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Song B, Chen J, Lev-Yadun S, Niu Y, Gao Y, Ma R, Armbruster WS, Sun H. Multifunctionality of angiosperm floral bracts: a review. Biol Rev Camb Philos Soc 2024; 99:1100-1120. [PMID: 38291834 DOI: 10.1111/brv.13060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 01/02/2024] [Accepted: 01/22/2024] [Indexed: 02/01/2024]
Abstract
Floral bracts (bracteoles, cataphylls) are leaf-like organs that subtend flowers or inflorescences but are of non-floral origin; they occur in a wide diversity of species, representing multiple independent origins, and exhibit great variation in form and function. Although much attention has been paid to bracts over the past 150 years, our understanding of their adaptive significance remains remarkably incomplete. This is because most studies of bract function and evolution focus on only one or a few selective factors. It is widely recognised that bracts experience selection mediated by pollinators, particularly for enhancing pollinator attraction through strong visual, olfactory, or echo-acoustic contrast with the background and through signalling the presence of pollinator rewards, either honestly (providing rewards for pollinators), or deceptively (attraction without reward or even trapping pollinators). However, studies in recent decades have demonstrated that bract evolution is also affected by agents other than pollinators. Bracts can protect flowers, fruits, or seeds from herbivores by displaying warning signals, camouflaging conspicuous reproductive organs, or by providing physical barriers or toxic chemicals. Reviews of published studies show that bracts can also promote seed dispersal and ameliorate the effects of abiotic stressors, such as low temperature, strong ultraviolet radiation, heavy rain, drought, and/or mechanical abrasion, on reproductive organs or for the plants' pollinators. In addition, green bracts and greening of colourful bracts after pollination promote photosynthetic activity, providing substantial carbon (photosynthates) for fruit or seed development, especially late in a plant's life cycle or season, when leaves have started to senesce. A further layer of complexity derives from the fact that the agents of selection driving the evolution of bracts vary between species and even between different developmental stages within a species, and selection by one agent can be reinforced or opposed by other agents. In summary, our survey of the literature reveals that bracts are multifunctional and subject to multiple agents of selection. To understand fully the functional and evolutionary significance of bracts, it is necessary to consider multiple selection agents throughout the life of the plant, using integrative approaches to data collection and analysis.
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Affiliation(s)
- Bo Song
- Key Laboratory for Plant Diversity and Biogeography of East Asia/Yunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Jiaqi Chen
- Key Laboratory for Plant Diversity and Biogeography of East Asia/Yunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
- School of Life Sciences, Yunnan University, Huannan Road, East of University Town, Chenggong New Area, Kunming, 650500, China
| | - Simcha Lev-Yadun
- Department of Biology and Environment, Faculty of Natural Sciences, University of Haifa at Oranim, Kiryat Tiv'on, 36006, Israel
| | - Yang Niu
- Key Laboratory for Plant Diversity and Biogeography of East Asia/Yunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - Yongqian Gao
- Yunnan Forestry Technological College, 1 Jindian, Kunming, 650224, China
| | - Rong Ma
- Key Laboratory for Plant Diversity and Biogeography of East Asia/Yunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
| | - W Scott Armbruster
- School of Biological Sciences, University of Portsmouth, King Henry Building, King Henry I Street, Portsmouth, PO1 2DY, UK
- Institute of Arctic Biology, University of Alaska, PO Box 757000, Fairbanks, AK, 99775, USA
| | - Hang Sun
- Key Laboratory for Plant Diversity and Biogeography of East Asia/Yunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming, 650201, China
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Hu J, Bettembourg M, Xue L, Hu R, Schnürer A, Sun C, Jin Y, Sundström JF. A low-methane rice with high-yield potential realized via optimized carbon partitioning. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 920:170980. [PMID: 38373456 DOI: 10.1016/j.scitotenv.2024.170980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Revised: 01/25/2024] [Accepted: 02/13/2024] [Indexed: 02/21/2024]
Abstract
Global rice cultivation significantly contributes to anthropogenic methane emissions. The methane emissions are caused by methane-producing microorganisms (methanogenic archaea) that are favoured by the anoxic conditions of paddy soils and small carbon molecules released from rice roots. However, different rice cultivars are associated with differences in methane emission rates suggesting that there is a considerable natural variation in this trait. Starting from the hypothesis that sugar allocation within a plant is an important factor influencing both yields and methane emissions, the aim of this study was to produce high-yielding rice lines associated with low methane emissions. In this study, the offspring (here termed progeny lines) of crosses between a newly characterized low-methane rice variety, Heijing 5, and three high-yielding elite varieties, Xiushui, Huayu and Jiahua, were selected for combined low-methane and high-yield properties. Analyses of total organic carbon and carbohydrates showed that the progeny lines stored more carbon in above-ground tissues than the maternal elite varieties. Also, metabolomic analysis of rhizospheric soil surrounding the progeny lines showed reduced levels of glucose and other carbohydrates. The carbon allocation, from roots to shoots, was further supported by a transcriptome analysis using massively parallel sequencing of mRNAs that demonstrated elevated expression of the sugar transporters SUT-C and SWEET in the progeny lines as compared to the parental varieties. Furthermore, measurement of methane emissions from plants, grown in greenhouse as well as outdoor rice paddies, showed a reduction in methane emissions by approximately 70 % in the progeny lines compared to the maternal elite varieties. Taken together, we report here on three independent low-methane-emission rice lines with high yield potential. We also provide a first molecular characterisation of the progeny lines that can serve as a foundation for further studies of candidate genes involved in sugar allocation and reduced methane emissions from rice cultivation.
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Affiliation(s)
- Jia Hu
- Department of Plant Biology, Sweden University of Agricultural Science, The Linnean Centre for Plant Biology, Box 7080, SE-75007 Uppsala, Sweden
| | - Mathilde Bettembourg
- Department of Plant Biology, Sweden University of Agricultural Science, The Linnean Centre for Plant Biology, Box 7080, SE-75007 Uppsala, Sweden
| | - Lihong Xue
- Key Laboratory of Agro-environment in Downstream of Yangtze plain, Ministry of Agriculture and Rural Affairs of China, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China
| | - Ronggui Hu
- College of Resources and Environment, Huazhong Agricultural University, Wuhan 43070, China
| | - Anna Schnürer
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, Box 7015, SE-750 07 Uppsala, Sweden
| | - Chuanxin Sun
- Department of Plant Biology, Sweden University of Agricultural Science, The Linnean Centre for Plant Biology, Box 7080, SE-75007 Uppsala, Sweden
| | - Yunkai Jin
- Department of Plant Biology, Sweden University of Agricultural Science, The Linnean Centre for Plant Biology, Box 7080, SE-75007 Uppsala, Sweden
| | - Jens F Sundström
- Department of Plant Biology, Sweden University of Agricultural Science, The Linnean Centre for Plant Biology, Box 7080, SE-75007 Uppsala, Sweden.
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Manasseh R, Sathuvalli V, Pappu HR. Transcriptional and functional predictors of potato virus Y-induced tuber necrosis in potato ( Solanum tuberosum). FRONTIERS IN PLANT SCIENCE 2024; 15:1369846. [PMID: 38638354 PMCID: PMC11024271 DOI: 10.3389/fpls.2024.1369846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/13/2024] [Accepted: 02/26/2024] [Indexed: 04/20/2024]
Abstract
Introduction Potato (Solanum tuberosum L.), the fourth most important food crop in the world, is affected by several viral pathogens with potato virus Y (PVY) having the greatest economic impact. At least nine biologically distinct variants of PVY are known to infect potato. These include the relatively new recombinant types named PVY-NTN and PVYN-Wi, which induce tuber necrosis in susceptible cultivars. To date, the molecular plant-virus interactions underlying this pathogenicity have not been fully characterized. We hypothesized that this necrotic behavior is supported by transcriptional and functional signatures that are unique to PVY-NTN and PVYN-Wi. Methods To test this hypothesis, transcriptional responses of cv. Russet Burbank, a PVY susceptible cultivar, to three PVY strains PVY-O, PVY-NTN, and PVYN-Wi were studied using mRNA-Seq. A haploid-resolved genome assembly for tetraploid potato was used for bioinformatics analysis. Results The study revealed 36 GO terms and nine KEGG 24 pathways that overlapped across the three PVY strains, making them generic features of PVY susceptibility in potato. Ten GO terms and three KEGG pathways enriched for PVY-NTN and PVYN-Wi only, which made them candidate functional signatures associated with PVY-induced tuber necrosis in potato. In addition, five other pathways were enriched for PVYNTN or PVYN-Wi. One carbon pool by folate was enriched exclusively in response to PVY-NTN infection; PVYN-Wi infection specifically impacted cutin, suberine and wax biosynthesis, phenylalanine metabolism, phenylalanine, tyrosine and tryptophan biosynthesis, and monoterpenoid biosynthesis. Discussion Results suggest that PVYN-Wi-induced necrosis may be mechanistically distinguishable from that of PVY-NTN. Our study provides a basis for understanding the mechanism underlying the development of PVY-induced tuber necrosis in potato.
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Affiliation(s)
- Richard Manasseh
- Department of Plant Pathology, Washington State University, Pullman, WA, United States
| | - Vidyasagar Sathuvalli
- Hermiston Agricultural Research and Extension Center, Oregon State University, Hermiston, OR, United States
| | - Hanu R. Pappu
- Department of Plant Pathology, Washington State University, Pullman, WA, United States
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Lorenzati MA, Aliscioni NL, Delbón NE, Gurvich DE. Growing or reproducing? Assessing the existence of a trade-off in the globose cactus Gymnocalycium monvillei. PLANT BIOLOGY (STUTTGART, GERMANY) 2024; 26:476-484. [PMID: 38349815 DOI: 10.1111/plb.13626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Accepted: 01/29/2024] [Indexed: 02/15/2024]
Abstract
Resource allocation in plants is a fundamental aspect of life history theory. In Cactaceae, the specific trade-off between sexual reproduction and vegetative growth has still not been studied. The aim of this work was to assess if there is a trade-off between growth and reproduction, and to analyse whether both growth and allocation to reproduction depend on size of the individual. In this study, we used Gymnocalycium monvillei, a globose cactus endemic to the mountains of central Argentina, as a model species. Specifically, we analysed the relationship of growth (percentage increase in diameter) and size of individuals (diameter) to seed production, seed mass, germination, and mean germination time. To relativize the effect of size on seed production, two variables were calculated: the ratio of seed production to plant size (RSPS), and the ratio of total seed mass to plant size (RSMS). We found that both seed production and total seed mass were significantly related to cactus size. However, growth was not related to seed mass or to seed production, even when they were relativized. Germination and mean germination time were not related to plant size or growth. In the studied species, a slow-growing globose cactus, we did not find a trade-off between growth and reproduction.
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Affiliation(s)
- M A Lorenzati
- Instituto Multidisciplinario de Biología Vegetal (FCEFyN, CONICET-UNC), Córdoba, Argentina
| | - N L Aliscioni
- Instituto Multidisciplinario de Biología Vegetal (FCEFyN, CONICET-UNC), Córdoba, Argentina
| | - N E Delbón
- Instituto Multidisciplinario de Biología Vegetal (FCEFyN, CONICET-UNC), Córdoba, Argentina
- Facultad de Ciencias Exactas, Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina
| | - D E Gurvich
- Instituto Multidisciplinario de Biología Vegetal (FCEFyN, CONICET-UNC), Córdoba, Argentina
- Facultad de Ciencias Exactas, Físicas y Naturales, Universidad Nacional de Córdoba, Córdoba, Argentina
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Su F, Zhao B, Dhondt-Cordelier S, Vaillant-Gaveau N. Plant-Growth-Promoting Rhizobacteria Modulate Carbohydrate Metabolism in Connection with Host Plant Defense Mechanism. Int J Mol Sci 2024; 25:1465. [PMID: 38338742 PMCID: PMC10855160 DOI: 10.3390/ijms25031465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2023] [Revised: 01/08/2024] [Accepted: 01/09/2024] [Indexed: 02/12/2024] Open
Abstract
Plant-growth-promoting rhizobacteria (PGPR) could potentially enhance photosynthesis and benefit plant growth by improving soil nutrient uptake and affecting plant hormone balance. Several recent studies have unveiled a correlation between alterations in photosynthesis and host plant resistance levels. Photosynthesis provides materials and energy for plant growth and immune defense and affects defense-related signaling pathways. Photosynthetic organelles, which could be strengthened by PGPR inoculation, are key centers for defense signal biosynthesis and transmission. Although endophytic PGPRs metabolize plant photosynthates, they can increase soluble sugar levels and alternate sugar type and distribution. Soluble sugars clearly support plant growth and can act as secondary messengers under stressed conditions. Overall, carbohydrate metabolism modifications induced by PGPR may also play a key role in improving plant resistance. We provide a concise overview of current knowledge regarding PGPR-induced modulation in carbohydrate metabolism under both pathogen-infected and pathogen-free conditions. We highlight PGPR application as a cost-saving strategy amidst unpredictable pathogen pressures.
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Affiliation(s)
- Fan Su
- Institute of Agro-Product Safety and Nutrition, Tianjin Academy of Agricultural Sciences, Tianjin 300071, China;
| | - Bin Zhao
- State Key Laboratory of North China Crop Improvement and Regulation, College of Plant Protection, Hebei Agricultural University, Baoding 071001, China;
| | - Sandrine Dhondt-Cordelier
- Unité de Recherche Résistance Induite et Bioprotection des Plantes—USC INRAE 1488, Université de Reims Champagne Ardenne, 51100 Reims, France;
| | - Nathalie Vaillant-Gaveau
- Unité de Recherche Résistance Induite et Bioprotection des Plantes—USC INRAE 1488, Université de Reims Champagne Ardenne, 51100 Reims, France;
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Li A, Lv D, Zhang Y, Zhang D, Zong Y, Shi X, Li P, Hao X. Elevated CO 2 concentration enhances drought resistance of soybean by regulating cell structure, cuticular wax synthesis, photosynthesis, and oxidative stress response. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 206:108266. [PMID: 38103338 DOI: 10.1016/j.plaphy.2023.108266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 11/04/2023] [Accepted: 12/06/2023] [Indexed: 12/19/2023]
Abstract
The atmospheric [CO2] and the frequency and intensity of extreme weather events such as drought are increased, leading to uncertainty to soybean production. Elevated [CO2] (eCO2) partially mitigates the adverse effects of drought stress on crop growth and photosynthetic performance, but the mitigative mechanism is not well understood. In this study, soybean seedlings under drought stress simulated by PEG-6000 were grown in climate chambers with different [CO2] (400 μmol mol-1 and 700 μmol mol-1). The changes in anatomical structure, wax content, photosynthesis, and antioxidant enzyme were investigated by the analysis of physiology and transcriptome sequencing (RNA-seq). The results showed that eCO2 increased the thickness of mesophyll cells and decreased the thickness of epidermal cells accompanied by reduced stomatal conductance, thus reducing water loss in soybean grown under drought stress. Meanwhile, eCO2 up-regulated genes related to wax anabolism, thus producing more epidermal wax. Under drought stress, eCO2 increased net photosynthetic rate (PN), ribulose-1,5-bisphosphate carboxylase/oxygenase activity, and alerted the gene expressions in photosynthesis. The increased sucrose synthesis and decreased sucrose decomposition contributed to the progressive increase in the soluble saccharide contents under drought stress with or without eCO2. In addition, eCO2 increased the expressions of genes associated with peroxidase (POD) and proline (Pro), thus enhancing POD activity and Pro content and improving the drought resistance in soybean. Taken together, these findings deepen our understanding of the effects of eCO2 on alleviating drought stress in soybean and provide potential target genes for the genetic improvement of drought tolerance in soybean.
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Affiliation(s)
- Ali Li
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China; Hybrid Rape Research Center of Shaanxi Province, Yangling, 712100, China
| | - Danni Lv
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China
| | - Yan Zhang
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China
| | - Dongsheng Zhang
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China
| | - Yuzheng Zong
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China
| | - Xinrui Shi
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China
| | - Ping Li
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China.
| | - Xingyu Hao
- College of Agriculture, Shanxi Agricultural University, Taigu, 030800, Shanxi, China.
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Bitomský M, Martínková J, Lubbe FC, Marešová I, Klimešová J. Genome size is strongly linked to carbohydrate storage and weakly linked to root sprouting ability in herbs. ANNALS OF BOTANY 2023; 132:1021-1032. [PMID: 37823724 PMCID: PMC10808013 DOI: 10.1093/aob/mcad158] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 10/10/2023] [Indexed: 10/13/2023]
Abstract
BACKGROUND AND AIMS Several lines of evidence indicate that carbohydrate storage in plant below-ground organs might be positively related to genome size because both these plant properties represent resource sinks and can affect cell size, cell cycle time, water-use efficiency and plant growth. However, plants adapted to disturbance, such as root sprouters, could be an exception because their strategy would require higher carbohydrate reserves to fuel biomass production but small genomes to complete their cell cycles faster. METHODS We used data from a field survey to test the relationship between genome size and the probability of root sprouting ability in 172 Central European herbaceous species. Additionally, we conducted a pot experiment with 19 herbaceous species with different sprouting ability (nine congeneric pairs plus one species), and measured root non-structural carbohydrate concentrations and pools at the end of a growing season. KEY RESULTS In the Central European flora, the probability of root sprouting ability was lower in large-genome species but this pattern was weak. In the pot experiment, both total non-structural and water-soluble carbohydrates (mainly fructans) were positively and non-linearly related to genome size, regardless of sprouting strategy. The concentrations of mono- and disaccharides and all carbohydrate pools showed no link to genome size, and starch was absent in large-genome species. The link between genome size and carbohydrate storage was less apparent at a small phylogenetic scale because we only observed a higher carbohydrate concentration in species with larger genomes for four of the species pairs. CONCLUSIONS Root sprouters may have smaller genomes because of their frequent occurrence in dry and open habitats. Large-genome species with presumably large cells and vacuoles could accumulate more water-soluble carbohydrates at the end of the growing season to fuel their growth and perhaps protect vulnerable organs from freezing early in the next season.
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Affiliation(s)
- Martin Bitomský
- Institute of Botany of the Czech Academy of Sciences, Dukelská 135, 379 01 Třeboň, Czech Republic
| | - Jana Martínková
- Institute of Botany of the Czech Academy of Sciences, Dukelská 135, 379 01 Třeboň, Czech Republic
| | - F Curtis Lubbe
- Institute of Botany of the Czech Academy of Sciences, Dukelská 135, 379 01 Třeboň, Czech Republic
| | - Iveta Marešová
- Institute of Botany of the Czech Academy of Sciences, Dukelská 135, 379 01 Třeboň, Czech Republic
| | - Jitka Klimešová
- Institute of Botany of the Czech Academy of Sciences, Dukelská 135, 379 01 Třeboň, Czech Republic
- Department of Botany, Charles University, Benátská 2, 128 01 Prague, Czech Republic
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Zhou Z, Zhang Z, van der Putten PEL, Fabre D, Dingkuhn M, Struik PC, Yin X. Triose phosphate utilization in leaves is modulated by whole-plant sink-source ratios and nitrogen budgets in rice. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:6692-6707. [PMID: 37642225 PMCID: PMC10662237 DOI: 10.1093/jxb/erad329] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2023] [Accepted: 08/25/2023] [Indexed: 08/31/2023]
Abstract
Triose phosphate utilization (TPU) is a biochemical process indicating carbon sink-source (im)balance within leaves. When TPU limits leaf photosynthesis, photorespiration-associated amino acid exports probably provide an additional carbon outlet and increase leaf CO2 uptake. However, whether TPU is modulated by whole-plant sink-source relations and nitrogen (N) budgets remains unclear. We address this question by model analyses of gas-exchange data measured on leaves at three growth stages of rice plants grown at two N levels. Sink-source ratio was manipulated by panicle pruning, by using yellower-leaf variant genotypes, and by measuring photosynthesis on adaxial and abaxial leaf sides. Across all these treatments, higher leaf N content resulted in the occurrence of TPU limitation at lower intercellular CO2 concentrations. Photorespiration-associated amino acid export was greater in high-N leaves, but was smaller in yellower-leaf genotypes, panicle-pruned plants, and for abaxial measurement. The feedback inhibition of panicle pruning on rates of TPU was not always observed, presumably because panicle pruning blocked N remobilization from leaves to grains and the increased leaf N content masked feedback inhibition. The leaf-level TPU limitation was thus modulated by whole-plant sink-source relations and N budgets during rice grain filling, suggesting a close link between within-leaf and whole-plant sink limitations.
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Affiliation(s)
- Zhenxiang Zhou
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, The Netherlands
| | - Zichang Zhang
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, The Netherlands
- Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, Jiangsu, China
| | - Peter E L van der Putten
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, The Netherlands
| | - Denis Fabre
- CIRAD, UMR AGAP Institut, F-34398 Montpellier, France
- UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Michael Dingkuhn
- CIRAD, UMR AGAP Institut, F-34398 Montpellier, France
- UMR AGAP Institut, Univ Montpellier, CIRAD, INRAE, Institut Agro, Montpellier, France
| | - Paul C Struik
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, The Netherlands
| | - Xinyou Yin
- Centre for Crop Systems Analysis, Department of Plant Sciences, Wageningen University & Research, PO Box 430, 6700 AK Wageningen, The Netherlands
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9
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Asad MAU, Guan X, Zhou L, Qian Z, Yan Z, Cheng F. Involvement of plant signaling network and cell metabolic homeostasis in nitrogen deficiency-induced early leaf senescence. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 336:111855. [PMID: 37678563 DOI: 10.1016/j.plantsci.2023.111855] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 08/28/2023] [Accepted: 08/30/2023] [Indexed: 09/09/2023]
Abstract
Nitrogen (N) is a basic building block that plays an essential role in the maintenance of normal plant growth and its metabolic functions through complex regulatory networks. Such the N metabolic network comprises a series of transcription factors (TFs), with the coordinated actions of phytohormone and sugar signaling to sustain cell homeostasis. The fluctuating N concentration in plant tissues alters the sensitivity of several signaling pathways to stressful environments and regulates the senescent-associated changes in cellular structure and metabolic process. Here, we review recent advances in the interaction between N assimilation and carbon metabolism in response to N deficiency and its regulation to the nutrient remobilization from source to sink during leaf senescence. The regulatory networks of N and sugar signaling for N deficiency-induced leaf senescence is further discussed to explain the effects of N deficiency on chloroplast disassembly, reactive oxygen species (ROS) burst, asparagine metabolism, sugar transport, autophagy process, Ca2+ signaling, circadian clock response, brassinazole-resistant 1 (BZRI), and other stress cell signaling. A comprehensive understanding for the metabolic mechanism and regulatory network underlying N deficiency-induced leaf senescence may provide a theoretical guide to optimize the source-sink relationship during grain filling for the achievement of high yield by a selection of crop cultivars with the properly prolonged lifespan of functional leaves and/or by appropriate agronomic managements.
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Affiliation(s)
- Muhammad Asad Ullah Asad
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Xianyue Guan
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Lujian Zhou
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Zhao Qian
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China; School of Biological and Chemical Engineering, Zhejiang University of Science and Technology, Hangzhou, China
| | - Zhang Yan
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Fangmin Cheng
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China; Jiangsu Collaborative Innovation Centre for Modern Crop Production, Nanjing, China.
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10
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Ozawa Y, Tanaka A, Suzuki T, Sugiura D. Sink-source imbalance triggers delayed photosynthetic induction: Transcriptomic and physiological evidence. PHYSIOLOGIA PLANTARUM 2023; 175:e14000. [PMID: 37882282 DOI: 10.1111/ppl.14000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 08/01/2023] [Accepted: 08/06/2023] [Indexed: 10/27/2023]
Abstract
Sink-source imbalance causes accumulation of nonstructural carbohydrates (NSCs) and photosynthetic downregulation. However, despite numerous studies, it remains unclear whether NSC accumulation or N deficiency more directly decreases steady-state maximum photosynthesis and photosynthetic induction, as well as underlying gene expression profiles. We evaluated the relationship between photosynthetic capacity and NSC accumulation induced by cold girdling, sucrose feeding, and low nitrogen treatment in Glycine max and Phaseolus vulgaris. In G. max, changes in transcriptome profiles were further investigated, focusing on the physiological processes of photosynthesis and NSC accumulation. NSC accumulation decreased the maximum photosynthetic capacity and delayed photosynthetic induction in both species. In G. max, such photosynthetic downregulation was explained by coordinated downregulation of photosynthetic genes involved in the Calvin cycle, Rubisco activase, photochemical reactions, and stomatal opening. Furthermore, sink-source imbalance may have triggered a change in the balance of sugar-phosphate translocators in chloroplast membranes, which may have promoted starch accumulation in chloroplasts. Our findings provide an overall picture of photosynthetic downregulation and NSC accumulation in G. max, demonstrating that photosynthetic downregulation is triggered by NSC accumulation and cannot be explained solely by N deficiency.
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Affiliation(s)
- Yui Ozawa
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Aiko Tanaka
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Takamasa Suzuki
- College of Bioscience and Biotechnology, Chubu University, Kasugai, Aichi, Japan
| | - Daisuke Sugiura
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
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da Silva Ribeiro JE, dos Santos Coêlho E, de Oliveira AKS, Correia da Silva AG, de Araújo Rangel Lopes W, de Almeida Oliveira PH, Freire da Silva E, Barros Júnior AP, Maria da Silveira L. Artificial neural network approach for predicting the sesame ( Sesamum indicum L.) leaf area: A non-destructive and accurate method. Heliyon 2023; 9:e17834. [PMID: 37501953 PMCID: PMC10368775 DOI: 10.1016/j.heliyon.2023.e17834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 06/21/2023] [Accepted: 06/28/2023] [Indexed: 07/29/2023] Open
Abstract
The estimative of the leaf area using a nondestructive method is paramount for successive evaluations in the same plant with precision and speed, not requiring high-cost equipment. Thus, the objective of this work was to construct models to estimate leaf area using artificial neural network models (ANN) and regression and to compare which model is the most effective model for predicting leaf area in sesame culture. A total of 11,000 leaves of four sesame cultivars were collected. Then, the length (L) and leaf width (W), and the actual leaf area (LA) were quantified. For the ANN model, the parameters of the length and width of the leaf were used as input variables of the network, with hidden layers and leaf area as the desired output parameter. For the linear regression models, leaf dimensions were considered independent variables, and the actual leaf area was the dependent variable. The criteria for choosing the best models were: the lowest root of the mean squared error (RMSE), mean absolute error (MAE), and absolute mean percentage error (MAPE), and higher coefficients of determination (R2). Among the linear regression models, the equation yˆ=0.515+0.584*LW was considered the most indicated to estimate the leaf area of the sesame. In modeling with ANNs, the best results were found for model 2-3-1, with two input variables (L and W), three hidden variables, and an output variable (LA). The ANN model was more accurate than the regression models, recording the lowest errors and higher R2 in the training phase (RMSE: 0.0040; MAE: 0.0027; MAPE: 0.0587; and R2: 0.9834) and in the test phase (RMSE: 0.0106; MAE: 0.0029; MAPE: 0.0611; and R2: 0.9828). Thus, the ANN method is the most indicated and accurate for predicting the leaf area of the sesame.
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Zhang NN, Suo BY, Yao LL, Ding YX, Zhang JH, Wei GH, Shangguan ZP, Chen J. H 2 S works synergistically with rhizobia to modify photosynthetic carbon assimilation and metabolism in nitrogen-deficient soybeans. PLANT, CELL & ENVIRONMENT 2023. [PMID: 37303272 DOI: 10.1111/pce.14643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Revised: 05/28/2023] [Accepted: 05/30/2023] [Indexed: 06/13/2023]
Abstract
Hydrogen sulfide (H2 S) performs a crucial role in plant development and abiotic stress responses by interacting with other signalling molecules. However, the synergistic involvement of H2 S and rhizobia in photosynthetic carbon (C) metabolism in soybean (Glycine max) under nitrogen (N) deficiency has been largely overlooked. Therefore, we scrutinised how H2 S drives photosynthetic C fixation, utilisation, and accumulation in soybean-rhizobia symbiotic systems. When soybeans encountered N deficiency, organ growth, grain output, and nodule N-fixation performance were considerably improved owing to H2 S and rhizobia. Furthermore, H2 S collaborated with rhizobia to actively govern assimilation product generation and transport, modulating C allocation, utilisation, and accumulation. Additionally, H2 S and rhizobia profoundly affected critical enzyme activities and coding gene expressions implicated in C fixation, transport, and metabolism. Furthermore, we observed substantial effects of H2 S and rhizobia on primary metabolism and C-N coupled metabolic networks in essential organs via C metabolic regulation. Consequently, H2 S synergy with rhizobia inspired complex primary metabolism and C-N coupled metabolic pathways by directing the expression of key enzymes and related coding genes involved in C metabolism, stimulating effective C fixation, transport, and distribution, and ultimately improving N fixation, growth, and grain yield in soybeans.
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Affiliation(s)
- Ni-Na Zhang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, China
| | - Bing-Yu Suo
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Science, Northwest A&F University, Yangling, Shaanxi, China
| | - Lin-Lin Yao
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi, China
| | - Yu-Xin Ding
- College of Natural Resources and Environment, Northwest A&F University, Yangling, Shaanxi, China
| | - Jian-Hua Zhang
- Department of Biology, Hong Kong Baptist University, Hong Kong, China
| | - Ge-Hong Wei
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Science, Northwest A&F University, Yangling, Shaanxi, China
| | - Zhou-Ping Shangguan
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, China
| | - Juan Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Science, Northwest A&F University, Yangling, Shaanxi, China
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Ninkuu V, Liu Z, Sun X. Genetic regulation of nitrogen use efficiency in Gossypium spp. PLANT, CELL & ENVIRONMENT 2023; 46:1749-1773. [PMID: 36942358 DOI: 10.1111/pce.14586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 03/17/2023] [Accepted: 03/20/2023] [Indexed: 05/04/2023]
Abstract
Cotton (Gossypium spp.) is the most important fibre crop, with desirable characteristics preferred for textile production. Cotton fibre output relies heavily on nitrate as the most important source of inorganic nitrogen (N). However, nitrogen dynamics in extreme environments limit plant growth and lead to yield loss and pollution. Therefore, nitrogen use efficiency (NUE), which involves the utilisation of the 'right rate', 'right source', 'right time', and 'right place' (4Rs), is key for efficient N management. Recent omics techniques have genetically improved NUE in crops. We herein highlight the mechanisms of N uptake and assimilation in the vegetative and reproductive branches of the cotton plant while considering the known and unknown regulatory factors. The phylogenetic relationships among N transporters in four Gossypium spp. have been reviewed. Further, the N regulatory genes that participate in xylem transport and phloem loading are also discussed. In addition, the functions of microRNAs and transcription factors in modulating the expression of target N regulatory genes are highlighted. Overall, this review provides a detailed perspective on the complex N regulatory mechanism in cotton, which would accelerate the research toward improving NUE in crops.
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Affiliation(s)
- Vincent Ninkuu
- State Key Laboratory of Cotton Biology, State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Zhixin Liu
- State Key Laboratory of Cotton Biology, State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Xuwu Sun
- State Key Laboratory of Cotton Biology, State Key Laboratory of Crop Stress Adaptation and Improvement, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
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14
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Wang Z, Wang C. Interactive effects of elevated temperature and drought on plant carbon metabolism: A meta-analysis. GLOBAL CHANGE BIOLOGY 2023; 29:2824-2835. [PMID: 36794475 DOI: 10.1111/gcb.16639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Accepted: 01/18/2023] [Indexed: 05/31/2023]
Abstract
Elevated temperature (Te ) and drought often co-occur and interactively affect plant carbon (C) metabolism and thus the ecosystem C cycling; however, the magnitude of their interaction is unclear, making the projection of global change impacts challenging. Here, we compiled 107 journal articles in which temperature and water availability were jointly manipulated, and we performed a meta-analysis of interactive effects of Te and drought on leaf photosynthesis (Agrowth ) and respiration (Rgrowth ) at growth temperature, nonstructural carbohydrates and biomass of plants, and their dependencies on experimental and biological moderators (e.g., treatment intensity, plant functional type). Our results showed that, overall, there was no significant interaction of Te and drought on Agrowth . Te accelerated Rgrowth under well-watered conditions rather than under drought conditions. The Te × drought interaction on leaf soluble sugar and starch concentrations were neutral and negative, respectively. The effect of Te and drought on plant biomass displayed a negative interaction, with Te deteriorating the drought impacts. Drought induced an increase in root to shoot ratio at ambient temperature but not at Te . The magnitudes of Te and drought negatively modulated the Te × drought interactions on Agrowth . Root biomass of woody plants was more vulnerable to drought than that of herbaceous plants at ambient temperature, but this difference diminished at Te . Perennial herbs exhibited a stronger amplifying effect of Te on plant biomass in response to drought than did annual herbs. Te exacerbated the responses of Agrowth and stomatal conductance to drought for evergreen broadleaf trees rather than for deciduous broadleaf and evergreen coniferous trees. A negative Te × drought interaction on plant biomass was observed on species-level rather than on community-level. Collectively, our findings provide a mechanistic understanding of the interactive effects of Te and drought on plant C metabolism, which would improve the prediction of climate change impacts.
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Affiliation(s)
- Zhaoguo Wang
- Center for Ecological Research, Northeast Forestry University, Harbin, China
- Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China
| | - Chuankuan Wang
- Center for Ecological Research, Northeast Forestry University, Harbin, China
- Key Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, Northeast Forestry University, Harbin, China
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Zhou M, Sun Y, Wang S, Liu Q, Li H. Photosynthesis Product Allocation and Yield in Sweet Potato in Response to Different Late-Season Irrigation Levels. PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12091780. [PMID: 37176838 PMCID: PMC10180913 DOI: 10.3390/plants12091780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Revised: 04/21/2023] [Accepted: 04/23/2023] [Indexed: 05/15/2023]
Abstract
Soil water deficit is an important factor affecting the source-sink balance of sweet potato during its late-season growth, but water regulation during this period has not been well studied. Therefore, the aim of this study was to determine the appropriate irrigation level in late-season sweet potato, and the effect of irrigation level on accumulation and allocation of photosynthetic products. In this study, two yield-based field trials (2021-2022) were conducted in which five late-season irrigation levels set according to the crop evapotranspiration rate were tested (T0: non-irrigation, T1: 33% ETc, T2: 75% ETc, T3: 100% ETc, T4: 125% ETc). The effects of the different irrigation levels on photosynthetic physiological indexes, 13C transfer allocation, water use efficiency (WUE), water productivity (WP), and the yield and economic benefit of sweet potato were studied. The results showed that late-season irrigation significantly increased the total chlorophyll content and net photosynthetic rate of functional leaves, in addition to promoting the accumulation of above-ground-source organic biomass (p < 0.05). The rate of 13C allocation, maximum accumulation rate (Vmax), and average accumulation rate (Vmean) of dry matter in storage root were significantly higher under T2 irrigation than under the other treatments (p < 0.05). This suggests that both non-irrigation (T0) and over-irrigation (T4) were not conducive to the transfer and allocation of photosynthetic products to storage roots in late-season sweet potato. However, moderate irrigation (T2) effectively promoted the source-sink balance, enhanced the source photosynthetic rate and stimulated the sink activity, such that more photosynthate was allocated to the storage sink. The results also showed that T2 irrigation treatments significantly increased yield, WUE and WP compared to T0 and T4 (p < 0.05), suggesting that moderate irrigation (T2) can significantly promote the potential of storage root production and field productivity. There was a close relationship between economic benefit and marketable sweet potato yield, and both were highest under T2 (p < 0.05), increasing by 36.1% and 59.9% compared with T0 over the two-year study period. In conclusion, irrigation of late-season sweet potato with 75% evapotranspiration (T2) can improve both the yield and production potential. Together, these results support the use of late-season water management in the production of sweet potato.
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Affiliation(s)
- Mingjing Zhou
- College of Resources and Environmental Sciences, Qingdao Agricultural University, Qingdao 266109, China
| | - Yiming Sun
- College of Resources and Environmental Sciences, Qingdao Agricultural University, Qingdao 266109, China
| | - Shaoxia Wang
- College of Resources and Environmental Sciences, Qingdao Agricultural University, Qingdao 266109, China
| | - Qing Liu
- College of Resources and Environmental Sciences, Qingdao Agricultural University, Qingdao 266109, China
| | - Huan Li
- College of Resources and Environmental Sciences, Qingdao Agricultural University, Qingdao 266109, China
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Du CL, Cai CL, Lu Y, Li YM, Xie ZS. Identification and expression analysis of invertase family genes during grape (Vitis vinifera L.) berry development under CPPU and GA treatment. Mol Genet Genomics 2023; 298:777-789. [PMID: 37041390 DOI: 10.1007/s00438-023-02015-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Accepted: 03/28/2023] [Indexed: 04/13/2023]
Abstract
Sugar is crucial for grape berry, whether used for fresh food or wine. However, berry enlargement treatment with forchlorfenuron (N-(2-chloro4-pyridyl)-N'-phenylurea) (CPPU, a synthetic cytokinin) and gibberellin (GA) always had adverse effects on sugar accumulation in some grape varieties, especially CPPU. Therefore exploring the molecular mechanisms behind these adverse effects could provide a foundation for improving or developing technology to mitigate the effects of CPPU/GA treatments for grape growers. In the present study, invertase (INV) family, the key gene controlling sugar accumulation, was identified and characterized on the latest annotated grape genome. Their express pattern, as well as invertase activity and sugar content, were analyzed during grape berry development under CPPU and GA3 treatment to explore the potential role of INV members under berry enlargement treatment in grapes. Eighteen INV genes were identified and divided into two sub-families: 10 neutral INV genes (Vv-A/N-INV1-10) and 8 acid INV genes containing 5 CWINV (VvCWINV1-5) and 3 VIN (VvVIN1-3). At the early development stage, both CPPU and GA3 treatment decreased the hexose level in berries of 'Pinot Noir' grape, whereas the activity of three types inverstase (soluble acid INV, insoluble acid INV, and neutral INV) increased. Correspondingly, most of INV members were up-regulated by GA3 /CPPU application at least one sampling time point during early berry development, including VvCWINV1, 2, 3, 4, 5, VvVIN1, 2, 3 and Vv-A/N-INV1, 2, 5, 6, 7, 8, 10. At maturity, the sugar content in CPPU-treated berries is still lower than that in the control. Soluble acid INV and neutral INV, rather than insoluble acid INV, presented lower activity in CPPU-treated berries. Meanwhile, several corresponding genes, such as VvVIN2 and Vv-A/N-INV2, 8, 10 in ripening berries were obviously down-regulated by CPPU treatment. These results suggested that most of INV members could be triggered by berry enlargement treatment during early berry development, whereas VvVINs and Vv-A/N-INVs, but not VvCWINVs, could be the limiting factor resulting in decreased sugar accumulation in CPPU-treated berries at maturity. In conclusion, this study identified the INV family on the latest annotated grape genome and selected several potential members involving in the limit of CPPU on final sugar accumulation in grape berry. These results provide candidate genes for further study of the molecular regulation of CPPU and GA on sugar accumulation in grape.
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Affiliation(s)
- Chen-Lu Du
- College of Horticulture and Landscape, Yangzhou University, Yangzhou, China
| | - Chun-Liu Cai
- College of Horticulture and Landscape, Yangzhou University, Yangzhou, China
| | - Yi Lu
- College of Horticulture and Landscape, Yangzhou University, Yangzhou, China
| | - You-Mei Li
- College of Horticulture and Landscape, Yangzhou University, Yangzhou, China.
| | - Zhao-Sen Xie
- College of Horticulture and Landscape, Yangzhou University, Yangzhou, China.
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Wu X, Tong L, Kang S, Du T, Ding R, Li S, Chen Y. Combination of suitable planting density and nitrogen rate for high yield maize and their source-sink relationship in Northwest China. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023. [PMID: 37016583 DOI: 10.1002/jsfa.12602] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2022] [Revised: 03/26/2023] [Accepted: 04/05/2023] [Indexed: 06/19/2023]
Abstract
BACKGROUND Increasing crop yield per unit area by increasing planting density is essential to ensure food security. However, the optimal combination of planting density and nitrogen (N) application for high-yielding maize and its source-sink characteristics need to be more clearly understood. RESULTS A 2-year field experiment was conducted combining three planting densities (D1: 70 000 plants ha-1 ; D2: 100 000 plants ha-1 ; D3: 130 000 plants ha-1 ) and three nitrogen rates (N1: 150 kg hm-2 ; N2: 350 kg hm-2 ; N3: 450 kg hm-2 ). The results showed that increasing planting density significantly increased leaf area index and grain yield but negatively affected ear traits. The Richards model was used to fit the dynamic changes of dry matter accumulation of maize under different treatments, and the fitting results were good. Increasing planting density increased population yield while limiting the development of individual plants, bringing the period of rapid dry matter accumulation to an early end and accelerating leaf senescence. An appropriate nitrogen rate could prolong the period of rapid accumulation of dry matter in maize, and increase the 100-kernel weight. Increasing planting density enhanced post-silking dry matter accumulation to a lesser extent, and the source-sink relationship of the maize population gradually developed from sink limitation to source limitation with increasing planting density. CONCLUSION The decrease in yield due to the insufficient source strength to meet the sink demand at too high densities was the reason that limited further improvement of the optimal planting density. An appropriate nitrogen rate facilitated the realization of yield potential at high density. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Xuanyi Wu
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
| | - Ling Tong
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
| | - Shaozhong Kang
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
| | - Taisheng Du
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
| | - Risheng Ding
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
| | - Sien Li
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
| | - Yang Chen
- Center for Agricultural Water Research in China, College of Water Resources and Civil Engineering, China Agricultural University, Beijing, China
- National Field Scientific Observation and Research Station on Efficient Water Use of Oasis Agriculture in Wuwei of Gansu Province, Wuwei, China
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18
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Qin A, Aluko OO, Liu Z, Yang J, Hu M, Guan L, Sun X. Improved cotton yield: Can we achieve this goal by regulating the coordination of source and sink? FRONTIERS IN PLANT SCIENCE 2023; 14:1136636. [PMID: 37063185 PMCID: PMC10090392 DOI: 10.3389/fpls.2023.1136636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Accepted: 03/06/2023] [Indexed: 06/19/2023]
Abstract
Cotton is one of the major cash crops globally. It is characterized by determinate growth and multiple fruiting, which makes the source-sink contradiction more obvious. Coordination between source and sink is crucial for normal growth, yield, and quality of cotton. Numerous studies reported how the assimilate transport and distribution under varying environmental cues affected crop yields. However, less is known about the functional mechanism underlying the assimilate transport between source and sink, and how their distribution impacts cotton growth. Here, we provided an overview of the assimilate transport and distribution mechanisms , and discussed the regulatory mechanisms involved in source-sink balance in relation to cotton yield. Therefore, this review enriched our knowledge of the regulatory mechanism involved in source-sink relationship for improved cotton yield.
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19
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Jäkel AC, Heymann M, Simmel FC. Multiscale Biofabrication: Integrating Additive Manufacturing with DNA-Programmable Self-Assembly. Adv Biol (Weinh) 2023; 7:e2200195. [PMID: 36328598 DOI: 10.1002/adbi.202200195] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 09/23/2022] [Indexed: 11/06/2022]
Abstract
Structure and hierarchical organization are crucial elements of biological systems and are likely required when engineering synthetic biomaterials with life-like behavior. In this context, additive manufacturing techniques like bioprinting have become increasingly popular. However, 3D bioprinting, as well as other additive manufacturing techniques, show limited resolution, making it difficult to yield structures on the sub-cellular level. To be able to form macroscopic synthetic biological objects with structuring on this level, manufacturing techniques have to be used in conjunction with biomolecular nanotechnology. Here, a short overview of both topics and a survey of recent advances to combine additive manufacturing with microfabrication techniques and bottom-up self-assembly involving DNA, are given.
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Affiliation(s)
- Anna C Jäkel
- School of Natural Sciences, Department of Bioscience, Technical University Munich, Am Coulombwall 4a, 85748, Garching b. München, Germany
| | - Michael Heymann
- Institute of Biomaterials and Biomolecular Systems, University of Stuttgart, Pfaffenwaldring 57, 70569, Stuttgart, Germany
| | - Friedrich C Simmel
- School of Natural Sciences, Department of Bioscience, Technical University Munich, Am Coulombwall 4a, 85748, Garching b. München, Germany
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Aguirrebengoa M, Müller C, Hambäck PA, González-Megías A. Density-Dependent Effects of Simultaneous Root and Floral Herbivory on Plant Fitness and Defense. PLANTS (BASEL, SWITZERLAND) 2023; 12:283. [PMID: 36678999 PMCID: PMC9867048 DOI: 10.3390/plants12020283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Revised: 12/23/2022] [Accepted: 01/03/2023] [Indexed: 06/17/2023]
Abstract
Plants are attacked by multiple herbivores, and depend on a precise regulation of responses to cope with a wide range of antagonists. Simultaneous herbivory can occur in different plant compartments, which may pose a serious threat to plant growth and reproduction. In particular, plants often face co-occurring root and floral herbivory, but few studies have focused on such interactions. Here, we investigated in the field the combined density-dependent effects of root-chewing cebrionid beetle larvae and flower-chewing pierid caterpillars on the fitness and defense of a semiarid Brassicaceae herb. We found that the fitness impact of both herbivore groups was independent and density-dependent. Increasing root herbivore density non-significantly reduced plant fitness, while the relationship between increasing floral herbivore density and the reduction they caused in both seed number and seedling emergence was non-linear. The plant defensive response was non-additive with regard to the different densities of root and floral herbivores; high floral herbivore density provoked compensatory investment in reproduction, and this tolerance response was combined with aboveground chemical defense induction when also root herbivore density was high. Plants may thus prioritize specific trait combinations in response to varying combined below- and aboveground herbivore densities to minimize negative impacts on fitness.
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Affiliation(s)
| | - Caroline Müller
- Department of Chemical Ecology, Bielefeld University, 33615 Bielefeld, Germany
| | - Peter A. Hambäck
- Department of Ecology, Environment and Plant Sciences, Stockholm University, 106 91 Stockholm, Sweden
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21
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Murchie EH, Reynolds M, Slafer GA, Foulkes MJ, Acevedo-Siaca L, McAusland L, Sharwood R, Griffiths S, Flavell RB, Gwyn J, Sawkins M, Carmo-Silva E. A 'wiring diagram' for source strength traits impacting wheat yield potential. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:72-90. [PMID: 36264277 PMCID: PMC9786870 DOI: 10.1093/jxb/erac415] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 10/18/2022] [Indexed: 05/06/2023]
Abstract
Source traits are currently of great interest for the enhancement of yield potential; for example, much effort is being expended to find ways of modifying photosynthesis. However, photosynthesis is but one component of crop regulation, so sink activities and the coordination of diverse processes throughout the crop must be considered in an integrated, systems approach. A set of 'wiring diagrams' has been devised as a visual tool to integrate the interactions of component processes at different stages of wheat development. They enable the roles of chloroplast, leaf, and whole-canopy processes to be seen in the context of sink development and crop growth as a whole. In this review, we dissect source traits both anatomically (foliar and non-foliar) and temporally (pre- and post-anthesis), and consider the evidence for their regulation at local and whole-plant/crop levels. We consider how the formation of a canopy creates challenges (self-occlusion) and opportunities (dynamic photosynthesis) for components of photosynthesis. Lastly, we discuss the regulation of source activity by feedback regulation. The review is written in the framework of the wiring diagrams which, as integrated descriptors of traits underpinning grain yield, are designed to provide a potential workspace for breeders and other crop scientists that, along with high-throughput and precision phenotyping data, genetics, and bioinformatics, will help build future dynamic models of trait and gene interactions to achieve yield gains in wheat and other field crops.
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Affiliation(s)
| | - Matthew Reynolds
- International Maize and Wheat Improvement Center (CIMMYT), Km. 45, Carretera Mexico-Veracruz, El Batan, Texcoco, Mexico
| | - Gustavo A Slafer
- Department of Crop and Forest Sciences, University of Lleida–AGROTECNIO-CERCA Center, Av. R. Roure 191, 25198 Lleida, Spain
- ICREA (Catalonian Institution for Research and Advanced Studies), Barcelona, Spain
| | - M John Foulkes
- Division of Plant and Crop Science, School of Biosciences, University of Nottingham, Sutton Bonington LE12 5RD, UK
| | - Liana Acevedo-Siaca
- International Maize and Wheat Improvement Center (CIMMYT), Km. 45, Carretera Mexico-Veracruz, El Batan, Texcoco, Mexico
| | - Lorna McAusland
- Division of Plant and Crop Science, School of Biosciences, University of Nottingham, Sutton Bonington LE12 5RD, UK
| | - Robert Sharwood
- Hawkesbury Institute for the Environment, Western Sydney University, Richmond NSW 2753, Australia
| | - Simon Griffiths
- John Innes Centre, Norwich Research Park, Colney Ln, Norwich NR4 7UH, UK
| | - Richard B Flavell
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Jeff Gwyn
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Mark Sawkins
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
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Kumar A, Pandey SS, Kumar D, Tripathi BN. Genetic manipulation of photosynthesis to enhance crop productivity under changing environmental conditions. PHOTOSYNTHESIS RESEARCH 2023; 155:1-21. [PMID: 36319887 DOI: 10.1007/s11120-022-00977-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Accepted: 10/14/2022] [Indexed: 06/16/2023]
Abstract
Current global agricultural production needs to be increased to feed the unconstrained growing population. The changing climatic condition due to anthropogenic activities also makes the conditions more challenging to meet the required crop productivity in the future. The increase in crop productivity in the post green revolution era most likely became stagnant, or no major enhancement in crop productivity observed. In this review article, we discuss the emerging approaches for the enhancement of crop production along with dealing to the future climate changes like rise in temperature, increase in precipitation and decrease in snow and ice level, etc. At first, we discuss the efforts made for the genetic manipulation of chlorophyll metabolism, antenna engineering, electron transport chain, carbon fixation, and photorespiratory processes to enhance the photosynthesis of plants and to develop tolerance in plants to cope with changing environmental conditions. The application of CRISPR to enhance the crop productivity and develop abiotic stress-tolerant plants to face the current changing climatic conditions is also discussed.
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Affiliation(s)
- Abhishek Kumar
- Biotechnology Division, Council of Scientific and Industrial Research (CSIR)-Institute of Himalayan Bioresource Technology, Palampur, 176061, India
| | - Shiv Shanker Pandey
- Biotechnology Division, Council of Scientific and Industrial Research (CSIR)-Institute of Himalayan Bioresource Technology, Palampur, 176061, India.
| | - Dhananjay Kumar
- Laboratory of Algal Biotechnology, Department of Botany and Microbiology, School of Life Sciences, H.N.B. Garhwal University, Srinagar, Garhwal, 246 174, India.
| | - Bhumi Nath Tripathi
- Department of Biotechnology, Indira Gandhi National Tribal University, Amarkantak, 484886, India
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23
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Slafer GA, Foulkes MJ, Reynolds MP, Murchie EH, Carmo-Silva E, Flavell R, Gwyn J, Sawkins M, Griffiths S. A 'wiring diagram' for sink strength traits impacting wheat yield potential. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:40-71. [PMID: 36334052 PMCID: PMC9786893 DOI: 10.1093/jxb/erac410] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 11/04/2022] [Indexed: 05/17/2023]
Abstract
Identifying traits for improving sink strength is a bottleneck to increasing wheat yield. The interacting processes determining sink strength and yield potential are reviewed and visualized in a set of 'wiring diagrams', covering critical phases of development (and summarizing known underlying genetics). Using this framework, we reviewed and assembled the main traits determining sink strength and identified research gaps and potential hypotheses to be tested for achieving gains in sink strength. In pre-anthesis, grain number could be increased through: (i) enhanced spike growth associated with optimized floret development and/or a reduction in specific stem-internode lengths and (ii) improved fruiting efficiency through an accelerated rate of floret development, improved partitioning between spikes, or optimized spike cytokinin levels. In post-anthesis, grain, sink strength could be augmented through manipulation of grain size potential via ovary size and/or endosperm cell division and expansion. Prospects for improving spike vascular architecture to support all rapidly growing florets, enabling the improved flow of assimilate, are also discussed. Finally, we considered the prospects for enhancing grain weight realization in relation to genetic variation in stay-green traits as well as stem carbohydrate remobilization. The wiring diagrams provide a potential workspace for breeders and crop scientists to achieve yield gains in wheat and other field crops.
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Affiliation(s)
| | | | - Matthew P Reynolds
- International Maize and Wheat Improvement Center (CIMMYT), Km. 45, Carretera Mexico, El Batan, Texcoco, Mexico
| | - Erik H Murchie
- Plant and Crop Sciences, School of Biosciences, University of Nottingham, Leicestershire LE12 5RD, UK
| | | | - Richard Flavell
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Jeff Gwyn
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Mark Sawkins
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Simon Griffiths
- John Innes Centre, Norwich Research Park, Colney Ln, Norwich NR4 7UH, UK
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24
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Viaud G, Chen Y, Cournède PH. Full Bayesian inference in hidden Markov models of plant growth. Ann Appl Stat 2022. [DOI: 10.1214/21-aoas1594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Affiliation(s)
- Gautier Viaud
- Université Paris-Saclay, CentraleSupélec, Mathématiques et Informatique pour la Complexité et les Systèmes
| | - Yuting Chen
- Energy Analysis and Environmental Impacts Division, Lawrence Berkeley National Laboratory
| | - Paul-Henry Cournède
- Université Paris-Saclay, CentraleSupélec, Mathématiques et Informatique pour la Complexité et les Systèmes
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25
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Nam H, Gupta A, Nam H, Lee S, Cho HS, Park C, Park S, Park SJ, Hwang I. JULGI-mediated increment in phloem transport capacity relates to fruit yield in tomato. PLANT BIOTECHNOLOGY JOURNAL 2022; 20:1533-1545. [PMID: 35478430 PMCID: PMC9342617 DOI: 10.1111/pbi.13831] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 04/19/2022] [Accepted: 04/21/2022] [Indexed: 06/14/2023]
Abstract
The continuous growth of the global population and the increase in the amount of arid land has severely constrained agricultural crop production. To solve this problem, many researchers have attempted to increase productivity through the efficient distribution of energy; however, the direct relationship between the plant vasculature, specifically phloem development, and crop yield is not well established. Here, we demonstrate that an optimum increase in phloem-transportation capacity by reducing SIJUL expression leads to improved sink strength in tomato (Solanum lycopersicum L.). SIJUL, a negative regulator of phloem development, suppresses the translation of a positive regulator of phloem development, SlSMXL5. The suppression of SlJUL increases the number of phloem cells and sucrose transport, but only an optimal reduction of SlJUL function greatly enhances sink strength in tomato, improving fruit setting, and yield contents by 37% and 60%, respectively. We show that the increment in phloem cell number confers spare transport capacity. Our results suggest that the control of phloem-transport capacity within the threshold could enhance the commitment of photosynthates to instigate yield improvement.
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Affiliation(s)
- Hoyoung Nam
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Aarti Gupta
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Heejae Nam
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Seungchul Lee
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Hyun Seob Cho
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Chanyoung Park
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Soyoung Park
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Soon Ju Park
- Division of Biological Sciences and Research Institute for Basic ScienceWonkwang UniversityIksanKorea
| | - Ildoo Hwang
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
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26
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Lima AF, Bernal J, Venâncio MGS, de Souza BHS, Carvalho GA. Comparative Tolerance Levels of Maize Landraces and a Hybrid to Natural Infestation of Fall Armyworm. INSECTS 2022; 13:insects13070651. [PMID: 35886827 PMCID: PMC9316814 DOI: 10.3390/insects13070651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 06/28/2022] [Accepted: 07/16/2022] [Indexed: 02/04/2023]
Abstract
Simple Summary Exploiting the tolerance of plants against herbivorous insects is a viable pest management alternative, especially where conventional controls are ineffective. For example, due to the inefficacy of currently adopted practices, new strategies and methods are needed for Spodoptera frugiperda management in maize. This study evaluated the tolerance levels of maize landraces and a conventional hybrid under natural infestation of S. frugiperda. We found promising sources of tolerance among the landraces, evident as tolerance indices that varied across the landraces and hybrid we evaluated. Abstract Insect pests such as Spodoptera frugiperda cause significant losses to maize (Zea mays mays). Control of S. frugiperda is difficult, but the use of insect resistant cultivars, including tolerant cultivars, is a promising alternative, and landraces are a potential source of insect resistance. This study investigated tolerance to S. frugiperda in five Brazilian landraces, Amarelão, Aztequinha, Branco Antigo, Palha Roxa, and São Pedro, in relation to one conventional (non-Bt) hybrid, BM207, under field conditions. We assessed tolerance as the ratio of insecticide-free to insecticide-protected plants for plant height, stem diameter, and leaf chlorophyll content at two plant stages. Tolerance ratios varied across the maize genotypes, but inconsistently across plant variables, and cluster analysis revealed three groups based on tolerance ratios. A first group contained genotypes similarly tolerant to S. frugiperda, BM207, Palha Roxa, São Pedro, and Aztequinha, while the second and third groups each contained single genotypes, Amarelão, and Branco Antigo, which were considered not tolerant. Overall, the landraces Palha Roxa, São Pedro, and Aztequinha compared favorably to BM207 in terms of tolerance, and therefore may be valuable for management of this pest, and as germplasm sources to improve tolerance in other cultivars.
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Affiliation(s)
- Andreísa Fabri Lima
- Department of Entomology, Lavras Federal University (UFLA), Lavras 37200-900, MG, Brazil; (A.F.L.); (M.G.S.V.); (G.A.C.)
| | - Julio Bernal
- Department of Entomology, Texas A&M University, College Station, TX 77840, USA
- Correspondence: (J.B.); (B.H.S.d.S.)
| | - Maria Gabriela Silva Venâncio
- Department of Entomology, Lavras Federal University (UFLA), Lavras 37200-900, MG, Brazil; (A.F.L.); (M.G.S.V.); (G.A.C.)
| | - Bruno Henrique Sardinha de Souza
- Department of Entomology, Lavras Federal University (UFLA), Lavras 37200-900, MG, Brazil; (A.F.L.); (M.G.S.V.); (G.A.C.)
- Correspondence: (J.B.); (B.H.S.d.S.)
| | - Geraldo Andrade Carvalho
- Department of Entomology, Lavras Federal University (UFLA), Lavras 37200-900, MG, Brazil; (A.F.L.); (M.G.S.V.); (G.A.C.)
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27
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Niu Y, Chen T, Zheng Z, Zhao C, Liu C, Jia J, Zhou M. A new major QTL for flag leaf thickness in barley (Hordeum vulgare L.). BMC PLANT BIOLOGY 2022; 22:305. [PMID: 35751018 PMCID: PMC9229122 DOI: 10.1186/s12870-022-03694-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Accepted: 06/14/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND Carbohydrate accumulation of photosynthetic organs, mainly leaves, are the primary sources of grain yield in cereals. The flag leaf plays a vital role in seed development, which is probably the most neglected morphological characteristic during traditional selection processes. RESULTS In this experiment, four flag leaf morphological traits and seven yield-related traits were investigated in a DH population derived from a cross between a wild barley and an Australian malting barley cultivar. Flag leaf thickness (FLT) showed significantly positive correlations with grain size. Four QTL, located on chromosomes 1H, 2H, 3H, and 5H, respectively, were identified for FLT. Among them, a major QTL was located on chromosome 3H with a LOD value of 18.4 and determined 32% of the phenotypic variation. This QTL showed close links but not pleiotropism to the previously reported semi-dwarf gene sdw1 from the cultivated barley. This QTL was not reported before and the thick leaf allele from the wild barley could provide a useful source for improving grain yield through breeding. CONCLUSIONS Our results also provided valuable evidence that source traits and sink traits in barley are tightly connected and suggest further improvement of barley yield potential with enhanced and balanced source and sink relationships by exploiting potentialities of the wild barley resources. Moreover, this study will provide a novel sight on understanding the evolution and development of leaf morphology in barley and improving barley production by rewilding for lost superior traits during plant evolution.
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Affiliation(s)
- Yanan Niu
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 1375, 7250, Prospect, TAS, Australia
| | - Tianxiao Chen
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 1375, 7250, Prospect, TAS, Australia
| | - Zhi Zheng
- CSIRO Agriculture and Food, 4067, St Lucia, QLD, Australia
| | - Chenchen Zhao
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 1375, 7250, Prospect, TAS, Australia
| | - Chunji Liu
- CSIRO Agriculture and Food, 4067, St Lucia, QLD, Australia
| | - Jizeng Jia
- National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, 100081, Beijing, China.
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 1375, 7250, Prospect, TAS, Australia.
- College of Agronomy, Shanxi Agricultural University, 030801, Taigu, China.
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28
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Asim M, Hussain Q, Wang X, Sun Y, Liu H, Khan R, Du S, Shi Y, Zhang Y. Mathematical Modeling Reveals That Sucrose Regulates Leaf Senescence via Dynamic Sugar Signaling Pathways. Int J Mol Sci 2022; 23:ijms23126498. [PMID: 35742940 PMCID: PMC9223756 DOI: 10.3390/ijms23126498] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2022] [Revised: 05/30/2022] [Accepted: 06/07/2022] [Indexed: 12/17/2022] Open
Abstract
Sucrose (Suc) accumulation is one of the key indicators of leaf senescence onset, but little is known about its regulatory role. Here, we found that application of high (120–150 mM) and low levels (60 mM) of Suc to young leaf (YL) and fully expanded leaf (FEL) discs, respectively, decreased chlorophyll content and maximum photosynthetic efficiency. Electrolyte leakage and malondialdehyde levels increased at high Suc concentrations (90–120 mM in YL and 60 and 150 mM in FEL discs). In FEL discs, the senescence-associated gene NtSAG12 showed a gradual increase in expression with increased Suc application; in contrast, in YL discs, NtSAG12 was upregulated with low Suc treatment (60 mM) but downregulated at higher levels of Suc. In YL discs, trehalose-6-phosphate (T6P) accumulated at a low half-maximal effective concentration (EC50) of Suc (1.765 mM). However, T6P levels declined as trehalose 6 phosphate synthase (TPS) content decreased, resulting in the maximum velocity of sucrose non-fermenting-1-related protein kinase (SnRK) and hexokinase (HXK) occurring at higher level of Suc. We therefore speculated that senescence was induced by hexose accumulation. In FEL discs, the EC50 of T6P occurred at a low concentration of Suc (0.9488 mM); T6P levels progressively increased with higher TPS content, which inhibited SnRK activity with a dissociation constant (Kd) of 0.001475 U/g. This confirmed that the T6P–SnRK complex induced senescence in detached FEL discs.
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Affiliation(s)
- Muhammad Asim
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
| | - Quaid Hussain
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, 666 Wusu Street, Hangzhou 311300, China;
| | - Xiaolin Wang
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
| | - Yanguo Sun
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
| | - Haiwei Liu
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
| | - Rayyan Khan
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
| | - Shasha Du
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
| | - Yi Shi
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
- Correspondence: (Y.S.); (Y.Z.)
| | - Yan Zhang
- Key Laboratory of Tobacco Biology and Processing, Ministry of Agriculture and Rural Affairs, Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao 266101, China; (M.A.); (X.W.); (Y.S.); (H.L.); (R.K.); (S.D.)
- Graduate School of Chinese Academy of Agricultural Science, Beijing 100081, China
- Correspondence: (Y.S.); (Y.Z.)
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29
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Merchant A, Smith MR, Windt CW. In situ pod growth rate reveals contrasting diurnal sensitivity to water deficit in Phaseolus vulgaris. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:3774-3786. [PMID: 35323925 PMCID: PMC9162186 DOI: 10.1093/jxb/erac097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Accepted: 03/22/2022] [Indexed: 06/14/2023]
Abstract
The development of reproductive tissues determines plant fecundity and yield. Loading of resources into the developing reproductive tissue is thought to be under the co-limiting effects of source and sink strength. The dynamics of this co-limitation are unknown, largely due to an inability to measure the flux of resources into a developing sink. Here we use nuclear magnetic resonance (NMR) sensors to measure sink strength by quantifying rates of pod dry matter accumulation (pod loading) in Phaseolus vulgaris at 13-min intervals across the diel period. Rates of pod loading showed contrasting variation across light and dark periods during the onset of water deficit. In addition, rates of pod loading appeared decoupled from net photosynthetic rates when adjusted to the plant scale. Combined, these observations illustrate that the rate of pod development varies under water limitation and that continuous, non-invasive methodologies to measure sink strength provide insight into the governing processes that determine the development of reproductive tissues.
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Affiliation(s)
| | - Millicent R Smith
- School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW 2006, Australia
- IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | - Carel W Windt
- IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
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30
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Zheng Z, Hu H, Gao S, Zhou H, Luo W, Kage U, Liu C, Jia J. Leaf thickness of barley: genetic dissection, candidate genes prediction and its relationship with yield-related traits. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2022; 135:1843-1854. [PMID: 35348823 DOI: 10.1007/s00122-022-04076-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 03/07/2022] [Indexed: 06/14/2023]
Abstract
In this first genetic study on assessing leaf thickness directly in cereals, major and environmentally stable QTL were detected in barley and candidate genes underlying a major locus were identified. Leaf thickness (LT) is an important characteristic affecting leaf functions which have been intensively studied. However, as LT has a small dimension in many plant species and technically difficult to measure, previous studies on this characteristic are often based on indirect estimations. In the first study of detecting QTL controlling LT by directly measuring the characteristic in barley, large and stable loci were detected from both field and glasshouse trials conducted in different cropping seasons by assessing a population of 201 recombinant inbred lines. Four loci (locating on chromosome arms 2H, 3H, 5H and 6H, respectively) were consistently detected for flag leaf thickness (FLT) in each of these trials. The one on 6H had the largest effect, with a maximum LOD 9.8 explaining up to 20.9% of phenotypic variance. FLT does not only show strong interactions with flag leaf width and flag leaf area but has also strong correlations with fertile tiller number, spike row types, kernel number per spike and heading date. Though with reduced efficiency, these loci were also detectable from assessing second last leaf of fully grown plants or even from assessing the third leaves of seedlings. Taking advantage of the high-quality genome assemblies for both parents of the mapping population used in this study, three candidate genes underlying the 6H QTL were predicted based on orthologous analysis. These results do not only broaden our understanding on genetic basis of LT and its relationship with other traits in cereal crops but also form the bases for cloning and functional analysis of genes regulating LT in barley.
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Affiliation(s)
- Zhi Zheng
- CSIRO Agriculture and Food, 306 Carmody Road, St Lucia, QLD, 4067, Australia
| | - Haiyan Hu
- College of Life Science and Technology, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China
| | - Shang Gao
- School of Life Science, Tsinghua University, Beijing, 100084, China
| | - Hong Zhou
- CSIRO Agriculture and Food, 306 Carmody Road, St Lucia, QLD, 4067, Australia
- Triticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, China
| | - Wei Luo
- CSIRO Agriculture and Food, 306 Carmody Road, St Lucia, QLD, 4067, Australia
- Triticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, China
| | - Udaykumar Kage
- CSIRO Agriculture and Food, 306 Carmody Road, St Lucia, QLD, 4067, Australia
| | - Chunji Liu
- CSIRO Agriculture and Food, 306 Carmody Road, St Lucia, QLD, 4067, Australia.
| | - Jizeng Jia
- National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
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31
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Burnett AC, Kromdijk J. Can we improve the chilling tolerance of maize photosynthesis through breeding? JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:3138-3156. [PMID: 35143635 PMCID: PMC9126739 DOI: 10.1093/jxb/erac045] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Accepted: 02/02/2022] [Indexed: 05/11/2023]
Abstract
Chilling tolerance is necessary for crops to thrive in temperate regions where cold snaps and lower baseline temperatures place limits on life processes; this is particularly true for crops of tropical origin such as maize. Photosynthesis is often adversely affected by chilling stress, yet the maintenance of photosynthesis is essential for healthy growth and development, and most crucially for yield. In this review, we describe the physiological basis for enhancing chilling tolerance of photosynthesis in maize by examining nine key responses to chilling stress. We synthesize current knowledge of genetic variation for photosynthetic chilling tolerance in maize with respect to each of these traits and summarize the extent to which genetic mapping and candidate genes have been used to understand the genomic regions underpinning chilling tolerance. Finally, we provide perspectives on the future of breeding for photosynthetic chilling tolerance in maize. We advocate for holistic and high-throughput approaches to screen for chilling tolerance of photosynthesis in research and breeding programmes in order to develop resilient crops for the future.
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Affiliation(s)
- Angela C Burnett
- Department of Plant Sciences, University of CambridgeCambridge, UK
- Correspondence:
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32
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Sink Strength Promoting Remobilization of Non-Structural Carbohydrates by Activating Sugar Signaling in Rice Stem during Grain Filling. Int J Mol Sci 2022; 23:ijms23094864. [PMID: 35563255 PMCID: PMC9106009 DOI: 10.3390/ijms23094864] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Revised: 04/25/2022] [Accepted: 04/25/2022] [Indexed: 02/05/2023] Open
Abstract
The remobilization of non-structural carbohydrates (NSCs) in the stem is essential for rice grain filling so as to improve grain yield. We conducted a two-year field experiment to deeply investigate their relationship. Two large-panicle rice varieties with similar spikelet size, CJ03 and W1844, were used to conduct two treatments (removing-spikelet group and control group). Compared to CJ03, W1844 had higher 1000-grain weight, especially for the grain growth of inferior spikelets (IS) after removing the spikelet. These results were mainly ascribed to the stronger sink strength of W1844 than that of CJ03 contrasting in the same group. The remobilization efficiency of NSC in the stem decreased significantly after removing the spikelet for both CJ03 and W1844, and the level of sugar signaling in the T6P-SnRK1 pathway was also significantly changed. However, W1844 outperformed CJ03 in terms of the efficiency of carbon reserve remobilization under the same treatments. More precisely, there was a significant difference during the early grain-filling stage in terms of the conversion of sucrose and starch. Interestingly, the sugar signaling of the T6P and SnRK1 pathways also represented an obvious change. Hence, sugar signaling may be promoted by sink strength to remobilize the NSCs of the rice stem during grain filling to further advance crop yield.
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33
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Liu R, Feng X, Li C, Ma J, Wang Y, Li Y. The Importance of Stem Photosynthesis for Two Desert Shrubs Across Different Groundwater Depths. FRONTIERS IN PLANT SCIENCE 2022; 13:804786. [PMID: 35371182 PMCID: PMC8965657 DOI: 10.3389/fpls.2022.804786] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Accepted: 02/10/2022] [Indexed: 06/01/2023]
Abstract
Water availability could alter multiple ecophysiological processes such as water use strategy, photosynthesis, and respiration, thereby modifying plant water use and carbon gain. However, a lack of field observations hinders our understanding of how water availability affects stem photosynthesis at both organ and plant levels of desert shrubs. In this study, we measured gas exchange and oxygen stable isotopes to quantify water sources, stem recycling photosynthesis, and whole-plant carbon balance in two coexisting Haloxylon species (Haloxylon ammodendron and Haloxylon persicum) at different groundwater depths in the Gurbantonggut Desert. The overall aim of the study was to analyze and quantify the important role of stem recycling photosynthesis for desert shrubs (Haloxylon species) under different groundwater depths. The results showed that (1) regardless of changes in groundwater depth, H. ammodendron consistently used groundwater and H. persicum used deep soil water as their main water source, with greater than 75% of xylem water being derived from groundwater and deep soil water for the two species, respectively; (2) stem recycling photosynthesis refixed 72-81% of the stem dark respiration, and its contribution to whole-plant carbon assimilation was 10-21% for the two species; and (3) deepened groundwater increased stem water use efficiency and its contribution to whole-plant carbon assimilation in H. persicum but not in H. ammodendron. Our study provided observational evidence that deepened groundwater depth induced H. persicum to increase stem recycling photosynthetic capacity and a greater contribution to whole-plant carbon assimilation, but this did not occur on H. ammodendron. Our study indicates that stem recycling photosynthesis may play an important role in the survival of desert shrubs in drought conditions.
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Affiliation(s)
- Ran Liu
- State Key Lab of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
- Fukang National Station of Observation and Research for Desert Ecosystem, Xinjiang, China
| | - Xiaolong Feng
- State Key Lab of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
- Fukang National Station of Observation and Research for Desert Ecosystem, Xinjiang, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Congjuan Li
- Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
| | - Jie Ma
- State Key Lab of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
- Fukang National Station of Observation and Research for Desert Ecosystem, Xinjiang, China
| | - Yugang Wang
- State Key Lab of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
- Fukang National Station of Observation and Research for Desert Ecosystem, Xinjiang, China
| | - Yan Li
- State Key Lab of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, China
- Fukang National Station of Observation and Research for Desert Ecosystem, Xinjiang, China
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Sell M, Ostonen I, Rohula-Okunev G, Rusalepp L, Rezapour A, Kupper P. Responses of fine root exudation, respiration and morphology in three early successional tree species to increased air humidity and different soil nitrogen sources. TREE PHYSIOLOGY 2022; 42:557-569. [PMID: 34505158 DOI: 10.1093/treephys/tpab118] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Revised: 08/16/2021] [Accepted: 09/01/2021] [Indexed: 06/13/2023]
Abstract
Global climate change scenarios predict an increase in air temperature, precipitation and air humidity for northern latitudes. Elevated air humidity may significantly reduce the water flux through forest canopies and affect interactions between water and nutrient uptake. However, we have limited understanding of how altered transpiration would affect root respiration and carbon (C) exudation as fine root morphology acclimates to different water flux. We investigated the effects of elevated air relative humidity (eRH) and different inorganic nitrogen sources (NO3- and NH4+) on above and belowground traits in hybrid aspen (Populus × wettsteinii Hämet-Ahti), silver birch (Betula pendula Roth.) and Scots pine (Pinus sylvestris L.) grown under controlled climate chamber conditions. The eRH significantly decreased the transpiration flux in all species, decreased root mass-specific exudation in pine, and increased root respiration in aspen. eRH also affected fine root morphology, with specific root area increasing for birch but decreasing in pine. The species comparison revealed that pine had the highest C exudation, whereas birch had the highest root respiration rate. Both humidity and nitrogen treatments affected the share of absorptive and pioneer roots within fine roots; however, the response was species-specific. The proportion of absorptive roots was highest in birch and aspen, the share of pioneer roots was greatest in aspen and the share of transport roots was greatest in pine. Fine roots with lower root tissue density were associated with pioneer root tips and had a higher C exudation rate. Our findings underline the importance of considering species-specific differences in relation to air humidity and soil nitrogen availability that interactively affect the C input-output balance. We highlight the role of changes in the fine root functional distribution as an important acclimation mechanism of trees in response to environmental change.
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Affiliation(s)
- Marili Sell
- University of Tartu, Institute of Ecology and Earth Sciences, Vanemuise 46, 51003, Tartu, Estonia
| | - Ivika Ostonen
- University of Tartu, Institute of Ecology and Earth Sciences, Vanemuise 46, 51003, Tartu, Estonia
| | - Gristin Rohula-Okunev
- University of Tartu, Institute of Ecology and Earth Sciences, Vanemuise 46, 51003, Tartu, Estonia
| | - Linda Rusalepp
- University of Tartu, Institute of Ecology and Earth Sciences, Vanemuise 46, 51003, Tartu, Estonia
| | - Azadeh Rezapour
- University of Tartu, Institute of Ecology and Earth Sciences, Vanemuise 46, 51003, Tartu, Estonia
| | - Priit Kupper
- University of Tartu, Institute of Ecology and Earth Sciences, Vanemuise 46, 51003, Tartu, Estonia
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Bebre I, Marques I, Annighöfer P. Biomass Allocation and Leaf Morphology of Saplings Grown under Various Conditions of Light Availability and Competition Types. PLANTS 2022; 11:plants11030305. [PMID: 35161289 PMCID: PMC8839049 DOI: 10.3390/plants11030305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/28/2021] [Revised: 01/21/2022] [Accepted: 01/23/2022] [Indexed: 11/16/2022]
Abstract
Plant growth is almost always limited by light availability and competition. However, plants are generally plastic and can change their morphology and biomass allocation to optimize growth under suboptimal conditions. We set up a controlled pot experiment with three light availability levels (10%, 20%, and 50%) to study the effect of light and competition on the biomass allocation and leaf morphology in monospecific and mixed pots of recently planted European beech (Fagus sylvatica L.), Norway spruce (Picea abies (L.) Karst.), and Douglas fir (Pseudotsuga menziesii (Mirb.) Franco) saplings using a quantile regression model. Specific leaf area (SLA) showed the strongest reaction and increased with decreasing light availability. Woody aboveground mass fraction (AMF) increased with decreasing light availability, but the effect of light on biomass allocation was less pronounced than on SLA. The SLA, woody AMF, and root mass fraction (RMF) of the two conifer species and European beech varied greatly, with European beech having a higher SLA and RMF than the two conifer species. The associated effect of plant size on biomass allocation was small, and the strength of the association was not meaningful on a practical level. The competitor’s effect on biomass allocation was minor overall and only present for some species, suggesting that species’ functional dissimilarity does not greatly affect allocational patterns in early tree development stages.
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Affiliation(s)
- Ieva Bebre
- Spatial Structures and Digitization of Forests, Faculty of Forest Sciences and Forest Ecology, University of Göttingen, Büsgenweg 1, 37077 Göttingen, Germany
- Correspondence:
| | - Isa Marques
- Spatial Data Science and Statistical Learning, Faculty of Business and Economics, University of Göttingen, Platz der Göttinger Sieben 3, 37073 Göttingen, Germany;
| | - Peter Annighöfer
- Forest and Agroforest Systems, School of Life Sciences, Technical University of Munich (TUM), Hans-Carl-von-Carlowitz-Platz 2, 85354 Freising, Germany;
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Grzebisz W, Frąckowiak K, Spiżewski T, Przygocka-Cyna K. Does Elemental Sulfur Act as an Effective Measure to Control the Seasonal Growth Dynamics of Potato Tubers (Solanum tuberosum L.)? PLANTS 2022; 11:plants11030248. [PMID: 35161228 PMCID: PMC8839987 DOI: 10.3390/plants11030248] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2021] [Revised: 01/09/2022] [Accepted: 01/13/2022] [Indexed: 11/24/2022]
Abstract
The in-season dynamics of potato tuber biomass (TTB) growth requires effective nitrogen (N) control. This hypothesis was tested in 2006 and 2007. The two-factorial experiment with two rates of N (60, 120 kg ha−1) and sulfur (S; 0, 50 kg ha−1) was carried out in the split-plot design. The third factor was the sampling of plants at 10-day intervals. The collected plant material was divided into leaves, stems, stolons + roots, and tubers. The seasonal trend of TTB was linear, while the biomass of leaves, stems, and stolons + roots was consistent with polynomial regression models. TTB was controlled by (i) the date of potato growth after emergence, when the TTB exceeded the leaf biomass (DAEcrit); (ii) the stem growth rate; and iii) the share of stems in the total potato biomass. TTB growth was reduced when DAEcrit preceded the DAEop for leaf biomass, determining its maximum. This phenomenon appeared in 2007 on plots fertilized only with N. The absolute growth rate of the stem biomass, exceeding ¼ of that of the tuber biomass in the descending phase, resulted in an increased and prolonged share of stems in the total potato biomass, which ultimately led to a decrease in tuber yield. The use of sulfur to balance the N, applied effectively, controlled the growth rate of potato organs competing with tubers.
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Affiliation(s)
- Witold Grzebisz
- Department of Agricultural Chemistry and Environmental Biogeochemistry, Poznan University of Life Sciences, Wojska Polskiego 28, 60-637 Poznan, Poland;
- Correspondence:
| | | | - Tomasz Spiżewski
- Department of Vegetables Production, Poznan University of Life Sciences, Wojska Polskiego 28, 60-637 Poznań, Poland;
| | - Katarzyna Przygocka-Cyna
- Department of Agricultural Chemistry and Environmental Biogeochemistry, Poznan University of Life Sciences, Wojska Polskiego 28, 60-637 Poznan, Poland;
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Analysis of Global Gene Expression in Maize (Zea mays) Vegetative and Reproductive Tissues That Differ in Accumulation of Starch and Sucrose. PLANTS 2022; 11:plants11030238. [PMID: 35161219 PMCID: PMC8838981 DOI: 10.3390/plants11030238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 10/21/2021] [Accepted: 10/22/2021] [Indexed: 11/17/2022]
Abstract
Carbon allocation between vegetative and reproductive tissues impacts cereal grain production. Despite great agricultural importance, sink–source relationships have not been fully characterized at the early reproductive stages in maize. Here, we quantify the accumulation of non-structural carbohydrates and patterns of gene expression in the top internode of the stem and the female inflorescence of maize at the onset of grain filling (reproductive stage R1). Top internode stem and female inflorescence tissues of the Puma maize inbred line were collected at reproductive stage R1 (without pollination) and non-structural carbohydrates were quantified by spectrophotometry. The female inflorescence accumulated starch at higher levels than the top internode of the stem. Global mRNA transcript levels were then evaluated in both tissues by RNA sequencing. Gene expression analysis identified 491 genes differentially expressed between the female inflorescence and the top stem internode. Gene ontology classification of differentially expressed genes showed enrichment for sucrose synthesis, the light-dependent reactions of photosynthesis, and transmembrane transporters. Our results suggest that sugar transporters play a key role in sugar partitioning in the maize stem and reveal previously uncharacterized differences between the female inflorescence and the top internode of the stem at early reproductive stages.
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Sekhar KM, Kota VR, Reddy TP, Rao KV, Reddy AR. Amelioration of plant responses to drought under elevated CO 2 by rejuvenating photosynthesis and nitrogen use efficiency: implications for future climate-resilient crops. PHOTOSYNTHESIS RESEARCH 2021; 150:21-40. [PMID: 32632534 DOI: 10.1007/s11120-020-00772-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Accepted: 06/24/2020] [Indexed: 05/15/2023]
Abstract
The contemporary global agriculture is beset with serious threats from diverse eco-environmental conditions causing decreases in crop yields by ~ 15%. These yield losses might increase further due to climate change scenarios leading to increased food prices triggering social unrest and famines. Urbanization and industrialization are often associated with rapid increases in greenhouse gases (GHGs) especially atmospheric CO2 concentration [(CO2)]. Increase in atmospheric [CO2] significantly improved crop photosynthesis and productivity initially which vary with plant species, genotype, [CO2] exposure time and biotic as well as abiotic stress factors. Numerous attempts have been made using different plant species to unravel the physiological, cellular and molecular effects of elevated [CO2] as well as drought. This review focuses on plant responses to elevated [CO2] and drought individually as well as in combination with special reference to physiology of photosynthesis including its acclimation. Furthermore, the functional role of nitrogen use efficiency (NUE) and its relation to photosynthetic acclimation and crop productivity under elevated [CO2] and drought are reviewed. In addition, we also discussed different strategies to ameliorate the limitations of ribulose-1,5-bisphosphate (RuBP) carboxylation and RuBP regeneration. Further, improved stomatal and mesophyll conductance and NUE for enhanced crop productivity under fast changing global climate conditions through biotechnological approaches are also discussed here. We conclude that multiple gene editing approaches for key events in photosynthetic processes would serve as the best strategy to generate resilient crop plants with improved productivity under fast changing climate.
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Affiliation(s)
- Kalva Madhana Sekhar
- Center for Plant Molecular Biology (CPMB), Osmania University, Hyderabad, Telangana, 500007, India
| | - Vamsee Raja Kota
- Center for Plant Molecular Biology (CPMB), Osmania University, Hyderabad, Telangana, 500007, India
| | - T Papi Reddy
- Center for Plant Molecular Biology (CPMB), Osmania University, Hyderabad, Telangana, 500007, India
| | - K V Rao
- Center for Plant Molecular Biology (CPMB), Osmania University, Hyderabad, Telangana, 500007, India
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Yang X, Liu D, Lu H, Weston DJ, Chen JG, Muchero W, Martin S, Liu Y, Hassan MM, Yuan G, Kalluri UC, Tschaplinski TJ, Mitchell JC, Wullschleger SD, Tuskan GA. Biological Parts for Plant Biodesign to Enhance Land-Based Carbon Dioxide Removal. BIODESIGN RESEARCH 2021; 2021:9798714. [PMID: 37849951 PMCID: PMC10521660 DOI: 10.34133/2021/9798714] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Accepted: 11/07/2021] [Indexed: 10/19/2023] Open
Abstract
A grand challenge facing society is climate change caused mainly by rising CO2 concentration in Earth's atmosphere. Terrestrial plants are linchpins in global carbon cycling, with a unique capability of capturing CO2 via photosynthesis and translocating captured carbon to stems, roots, and soils for long-term storage. However, many researchers postulate that existing land plants cannot meet the ambitious requirement for CO2 removal to mitigate climate change in the future due to low photosynthetic efficiency, limited carbon allocation for long-term storage, and low suitability for the bioeconomy. To address these limitations, there is an urgent need for genetic improvement of existing plants or construction of novel plant systems through biosystems design (or biodesign). Here, we summarize validated biological parts (e.g., protein-encoding genes and noncoding RNAs) for biological engineering of carbon dioxide removal (CDR) traits in terrestrial plants to accelerate land-based decarbonization in bioenergy plantations and agricultural settings and promote a vibrant bioeconomy. Specifically, we first summarize the framework of plant-based CDR (e.g., CO2 capture, translocation, storage, and conversion to value-added products). Then, we highlight some representative biological parts, with experimental evidence, in this framework. Finally, we discuss challenges and strategies for the identification and curation of biological parts for CDR engineering in plants.
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Affiliation(s)
- Xiaohan Yang
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Degao Liu
- Department of Genetics, Cell Biology and Development, Center for Precision Plant Genomics, and Center for Genome Engineering, University of Minnesota, Saint Paul, MN 55108, USA
| | - Haiwei Lu
- Department of Academic Education, Central Community College-Hastings, Hastings, NE 68902USA
| | - David J. Weston
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Jin-Gui Chen
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Wellington Muchero
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Stanton Martin
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Yang Liu
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Md Mahmudul Hassan
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Guoliang Yuan
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Udaya C. Kalluri
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Timothy J. Tschaplinski
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Julie C. Mitchell
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Stan D. Wullschleger
- Environmental Sciences Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
| | - Gerald A. Tuskan
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
- The Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA
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Fan S, Wang D, Xie H, Wang H, Qin Y, Hu G, Zhao J. Sugar Transport, Metabolism and Signaling in Fruit Development of Litchi chinensis Sonn: A Review. Int J Mol Sci 2021; 22:ijms222011231. [PMID: 34681891 PMCID: PMC8540296 DOI: 10.3390/ijms222011231] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 10/15/2021] [Accepted: 10/15/2021] [Indexed: 12/03/2022] Open
Abstract
Litchi chinensis Sonn. is an important evergreen fruit crop cultivated in the tropical and subtropical regions. The edible portion of litchi fruit is the aril, which contains a high concentration of sucrose, glucose, and fructose. In this study, we review various aspects of sugar transport, metabolism, and signaling during fruit development in litchi. We begin by detailing the sugar transport and accumulation during aril development, and the biosynthesis of quebrachitol as a transportable photosynthate is discussed. We then document sugar metabolism in litchi fruit. We focus on the links between sugar signaling and seed development as well as fruit abscission. Finally, we outline future directions for research on sugar metabolism and signaling to improve fruit yield and quality.
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Sales CRG, Wang Y, Evers JB, Kromdijk J. Improving C4 photosynthesis to increase productivity under optimal and suboptimal conditions. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:5942-5960. [PMID: 34268575 PMCID: PMC8411859 DOI: 10.1093/jxb/erab327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Accepted: 07/09/2021] [Indexed: 05/05/2023]
Abstract
Although improving photosynthetic efficiency is widely recognized as an underutilized strategy to increase crop yields, research in this area is strongly biased towards species with C3 photosynthesis relative to C4 species. Here, we outline potential strategies for improving C4 photosynthesis to increase yields in crops by reviewing the major bottlenecks limiting the C4 NADP-malic enzyme pathway under optimal and suboptimal conditions. Recent experimental results demonstrate that steady-state C4 photosynthesis under non-stressed conditions can be enhanced by increasing Rubisco content or electron transport capacity, both of which may also stimulate CO2 assimilation at supraoptimal temperatures. Several additional putative bottlenecks for photosynthetic performance under drought, heat, or chilling stress or during photosynthetic induction await further experimental verification. Based on source-sink interactions in maize, sugarcane, and sorghum, alleviating these photosynthetic bottlenecks during establishment and growth of the harvestable parts are likely to improve yield. The expected benefits are also shown to be augmented by the increasing trend in planting density, which increases the impact of photosynthetic source limitation on crop yields.
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Affiliation(s)
- Cristina R G Sales
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK
| | - Yu Wang
- Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Jochem B Evers
- Centre for Crops Systems Analysis (WUR), Wageningen University, Wageningen, The Netherlands
| | - Johannes Kromdijk
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, UK
- Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
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McIntyre KE, Bush DR, Argueso CT. Cytokinin Regulation of Source-Sink Relationships in Plant-Pathogen Interactions. FRONTIERS IN PLANT SCIENCE 2021; 12:677585. [PMID: 34504504 PMCID: PMC8421792 DOI: 10.3389/fpls.2021.677585] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Accepted: 07/12/2021] [Indexed: 06/01/2023]
Abstract
Cytokinins are plant hormones known for their role in mediating plant growth. First discovered for their ability to promote cell division, this class of hormones is now associated with many other cellular and physiological functions. One of these functions is the regulation of source-sink relationships, a tightly controlled process that is essential for proper plant growth and development. As discovered more recently, cytokinins are also important for the interaction of plants with pathogens, beneficial microbes and insects. Here, we review the importance of cytokinins in source-sink relationships in plants, with relation to both carbohydrates and amino acids, and highlight a possible function for this regulation in the context of plant biotic interactions.
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Affiliation(s)
- Kathryn E. McIntyre
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States
- Graduate Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO, United States
| | - Daniel R. Bush
- Department of Biology, Colorado State University, Fort Collins, CO, United States
| | - Cristiana T. Argueso
- Department of Agricultural Biology, Colorado State University, Fort Collins, CO, United States
- Graduate Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO, United States
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Burgos-Avila YE, Álvarez-Herrera JG, Pinto-Acero YL. Efecto fisiológico de elicitores en el crecimiento y desarrollo de papa (Solanum tuberosum L.) variedad Diacol Capiro. REVISTA U.D.C.A ACTUALIDAD & DIVULGACIÓN CIENTÍFICA 2021. [DOI: 10.31910/rudca.v24.n2.2021.1337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
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44
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Burnett AC, Serbin SP, Rogers A. Source:sink imbalance detected with leaf- and canopy-level spectroscopy in a field-grown crop. PLANT, CELL & ENVIRONMENT 2021; 44:2466-2479. [PMID: 33764536 DOI: 10.1111/pce.14056] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Revised: 03/23/2021] [Accepted: 03/23/2021] [Indexed: 05/21/2023]
Abstract
The finely tuned balance between sources and sinks determines plant resource partitioning and regulates growth and development. Understanding and measuring metabolic indicators of source or sink limitation forms a vital part of global efforts to increase crop yield for future food security. We measured metabolic profiles of Cucurbita pepo (zucchini) grown in the field under carbon sink limitation and control conditions. We demonstrate that these profiles can be measured non-destructively using hyperspectral reflectance at both leaf and canopy scales. Total non-structural carbohydrates (TNC) increased 82% in sink-limited plants; leaf mass per unit area (LMA) increased 38% and free amino acids increased 22%. Partial least-squares regression (PLSR) models link these measured functional traits with reflectance data, enabling high-throughput estimation of traits comprising the sink limitation response. Leaf- and canopy-scale models for TNC had R2 values of 0.93 and 0.64 and %RMSE of 13 and 38%, respectively. For LMA, R2 values were 0.91 and 0.60 and %RMSE 7 and 14%; for free amino acids, R2 was 0.53 and 0.21 with %RMSE 20 and 26%. Remote sensing can enable accurate, rapid detection of sink limitation in the field at the leaf and canopy scale, greatly expanding our ability to understand and measure metabolic responses to stress.
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Affiliation(s)
- Angela C Burnett
- Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, New York, USA
| | - Shawn P Serbin
- Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, New York, USA
| | - Alistair Rogers
- Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, New York, USA
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Kakar N, Bheemanahalli R, Jumaa S, Redoña E, Warburton ML, Reddy KR. Assessment of agro-morphological, physiological and yield traits diversity among tropical rice. PeerJ 2021; 9:e11752. [PMID: 34322324 PMCID: PMC8297474 DOI: 10.7717/peerj.11752] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 06/21/2021] [Indexed: 01/17/2023] Open
Abstract
Rice (Oryza sativa L.) is an essential staple food crop, but the per acre average rice yield is less than its substantial potential in many countries. Rice breeders and growers would benefit from a robust genotypes with better morpho-physiological and yield-related traits. Here, seventy-four new rice genotypes were phenotyped over two years for their gas exchange and yield potential-related traits under Mississippi rice-growing conditions. A wide range of variability was observed among genotypes for all measured traits. Detailed phenotyping of rice genotypes revealed two key relationships that function together to contribute to yield potential under the southern US climate. The first one, grain yield, grain number, and spikelet fertility, showed considerable correlation (r = 0.45 to 0.79, p < 0.001) to harvest index. Conversely, days to anthesis had a high and negative correlation with harvest index (r = −0.79, p < 0.001), which suggests that selection for short duration genotypes with efficient partitioning could improve the yields under southern US climatic conditions. Additive response index revealed a higher positive association with yield traits (R2 = 0.59) than physiological (R2 = 0.28) and morphological traits (R2 = 0.21). Compared with the commercial genotype Rex, 21.6% and 47.3% of the rice genotypes had a higher gas exchange and yield response scores. IR08A172, IR07K142 and IR07F287 were ranked as high performers in physiological and yield response indices. Our study highlights that selection for short-duration yield-related traits with efficient sink capacity traits is desirable for future breeding programs.
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Affiliation(s)
- Naqeebullah Kakar
- Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, United States
| | - Raju Bheemanahalli
- Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, United States
| | - Salah Jumaa
- Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, United States.,Field Crops Department, Tikrit University, Tikrit, Iraq
| | - Edilberto Redoña
- Delta Research and Extension Center, Mississippi State University, Stoneville, MS, United States
| | - Marilyn L Warburton
- Corn Host Plant Resistance Research Unit, Crop Science Research Laboratory, USDA-ARS, Mississippi State, MS, United States
| | - Kambham R Reddy
- Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, United States
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Verbraeken L, Wuyts N, Mertens S, Cannoot B, Maleux K, Demuynck K, De Block J, Merchie J, Dhondt S, Bonaventure G, Crafts-Brandner S, Vogel J, Bruce W, Inzé D, Maere S, Nelissen H. Drought affects the rate and duration of organ growth but not inter-organ growth coordination. PLANT PHYSIOLOGY 2021; 186:1336-1353. [PMID: 33788927 PMCID: PMC8195526 DOI: 10.1093/plphys/kiab155] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 03/02/2021] [Indexed: 05/18/2023]
Abstract
Drought at flowering and grain filling greatly reduces maize (Zea mays) yield. Climate change is causing earlier and longer-lasting periods of drought, which affect the growth of multiple maize organs throughout development. To study how long periods of water deficit impact the dynamic nature of growth, and to determine how these relate to reproductive drought, we employed a high-throughput phenotyping platform featuring precise irrigation, imaging systems, and image-based biomass estimations. Prolonged drought resulted in a reduction of growth rate of individual organs-though an extension of growth duration partially compensated for this-culminating in lower biomass and delayed flowering. However, long periods of drought did not affect the highly organized succession of maximal growth rates of the distinct organs, i.e. leaves, stems, and ears. Two drought treatments negatively affected distinct seed yield components: Prolonged drought mainly reduced the number of spikelets, and drought during the reproductive period increased the anthesis-silking interval. The identification of these divergent biomass and yield components, which were affected by the shift in duration and intensity of drought, will facilitate trait-specific breeding toward future climate-resilient crops.
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Affiliation(s)
- Lennart Verbraeken
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Nathalie Wuyts
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Stien Mertens
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Bernard Cannoot
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Katrien Maleux
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Kirin Demuynck
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Jolien De Block
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Julie Merchie
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Stijn Dhondt
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | | | | | | | | | - Dirk Inzé
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Steven Maere
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Hilde Nelissen
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- VIB Center for Plant Systems Biology, 9052 Ghent, Belgium
- Author for communication:
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47
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Jansson C, Faiola C, Wingler A, Zhu XG, Kravchenko A, de Graaff MA, Ogden AJ, Handakumbura PP, Werner C, Beckles DM. Crops for Carbon Farming. FRONTIERS IN PLANT SCIENCE 2021; 12:636709. [PMID: 34149744 PMCID: PMC8211891 DOI: 10.3389/fpls.2021.636709] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 04/26/2021] [Indexed: 05/03/2023]
Abstract
Agricultural cropping systems and pasture comprise one third of the world's arable land and have the potential to draw down a considerable amount of atmospheric CO2 for storage as soil organic carbon (SOC) and improving the soil carbon budget. An improved soil carbon budget serves the dual purpose of promoting soil health, which supports crop productivity, and constituting a pool from which carbon can be converted to recalcitrant forms for long-term storage as a mitigation measure for global warming. In this perspective, we propose the design of crop ideotypes with the dual functionality of being highly productive for the purposes of food, feed, and fuel, while at the same time being able to facilitate higher contribution to soil carbon and improve the below ground ecology. We advocate a holistic approach of the integrated plant-microbe-soil system and suggest that significant improvements in soil carbon storage can be achieved by a three-pronged approach: (1) design plants with an increased root strength to further allocation of carbon belowground; (2) balance the increase in belowground carbon allocation with increased source strength for enhanced photosynthesis and biomass accumulation; and (3) design soil microbial consortia for increased rhizosphere sink strength and plant growth-promoting (PGP) properties.
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Affiliation(s)
- Christer Jansson
- Pacific Northwest National Laboratory, Richland, WA, United States
| | - Celia Faiola
- Department of Ecology and Evolutionary Biology, University of California, Irvine, Irvine, CA, United States
| | - Astrid Wingler
- School of Biological, Earth & Environmental Sciences and Environmental Research Institute, University College Cork, Cork, Ireland
| | - Xin-Guang Zhu
- National Key Laboratory for Plant Molecular Genetics, Center of Excellence for Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China
| | - Alexandra Kravchenko
- Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI, United States
| | - Marie-Anne de Graaff
- Department of Biological Sciences, Boise State University, Boise, ID, United States
| | - Aaron J. Ogden
- Pacific Northwest National Laboratory, Richland, WA, United States
| | | | | | - Diane M. Beckles
- Department of Plant Sciences, University of California, Davis, Davis, CA, United States
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Reynolds M, Atkin OK, Bennett M, Cooper M, Dodd IC, Foulkes MJ, Frohberg C, Hammer G, Henderson IR, Huang B, Korzun V, McCouch SR, Messina CD, Pogson BJ, Slafer GA, Taylor NL, Wittich PE. Addressing Research Bottlenecks to Crop Productivity. TRENDS IN PLANT SCIENCE 2021; 26:607-630. [PMID: 33893046 DOI: 10.1016/j.tplants.2021.03.011] [Citation(s) in RCA: 43] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Revised: 03/15/2021] [Accepted: 03/17/2021] [Indexed: 05/22/2023]
Abstract
Asymmetry of investment in crop research leads to knowledge gaps and lost opportunities to accelerate genetic gain through identifying new sources and combinations of traits and alleles. On the basis of consultation with scientists from most major seed companies, we identified several research areas with three common features: (i) relatively underrepresented in the literature; (ii) high probability of boosting productivity in a wide range of crops and environments; and (iii) could be researched in 'precompetitive' space, leveraging previous knowledge, and thereby improving models that guide crop breeding and management decisions. Areas identified included research into hormones, recombination, respiration, roots, and source-sink, which, along with new opportunities in phenomics, genomics, and bioinformatics, make it more feasible to explore crop genetic resources and improve breeding strategies.
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Affiliation(s)
- Matthew Reynolds
- International Maize and Wheat Improvement Center (CIMMYT), Km. 45, Carretera Mexico, El Batan, Texcoco, Mexico.
| | - Owen K Atkin
- Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University Canberra, Acton, ACT 2601, Australia.
| | - Malcolm Bennett
- Plant and Crop Sciences, School of Biosciences, University of Nottingham, Leicestershire, LE12 5RD, UK.
| | - Mark Cooper
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Ian C Dodd
- The Lancaster Environment Centre, Lancaster University, Lancaster, LA1 4YQ, UK
| | - M John Foulkes
- Plant and Crop Sciences, School of Biosciences, University of Nottingham, Leicestershire, LE12 5RD, UK
| | - Claus Frohberg
- BASF BBC-Innovation Center Gent, Technologiepark-Zwijnaarde 101, 9052 Gent, Belgium
| | - Graeme Hammer
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Ian R Henderson
- Department of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK
| | - Bingru Huang
- Department of Plant Biology and Pathology, Rutgers University, 59 Dudley Road, New Brunswick, NJ 08901, USA.
| | | | - Susan R McCouch
- Plant Breeding & Genetics, School of Integrative Plant Sciences, Cornell University, Ithaca, NY 14850, USA.
| | - Carlos D Messina
- Corteva Agriscience, 7250 NW 62nd Avenue, Johnston, IA 50310, USA.
| | - Barry J Pogson
- Research Council Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University Canberra, Acton, ACT 2601, Australia
| | - Gustavo A Slafer
- Department of Crop and Forest Sciences, University of Lleida, AGROTECNIO, CERCA Center, Av. R. Roure 191, 25198 Lleida, Spain; ICREA, Catalonian Institution for Research and Advanced Studies, Barcelona, Spain.
| | - Nicolas L Taylor
- ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences and Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia
| | - Peter E Wittich
- Syngenta Seeds B.V., Westeinde 62, 1601 BK, Enkhuizen, The Netherlands.
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49
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Mathan J, Singh A, Ranjan A. Sucrose transport and metabolism control carbon partitioning between stem and grain in rice. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:4355-4372. [PMID: 33587747 DOI: 10.1093/jxb/erab066] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Accepted: 02/09/2021] [Indexed: 06/12/2023]
Abstract
Source-sink relationships are key to overall crop performance. Detailed understanding of the factors that determine source-sink dynamics is imperative for the balance of biomass and grain yield in crop plants. We investigated the differences in source-sink relationships between a cultivated rice, Oryza sativa cv. Nipponbare, and a wild rice, Oryza australiensis, which show striking differences in biomass and grain yield. Oryza australiensis, which accumulates a higher biomass, not only showed higher photosynthesis per unit leaf area but also exported more sucrose from leaves compared with Nipponbare. However, grain features and sugar content suggested limited sucrose mobilization to grains in the wild rice due to vasculature and sucrose transporter functions. Low cell wall invertase activity and high sucrose synthase cleavage activity followed by higher expression of cellulose synthase genes in O. australiensis stem indicated that it utilized photosynthates preferentially for the synthesis of structural carbohydrates, resulting in high biomass. In contrast, source-sink relationships favored high grain yield in Nipponbare via accumulation of transitory starch in the stem, due to higher expression of starch biosynthetic genes, which is mobilized to panicles at the grain filling stage. Thus, vascular features, sucrose transport, and functions of sugar metabolic enzymes explained the differences in source-sink relationships between Nipponbare and O. australiensis.
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Affiliation(s)
- Jyotirmaya Mathan
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Anuradha Singh
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Aashish Ranjan
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
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50
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Matthews ML, Marshall-Colón A. Multiscale plant modeling: from genome to phenome and beyond. Emerg Top Life Sci 2021; 5:231-237. [PMID: 33543231 PMCID: PMC8166335 DOI: 10.1042/etls20200276] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 01/18/2021] [Accepted: 01/20/2021] [Indexed: 01/08/2023]
Abstract
Plants are complex organisms that adapt to changes in their environment using an array of regulatory mechanisms that span across multiple levels of biological organization. Due to this complexity, it is difficult to predict emergent properties using conventional approaches that focus on single levels of biology such as the genome, transcriptome, or metabolome. Mathematical models of biological systems have emerged as useful tools for exploring pathways and identifying gaps in our current knowledge of biological processes. Identification of emergent properties, however, requires their vertical integration across biological scales through multiscale modeling. Multiscale models that capture and predict these emergent properties will allow us to predict how plants will respond to a changing climate and explore strategies for plant engineering. In this review, we (1) summarize the recent developments in plant multiscale modeling; (2) examine multiscale models of microbial systems that offer insight to potential future directions for the modeling of plant systems; (3) discuss computational tools and resources for developing multiscale models; and (4) examine future directions of the field.
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Affiliation(s)
- Megan L Matthews
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA
- Institute for Sustainability, Energy, and Environment, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA
| | - Amy Marshall-Colón
- Institute for Sustainability, Energy, and Environment, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801 USA
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