Microbacterium were positively correlated with estrogen degradation. Structural equation model indicated that temperature and estrogen-degrading bacterial genera exhibited positive, significant (p < 0.001) and direct impacts on estrogen degradation. This is the first study to suggest that applying microbial inoculants and HA could accelerate estrogen degradation during composting in cold regions. The research outcomes offer a practical reference for managing compost safety, thereby decreasing its potential environmental and human health impacts.

Tetracycline hydrochloride-stressed succession in microbial communities during aerobic composting: Insights into bacterial and fungal structures

Available information that whether antibiotics affect the succession in microbial communities during aerobic composting remains limited. Thus, this work investigated the dynamic changes in bacterial and fungal structures during aerobic composting amended with tetracycline hydrochloride (TCH: 0, 50, 150 and 300 mg kg^-1). Composting phases significantly affected bacterial and fungal communities, but only fungi strongly responded to antibiotics, while bacteria did not. Firmicutes, Proteobacteria, Bacteroidota and Actinobacteriota were primary bacterial phylum. Neocallimastigomycota was dominant fungal phylum at temperature-heating phase, then Basidiomycota and Ascomycota became main fungal phylum at thermophilic and temperature-colling phases. Low TCH concentration promoted Chytridiomycota growth, while high TCH concentration inhibited mostly fungal activity in TCH-amended composting. Nitrogen species were critical factors controlling the succession in bacterial and fungal communities during composting process. These results cast a new light on understanding about microbial function during aerobic composting.

Combined addition of biochar and garbage enzyme improving the humification and succession of fungal community during sewage sludge composting

The influences of combination of garbage enzyme and biochar on total organic carbon (TOC) degradation, humification and the fungal succession during sewage sludge (SS) composting were established. Results showed that the GE and BC + GE treatments significantly increased the enzyme activity of fluorescein diacetate hydrolase (FDA) and increased the TOC degradation rate by 9.8% and 21.9% relative to control. The excitation-emission matrix (EEM) combined with the percentage fluorescence response (Pi, n) also proved that the combination of BC and GE promoted fulvic acid-like and humic-like substances production, and thus increased humification. Furthermore, the combination of BC and GE effectively decreased the relative abundance of Unclassified_k_Fugni, while increased the abundance of Ascomycota and Basidiomycota compared with control. The four genera, Pseudeurotium, Talaromyces, Trichoderma, and Penicillium, were the main fungi for the humification. Comparatively, the combined of BC and GE showed the optimal performance for TOC degradation and humification during SS composting.

Toxicity and physicochemical parameters of composts including distinct residues from agribusiness and slaughterhouse sludge

Composting is useful for treatment of residues from agribusiness, but the potential toxicity of the final compost should be evaluated before its agricultural destination. The objective of this study was to evaluate the physicochemical characteristics and the toxicity of agribusiness residues using onion seeds as bioindicators. All tested treatments were composed by sludge from a swine slaughterhouse and sawdust. Besides the control, which included no additional materials, the other treatments included aviary bedding, rice husk and residue from tobacco industries as structuring materials. After 120 days of composting, for all treatments, the temperature inside the composting piles approached the environmental temperature, the physicochemical parameters indicated that the composts were stabilized and, except for the treatment including tobacco residues, that could be used for agriculture without impairing plant germination. Although the treatments including tobacco residues and rice husk showed evidence of cytotoxicity and genotoxicity at the beginning of the composting period, that was not observed for the treatment including aviary bedding. Such potential toxicity was not observed at the end of composting for any of the tested treatments.

Biochar regulates bacterial-fungal diversity and associated enzymatic activity during sheep manure composting

Aimed to evaluate the coexistence of bacterial and fungal diversity and their correlation with enzymatic activity in response to biochar. This study performed aerobic composting based on typical agricultural wastes of sheep manure with additive apple tree branch biochar at distinct concentration (0, 2.5, 5, 7.5, 10 and 12.5% corresponding from T1 to T6). The result demonstrated that appropriate amendment of biochar enriched bacterial diversity (1646-1686 OTUs) but interestingly decreased fungal diversity (542-630 OTUs) compared to control (1444 and 682 OTUs). Biochar addition enhanced all enzymatic activities and its correlation with bacterial was more complex than fungal community (786 and 359 connect edges). The dominant microbes comprised of Firmicutes (45.2-35.2%), Proteobacteria (14.0-17.5%), Basidiomycota (32.4-49.5%) and Ascomycota (11.3-37.5%) among all the treatments. Overall, biochar regulates the composting microenvironment by influencing the microbial diversity and associated enzymatic activities.

Key factors affecting seed germination in phytotoxicity tests during sheep manure composting with carbon additives

The germination index (GI) was widely applied to evaluate the phytotoxicity of compost. This study investigated the key phytotoxicity factors affecting seed germination in compost by using aqueous extracts in seed germination tests. The relationship between water-soluble substances in compost and seed germination, and their association with the microbial community were identified. In this study, sheep manure (SM) composted along or with three carbon additives (mushroom substrate, MS; cornstalks, CS; garden substrate, GS) for 49 days and, during this time, changes in multiple physical-chemical parameters, carbon and nitrogen matters, germination indexes (GI) and the compost microbiome were monitored. The results showed that all additives decreased water-soluble total nitrogen (TN), ammonium nitrogen (NH₄⁺-N) and low molecular weight organic acids, and significantly improved the seed germination indexes (seed germination rate, radical length and GI). The GI was correlated with water-soluble carbon degradation products (TOC, butyric acid, humic acid) and certain bacteria (Planifilum, Oceanobacillus, Ruminococcaceae_UCG_005 and Saccharomonospora). A structural equation model revealed that the main factors affecting seed germination were TOC (SM compost), acetic acid (SM+MS compost), humic acid (SM+CS compost), and pH (SM+GS compost). Low TOC and low molecular weight organic acids contents and higher humic acid content promoted GI. The research results could provide theoretical basis and measures for directional regulation of compost maturity.

Lignocellulose biomass bioconversion during composting: Mechanism of action of lignocellulase, pretreatment methods and future perspectives

Composting is a biodegradation and transformation process that converts lignocellulosic biomass into value-added products, such as humic substances (HSs). However, the recalcitrant nature of lignocellulose hinders the utilization of cellulose and hemicellulose, decreasing the bioconversion efficiency of lignocellulose. Pretreatment is an essential step to disrupt the structure of lignocellulosic biomass. Many pretreatment methods for composting may cause microbial inactivation and death. Thus, the pretreatment methods suitable for composting can promote the degradation and transformation of lignocellulosic biomass. Therefore, this review summarizes the pretreatment methods suitable for composting. Microbial consortium pretreatment, Fenton pretreatment and surfactant-assisted pretreatment for composting may improve the bioconversion process. Microbial consortium pretreatment is a cost-effective pretreatment method to enhance HSs yields during composting. On the other hand, the efficiency of enzyme production during composting is very important for the degradation of lignocellulose, whose action mechanism is unknown. Therefore, this review describes the mechanism of action of lignocellulase, the predominant microbes producing lignocellulase and their related genes. Finally, optimizing pretreatment conditions and increasing enzymatic hydrolysis to improve the quality of composts by controlling suitable microenvironmental factors and core target microbial activities as a research focus in the bioconversion of lignocellulose during composting in the future.

Effect of bioaugmentation on lignocellulose degradation and antibiotic resistance genes removal during biogas residues composting

In this study, six strains belonging to Alcaligenes, Enterobacter and Bacillus were employed to enhance the composting process of biogas residues and agricultural wastes. The dynamic changes of dissolved organic matter (DOM), microbial community and functional genes in composting was monitored. It was found bioaugmentation reduced the content of lignocellulose in the compost by 27.14-66.30%, and increased the seed germination index (GI) of the compost by 37.59%. Metagenomics analysis of the composting process indicated Proteobacteria (35.38%-64.19%), Actinobacteria (11.24%-28.93%) and Bacteroidetes (3.65%-9.57%) are the dominant microorganisms during the bioaugmented composting. The abundance of genes associated with glycoside hydrolase was obviously enhanced and the antibiotic resistance genes (ARGs) was significantly reduced during the bioaugmented composting. Following nursery investigation indicated the seedling substrates composed of bioaugmented compost increased the dry weight of tomato seedlings by 1.7 times, revealing obvious large-scale application potential in the resource utilization of agricultural wastes.

Isolation of a novel psychrotrophic fungus for efficient low-temperature composting

This study aimed to isolate psychrotrophic cellulose-degrading fungi and to investigate their application potential for composting in cold climate regions in China. One out of five psychrotrophic cellulose-degrading fungal isolates was identified as a novel fungal species, Aureobasidium paleasum sp. nov., with a strong straw degradation potential. Enzyme activity assays and FITR spectroscopy revealed high cellulolytic activities of this psychrotrophic fungus at lower temperatures, with high thermal adaptability from 5 °C to 50 °C (optimum at 10 °C). A. paleasum efficiently decomposed rice straws and cellulose at 10 °C compared to the common cellulose-degrading fungus Penicillium oxalicum. In comparison to P. oxalicum, A. paleasum shortened the thermophilic stage, enhanced compost maturity and improved compost quality. Our work suggests that the psychrotrophic fungus A. paleasum is efficient for rice straw degradation and composting at low temperatures, highlighting its application potential for composting in colder regions.

The action difference of metabolic regulators on carbon conversion during different agricultural organic wastes composting

The purpose of this study is to explore the action characteristics of metabolic regulators like adenosine tri-phosphate (ATP) and malonic acid (MA) during rice straw (RS) and fruit and vegetable waste (FVW) composting. Results showed that due to the easy degradation difference, ATP and MA reduced CO₂ emission in RS and FVW, respectively. Moreover, adding ATP and MA increased humic acids (HA) content in FVW more significantly (p < 0.05), especially for ATP. However, adding MA accelerated organic matter degradation during RS composting, which was basically consistent with CO₂ emission, but it was not effective in promoting HA formation. Furthermore, the microbial community was reshaped by adding ATP and MA. Eventually, structural equation model further confirmed that adding metabolic regulators enhanced the biotic and abiotic pathways of HA formation, and the promotion effect of adding ATP was more obvious. The study has great practical significance for the dispose of agricultural waste.

Factoring distinct materials and nitrogen-related microbes into assessments of nitrogen pollution risks during composting

The aim of this study was to evaluate nitrogen pollution risks from distinct materials composting with the discrepancy of component, including chicken manure, municipal solid and straw waste (CM, MSW, SW). Results showed total nitrogen maximum mean concentrations were observed in CM (39.57 g/kg). Pollution risks in CM were continuous, while MSW and SW mainly concentrated during heating phases. Microbial analysis confirmed that pollution risks from ammonification and nitrification were more prevalent in CM. The risks of pollution caused by nitrate reduction accompanied N₂O were the most serious in MSW. The multifunctional nitrogen-related microbes Pseudomonas and Bacillus were affected by microenvironments and contributed to different pollution risks. Furthermore, PICRUSt analysis identified the "inferred" key genes (pmoC-amoC, nrfH, nifD etc.) related to nitrogen pollution risks. This study evaluated nitrogen pollution risks and proposed the future directions, providing theoretical basis and feasible optimization measures for the mitigation of nitrogen pollution during composting.

Identifying environmental hotspots and improvement strategies of vanillin production with life cycle assessment

Vanillin, an important aroma chemical, can be synthesized through industrial oxidation processes and biotechnological processes. Studying the environmental impacts of synthetic vanillin production processes is fundamental to making these processes feasible and sustainable; however, few studies have focused on such analyses. This study involved performing a life cycle assessment (LCA) to evaluate multiple industrial synthesis and biosynthesis processes for producing synthetic vanillin. The results indicated that human toxicity potential (HTP) appeared to be the most affected indicator among all the impact categories considered. The dominant drivers of the HTP of the vanillin synthesis process were electricity consumption and ultrapure water consumption. Improvement strategies were then proposed to investigate the possibility of reducing the environmental burdens created by vanillin synthesis. Natural gas power generation was determined to be the best choice for replacing traditional coal-fired power generation, thus reducing the negative impacts of these processes on the environment. The best ways to reduce chemical consumption were to recover organic solvents and to replace ultrapure water with industrial or distilled water. All these improvement strategies were demonstrated to be able to effectively reduce the HTP. In addition, suggestions for evaluating scaled-up vanillin production, increasing the LCA coverage to include technological advancements in biosynthesis techniques, and introducing cost-benefit analysis into the LCA were discussed.

Changes of fungal diversity in fine coal gasification slag amendment pig manure composting

The purpose of this study was to investigate fungal diversity and relative abundance (RA) during pig manure composting via high-throughput sequencing approach. Fine coal gasification slag (FCGS) (0%, 2%, 4%, 6%, 8% and 10%) were added into composting raw materials as additive and performed 42 days. Adjust C/N and moisture to 30 and 65%. Results showed that dominant phyla were Ascomycota (99.62%) and Basidiomycota (0.38%). The main genera were Epicoccum (1.26%), Alternaria (83.35%), Aspergillus (12.08%) and Gibberella (1.69%). 10% treatment got the higher abundance and operational taxonomic units number from rank abundance curve and petals diagram. Compared with control, FCGS amendment composting could increase the sanitary time (3-7 d) and total nitrogen (0.05-12.03%). The principal component analysis was considered that FCGS treatments and control had significantly difference. The RA of fungi varied among all treatments. Therefore, 10% treatment was a potential candidate to enhance fungal diversity and composting quality.