1
|
Yáñez-Serrano AM, Corbera J, Portillo-Estrada M, Janssens IA, Llusià J, Filella I, Peñuelas J, Preece C, Sabater F, Fernández-Martínez M. Drivers of biogenic volatile organic compound emissions in hygrophytic bryophytes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 946:174293. [PMID: 38936717 DOI: 10.1016/j.scitotenv.2024.174293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2023] [Revised: 05/16/2024] [Accepted: 06/23/2024] [Indexed: 06/29/2024]
Abstract
Bryophytes can both emit and take up biogenic volatile organic compounds (BVOCs) to and from the environment. Despite the scarce study of these exchanges, BVOCs have been shown to be important for a wide range of ecological roles. Bryophytes are the most ancient clade of land plants and preserve very similar traits to those first land colonisers. Therefore, the study of these plants can help understand the early processes of BVOC emissions as an adaptation to terrestrial life. Here, we determine the emission rates of BVOCs from different bryophyte species to understand what drives such emissions. We studied 26 bryophyte species from temperate regions that can be found in mountain springs located in NE Spain. Bryophyte BVOC emission presented no significant phylogenetic signal for any of the compounds analysed. Hence, we used mixed linear models to investigate the species-specific differences and eco-physiological and environmental drivers of bryophyte BVOC emission. In general, species-specific variability was the main factor explaining bryophyte BVOC emissions; but additionally, photosynthetic rates and light intensity increased BVOC emissions. Despite emission measurements reported here were conducted at 30°, and may not directly correspond to emission rates in natural conditions, most of the screened species have never been measured before for BVOC emissions and therefore this information can help understand the drivers of the emissions of BVOCs in bryophytes.
Collapse
Affiliation(s)
- A M Yáñez-Serrano
- IDAEA-CSIC, 08034 Barcelona, Spain; CREAF, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain; CSIC, Global Ecology Unit, CREAF-CSIC-UAB, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain.
| | - J Corbera
- Delegació de la Serralada Litoral Central, ICHN, Barcelona, Catalonia, Spain
| | - M Portillo-Estrada
- PLECO (Plants and Ecosystems), Department of Biology, University of Antwerp, Wilrijk, Belgium
| | - I A Janssens
- PLECO (Plants and Ecosystems), Department of Biology, University of Antwerp, Wilrijk, Belgium
| | - J Llusià
- CREAF, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain; CSIC, Global Ecology Unit, CREAF-CSIC-UAB, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain
| | - I Filella
- CREAF, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain; CSIC, Global Ecology Unit, CREAF-CSIC-UAB, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain
| | - J Peñuelas
- CREAF, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain; CSIC, Global Ecology Unit, CREAF-CSIC-UAB, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain
| | - C Preece
- IRTA, Torre Marimón, Caldes de Montbui, Catalonia, Spain
| | - F Sabater
- BEECA-UB, Department of Evolutionary Biology, Ecology and Environmental Sciences, University of Barcelona, E08028 Barcelona, Catalonia, Spain
| | - M Fernández-Martínez
- CREAF, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain; CSIC, Global Ecology Unit, CREAF-CSIC-UAB, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain; Delegació de la Serralada Litoral Central, ICHN, Barcelona, Catalonia, Spain; BEECA-UB, Department of Evolutionary Biology, Ecology and Environmental Sciences, University of Barcelona, E08028 Barcelona, Catalonia, Spain
| |
Collapse
|
2
|
Weraduwage SM, Whitten D, Kulke M, Sahu A, Vermaas JV, Sharkey TD. The isoprene-responsive phosphoproteome provides new insights into the putative signalling pathways and novel roles of isoprene. PLANT, CELL & ENVIRONMENT 2024; 47:1099-1117. [PMID: 38038355 DOI: 10.1111/pce.14776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 10/30/2023] [Accepted: 11/18/2023] [Indexed: 12/02/2023]
Abstract
Many plants, especially trees, emit isoprene in a highly light- and temperature-dependent manner. The advantages for plants that emit, if any, have been difficult to determine. Direct effects on membranes have been disproven. New insights have been obtained by RNA sequencing, proteomic and metabolomic studies. We determined the responses of the phosphoproteome to exposure of Arabidopsis leaves to isoprene in the gas phase for either 1 or 5 h. Isoprene effects that were not apparent from RNA sequencing and other methods but were apparent in the phosphoproteome include effects on chloroplast movement proteins and membrane remodelling proteins. Several receptor kinases were found to have altered phosphorylation levels. To test whether potential isoprene receptors could be identified, we used molecular dynamics simulations to test for proteins that might have strong binding to isoprene and, therefore might act as receptors. Although many Arabidopsis proteins were found to have slightly higher binding affinities than a reference set of Homo sapiens proteins, no specific receptor kinase was found to have a very high binding affinity. The changes in chloroplast movement, photosynthesis capacity and so forth, found in this work, are consistent with isoprene responses being especially useful in the upper canopy of trees.
Collapse
Affiliation(s)
- Sarathi M Weraduwage
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, USA
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA
- Departments of Biology and Biochemistry, Bishop's University, Sherbrooke, Quebec, Canada
| | - Douglas Whitten
- Research Technology Support Facility-Proteomics Core, Michigan State University, East Lansing, Michigan, USA
| | - Martin Kulke
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, USA
- School of Natural Sciences, Technische Universität München, Munich, Germany
| | - Abira Sahu
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, USA
- Plant Resilience Institute, Michigan State University, East Lansing, Michigan, USA
| | - Josh V Vermaas
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, USA
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA
| | - Thomas D Sharkey
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, USA
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA
- Plant Resilience Institute, Michigan State University, East Lansing, Michigan, USA
| |
Collapse
|
3
|
Weraduwage SM, Sahu A, Kulke M, Vermaas JV, Sharkey TD. Characterization of promoter elements of isoprene-responsive genes and the ability of isoprene to bind START domain transcription factors. PLANT DIRECT 2023; 7:e483. [PMID: 36742092 PMCID: PMC9889695 DOI: 10.1002/pld3.483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Accepted: 01/12/2023] [Indexed: 06/18/2023]
Abstract
Isoprene has recently been proposed to be a signaling molecule that can enhance tolerance of both biotic and abiotic stress. Not all plants make isoprene, but all plants tested to date respond to isoprene. We hypothesized that isoprene interacts with existing signaling pathways rather than requiring novel mechanisms for its effect on plants. We analyzed the cis-regulatory elements (CREs) in promoters of isoprene-responsive genes and the corresponding transcription factors binding these promoter elements to obtain clues about the transcription factors and other proteins involved in isoprene signaling. Promoter regions of isoprene-responsive genes were characterized using the Arabidopsis cis-regulatory element database. CREs bind ARR1, Dof, DPBF, bHLH112, GATA factors, GT-1, MYB, and WRKY transcription factors, and light-responsive elements were overrepresented in promoters of isoprene-responsive genes; CBF-, HSF-, WUS-binding motifs were underrepresented. Transcription factors corresponding to CREs overrepresented in promoters of isoprene-responsive genes were mainly those important for stress responses: drought-, salt/osmotic-, oxidative-, herbivory/wounding and pathogen-stress. More than half of the isoprene-responsive genes contained at least one binding site for TFs of the class IV (homeodomain leucine zipper) HD-ZIP family, such as GL2, ATML1, PDF2, HDG11, ATHB17. While the HD-zipper-loop-zipper (ZLZ) domain binds to the L1 box of the promoter region, a special domain called the steroidogenic acute regulatory protein-related lipid transfer, or START domain, can bind ligands such as fatty acids (e.g., linolenic and linoleic acid). We tested whether isoprene might bind in such a START domain. Molecular simulations and modeling to test interactions between isoprene and a class IV HD-ZIP family START-domain-containing protein were carried out. Without membrane penetration by the HDG11 START domain, isoprene within the lipid bilayer was inaccessible to this domain, preventing protein interactions with membrane bound isoprene. The cross-talk between isoprene-mediated signaling and other growth regulator and stress signaling pathways, in terms of common CREs and transcription factors could enhance the stability of the isoprene emission trait when it evolves in a plant but so far it has not been possible to say what how isoprene is sensed to initiate signaling responses.
Collapse
Affiliation(s)
- Sarathi M. Weraduwage
- MSU‐DOE Plant Research LaboratoryMichigan State UniversityEast LansingMichiganUSA
- Department of Biochemistry and Molecular BiologyMichigan State UniversityEast LansingMichiganUSA
- Great Lakes Bioenergy Research CenterMichigan State UniversityEast LansingMichiganUSA
| | - Abira Sahu
- MSU‐DOE Plant Research LaboratoryMichigan State UniversityEast LansingMichiganUSA
| | - Martin Kulke
- MSU‐DOE Plant Research LaboratoryMichigan State UniversityEast LansingMichiganUSA
- Department of Biochemistry and Molecular BiologyMichigan State UniversityEast LansingMichiganUSA
| | - Josh V. Vermaas
- MSU‐DOE Plant Research LaboratoryMichigan State UniversityEast LansingMichiganUSA
- Department of Biochemistry and Molecular BiologyMichigan State UniversityEast LansingMichiganUSA
| | - Thomas D. Sharkey
- MSU‐DOE Plant Research LaboratoryMichigan State UniversityEast LansingMichiganUSA
- Department of Biochemistry and Molecular BiologyMichigan State UniversityEast LansingMichiganUSA
- Great Lakes Bioenergy Research CenterMichigan State UniversityEast LansingMichiganUSA
- Plant Resilience InstituteMichigan State UniversityEast LansingMichiganUSA
| |
Collapse
|
4
|
Zhu F, Sun Y, Jadhav SS, Cheng Y, Alseekh S, Fernie AR. The Plant Metabolic Changes and the Physiological and Signaling Functions in the Responses to Abiotic Stress. Methods Mol Biol 2023; 2642:129-150. [PMID: 36944876 DOI: 10.1007/978-1-0716-3044-0_7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]
Abstract
Global climate change has altered, and will further alter, rainfall patterns and temperatures likely causing more frequent drought and heat waves, which will consequently exacerbate abiotic stresses of plants and significantly decrease the yield and quality of crops. On the one hand, the global demand for food is ever-increasing owing to the rapid increase of the human population. On the other hand, metabolic responses are one of the most important mechanisms by which plants adapt to and survive to abiotic stresses. Here we therefore summarize recent progresses including the plant primary and secondary metabolic responses to abiotic stresses and their function in plant resistance acting as antioxidants, osmoregulatory, and signaling factors, which enrich our knowledge concerning commonalities of plant metabolic responses to abiotic stresses, including their involvement in signaling processes. Finally, we discuss potential methods of metabolic fortification of crops in order to improve their abiotic stress tolerance.
Collapse
Affiliation(s)
- Feng Zhu
- National R&D Center for Citrus Preservation, Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Yuming Sun
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, China
| | - Sagar Sudam Jadhav
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Yunjiang Cheng
- National R&D Center for Citrus Preservation, Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan, China
| | - Saleh Alseekh
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
- Center of Plant Systems Biology and Biotechnology, Plovdiv, Bulgaria
| | - Alisdair R Fernie
- Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
- Center of Plant Systems Biology and Biotechnology, Plovdiv, Bulgaria.
| |
Collapse
|
5
|
Kaur S, Chowhan N, Sharma P, Rathee S, Singh HP, Batish DR. β-Pinene alleviates arsenic (As)-induced oxidative stress by modulating enzymatic antioxidant activities in roots of Oryza sativa. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2022; 229:113080. [PMID: 34929504 DOI: 10.1016/j.ecoenv.2021.113080] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 12/09/2021] [Accepted: 12/10/2021] [Indexed: 06/14/2023]
Abstract
Rice (Oryza sativa L.) is a highly consumed staple crop worldwide, but abiotic/heavy metal stresses acting on the plant cause reduction in yield and quality, thereby impacting global food security. In the present study, we examined the effect of β-pinene against Arsenic (As)-induced oxidative damage vis-à-vis regulation of activities of enzymatic antioxidants in roots of O. sativa. Effect of As (50 μM), β-pinene (10 μM; β-10) and As + β-10 treatments on root length, shoot length, As accumulation, lipid peroxidation (as malondialdehyde [MDA] content), hydrogen peroxide (H2O2) accumulation, and activities of lipoxygenase (LOX) and enzymatic antioxidants such as ascorbate peroxidase (APX), guaiacol peroxidase (GPX), glutathione reductase (GR), superoxide dismutase (SOD), and catalase (CAT) was determined. Exposure of As caused a decline in root and shoot length, and enhancement in As accumulation, lipid peroxidation, and activities of enzymatic antioxidants. However, supplementation of β-10 (i.e., As + β-10 treatments) led to an increase in root and shoot length. Treatment with As + β-10 resulted in a decline in As accumulation, H2O2 content, and MDA content; however, the effect on LOX activity was non-significant, as compared to control. Similarly, with As + β-10 treatment a reduction in the activities of APX, GPX, GR, SOD, and CAT was observed as compared with As-alone treatment. Pearson's correlation matrix exhibited strong negative correlation between reactive oxygen species (ROS) and root/shoot length, whereas a strong positive correlation was observed between antioxidant enzymes and ROS. The present study demonstrated that β-pinene significantly ameliorates As-induced oxidative stress and provides tolerance to O. sativa against As-induced toxicity, and thus offer an option of As-mitigation using environment friendly natural plant products. However, to gain insights into the function of β-pinene in modulating As-induced oxidative damage in plants, further field investigations and exploration of its mechanism of action are needed.
Collapse
Affiliation(s)
- Shalinder Kaur
- Department of Botany, Panjab University, Chandigarh 160014, India
| | - Nadia Chowhan
- Department of Botany, Panjab University, Chandigarh 160014, India
| | - Padma Sharma
- Department of Environment Studies, Panjab University, Chandigarh 160014, India
| | - Sonia Rathee
- Department of Botany, Panjab University, Chandigarh 160014, India
| | - Harminder Pal Singh
- Department of Environment Studies, Panjab University, Chandigarh 160014, India.
| | | |
Collapse
|
6
|
Khakdan F, Govahi M, Mohebi Z, Ranjbar M. Water deficit stress responses of monoterpenes and sesquiterpenes in different Iranian cultivars of basil. PHYSIOLOGIA PLANTARUM 2021; 173:896-910. [PMID: 34161632 DOI: 10.1111/ppl.13485] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/10/2020] [Accepted: 04/28/2021] [Indexed: 05/24/2023]
Abstract
Ocimum basilicum, a popular aromatic plant, contains aromatic terpenes of terpenoids with in vivo and in vitro verified cytotoxicity. Considering the characteristics and potential of its utilization, it would be attractive to reveal its regulation and biosynthesis, originally at the molecular level under water deficit stress. For this aim, for the first time, the gene encoding the enzyme involved in the end step of the MEP biosynthetic pathways (HDR) was cloned, and the accumulation ratio of linalool, germacrene D and γ-cadinene compounds as well as the expression trait of four critical genes (i.e., HDR, LinS, GerS, and GadS) was assessed under water deficit stress in three Iranian cultivars of basil. The highest value of linalool and γ-cadinene were detected for Cultivar 1 (Cult. 1) under mild stress (W1; 52.6 and 21.1%), while insignificant amounts were obtained for Cultivar 3 (Cult. 3). The germacrene D level of Cultivar 2 (Cult. 2) increased under severe and moderate water stresses as compared with mild water deficit stress. Apart from some expectation, all the studied genes demonstrated divergent transcription ratios under water deficit stress. Principal component analyses (PCA) showed that the relative water content (RWC) and HDR gene expression correlated significantly with essential oil components and gene expression in Cult. 1 and 2, which could represent an elevated demand for corresponding metabolites in the plant tissues. The present work elaborates on the regulation of the mentioned genes, and the results indicate that the production of terpenoids might be a drought stress-dependent and cultivar-dependent procedure.
Collapse
Affiliation(s)
| | - Mostafa Govahi
- Department of Nano Biotechnology, College of Biotechnology, Amol University of Special Modern Technologies, Amol, Iran
| | - Zahra Mohebi
- Department of Natural Resources, Faculty of Agricultural Sciences & Natural Resources, Razi University, Kermanshah, Iran
| | - Mojtaba Ranjbar
- Department of Microbial Biotechnology, College of Biotechnology, Amol University of Special Modern Technologies, Amol, Iran
| |
Collapse
|
7
|
Oku H, Iwai S, Uehara M, Iqbal A, Mutanda I, Inafuku M. Growth condition controls on G-93 parameters of isoprene emission from tropical trees. JOURNAL OF PLANT RESEARCH 2021; 134:1225-1242. [PMID: 34505187 DOI: 10.1007/s10265-021-01344-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 09/01/2021] [Indexed: 06/13/2023]
Abstract
Despite its major role in global isoprene emission, information on the environmental control of isoprene emission from tropical trees has remained scarce. Thus, in this study, we examined the relationship between parameters of G-93 isoprene emission formula (CT1, CT2, and α), growth temperature and light intensity, photosynthesis (ɸ, Pmax), isoprene synthase (IspS) level, and 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway metabolites using sunlit and shaded leaves of four tropical trees. The results showed that the temperature dependence of isoprene emission from shaded leaves did not differ significantly from sunlit leaves. In contrast, there was a lower saturation irradiance in shaded leaves than in sunlit leaves, the same as temperate plants. The photosynthesis rate of shaded leaves showed lower saturation irradiance, similar to the light dependence of isoprene emission. In most cases, the concentration of MEP pathway metabolites was of lower tendency in shaded leaves versus in sunlit leaves, whereas no significant difference was noted in IspS level between sunlit and shaded leaves. Correlation analysis between these parameters found that CT1 of the G-93 parameter was positively correlated with the concentration of DXP and DMADP, whereas CT2 correlated with the concentration of MEP and the average air temperature for the past 48 h. Similarly, α closely associated with the initial slope (ɸ) of photosynthesis rate, and the basal emission factor is also linked to the photon flux of past days. These results suggest that growth conditions may control the temperature dependence of isoprene emission from tropical trees via the changes in the profiles of MEP pathway metabolites, causing alteration in the parameters of the isoprene emission formula.
Collapse
Affiliation(s)
- Hirosuke Oku
- Molecular Biotechnology Group, Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, 903-0213, Japan
- United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima, 890-0065, Japan
| | - Shohei Iwai
- Faculty of Agriculture, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, 903-0213, Japan
| | - Misaki Uehara
- Faculty of Agriculture, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, 903-0213, Japan
| | - Asif Iqbal
- United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima, 890-0065, Japan
| | - Ishmael Mutanda
- Key Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, 200032, China
| | - Masashi Inafuku
- Faculty of Agriculture, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, 903-0213, Japan.
- United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima, 890-0065, Japan.
| |
Collapse
|
8
|
Niinemets Ü, Rasulov B, Talts E. CO 2 -responsiveness of leaf isoprene emission: Why do species differ? PLANT, CELL & ENVIRONMENT 2021; 44:3049-3063. [PMID: 34155641 DOI: 10.1111/pce.14131] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 06/09/2021] [Accepted: 06/13/2021] [Indexed: 06/13/2023]
Abstract
Leaf isoprene emission rate, I, decreases with increasing atmospheric CO2 concentration with major implications for global change. There is a significant interspecific variability in [CO2 ]-responsiveness of I, but the extent of this variation is unknown and its reasons are not understood. We hypothesized that the magnitude of emission reduction reflects the size and changeability of precursor pools responsible for isoprene emission (dimethylallyl diphosphate, DMADP and 2-methyl-erythritol 2,4-cyclodiphosphate, MEcDP). Changes in I and intermediate pool sizes upon increase of [CO2 ] from 400 to 1500 μmol/mol were studied in nine woody species spanning boreal to tropical ecosystems. I varied 10-fold, total substrate pool size 37-fold and the ratio of DMADP/MEcDP pool sizes 57-fold. At higher [CO2 ], I was reduced on average by 65%, but [CO2 ]-responsiveness varied an order of magnitude across species. The increase in [CO2 ] resulted in concomitant reductions in both substrate pools. The variation in [CO2 ]-responsiveness across species scaled with the reduction in pool sizes, the substrate pool size supported and the share of DMADP in total substrate pool. This study highlights a major interspecific variation in [CO2 ]-responsiveness of isoprene emission and conclusively links this variation to interspecific variability in [CO2 ] effects on substrate availability and intermediate pool size.
Collapse
Affiliation(s)
- Ülo Niinemets
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
- Estonian Academy of Sciences, Tallinn, Estonia
| | - Bahtijor Rasulov
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Eero Talts
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
| |
Collapse
|
9
|
Patrick RM, Huang XQ, Dudareva N, Li Y. Dynamic histone acetylation in floral volatile synthesis and emission in petunia flowers. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:3704-3722. [PMID: 33606881 PMCID: PMC8096599 DOI: 10.1093/jxb/erab072] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Accepted: 02/15/2021] [Indexed: 05/29/2023]
Abstract
Biosynthesis of secondary metabolites relies on primary metabolic pathways to provide precursors, energy, and cofactors, thus requiring coordinated regulation of primary and secondary metabolic networks. However, to date, it remains largely unknown how this coordination is achieved. Using Petunia hybrida flowers, which emit high levels of phenylpropanoid/benzenoid volatile organic compounds (VOCs), we uncovered genome-wide dynamic deposition of histone H3 lysine 9 acetylation (H3K9ac) during anthesis as an underlying mechanism to coordinate primary and secondary metabolic networks. The observed epigenome reprogramming is accompanied by transcriptional activation at gene loci involved in primary metabolic pathways that provide precursor phenylalanine, as well as secondary metabolic pathways to produce volatile compounds. We also observed transcriptional repression among genes involved in alternative phenylpropanoid branches that compete for metabolic precursors. We show that GNAT family histone acetyltransferase(s) (HATs) are required for the expression of genes involved in VOC biosynthesis and emission, by using chemical inhibitors of HATs, and by knocking down a specific HAT gene, ELP3, through transient RNAi. Together, our study supports that regulatory mechanisms at chromatin level may play an essential role in activating primary and secondary metabolic pathways to regulate VOC synthesis in petunia flowers.
Collapse
Affiliation(s)
- Ryan M Patrick
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907,USA
- Purdue Center for Plant Biology, Purdue University, West Lafayette, IN 47907,USA
| | - Xing-Qi Huang
- Purdue Center for Plant Biology, Purdue University, West Lafayette, IN 47907,USA
- Department of Biochemistry, Purdue University, West Lafayette, IN 47907,USA
| | - Natalia Dudareva
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907,USA
- Purdue Center for Plant Biology, Purdue University, West Lafayette, IN 47907,USA
- Department of Biochemistry, Purdue University, West Lafayette, IN 47907,USA
| | - Ying Li
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907,USA
- Purdue Center for Plant Biology, Purdue University, West Lafayette, IN 47907,USA
| |
Collapse
|
10
|
Isoprene: An Antioxidant Itself or a Molecule with Multiple Regulatory Functions in Plants? Antioxidants (Basel) 2021; 10:antiox10050684. [PMID: 33925614 PMCID: PMC8146742 DOI: 10.3390/antiox10050684] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 04/16/2021] [Accepted: 04/26/2021] [Indexed: 12/25/2022] Open
Abstract
Isoprene (C5H8) is a small lipophilic, volatile organic compound (VOC), synthesized in chloroplasts of plants through the photosynthesis-dependent 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway. Isoprene-emitting plants are better protected against thermal and oxidative stresses but only about 20% of the terrestrial plants are able to synthesize isoprene. Many studies have been performed to understand the still elusive isoprene protective mechanism. Isoprene reacts with, and quenches, many harmful reactive oxygen species (ROS) like singlet oxygen (1O2). A role for isoprene as antioxidant, made possible by its reduced state and conjugated double bonds, has been often suggested, and sometimes demonstrated. However, as isoprene is present at very low concentrations compared to other molecules, its antioxidant role is still controversial. Here we review updated evidences on the function(s) of isoprene, and outline contrasting indications on whether isoprene is an antioxidant directly scavenging ROS, or a membrane strengthener, or a modulator of genomic, proteomic and metabolomic profiles (perhaps as a secondary effect of ROS removal) eventually leading to priming of antioxidant plant defenses, or a signal of stress for neighbor plants alike other VOCs, or a hormone-like molecule, controlling the metabolic flux of other hormones made by the MEP pathway, or acting itself as a growth and development hormone.
Collapse
|
11
|
Protein expression plasticity contributes to heat and drought tolerance of date palm. Oecologia 2021; 197:903-919. [PMID: 33880635 PMCID: PMC8591023 DOI: 10.1007/s00442-021-04907-w] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Accepted: 03/23/2021] [Indexed: 11/04/2022]
Abstract
Climate change is increasing the frequency and intensity of warming and drought periods around the globe, currently representing a threat to many plant species. Understanding the resistance and resilience of plants to climate change is, therefore, urgently needed. As date palm (Phoenix dactylifera) evolved adaptation mechanisms to a xeric environment and can tolerate large diurnal and seasonal temperature fluctuations, we studied the protein expression changes in leaves, volatile organic compound emissions, and photosynthesis in response to variable growth temperatures and soil water deprivation. Plants were grown under controlled environmental conditions of simulated Saudi Arabian summer and winter climates challenged with drought stress. We show that date palm is able to counteract the harsh conditions of the Arabian Peninsula by adjusting the abundances of proteins related to the photosynthetic machinery, abiotic stress and secondary metabolism. Under summer climate and water deprivation, these adjustments included efficient protein expression response mediated by heat shock proteins and the antioxidant system to counteract reactive oxygen species formation. Proteins related to secondary metabolism were downregulated, except for the P. dactylifera isoprene synthase (PdIspS), which was strongly upregulated in response to summer climate and drought. This study reports, for the first time, the identification and functional characterization of the gene encoding for PdIspS, allowing future analysis of isoprene functions in date palm under extreme environments. Overall, the current study shows that reprogramming of the leaf protein profiles confers the date palm heat- and drought tolerance. We conclude that the protein plasticity of date palm is an important mechanism of molecular adaptation to environmental fluctuations.
Collapse
|
12
|
Source of 12C in Calvin-Benson cycle intermediates and isoprene emitted from plant leaves fed with 13CO2. Biochem J 2021; 477:3237-3252. [PMID: 32815532 DOI: 10.1042/bcj20200480] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 08/12/2020] [Accepted: 08/20/2020] [Indexed: 12/11/2022]
Abstract
Feeding 14CO2 was crucial to uncovering the path of carbon in photosynthesis. Feeding 13CO2 to photosynthesizing leaves emitting isoprene has been used to develop hypotheses about the sources of carbon for the methylerythritol 4-phosphate pathway, which makes the precursors for terpene synthesis in chloroplasts and bacteria. Both photosynthesis and isoprene studies found that products label very quickly (<10 min) up to 80-90% but the last 10-20% of labeling requires hours indicating a source of 12C during photosynthesis and isoprene emission. Furthermore, studies with isoprene showed that the proportion of slow label could vary significantly. This was interpreted as a variable contribution of carbon from sources other than the Calvin-Benson cycle (CBC) feeding the methylerythritol 4-phosphate pathway. Here, we measured the degree of label in isoprene and photosynthetic metabolites 20 min after beginning to feed 13CO2. Isoprene labeling was the same as labeling of photosynthesis intermediates. High temperature reduced the label in isoprene and photosynthesis intermediates by the same amount indicating no role for alternative carbon sources for isoprene. A model assuming glucose, fructose, and/or sucrose reenters the CBC as ribulose 5-phosphate through a cytosolic shunt involving glucose 6-phosphate dehydrogenase was consistent with the observations.
Collapse
|
13
|
Leaf isoprene emission as a trait that mediates the growth-defense tradeoff in the face of climate stress. Oecologia 2021; 197:885-902. [PMID: 33420520 DOI: 10.1007/s00442-020-04813-7] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2020] [Accepted: 12/01/2020] [Indexed: 12/27/2022]
Abstract
Plant isoprene emissions are known to contribute to abiotic stress tolerance, especially during episodes of high temperature and drought, and during cellular oxidative stress. Recent studies have shown that genetic transformations to add or remove isoprene emissions cause a cascade of cellular modifications that include known signaling pathways, and interact to remodel adaptive growth-defense tradeoffs. The most compelling evidence for isoprene signaling is found in the shikimate and phenylpropanoid pathways, which produce salicylic acid, alkaloids, tannins, anthocyanins, flavonols and other flavonoids; all of which have roles in stress tolerance and plant defense. Isoprene also influences key gene expression patterns in the terpenoid biosynthetic pathways, and the jasmonic acid, gibberellic acid and cytokinin signaling networks that have important roles in controlling inducible defense responses and influencing plant growth and development, particularly following defoliation. In this synthesis paper, using past studies of transgenic poplar, tobacco and Arabidopsis, we present the evidence for isoprene acting as a metabolite that coordinates aspects of cellular signaling, resulting in enhanced chemical defense during periods of climate stress, while minimizing costs to growth. This perspective represents a major shift in our thinking away from direct effects of isoprene, for example, by changing membrane properties or quenching ROS, to indirect effects, through changes in gene expression and protein abundances. Recognition of isoprene's role in the growth-defense tradeoff provides new perspectives on evolution of the trait, its contribution to plant adaptation and resilience, and the ecological niches in which it is most effective.
Collapse
|
14
|
Seasonal Variation of Biogenic and Anthropogenic VOCs in a Semi-Urban Area Near Sydney, Australia. ATMOSPHERE 2020. [DOI: 10.3390/atmos12010047] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
Abstract
Volatile organic compounds (VOCs) play a key role in the formation of ozone and secondary organic aerosol, the two most important air pollutants in Sydney, Australia. Despite their importance, there are few available VOC measurements in the area. In this paper, we discuss continuous GC-MS measurements of 10 selected VOCs between February (summer in the southern hemisphere) and June (winter in the southern hemisphere) of 2019 in a semi-urban area between natural eucalypt forest and the Sydney metropolitan fringe. Combined, isoprene, methacrolein, methyl-vinyl-ketone, α-pinene, p-cymene, eucalyptol, benzene, toluene xylene and tri-methylbenzene provide a reasonable representation of variability in the total biogenic VOC (BVOC) and anthropogenic VOC (AVOC) loading in the area. Seasonal changes in environmental conditions were reflected in observed BVOC concentrations, with a summer peak of 8 ppb, dropping to approximately 0.1 ppb in winter. Isoprene, and its immediate oxidation products methacrolein (MACR) and methyl-vinyl-ketone (MVK), dominated BVOC concentrations during summer and early autumn, while monoterpenes comprised the larger fraction during winter. Temperature and solar radiation drive most of the seasonal variation observed in BVOCs. Observed levels of isoprene, MACR and MVK in the atmosphere are closely related with variations in temperature and photosynthetically active radiation (PAR), but chemistry and meteorology may play a more important role for the monoterpenes. Using a nonlinear model, temperature explains 51% and PAR 38% of the isoprene, MACR and MVK variation. Eucalyptol dominated the observed monoterpene fraction (contributing ~75%), with p-cymene (20%) and α-pinene (5%) also present. AVOCs maintain an average concentration of ~0.4 ppb, with a slight decrease during autumn–winter. The low AVOC concentrations observed indicate a relatively small anthropogenic influence, generally occurring when (rare) northerly winds transport Sydney emissions to the measurement site. The site is influenced by domestic, commercial and vehicle AVOC emissions. Our observed AVOC concentrations can be explained by the seasonal changes in meteorology and the emissions in the area as listed in the NSW emissions inventory and thereby act as an independent validation of this inventory. We conclude that the variations in atmospheric composition observed during the seasons are an important variable to consider when formulating air pollution control policies over Sydney given the influence of biogenic sources during summer, autumn and winter.
Collapse
|
15
|
Sun Z, Shen Y, Niinemets Ü. Responses of isoprene emission and photochemical efficiency to severe drought combined with prolonged hot weather in hybrid Populus. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:7364-7381. [PMID: 32996573 PMCID: PMC7906789 DOI: 10.1093/jxb/eraa415] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 09/06/2020] [Indexed: 06/11/2023]
Abstract
Isoprene emissions have been considered as a protective response of plants to heat stress, but there is limited information of how prolonged heat spells affect isoprene emission capacity, particularly under the drought conditions that often accompany hot weather. Under combined long-term stresses, presence of isoprene emission could contribute to the maintenance of the precursor pool for rapid synthesis of essential isoprenoids to repair damaged components of leaf photosynthetic apparatus. We studied changes in leaf isoprene emission rate, photosynthetic characteristics, and antioxidant enzyme activities in two hybrid Populus clones, Nanlin 1388 (relatively high drought tolerance) and Nanlin 895 (relatively high thermotolerance) that were subjected to long-term (30 d) soil water stress (25% versus 90% soil field capacity) combined with a natural heat spell (day-time temperatures of 35-40 °C) that affected both control and water-stressed plants. Unexpectedly, isoprene emissions from both the clones were similar and the overall effects of drought on the emission characteristics were initially minor; however, treatment effects and clonal differences increased with time. In particular, the isoprene emission rate only increased slightly in the Nanlin 895 control plants after 15 d of treatment, whereas it decreased by more than 5-fold in all treatment × clone combinations after 30 d. The reduction in isoprene emission rate was associated with a decrease in the pool size of the isoprene precursor dimethylallyl diphosphate in all cases at 30 d after the start of treatment. Net assimilation rate, stomatal conductance, the openness of PSII centers, and the effective quantum yield all decreased, and non-photochemical quenching and catalase activity increased in both control and water-stressed plants. Contrary to the hypothesis of protection of leaf photosynthetic apparatus by isoprene, the data collectively indicated that prolonged stress affected isoprene emissions more strongly than leaf photosynthetic characteristics. This primarily reflected the depletion of isoprene precursor pools under long-term severe stress.
Collapse
Affiliation(s)
- Zhihong Sun
- School of Forestry and Bio-Technology, Zhejiang A&F University, Hangzhou, Zhejiang, China
- Zhejiang A&F University State Key Laboratory of Subtropical Silviculture, Hangzhou, Zhejiang, China
| | - Yan Shen
- School of Forestry and Bio-Technology, Zhejiang A&F University, Hangzhou, Zhejiang, China
| | - Ülo Niinemets
- School of Forestry and Bio-Technology, Zhejiang A&F University, Hangzhou, Zhejiang, China
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Kreutzwaldi, Tartu, Estonia
- Estonian Academy of Sciences, Kohtu, Tallinn, Estonia
| |
Collapse
|
16
|
Agati G, Brunetti C, Fini A, Gori A, Guidi L, Landi M, Sebastiani F, Tattini M. Are Flavonoids Effective Antioxidants in Plants? Twenty Years of Our Investigation. Antioxidants (Basel) 2020; 9:E1098. [PMID: 33182252 PMCID: PMC7695271 DOI: 10.3390/antiox9111098] [Citation(s) in RCA: 98] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Revised: 11/05/2020] [Accepted: 11/06/2020] [Indexed: 12/13/2022] Open
Abstract
Whether flavonoids play significant antioxidant roles in plants challenged by photooxidative stress of different origin has been largely debated over the last few decades. A critical review of the pertinent literature and our experimentation as well, based on a free-of-scale approach, support an important antioxidant function served by flavonoids in plants exposed to a wide range of environmental stressors, the significance of which increases with the severity of stress. On the other side, some questions need conclusive answers when the putative antioxidant functions of plant flavonoids are examined at the level of both the whole-cell and cellular organelles. This partly depends upon a conclusive, robust, and unbiased definition of "a plant antioxidant", which is still missing, and the need of considering the subcellular re-organization that occurs in plant cells in response to severe stress conditions. This likely makes our deterministic-based approach unsuitable to unveil the relevance of flavonoids as antioxidants in extremely complex biological systems, such as a plant cell exposed to an ever-changing stressful environment. This still poses open questions about how to measure the occurred antioxidant action of flavonoids. Our reasoning also evidences the need of contemporarily evaluating the changes in key primary and secondary components of the antioxidant defense network imposed by stress events of increasing severity to properly estimate the relevance of the antioxidant functions of flavonoids in an in planta situation. In turn, this calls for an in-depth analysis of the sub-cellular distribution of primary and secondary antioxidants to solve this still intricate matter.
Collapse
Affiliation(s)
- Giovanni Agati
- Institute of Applied Physics ‘Carrara’, National Research Council of Italy (CNR), Via Madonna del Piano 10, Sesto F.no, I-50019 Florence, Italy;
| | - Cecilia Brunetti
- Institute for Sustainable Plant Protection, National Research Council of Italy (CNR), Via Madonna del Piano 10, I-50019, Sesto F.no, Florence, Italy; (C.B.); (F.S.)
| | - Alessio Fini
- Department of Agriculural and Environmental Sciences - Production, Landscape, Agroenergy, University of Milan, Via Celoria 2, I-20133 Milan, Italy;
| | - Antonella Gori
- Department of Agriculture, Food, Environment and Forestry, University of Florence, Viale delle Idee 30, Sesto F.no, I-50019 Florence, Italy;
| | - Lucia Guidi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy; (L.G.); (M.L.)
| | - Marco Landi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, I-56124 Pisa, Italy; (L.G.); (M.L.)
| | - Federico Sebastiani
- Institute for Sustainable Plant Protection, National Research Council of Italy (CNR), Via Madonna del Piano 10, I-50019, Sesto F.no, Florence, Italy; (C.B.); (F.S.)
| | - Massimiliano Tattini
- Institute for Sustainable Plant Protection, National Research Council of Italy (CNR), Via Madonna del Piano 10, I-50019, Sesto F.no, Florence, Italy; (C.B.); (F.S.)
| |
Collapse
|
17
|
Pyryaeva AP, Ershov KS, Kochubei SA, Baklanov AV. Singlet Oxygen Generation via UV-A, -B, and -C Photoexcitation of Isoprene-Oxygen (C 5H 8-O 2) Encounter Complexes in the Gas Phase. J Phys Chem A 2020; 124:8469-8477. [PMID: 32986424 DOI: 10.1021/acs.jpca.0c07509] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The formation of singlet oxygen 1O2 provided by the photoexcitation of the encounter complexes of isoprene with oxygen (C5H8-O2) in the gas phase within the spectral region 253.5-355 nm has been observed at the elevated pressure of oxygen. Singlet oxygen has been detected with its NIR luminescence centered near 1.27 μm. The photogeneration of 1O2 is found to be a one-photon process. In the UV-C region (253-278 nm) the quantum yield of 1O2 is measured. This yield of 1O2 is governed mainly by photoexcitation of O2 molecules to the Herzberg III (3Δu) state via enhanced absorption by C5H8-O2 collision complexes. So excited triplet O2 gives rise to singlet oxygen because of triplet-triplet annihilation in the collisions with unexcited O2 molecules. In the UV-B (308 nm) region the appearance of 1O2 is attributed to the excitation of a double spin-flip (DSF) transition in complex C5H8-O2. In the UV-A region (355 nm) besides DSF the O2-assisted T1 ← S0 excitation of isoprene to the triplet state takes place, which is a sensitizer of 1O2 formation. The contribution of the encounter complexes C5H8-O2 to the production of singlet oxygen and to the lifetime of isoprene in the Earth's troposphere are estimated.
Collapse
Affiliation(s)
- Alexandra P Pyryaeva
- Voevodsky Institute of Chemical Kinetics and Combustion, Institutskaya Str. 3, Novosibirsk 630090, Russia.,Novosibirsk State University, Pirogova Str. 2, Novosibirsk 630090, Russia
| | - Kirill S Ershov
- Voevodsky Institute of Chemical Kinetics and Combustion, Institutskaya Str. 3, Novosibirsk 630090, Russia.,Novosibirsk State University, Pirogova Str. 2, Novosibirsk 630090, Russia
| | - Sergei A Kochubei
- Institute of Semiconductor Physics, ac. Lavrent'yev ave., 13, Novosibirsk 630090, Russia
| | - Alexey V Baklanov
- Voevodsky Institute of Chemical Kinetics and Combustion, Institutskaya Str. 3, Novosibirsk 630090, Russia.,Novosibirsk State University, Pirogova Str. 2, Novosibirsk 630090, Russia
| |
Collapse
|
18
|
Miloradovic van Doorn M, Merl-Pham J, Ghirardo A, Fink S, Polle A, Schnitzler JP, Rosenkranz M. Root isoprene formation alters lateral root development. PLANT, CELL & ENVIRONMENT 2020; 43:2207-2223. [PMID: 32495947 DOI: 10.1111/pce.13814] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 05/21/2020] [Accepted: 05/26/2020] [Indexed: 06/11/2023]
Abstract
Isoprene is a C5 volatile organic compound, which can protect aboveground plant tissue from abiotic stress such as short-term high temperatures and accumulation of reactive oxygen species (ROS). Here, we uncover new roles for isoprene in the plant belowground tissues. By analysing Populus x canescens isoprene synthase (PcISPS) promoter reporter plants, we discovered PcISPS promoter activity in certain regions of the roots including the vascular tissue, the differentiation zone and the root cap. Treatment of roots with auxin or salt increased PcISPS promoter activity at these sites, especially in the developing lateral roots (LR). Transgenic, isoprene non-emitting poplar roots revealed an accumulation of O2- in the same root regions where PcISPS promoter activity was localized. Absence of isoprene emission, moreover, increased the formation of LRs. Inhibition of NAD(P)H oxidase activity suppressed LR development, suggesting the involvement of ROS in this process. The analysis of the fine root proteome revealed a constitutive shift in the amount of several redox balance, signalling and development related proteins, such as superoxide dismutase, various peroxidases and linoleate 9S-lipoxygenase, in isoprene non-emitting poplar roots. Together our results indicate for isoprene a ROS-related function, eventually co-regulating the plant-internal signalling network and development processes in root tissue.
Collapse
Affiliation(s)
- Maja Miloradovic van Doorn
- Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany
| | - Juliane Merl-Pham
- Research Unit Protein Science, Helmholtz Zentrum München, Neuherberg, Germany
| | - Andrea Ghirardo
- Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany
| | - Siegfried Fink
- Forest Botany, Albert-Ludwigs-Universität Freiburg, Freiburg im Breisgau, Germany
| | - Andrea Polle
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, China
- Forest Botany and Tree Physiology, University of Göttingen, Göttingen, Germany
| | - Jörg-Peter Schnitzler
- Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany
| | - Maaria Rosenkranz
- Research Unit Environmental Simulation, Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany
| |
Collapse
|
19
|
Xu J, Trainotti L, Li M, Varotto C. Overexpression of Isoprene Synthase Affects ABA- and Drought-Related Gene Expression and Enhances Tolerance to Abiotic Stress. Int J Mol Sci 2020; 21:E4276. [PMID: 32560078 PMCID: PMC7352718 DOI: 10.3390/ijms21124276] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Revised: 06/10/2020] [Accepted: 06/13/2020] [Indexed: 01/08/2023] Open
Abstract
Isoprene is the most abundant single biogenic volatile compound emitted by plants. Despite the relevance of this molecule to plant abiotic resistance and its impact on global atmospheric chemistry, little is known about the details of its mechanism of action. Here, we characterized through both physiological and molecular methods the mechanisms of action of isoprene using model transgenic arabidopsis lines overexpressing a monocot isoprene synthase gene. Our results demonstrated the effect that isoprene had on ABA signaling at different tissue-specific, spatial, and temporal scales. In particular, we found that isoprene enhanced stomatal sensitivity to ABA through upregulation of RD29B signaling gene. By contrast, isoprene decreased sensitivity to ABA in germinating seeds and roots, suggesting tissue-specific mechanisms of action. In leaves, isoprene caused the downregulation of COR15A and P5CS genes, suggesting that the enhanced tolerance to water-deprivation stress observed in isoprene-emitting plants may be mediated chiefly by an enhanced membrane integrity and tolerance to osmotic stress.
Collapse
Affiliation(s)
- Jia Xu
- Department of Biodiversity and Molecular Ecology, Fondazione Edmund Mach, Research and Innovation Centre, via Mach 1, 38010 San Michele all’Adige (TN), Italy;
- Dipartimento di Biologia, Università degli Studi di Padova, viale Giuseppe Colombo, 3, 35131 Padova, Italy;
| | - Livio Trainotti
- Dipartimento di Biologia, Università degli Studi di Padova, viale Giuseppe Colombo, 3, 35131 Padova, Italy;
| | - Mingai Li
- Department of Biodiversity and Molecular Ecology, Fondazione Edmund Mach, Research and Innovation Centre, via Mach 1, 38010 San Michele all’Adige (TN), Italy;
| | - Claudio Varotto
- Department of Biodiversity and Molecular Ecology, Fondazione Edmund Mach, Research and Innovation Centre, via Mach 1, 38010 San Michele all’Adige (TN), Italy;
| |
Collapse
|
20
|
Farh MEA, Kim YJ, Abbai R, Singh P, Jung KH, Kim YJ, Yang DC. Pathogenesis strategies and regulation of ginsenosides by two species of Ilyonectria in Panax ginseng: power of speciation. J Ginseng Res 2020; 44:332-340. [PMID: 32148416 PMCID: PMC7031752 DOI: 10.1016/j.jgr.2019.02.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2017] [Revised: 01/23/2019] [Accepted: 02/13/2019] [Indexed: 11/22/2022] Open
Abstract
BACKGROUND The valuable medicinal plant Panax ginseng has high pharmaceutical efficacy because it produces ginsenosides. However, its yields decline because of a root-rot disease caused by Ilyonectria mors-panacis. Because species within Ilyonectria showed variable aggressiveness by altering ginsenoside concentrations in inoculated plants, we investigated how such infections might regulate the biosynthesis of ginsenosides and their related signaling molecules. METHODS Two-year-old ginseng seedlings were treated with I. mors-panacis and I. robusta. Roots from infected and pathogen-free plants were harvested at 4 and 16 days after inoculation. We then examined levels or/and expression of genes of ginsenosides, salicylic acid (SA), jasmonic acid (JA), and reactive oxygen species (ROS). We also checked the susceptibility of those pathogens to ROS. RESULTS Ginsenoside biosynthesis was significantly suppressed and increased in response to infection by I. mors-panacis and I. robusta, respectively. Regulation of JA was significantly higher in I. robusta-infected roots, while levels of SA and ROS were significantly higher in I. mors-panacis-infected roots. Catalase activity was significantly higher in I. robusta-infected roots followed in order by mock roots and those infected by I. mors-panacis. Moreover, I. mors-panacis was resistant to ROS compared with I. robusta. CONCLUSION Infection by the weakly aggressive I. robusta led to the upregulation of ginsenoside production and biosynthesis, probably because only a low level of ROS was induced. In contrast, the more aggressive I. mors-panacis suppressed ginsenoside biosynthesis, probably because of higher ROS levels and subsequent induction of programmed cell death pathways. Furthermore, I. mors-panacis may have increased its virulence by resisting the cytotoxicity of ROS.
Collapse
Affiliation(s)
- Mohamed El-Agamy Farh
- Graduate School of Biotechnology, College of Life Science, Kyung Hee University, Yongin, Republic of Korea
| | - Yu-Jin Kim
- Department of Oriental Medicinal Biotechnology, College of Life Sciences, Kyung Hee University, Yongin, Republic of Korea
| | - Ragavendran Abbai
- Graduate School of Biotechnology, College of Life Science, Kyung Hee University, Yongin, Republic of Korea
| | - Priyanka Singh
- Department of Oriental Medicinal Biotechnology, College of Life Sciences, Kyung Hee University, Yongin, Republic of Korea
| | - Ki-Hong Jung
- Graduate School of Biotechnology, College of Life Science, Kyung Hee University, Yongin, Republic of Korea
| | - Yeon-Ju Kim
- Graduate School of Biotechnology, College of Life Science, Kyung Hee University, Yongin, Republic of Korea
| | - Deok-Chun Yang
- Graduate School of Biotechnology, College of Life Science, Kyung Hee University, Yongin, Republic of Korea
- Department of Oriental Medicinal Biotechnology, College of Life Sciences, Kyung Hee University, Yongin, Republic of Korea
| |
Collapse
|
21
|
Ormeño E, Viros J, Mévy JP, Tonetto A, Saunier A, Bousquet-Mélou A, Fernandez C. Exogenous Isoprene Confers Physiological Benefits in a Negligible Isoprene Emitter ( Acer monspessulanum L. ) Under Water Deficit. PLANTS 2020; 9:plants9020159. [PMID: 32012939 PMCID: PMC7076702 DOI: 10.3390/plants9020159] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2019] [Revised: 01/22/2020] [Accepted: 01/24/2020] [Indexed: 01/27/2023]
Abstract
Isoprene, the main volatile released by plants, is known to protect the photosynthetic apparatus in isoprene emitters submitted to oxidative pressures caused by environmental constraints. Whether ambient isoprene contributes to protect negligible plant emitters under abiotic stress conditions is less clear, and no study has tested if ambient isoprene is beneficial during drought periods in plant species that naturally release negligible isoprene emissions. This study examines the effect of exogenous isoprene (20 ppbv) on net photosynthesis, stomatal conductance and production of H2O2 (a reactive oxygen species: ROS) in leaves of Acer monspessulanum (a negligible isoprene emitter) submitted to three watering treatments (optimal, moderate water stress and severe water stress). Results showed that A. monspessulanum exhibited a net photosynthesis increase (+30%) and a relative leaf H2O2 decrease when saplings were exposed to an enriched isoprene atmosphere compared to isoprene-free conditions under moderate water deficit. Such physiological improvement under isoprene exposure was not observed under optimal watering or severe water stress. These findings suggest that when negligible isoprene emitters are surrounded by a very high concentration of isoprene in the ambient air, some plant protection mechanism occurs under moderate water deficit probably related to protection against ROS damage eventually impeding photosynthesis drop.
Collapse
Affiliation(s)
- Elena Ormeño
- CNRS, Aix Marseille Univ, Avignon Univ, IRD, IMBE, 13331 Marseille, France; (J.V.); (J.-P.M.); (A.B.-M.); (C.F.)
- Correspondence: ; Tel.: +33-413-55-12-26
| | - Justine Viros
- CNRS, Aix Marseille Univ, Avignon Univ, IRD, IMBE, 13331 Marseille, France; (J.V.); (J.-P.M.); (A.B.-M.); (C.F.)
| | - Jean-Philippe Mévy
- CNRS, Aix Marseille Univ, Avignon Univ, IRD, IMBE, 13331 Marseille, France; (J.V.); (J.-P.M.); (A.B.-M.); (C.F.)
| | - Alain Tonetto
- Platform of analytical and technological research and imaging, FR1739, CNRS, Aix-Marseille Univ, Centrale Marseille, 13003 Marseille, France;
| | - Amélie Saunier
- Department of Environmental and Biological Sciences, University of Eastern Finland, P.O. Box 1627, 70211 Kuopio, Finland;
| | - Anne Bousquet-Mélou
- CNRS, Aix Marseille Univ, Avignon Univ, IRD, IMBE, 13331 Marseille, France; (J.V.); (J.-P.M.); (A.B.-M.); (C.F.)
| | - Catherine Fernandez
- CNRS, Aix Marseille Univ, Avignon Univ, IRD, IMBE, 13331 Marseille, France; (J.V.); (J.-P.M.); (A.B.-M.); (C.F.)
| |
Collapse
|
22
|
Khorobrykh S, Havurinne V, Mattila H, Tyystjärvi E. Oxygen and ROS in Photosynthesis. PLANTS (BASEL, SWITZERLAND) 2020; 9:E91. [PMID: 31936893 PMCID: PMC7020446 DOI: 10.3390/plants9010091] [Citation(s) in RCA: 119] [Impact Index Per Article: 29.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/27/2019] [Revised: 12/29/2019] [Accepted: 01/02/2020] [Indexed: 12/14/2022]
Abstract
Oxygen is a natural acceptor of electrons in the respiratory pathway of aerobic organisms and in many other biochemical reactions. Aerobic metabolism is always associated with the formation of reactive oxygen species (ROS). ROS may damage biomolecules but are also involved in regulatory functions of photosynthetic organisms. This review presents the main properties of ROS, the formation of ROS in the photosynthetic electron transport chain and in the stroma of chloroplasts, and ROS scavenging systems of thylakoid membrane and stroma. Effects of ROS on the photosynthetic apparatus and their roles in redox signaling are discussed.
Collapse
Affiliation(s)
| | | | | | - Esa Tyystjärvi
- Department of Biochemistry/Molecular Plant Biology, University of Turku, FI-20014 Turku, Finland or (S.K.); (V.H.); (H.M.)
| |
Collapse
|
23
|
High productivity in hybrid-poplar plantations without isoprene emission to the atmosphere. Proc Natl Acad Sci U S A 2020; 117:1596-1605. [PMID: 31907313 DOI: 10.1073/pnas.1912327117] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Hybrid-poplar tree plantations provide a source for biofuel and biomass, but they also increase forest isoprene emissions. The consequences of increased isoprene emissions include higher rates of tropospheric ozone production, increases in the lifetime of methane, and increases in atmospheric aerosol production, all of which affect the global energy budget and/or lead to the degradation of air quality. Using RNA interference (RNAi) to suppress isoprene emission, we show that this trait, which is thought to be required for the tolerance of abiotic stress, is not required for high rates of photosynthesis and woody biomass production in the agroforest plantation environment, even in areas with high levels of climatic stress. Biomass production over 4 y in plantations in Arizona and Oregon was similar among genetic lines that emitted or did not emit significant amounts of isoprene. Lines that had substantially reduced isoprene emission rates also showed decreases in flavonol pigments, which reduce oxidative damage during extremes of abiotic stress, a pattern that would be expected to amplify metabolic dysfunction in the absence of isoprene production in stress-prone climate regimes. However, compensatory increases in the expression of other proteomic components, especially those associated with the production of protective compounds, such as carotenoids and terpenoids, and the fact that most biomass is produced prior to the hottest and driest part of the growing season explain the observed pattern of high biomass production with low isoprene emission. Our results show that it is possible to reduce the deleterious influences of isoprene on the atmosphere, while sustaining woody biomass production in temperate agroforest plantations.
Collapse
|
24
|
Werner C, Fasbender L, Romek KM, Yáñez-Serrano AM, Kreuzwieser J. Heat Waves Change Plant Carbon Allocation Among Primary and Secondary Metabolism Altering CO 2 Assimilation, Respiration, and VOC Emissions. FRONTIERS IN PLANT SCIENCE 2020; 11:1242. [PMID: 32922421 PMCID: PMC7456945 DOI: 10.3389/fpls.2020.01242] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2019] [Accepted: 07/29/2020] [Indexed: 05/17/2023]
Abstract
Processes controlling plant carbon allocation among primary and secondary metabolism, i.e., carbon assimilation, respiration, and VOC synthesis are still poorly constrained, particularly regarding their response to stress. To investigate these processes, we simulated a 10-day 38°C heat wave, analysing real-time carbon allocation into primary and secondary metabolism in the Mediterranean shrub Halimium halimifolium L. We traced position-specific 13C-labeled pyruvate into daytime VOC and CO2 emissions and during light-dark transition. Net CO2 assimilation strongly declined under heat, due to three-fold higher respiration rates. Interestingly, day respiration also increased two-fold. Decarboxylation of the C1-atom of pyruvate was the main process driving daytime CO2 release, whereas the C2-moiety was not decarboxylated in the TCA cycle. Heat induced high emissions of methanol, methyl acetate, acetaldehyde as well as mono- and sesquiterpenes, particularly during the first two days. After 10-days of heat a substantial proportion of 13C-labeled pyruvate was allocated into de novo synthesis of VOCs. Thus, during extreme heat waves high respiratory losses and reduced assimilation can shift plants into a negative carbon balance. Still, plants enhanced their investment into de novo VOC synthesis despite associated metabolic CO2 losses. We conclude that heat stress re-directed the proportional flux of key metabolites into pathways of VOC biosynthesis most likely at the expense of reactions of plant primary metabolism, which might highlight their importance for stress protection.
Collapse
Affiliation(s)
- Christiane Werner
- Ecosystem Physiology, University of Freiburg, Freiburg, Germany
- *Correspondence: Christiane Werner,
| | - Lukas Fasbender
- Ecosystem Physiology, University of Freiburg, Freiburg, Germany
| | | | - Ana Maria Yáñez-Serrano
- Ecosystem Physiology, University of Freiburg, Freiburg, Germany
- Center of Ecological Research and Forest Applications (CREAF), Universitat Autònoma de Barcelona, Barcelona, Spain
- Global Ecology Unit CREAF-CSIC-UAB, Cerdanyola del Vallès, Barcelona, Spain
| | | |
Collapse
|
25
|
Yáñez-Serrano AM, Mahlau L, Fasbender L, Byron J, Williams J, Kreuzwieser J, Werner C. Heat stress increases the use of cytosolic pyruvate for isoprene biosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:5827-5838. [PMID: 31396620 PMCID: PMC6812709 DOI: 10.1093/jxb/erz353] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 07/18/2019] [Indexed: 05/28/2023]
Abstract
The increasing occurrence of heatwaves has intensified temperature stress on terrestrial vegetation. Here, we investigate how two contrasting isoprene-emitting tropical species, Ficus benjamina and Pachira aquatica, cope with heat stress and assess the role of internal plant carbon sources for isoprene biosynthesis in relation to thermotolerance. To our knowledge, this is the first study to report isoprene emissions from P. aquatica. We exposed plants to two levels of heat stress and determined the temperature response curves for isoprene and photosynthesis. To assess the use of internal C sources in isoprene biosynthesis, plants were fed with 13C position-labelled pyruvate. F. benjamina was more heat tolerant with higher constitutive isoprene emissions and stronger acclimation to higher temperatures than P. aquatica, which showed higher induced isoprene emissions at elevated temperatures. Under heat stress, both isoprene emissions and the proportion of cytosolic pyruvate allocated into isoprene synthesis increased. This represents a mechanism that P. aquatica, and to a lesser extent F. benjamina, has adopted as an immediate response to sudden increase in heat stress. However, in the long run under prolonged heat, the species with constitutive emissions (F. benjamina) was better adapted, indicating that plants that invest more carbon into protective emissions of biogenic volatile organic compounds tend to suffer less from heat stress.
Collapse
Affiliation(s)
| | - Lucas Mahlau
- Institute of Ecosystem Physiology, University Freiburg, Freiburg, Germany
| | - Lukas Fasbender
- Institute of Ecosystem Physiology, University Freiburg, Freiburg, Germany
| | - Joseph Byron
- Atmospheric Chemistry Department, Max-Planck Institute for Chemistry, Mainz, Germany
| | - Jonathan Williams
- Atmospheric Chemistry Department, Max-Planck Institute for Chemistry, Mainz, Germany
| | - Jürgen Kreuzwieser
- Institute of Ecosystem Physiology, University Freiburg, Freiburg, Germany
| | - Christiane Werner
- Institute of Ecosystem Physiology, University Freiburg, Freiburg, Germany
| |
Collapse
|
26
|
Lantz AT, Allman J, Weraduwage SM, Sharkey TD. Isoprene: New insights into the control of emission and mediation of stress tolerance by gene expression. PLANT, CELL & ENVIRONMENT 2019; 42:2808-2826. [PMID: 31350912 PMCID: PMC6788959 DOI: 10.1111/pce.13629] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2019] [Revised: 07/19/2019] [Accepted: 07/21/2019] [Indexed: 05/10/2023]
Abstract
Isoprene is a volatile compound produced in large amounts by some, but not all, plants by the enzyme isoprene synthase. Plants emit vast quantities of isoprene, with a net global output of 600 Tg per year, and typical emission rates from individual plants around 2% of net carbon assimilation. There is significant debate about whether global climate change resulting from increasing CO2 in the atmosphere will increase or decrease global isoprene emission in the future. We show evidence supporting predictions of increased isoprene emission in the future, but the effects could vary depending on the environment under consideration. For many years, isoprene was believed to have immediate, physical effects on plants such as changing membrane properties or quenching reactive oxygen species. Although observations sometimes supported these hypotheses, the effects were not always observed, and the reasons for the variability were not apparent. Although there may be some physical effects, recent studies show that isoprene has significant effects on gene expression, the proteome, and the metabolome of both emitting and nonemitting species. Consistent results are seen across species and specific treatment protocols. This review summarizes recent findings on the role and control of isoprene emission from plants.
Collapse
Affiliation(s)
- Alexandra T. Lantz
- MSU-DOE Plant Research Laboratory, Department of Biochemistry and Molecular Biology, East Lansing, MI, United States
| | - Joshua Allman
- MSU-DOE Plant Research Laboratory, Department of Biochemistry and Molecular Biology, East Lansing, MI, United States
| | - Sarathi M. Weraduwage
- MSU-DOE Plant Research Laboratory, Department of Biochemistry and Molecular Biology, East Lansing, MI, United States
| | - Thomas D. Sharkey
- MSU-DOE Plant Research Laboratory, Department of Biochemistry and Molecular Biology, East Lansing, MI, United States
- Great Lakes Bioenergy Research Center, Madison, MI, United States
- Plant Resilience Institute, Michigan State University, East Lansing, MI, United States
| |
Collapse
|
27
|
Chen J, Bi H, Yu X, Fu Y, Liao W. Influence of physiological and environmental factors on the diurnal variation in emissions of biogenic volatile compounds from Pinus tabuliformis. J Environ Sci (China) 2019; 81:102-118. [PMID: 30975314 DOI: 10.1016/j.jes.2019.01.020] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Revised: 01/23/2019] [Accepted: 01/24/2019] [Indexed: 06/09/2023]
Abstract
Biological volatile organic compounds (BVOCs) have a large influence on atmospheric environmental quality, climate change and the carbon cycle. This study assesses the composition and diurnal variation in emission rates of BVOCs from Pinus tabuliformis, using an enclosure technique. Environmental parameters (temperature and light intensity) and physiological parameters (net photosynthetic rate, Pn; stomatal conductance, gs; intercellular CO2 concentration, Ci; and transpiration rate, Tr) that may affect emission behavior were continuously monitored. The 10 most abundant compound groups emitted by P. tabuliformis were classified by gas chromatography-mass spectrometry. The dominant monoterpenoid compounds emitted were α-pinene, β-myrcene, α-farnesene and limonene. The diurnal emission rate of BVOCs changed with temperature and light intensity, with dynamic analysis of BVOCs emissions revealing that their emission rates were more affected by temperature than light. The variation in monoterpene emission rates was consistent with estimates of Pn, gs and Tr. Basal emission rates (at 30 °C,) of the main BVOCs ranged from 0.006 to 0.273 μg -1/(hr g), while the basal ER standardization coefficients ranged from 0.049 to 0.144 °C-1. Overall, these results provide a detailed reference for the effective selection and configuration of tree species to effectively prevent and control atmospheric pollution.
Collapse
Affiliation(s)
- Jungang Chen
- College of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China; Institute of Ecology, College of Urban and Environmental Sciences, and Key Laboratory for Earth Surface Processes of the Ministry of Education, Peking University, Beijing 100871, China
| | - Huaxing Bi
- College of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China; Ji County Station, Chinese National Ecosystem Research Network (CNERN), Beijing 100083, China; Key Laboratory of State Forestry Administration on Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China; Beijing Engineering Research Center of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China; Engineering Research Center of Forestry Ecological Engineering, Ministry of Education, Beijing Forestry University, Beijing 100083, China; Beijing Collaborative Innovation Center for Eco-Environmental Improvement With Forestry and Fruit Trees, 102206 Beijing, China.
| | - Xinxiao Yu
- College of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China
| | - Yanlin Fu
- College of Soil and Water Conservation, Beijing Forestry University, Beijing 100083, China
| | - Wenchao Liao
- Beijing Water Consulting Co., LTD, 100048 Beijing, China
| |
Collapse
|
28
|
Reassimilation of Leaf Internal CO2 Contributes to Isoprene Emission in the Neotropical Species Inga edulis Mart. FORESTS 2019. [DOI: 10.3390/f10060472] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Isoprene (C5H8) is a hydrocarbon gas emitted by many tree species and has been shown to protect photosynthesis under abiotic stress. Under optimal conditions for photosynthesis, ~70%–90% of carbon used for isoprene biosynthesis is produced from recently assimilated atmospheric CO2. While the contribution of alternative carbon sources that increase with leaf temperature and other stresses have been demonstrated, uncertainties remain regarding the biochemical source(s) of isoprene carbon. In this study, we investigated leaf isoprene emissions (Is) from neotropical species Inga edulis Mart. as a function of light and temperature under ambient (450 µmol m−2 s−1) and CO2-free (0 µmol m−2 s−1) atmosphere. Is under CO2-free atmosphere showed light-dependent emission patterns similar to those observed under ambient CO2, but with lower light saturation point. Leaves treated with the photosynthesis inhibitor DCMU (3-(3,4-dichlorophenyl)-1,1-dimethylurea) failed to produce detectable Is in normal light under a CO2-free atmosphere. While strong temperature-dependent Is were observed under CO2-free atmosphere in the light, dark conditions failed to produce detectable Is even at the highest temperatures studied (40 °C). Treatment of leaves with 13C-labeled sodium bicarbonate under CO2-free atmosphere resulted in Is with over 50% containing at least one 13C atom. Is under CO2-free atmosphere and standard conditions of light and leaf temperature represented 19% ± 7% of emissions under ambient CO2. The results show that the reassimilation of leaf internal CO2 contributes to Is in the neotropical species I. edulis. Through the consumption of excess photosynthetic energy, our results support a role of isoprene biosynthesis, together with photorespiration, as a key tolerance mechanism against high temperature and high light in the tropics.
Collapse
|
29
|
Zuo Z, Weraduwage SM, Lantz AT, Sanchez LM, Weise SE, Wang J, Childs KL, Sharkey TD. Isoprene Acts as a Signaling Molecule in Gene Networks Important for Stress Responses and Plant Growth. PLANT PHYSIOLOGY 2019; 180:124-152. [PMID: 30760638 PMCID: PMC6501071 DOI: 10.1104/pp.18.01391] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2018] [Accepted: 02/04/2019] [Indexed: 05/05/2023]
Abstract
Isoprene synthase converts dimethylallyl diphosphate to isoprene and appears to be necessary and sufficient to allow plants to emit isoprene at significant rates. Isoprene can protect plants from abiotic stress but is not produced naturally by all plants; for example, Arabidopsis (Arabidopsis thaliana) and tobacco (Nicotiana tabacum) do not produce isoprene. It is typically present at very low concentrations, suggesting a role as a signaling molecule; however, its exact physiological role and mechanism of action are not fully understood. We transformed Arabidopsis with a Eucalyptus globulus isoprene synthase The regulatory mechanisms of photosynthesis and isoprene emission were similar to those of native emitters, indicating that regulation of isoprene emission is not specific to isoprene-emitting species. Leaf chlorophyll and carotenoid contents were enhanced by isoprene, which also had a marked positive effect on hypocotyl, cotyledon, leaf, and inflorescence growth in Arabidopsis. By contrast, leaf and stem growth was reduced in tobacco engineered to emit isoprene. Expression of genes belonging to signaling networks or associated with specific growth regulators (e.g. gibberellic acid that promotes growth and jasmonic acid that promotes defense) and genes that lead to stress tolerance was altered by isoprene emission. Isoprene likely executes its effects on growth and stress tolerance through direct regulation of gene expression. Enhancement of jasmonic acid-mediated defense signaling by isoprene may trigger a growth-defense tradeoff leading to variations in the growth response. Our data support a role for isoprene as a signaling molecule.
Collapse
Affiliation(s)
- Zhaojiang Zuo
- School of Forestry and Biotechnology, Zhejiang Agriculture and Forestry University, Lin'an 311300, China
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824
| | - Sarathi M Weraduwage
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
| | - Alexandra T Lantz
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824
| | - Lydia M Sanchez
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824
| | - Sean E Weise
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
| | - Jie Wang
- Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824
| | - Kevin L Childs
- Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824
| | - Thomas D Sharkey
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
- Plant Resilience Institute, Michigan State University, East Lansing, Michigan 48824
| |
Collapse
|
30
|
Parveen S, Rashid MHU, Inafuku M, Iwasaki H, Oku H. Molecular regulatory mechanism of isoprene emission under short-term drought stress in the tropical tree Ficus septica. TREE PHYSIOLOGY 2019; 39:440-453. [PMID: 30445554 DOI: 10.1093/treephys/tpy123] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2018] [Revised: 09/04/2018] [Accepted: 10/08/2018] [Indexed: 06/09/2023]
Abstract
Isoprene is emitted by many plants and is thought to function as an antioxidant under stressful conditions. However, the detailed regulatory mechanism of isoprene emission in relation to the antioxidant system remains unclear. Therefore, in this study, we explored the molecular regulatory mechanism of isoprene emission under short-term drought stress in the tropical tree Ficus septica Burm.f. We found that the soil moisture content gradually decreased from 55% on Day 1 (D1) to 23% (wilting point) on D5 after withholding water for 4 days and then returning to the initial level following re-watering on D6. On D5, drought-stressed plants had more than twofold higher isoprene emission and 90.6% lower photosynthesis rates, 99.5% lower stomatal conductance and 82.3% lower transpiration rates than well-watered control plants. It was also estimated that the isoprene concentration inside the leaf greatly increased on D5 due to the increased isoprene emission rate and reduced stomatal conductance. Among the traits related to the 2-C-methyl-d-erythritol-4-phosphate (MEP) pathway, which is responsible for isoprene biosynthesis, the isoprene synthase (IspS) protein level was positively correlated with the isoprene emission rate in stressed plants. The transcripts of the antioxidant genes peroxidase 2 (POD2), POD4, copper-zinc superoxide dismutase 2 (Cu-ZnSOD2) and manganese superoxide dismutase 1 (Mn-SOD1) also increased during the drying period, while those of ascorbate peroxidase 1 (APX1) decreased. However, there was only a weak correlation between isoprene emission and antioxidant enzyme gene expression, indicating that the regulation of isoprene biosynthesis is not directly linked to the antioxidant defense network in drought-stressed F. septica. These findings suggest that the post-transcriptional regulation of IspS led to the observed change in isoprene emission rate, which enhanced the quenching of reactive oxygen species (ROS) and, in combination with the increased antioxidant enzyme activity, conferred tolerance to drought stress in this species.
Collapse
Affiliation(s)
- Shahanaz Parveen
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, Japan
- The United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima, Japan
- Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka, Bangladesh
| | - Md Harun-Ur- Rashid
- The United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima, Japan
- Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka, Bangladesh
| | - Masashi Inafuku
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, Japan
| | - Hironori Iwasaki
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, Japan
| | - Hirosuke Oku
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa, Japan
| |
Collapse
|
31
|
Mahajan P, Singh HP, Kaur S, Batish DR, Kohli RK. β-Pinene moderates Cr(VI) phytotoxicity by quenching reactive oxygen species and altering antioxidant machinery in maize. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:456-463. [PMID: 30406586 DOI: 10.1007/s11356-018-3562-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2018] [Accepted: 10/22/2018] [Indexed: 06/08/2023]
Abstract
We examined the possible role of monoterpene β-pinene in providing protection against Cr(VI) toxicity in maize (Zea mays). Treatment with β-pinene (10 μM) significantly alleviated Cr(VI) accumulation and recuperated Cr(VI) caused decline in root and coleoptile growth in maize. β-Pinene addition caused a decline in Cr(VI)-induced accumulation of superoxide anion, hydroxyl ion, hydrogen peroxide and confirmed by in-situ detection of ROS using histochemical localization. It suggested that the β-pinene quenches/neutralizes enhanced ROS generated under Cr(VI) exposure. β-Pinene also reduced Cr(VI)-induced electrolyte leakage, thereby suggesting its role in membrane stabilization. Further, β-pinene regulated the activity of scavenging enzymes, thereby suggesting a role in modulating Cr(VI)-induced oxidative damage. In conclusion, our results suggest that the addition of β-pinene has a protective role against Cr(VI) stress and provides resistance to maize against Cr(VI) toxicity.
Collapse
Affiliation(s)
- Priyanka Mahajan
- Department of Botany, Panjab University, Chandigarh, 160014, India
| | - Harminder Pal Singh
- Department of Environment Studies, Panjab University, Chandigarh, 160014, India.
| | - Shalinder Kaur
- Department of Botany, Panjab University, Chandigarh, 160014, India
| | - Daizy R Batish
- Department of Botany, Panjab University, Chandigarh, 160014, India
| | - Ravinder Kumar Kohli
- Department of Botany, Panjab University, Chandigarh, 160014, India
- Central University of Punjab, Mansa Road, Bathinda, 151001, India
| |
Collapse
|
32
|
Saunier A, Ormeño E, Havaux M, Wortham H, Ksas B, Temime-Roussel B, Blande JD, Lecareux C, Mévy JP, Bousquet-Mélou A, Gauquelin T, Fernandez C. Resistance of native oak to recurrent drought conditions simulating predicted climatic changes in the Mediterranean region. PLANT, CELL & ENVIRONMENT 2018; 41:2299-2312. [PMID: 29749622 DOI: 10.1111/pce.13331] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Accepted: 04/26/2018] [Indexed: 05/27/2023]
Abstract
The capacity of a Quercus pubescens forest to resist recurrent drought was assessed on an in situ experimental platform through the measurement of a large set of traits (ecophysiological and metabolic) studied under natural drought (ND) and amplified drought (AD) induced by partial rain exclusion. This study was performed during the third and fourth years of AD, which correspond to conditions of moderate AD in 2014 and harsher AD in 2015, respectively. Although water potential (Ψ) and net photosynthesis (Pn) were noticeably reduced under AD in 2015 compared to ND, trees showed similar growth and no oxidative stress. The absence of oxidative damage could be due to a strong accumulation of α-tocopherol, suggesting that this compound is a major component of the Q. pubescens antioxidant system. Other antioxidants were rather stable under AD in 2014, but slight changes started to be observed in 2015 (carotenoids and isoprene) due to harsher conditions. Our results indicate that Q. pubescens could be able to cope with AD, for at least 4 years, likely due to its antioxidant system. However, growth decrease was observed during the fifth year (2016) of AD, suggesting that this resistance could be threatened over longer periods of recurrent drought.
Collapse
Affiliation(s)
- Amélie Saunier
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
- Department of Environmental and Biological Sciences, University of Eastern Finland, PO Box 1627, 70211, Kuopio, Finland
| | - Elena Ormeño
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
| | - Michel Havaux
- CEA Cadarache, CNRS UMR 7265 BVME, Aix-Marseille University, Laboratoire d'Ecophysiologie Moléculaire des Plantes, 13108, Saint-Paul-lès-Durance, France
| | - Henri Wortham
- Aix-Marseille University, CNRS, LCE, Laboratoire de Chimie de l'Environnement, Marseille, France
| | - Brigitte Ksas
- CEA Cadarache, CNRS UMR 7265 BVME, Aix-Marseille University, Laboratoire d'Ecophysiologie Moléculaire des Plantes, 13108, Saint-Paul-lès-Durance, France
| | - Brice Temime-Roussel
- Aix-Marseille University, CNRS, LCE, Laboratoire de Chimie de l'Environnement, Marseille, France
| | - James D Blande
- Department of Environmental and Biological Sciences, University of Eastern Finland, PO Box 1627, 70211, Kuopio, Finland
| | - Caroline Lecareux
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
| | - Jean-Philippe Mévy
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
| | - Anne Bousquet-Mélou
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
| | - Thierry Gauquelin
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
| | - Catherine Fernandez
- Aix-Marseille University, Avignon University, CNRS, IRD, IMBE, Marseille, France
| |
Collapse
|
33
|
Barta CE, Bolander B, Bilby SR, Brown JH, Brown RN, Duryee AM, Edelman DR, Gray CE, Gossett C, Haddock AG, Helsel MM, Jones AD, Klingseis ME, Leslie K, Miles EW, Prawitz RA. In Situ Dark Adaptation Enhances the Efficiency of DNA Extraction from Mature Pin Oak (Quercus palustris) Leaves, Facilitating the Identification of Partial Sequences of the 18S rRNA and Isoprene Synthase (IspS) Genes. PLANTS (BASEL, SWITZERLAND) 2017; 6:E52. [PMID: 29073736 PMCID: PMC5750628 DOI: 10.3390/plants6040052] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Revised: 09/29/2017] [Accepted: 10/19/2017] [Indexed: 12/26/2022]
Abstract
Mature oak (Quercus spp.) leaves, although abundantly available during the plants' developmental cycle, are rarely exploited as viable sources of genomic DNA. These leaves are rich in metabolites difficult to remove during standard DNA purification, interfering with downstream molecular genetics applications. The current work assessed whether in situ dark adaptation, to deplete sugar reserves and inhibit secondary metabolite synthesis could compensate for the difficulties encountered when isolating DNA from mature leaves rich in secondary metabolites. We optimized a rapid, commercial kit based method to extract genomic DNA from dark- and light-adapted leaves. We demonstrated that in situ dark adaptation increases the yield and quality of genomic DNA obtained from mature oak leaves, yielding templates of sufficiently high quality for direct downstream applications, such as PCR amplification and gene identification. The quality of templates isolated from dark-adapted pin oak leaves particularly improved the amplification of larger fragments in our experiments. From DNA extracts prepared with our optimized method, we identified for the first time partial segments of the genes encoding 18S rRNA and isoprene synthase (IspS) from pin oak (Quercus palustris), whose full genome has not yet been sequenced.
Collapse
Affiliation(s)
- Csengele E Barta
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Bethany Bolander
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Steven R Bilby
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Jeremy H Brown
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Reid N Brown
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Alexander M Duryee
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Danielle R Edelman
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Christina E Gray
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Chandler Gossett
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Amie G Haddock
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Mackenzie M Helsel
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Alyssa D Jones
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Marissa E Klingseis
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Kalif Leslie
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Edward W Miles
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| | - Rachael A Prawitz
- Department of Biology, Missouri Western State University, 4525 Downs Drive, Agenstein-Remington Halls, St. Joseph, MO 64507, USA.
| |
Collapse
|
34
|
Fini A, Brunetti C, Loreto F, Centritto M, Ferrini F, Tattini M. Isoprene Responses and Functions in Plants Challenged by Environmental Pressures Associated to Climate Change. FRONTIERS IN PLANT SCIENCE 2017; 8:1281. [PMID: 28798754 PMCID: PMC5526906 DOI: 10.3389/fpls.2017.01281] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2017] [Accepted: 07/06/2017] [Indexed: 05/12/2023]
Abstract
The functional reasons for isoprene emission are still a matter of hot debate. It was hypothesized that isoprene biosynthesis evolved as an ancestral mechanism in plants adapted to high water availability, to cope with transient and recurrent oxidative stresses during their water-to-land transition. There is a tight association between isoprene emission and species hygrophily, suggesting that isoprene emission may be a favorable trait to cope with occasional exposure to stresses in mesic environments. The suite of morpho-anatomical traits does not allow a conservative water use in hygrophilic mesophytes challenged by the environmental pressures imposed or exacerbated by drought and heat stress. There is evidence that in stressed plants the biosynthesis of isoprene is uncoupled from photosynthesis. Because the biosynthesis of isoprene is costly, the great investment of carbon and energy into isoprene must have relevant functional reasons. Isoprene is effective in preserving the integrity of thylakoid membranes, not only through direct interaction with their lipid acyl chains, but also by up-regulating proteins associated with photosynthetic complexes and enhancing the biosynthesis of relevant membrane components, such as mono- and di-galactosyl-diacyl glycerols and unsaturated fatty acids. Isoprene may additionally protect photosynthetic membranes by scavenging reactive oxygen species. Here we explore the mode of actions and the potential significance of isoprene in the response of hygrophilic plants when challenged by severe stress conditions associated to rapid climate change in temperate climates, with special emphasis to the concomitant effect of drought and heat. We suggest that isoprene emission may be not a good estimate for its biosynthesis and concentration in severely droughted leaves, being the internal concentration of isoprene the important trait for stress protection.
Collapse
Affiliation(s)
- Alessio Fini
- Department of Agricultural and Environmental Sciences – Production, Landscape, Agroenergy, University of MilanMilan, Italy
| | - Cecilia Brunetti
- Department of Biology, Agriculture and Food Science, National Research Council of Italy, Trees and Timber InstituteSesto Fiorentino, Italy
- Department of Agrifood Production and Environmental Sciences, University of FlorenceFlorence, Italy
| | - Francesco Loreto
- Department of Biology, Agriculture and Food Science, National Research Council of ItalyRome, Italy
| | - Mauro Centritto
- Department of Biology, Agriculture and Food Science, National Research Council of Italy, Trees and Timber InstituteSesto Fiorentino, Italy
| | - Francesco Ferrini
- Department of Agrifood Production and Environmental Sciences, University of FlorenceFlorence, Italy
| | - Massimiliano Tattini
- Department of Biology, Agriculture and Food Science, National Research Council of Italy, Institute for Sustainable Plant ProtectionSesto Fiorentino, Italy
| |
Collapse
|
35
|
Yadav RK, Sangwan RS, Srivastava AK, Sangwan NS. Prolonged exposure to salt stress affects specialized metabolites-artemisinin and essential oil accumulation in Artemisia annua L.: metabolic acclimation in preferential favour of enhanced terpenoid accumulation accompanying vegetative to reproductive phase transition. PROTOPLASMA 2017; 254:505-522. [PMID: 27263081 DOI: 10.1007/s00709-016-0971-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Accepted: 03/31/2016] [Indexed: 06/05/2023]
Abstract
Artemisia annua accumulates substantial quantities of unique and highly useful antimalarial sesquiternoid artemisinin and related phytomolecules as well as its characteristic essential oil in its glandular trichomes. The phytomolecules are mainly produced in its leaves and inflorescences. Artemisia annua plants were grown under NaCl salinity (50, 100 and 200 mM) stress conditions imposed throughout the entire life cycle of the plant. Results revealed that specialized metabolites like artemisinin, arteannuin-B, artemisinic acid + dihydroartemisinic acid and essential oil accumulation were positively modulated by NaCl salinity stress. Interestingly, total content of monoterpenoids and sesquiterpenoids of essential oil was induced by NaCl salinity treatment, contrary to previous observations. Production of camphor, the major essential oil constituent was induced under the influence of treatment. The metabolic acclimation and manifestations specific to terpenoid pathway are analysed vis-a-vis vegetative to reproductive periods and control of the modulation. WRKY and CYP71AV1 play a key role in mediating the responses through metabolism in glandular trichomes. The distinctness of the salinity induced responses is discussed in light of differential mechanism of adaptation to abiotic stresses and their impact on terpenoid-specific metabolic adjustments in A. annua. Results provide potential indications of possible adaptation of A. annua under saline conditions for agrarian techno-economic benefaction.
Collapse
Affiliation(s)
- Ritesh Kumar Yadav
- Metabolic and Structural Biology Department, CSIR- Central Institute for Medicinal and Aromatic Plants (CIMAP), Lucknow, 226015, India
| | - Rajender Singh Sangwan
- Metabolic and Structural Biology Department, CSIR- Central Institute for Medicinal and Aromatic Plants (CIMAP), Lucknow, 226015, India
| | - Avadesh K Srivastava
- Metabolic and Structural Biology Department, CSIR- Central Institute for Medicinal and Aromatic Plants (CIMAP), Lucknow, 226015, India
| | - Neelam S Sangwan
- Metabolic and Structural Biology Department, CSIR- Central Institute for Medicinal and Aromatic Plants (CIMAP), Lucknow, 226015, India.
| |
Collapse
|
36
|
Monson RK, Neice AA, Trahan NA, Shiach I, McCorkel JT, Moore DJ. Interactions between temperature and intercellular CO 2
concentration in controlling leaf isoprene emission rates. PLANT, CELL & ENVIRONMENT 2016; 39:2404-2413. [PMID: 0 DOI: 10.1111/pce.12787] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2016] [Revised: 06/15/2016] [Accepted: 06/17/2016] [Indexed: 05/24/2023]
Affiliation(s)
- Russell K. Monson
- Department of Ecology and Evolutionary Biology; University of Arizona; Tucson AZ 85721 USA
- Laboratory of Tree Ring Research; University of Arizona; Tucson AZ 85721 USA
| | | | - Nicole A. Trahan
- School of Natural Resources and the Environment; University of Arizona; Tucson AZ 85721 USA
| | - Ian Shiach
- School of Natural Resources and the Environment; University of Arizona; Tucson AZ 85721 USA
| | - Joel T. McCorkel
- Biospheric Sciences Laboratory; NASA Goddard Space Flight Center; Greenbelt MD 20771 USA
| | - David J.P. Moore
- School of Natural Resources and the Environment; University of Arizona; Tucson AZ 85721 USA
| |
Collapse
|
37
|
Zeinali N, Altarawneh M, Li D, Al-Nu’airat J, Dlugogorski BZ. New Mechanistic Insights: Why Do Plants Produce Isoprene? ACS OMEGA 2016; 1:220-225. [PMID: 31457127 PMCID: PMC6640788 DOI: 10.1021/acsomega.6b00025] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2016] [Accepted: 08/04/2016] [Indexed: 05/07/2023]
Abstract
In this article, we argue that the primary role of isoprene is to remove the singlet delta oxygen (O2 1Δg) that forms inside plants by ultraviolet excitation rather than to provide heat protection or scavenge ozone, OH, or other reactive oxygen species (ROS) in the gas phase. By deploying a quantum chemical framework, we address for the first time the exact mode of isoprene reactions with O2 1Δg, the most prominent ROS that causes damage to leaves. Initial reactions of isoprene with O2 1Δg comprise its addition at the two terminal carbon atoms. The two primary open-shell adducts that appear in these reactions undergo 1,2-cycloaddition to generate methyl vinyl ketone and methacrolein, the sole products detected from in-house (i.e., inside of plants) oxidation of isoprene. Formation of other products, comprising the peroxy O-O bonds, is kinetically insignificant. Furthermore, these adducts are thermodynamically too unstable to diffuse outside of plants. Oxidation of isoprene with O2 1Δg does not produce new ROS (such as OH or HO2), supporting the well-documented role of isoprene as an effective ROS scavenger. Deploying a solvation model reduces the energy requirements for the primary pathways in the range of 10-56 kJ/mol. The present results indicate that plants attach significant value to the in-home protection against O2 1Δg by investing carbon and energy into the formation of isoprene, in spite of the appearance of the cytotoxic methyl vinyl ketone as one of the reaction products. (The same chemical species also form in unrelated gas-phase reactions involving isoprene and other ROS.) This finding explains the primary reason for the appearance of the dynamic biosphere-atmosphere exchange of methyl vinyl ketone.
Collapse
Affiliation(s)
- Nassim Zeinali
- School of Engineering and
Information Technology, Murdoch University, 90 South Street, Murdoch, Western Australia 6150, Australia
| | - Mohammednoor Altarawneh
- School of Engineering and
Information Technology, Murdoch University, 90 South Street, Murdoch, Western Australia 6150, Australia
| | - Dan Li
- School of Engineering and
Information Technology, Murdoch University, 90 South Street, Murdoch, Western Australia 6150, Australia
| | - Jomana Al-Nu’airat
- School of Engineering and
Information Technology, Murdoch University, 90 South Street, Murdoch, Western Australia 6150, Australia
| | - Bogdan Z. Dlugogorski
- School of Engineering and
Information Technology, Murdoch University, 90 South Street, Murdoch, Western Australia 6150, Australia
| |
Collapse
|
38
|
Mutanda I, Saitoh S, Inafuku M, Aoyama H, Takamine T, Satou K, Akutsu M, Teruya K, Tamotsu H, Shimoji M, Sunagawa H, Oku H. Gene expression analysis of disabled and re-induced isoprene emission by the tropical tree Ficus septica before and after cold ambient temperature exposure. TREE PHYSIOLOGY 2016; 36:873-882. [PMID: 27126228 DOI: 10.1093/treephys/tpw032] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2016] [Accepted: 03/12/2016] [Indexed: 06/05/2023]
Abstract
Isoprene is the most abundant type of nonmethane, biogenic volatile organic compound in the atmosphere, and it is produced mainly by terrestrial plants. The tropical tree species Ficus septica Burm. F. (Rosales: Moraceae) has been shown to cease isoprene emissions when exposed to temperatures of 12 °C or lower and to re-induce isoprene synthesis upon subsequent exposure to temperatures of 30 °C or higher for 24 h. To elucidate the regulation of genes underlying the disabling and then induction of isoprene emission during acclimatization to ambient temperature, we conducted gene expression analyses of F. septica plants under changing temperature using quantitative real-time polymerase chain reaction and western blotting. Transcription levels were analyzed for 17 genes that are involved in metabolic pathways potentially associated with isoprene biosynthesis, including isoprene synthase (ispS). The protein levels of ispS were also measured. Changes in transcription and protein levels of the ispS gene, but not in the other assessed genes, showed identical temporal patterns to isoprene emission capacity under the changing temperature regime. The ispS protein levels strongly and positively correlated with isoprene emission capacity (R(2) = 0.92). These results suggest that transcriptional regulation of ispS gave rise to the temporal variation in isoprene emission capacity in response to changing temperature.
Collapse
Affiliation(s)
- Ishmael Mutanda
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan; United Graduate School of Agricultural Sciences, Kagoshima University, Korimoto 1-21-24, Kagoshima 890-0065, Japan
| | - Seikoh Saitoh
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan;
| | - Masashi Inafuku
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan
| | - Hiroaki Aoyama
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan; Faculty of Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan
| | - Tomonori Takamine
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan; Graduate School of Agriculture, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan
| | - Kazuhito Satou
- Okinawa Institute of Advanced Sciences, Suzaki 5-1, Uruma, Okinawa 904-2234, Japan
| | - Masako Akutsu
- Tokai University, Toroku 9-1-1, Higashi-ku, Kumamoto 862-8652, Japan
| | - Kuniko Teruya
- Okinawa Institute of Advanced Sciences, Suzaki 5-1, Uruma, Okinawa 904-2234, Japan
| | - Hinako Tamotsu
- Okinawa Institute of Advanced Sciences, Suzaki 5-1, Uruma, Okinawa 904-2234, Japan
| | - Makiko Shimoji
- Okinawa Institute of Advanced Sciences, Suzaki 5-1, Uruma, Okinawa 904-2234, Japan
| | - Haruki Sunagawa
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan; Okinawa Prefectural Agricultural Research Center, Makabe 820, Itoman, Okinawa 901-0336, Japan
| | - Hirosuke Oku
- Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan
| |
Collapse
|
39
|
Dani KGS, Fineschi S, Michelozzi M, Loreto F. Do cytokinins, volatile isoprenoids and carotenoids synergically delay leaf senescence? PLANT, CELL & ENVIRONMENT 2016; 39:1103-11. [PMID: 26729201 DOI: 10.1111/pce.12705] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2015] [Revised: 12/06/2015] [Accepted: 12/16/2015] [Indexed: 05/09/2023]
Affiliation(s)
- Kaidala Ganesha Srikanta Dani
- Istituto per lo Studio degli Ecosistemi, Consiglio Nazionale delle Ricerche, Via Madonna del Piano 10, 50019, Sesto Fiorentino, Firenze, Italy
- Istituto di Bioscienze e Biorisorse, Consiglio Nazionale delle Ricerche, Via Madonna del Piano 10, 50019, Sesto Fiorentino, Firenze, Italy
- Department of Biological Sciences, Macquarie University, North Ryde, Sydney, 2109, New South Wales, Australia
| | - Silvia Fineschi
- Istituto per la Protezione Sostenibile delle Piante, Consiglio Nazionale delle Ricerche, Via Madonna del Piano 10, 50019, Sesto Fiorentino, Firenze, Italy
| | - Marco Michelozzi
- Istituto di Bioscienze e Biorisorse, Consiglio Nazionale delle Ricerche, Via Madonna del Piano 10, 50019, Sesto Fiorentino, Firenze, Italy
| | - Francesco Loreto
- Dipartimento di Scienze Bio-Agroalimentari, Consiglio Nazionale delle Ricerche, Piazzale Aldo Moro 7, 00185, Roma, Italy
| |
Collapse
|
40
|
Vanzo E, Merl-Pham J, Velikova V, Ghirardo A, Lindermayr C, Hauck SM, Bernhardt J, Riedel K, Durner J, Schnitzler JP. Modulation of Protein S-Nitrosylation by Isoprene Emission in Poplar. PLANT PHYSIOLOGY 2016; 170:1945-61. [PMID: 26850277 PMCID: PMC4825136 DOI: 10.1104/pp.15.01842] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Accepted: 02/04/2016] [Indexed: 05/18/2023]
Abstract
Researchers have been examining the biological function(s) of isoprene in isoprene-emitting (IE) species for two decades. There is overwhelming evidence that leaf-internal isoprene increases the thermotolerance of plants and protects them against oxidative stress, thus mitigating a wide range of abiotic stresses. However, the mechanisms of abiotic stress mitigation by isoprene are still under debate. Here, we assessed the impact of isoprene on the emission of nitric oxide (NO) and the S-nitroso-proteome of IE and non-isoprene-emitting (NE) gray poplar (Populus × canescens) after acute ozone fumigation. The short-term oxidative stress induced a rapid and strong emission of NO in NE compared with IE genotypes. Whereas IE and NE plants exhibited under nonstressful conditions only slight differences in their S-nitrosylation pattern, the in vivo S-nitroso-proteome of the NE genotype was more susceptible to ozone-induced changes compared with the IE plants. The results suggest that the nitrosative pressure (NO burst) is higher in NE plants, underlining the proposed molecular dialogue between isoprene and the free radical NO Proteins belonging to the photosynthetic light and dark reactions, the tricarboxylic acid cycle, protein metabolism, and redox regulation exhibited increased S-nitrosylation in NE samples compared with IE plants upon oxidative stress. Because the posttranslational modification of proteins via S-nitrosylation often impacts enzymatic activities, our data suggest that isoprene indirectly regulates the production of reactive oxygen species (ROS) via the control of the S-nitrosylation level of ROS-metabolizing enzymes, thus modulating the extent and velocity at which the ROS and NO signaling molecules are generated within a plant cell.
Collapse
Affiliation(s)
- Elisa Vanzo
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Juliane Merl-Pham
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Violeta Velikova
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Andrea Ghirardo
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Christian Lindermayr
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Stefanie M Hauck
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Jörg Bernhardt
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Katharina Riedel
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Jörg Durner
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| | - Jörg-Peter Schnitzler
- Helmholtz Zentrum München, Research Unit Environmental Simulation (E.V., V.V., A.G., J.-P.S.), Institute of Biochemical Plant Pathology (C.L., J.D.), and Research Unit Protein Science (J.M.-P., S.M.H.), D-85764 Neuherberg, Germany;Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria (V.V.); andInstitute for Microbiology, Ernst-Moritz-Arndt University, 17487 Greifswald, Germany (J.B., K.R.)
| |
Collapse
|
41
|
Park KY, Kim EY, Seo YS, Kim WT. Constitutive expression of CaPLA1 conferred enhanced growth and grain yield in transgenic rice plants. PLANT MOLECULAR BIOLOGY 2016; 90:517-32. [PMID: 26803502 DOI: 10.1007/s11103-016-0440-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2015] [Accepted: 01/13/2016] [Indexed: 05/13/2023]
Abstract
Phospholipids are not only important components of cell membranes, but participate in diverse processes in higher plants. In this study, we generated Capsicum annuum phospholipiase A1 (CaPLA1) overexpressing transgenic rice (Oryza sativa L.) plants under the control of the maize ubiquitin promoter. The T4 CaPLA1-overexpressing rice plants (Ubi:CaPLA1) had a higher root:shoot mass ratio than the wild-type plants in the vegetative stage. Leaf epidermal cells from transgenic plants had more cells than wild-type plants. Genes that code for cyclin and lipid metabolic enzymes were up-regulated in the transgenic lines. When grown under typical paddy field conditions, the transgenic plants produced more tillers, longer panicles and more branches per panicle than the wild-type plants, all of which resulted in greater grain yield. Microarray analysis suggests that gene expressions that are related with cell proliferation, lipid metabolism, and redox state were widely altered in CaPLA1-overexpressing transgenic rice plants. Ubi:CaPLA1 plants had a reduced membrane peroxidation state, as determined by malondialdehyde and conjugated diene levels and higher peroxidase activity than wild-type rice plants. Furthermore, three isoprenoid synthetic genes encoding terpenoid synthase, hydroxysteroid dehydrogenase and 3-hydroxy-3-methyl-glutaryl-CoA reductase were up-regulated in CaPLA1-overexpressing plants. We suggest that constitutive expression of CaPLA1 conferred increased grain yield with enhanced growth in transgenic rice plants by alteration of gene activities related with cell proliferation, lipid metabolism, membrane peroxidation state and isoprenoid biosynthesis.
Collapse
Affiliation(s)
- Ki Youl Park
- Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-749, Korea
| | - Eun Yu Kim
- Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-749, Korea
| | - Young Sam Seo
- Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-749, Korea
- Research Institute, Korea Ginseng Corp., Daejeon, 305-805, Korea
| | - Woo Taek Kim
- Department of Systems Biology, College of Life Science and Biotechnology, Yonsei University, Seoul, 120-749, Korea.
| |
Collapse
|
42
|
Yuan H, Cheung CYM, Poolman MG, Hilbers PAJ, van Riel NAW. A genome-scale metabolic network reconstruction of tomato (Solanum lycopersicum L.) and its application to photorespiratory metabolism. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2016; 85:289-304. [PMID: 26576489 DOI: 10.1111/tpj.13075] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2015] [Revised: 11/01/2015] [Accepted: 11/03/2015] [Indexed: 05/09/2023]
Abstract
Tomato (Solanum lycopersicum L.) has been studied extensively due to its high economic value in the market, and high content in health-promoting antioxidant compounds. Tomato is also considered as an excellent model organism for studying the development and metabolism of fleshy fruits. However, the growth, yield and fruit quality of tomatoes can be affected by drought stress, a common abiotic stress for tomato. To investigate the potential metabolic response of tomato plants to drought, we reconstructed iHY3410, a genome-scale metabolic model of tomato leaf, and used this metabolic network to simulate tomato leaf metabolism. The resulting model includes 3410 genes and 2143 biochemical and transport reactions distributed across five intracellular organelles including cytosol, plastid, mitochondrion, peroxisome and vacuole. The model successfully described the known metabolic behaviour of tomato leaf under heterotrophic and phototrophic conditions. The in silico investigation of the metabolic characteristics for photorespiration and other relevant metabolic processes under drought stress suggested that: (i) the flux distributions through the mevalonate (MVA) pathway under drought were distinct from that under normal conditions; and (ii) the changes in fluxes through core metabolic pathways with varying flux ratio of RubisCO carboxylase to oxygenase may contribute to the adaptive stress response of plants. In addition, we improved on previous studies of reaction essentiality analysis for leaf metabolism by including potential alternative routes for compensating reaction knockouts. Altogether, the genome-scale model provides a sound framework for investigating tomato metabolism and gives valuable insights into the functional consequences of abiotic stresses.
Collapse
Affiliation(s)
- Huili Yuan
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
| | | | - Mark G Poolman
- Cell Systems Modelling Group, Department of Biomedical and Medical Science, Oxford Brookes University, Oxford, UK
| | - Peter A J Hilbers
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
- Institute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, The Netherlands
| | - Natal A W van Riel
- Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
- Institute for Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, The Netherlands
| |
Collapse
|
43
|
Lahr EC, Schade GW, Crossett CC, Watson MR. Photosynthesis and isoprene emission from trees along an urban-rural gradient in Texas. GLOBAL CHANGE BIOLOGY 2015; 21:4221-36. [PMID: 26111255 DOI: 10.1111/gcb.13010] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2015] [Accepted: 05/18/2015] [Indexed: 05/26/2023]
Abstract
Isoprene emission is an important mechanism for improving the thermotolerance of plant photosystems as temperatures increase. In this study, we measured photosynthesis and isoprene emission in trees along an urban-rural gradient that serves as a proxy for climate change, to understand daily and seasonal responses to changes in temperature and other environmental variables. Leaf-level gas exchange and basal isoprene emission of post oak (Quercus stellata) and sweet gum (Liquidambar styraciflua) were recorded at regular intervals over an entire growing season at urban, suburban, and rural sites in eastern Texas. In addition, the temperature and atmospheric carbon dioxide concentration experienced by leaves were experimentally manipulated in spring, early summer, and late summer. We found that trees experienced lower stomatal conductance and photosynthesis and higher isoprene emission, at the urban and suburban sites compared to the rural site. Path analysis indicated a daily positive effect of isoprene emission on photosynthesis, but unexpectedly, higher isoprene emission from urban trees was not associated with improved photosynthesis as temperatures increased during the growing season. Furthermore, urban trees experienced relatively higher isoprene emission at high CO2 concentrations, while isoprene emission was suppressed at the other sites. These results suggest that isoprene emission may be less beneficial in urban, and potentially future, environmental conditions, particularly if higher temperatures override the suppressive effects of high CO2 on isoprene emission. These are important considerations for modeling future biosphere-atmosphere interactions and for understanding tree physiological responses to climate change.
Collapse
Affiliation(s)
- Eleanor C Lahr
- Department of Atmospheric Sciences, Texas A&M University, College Station, TX, 77840, USA
| | - Gunnar W Schade
- Department of Atmospheric Sciences, Texas A&M University, College Station, TX, 77840, USA
| | - Caitlin C Crossett
- Department of Geoscience, Hobart and William Smith Colleges, Geneva, NY, 14456, USA
| | - Matthew R Watson
- Department of Atmospheric Sciences, Texas A&M University, College Station, TX, 77840, USA
| |
Collapse
|
44
|
Concentration of isoprene in artificial and thylakoid membranes. J Bioenerg Biomembr 2015; 47:419-29. [DOI: 10.1007/s10863-015-9625-9] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2015] [Accepted: 09/02/2015] [Indexed: 12/18/2022]
|
45
|
Lantz AT, Cardiello JF, Gee TA, Richards MG, Rosenstiel TN, Fisher AJ. Biochemical characterization of an isoprene synthase from Campylopus introflexus (heath star moss). PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2015; 94:209-15. [PMID: 26113160 DOI: 10.1016/j.plaphy.2015.06.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2015] [Revised: 05/29/2015] [Accepted: 06/08/2015] [Indexed: 05/25/2023]
Abstract
Each year, plants emit terragram quantities of the reactive hydrocarbon isoprene (2-methyl-1,3-butadiene) into the earth's atmosphere. In isoprene-emitting plants, the enzyme isoprene synthase (ISPS) catalyzes the production of isoprene from the isoprenoid intermediate dimethylallyl diphosphate (DMADP). While isoprene is emitted from all major classes of land plants, to date ISPSs from angiosperms only have been characterized. Here, we report the identification and initial biochemical characterization of a DMADP-dependent ISPS from the isoprene-emitting bryophyte Campylopus introflexus (heath star moss). The partially-purified C. introflexus ISPS (CiISPS) exhibited a Km for DMADP of 0.37 ± 0.28 mM, a pH optimum of 8.6 ± 0.5, and a temperature optimum of 40 ± 3 °C in vitro. Like ISPSs from angiosperms, the CiISPS required the presence of a divalent cation. However, unlike angiosperm ISPSs, the CiISPS utilized Mn(2+) preferentially over Mg(2+). Efforts are currently underway in our laboratory to further purify the CiISPS and clone the cDNA sequence encoding this novel enzyme. Our discovery of the first bryophyte ISPS paves the way for future studies concerning the evolutionary origins of isoprene emission in land plants and may help generate new bryophyte model systems for physiological and biochemical research on plant isoprene function.
Collapse
Affiliation(s)
- Alexandra T Lantz
- Department of Chemistry, Willamette University, Salem, OR 97301, USA.
| | | | - Taylor A Gee
- Department of Chemistry, Willamette University, Salem, OR 97301, USA
| | | | - Todd N Rosenstiel
- Department of Biology, Portland State University, Portland, OR 97207, USA.
| | - Alison J Fisher
- Department of Chemistry, Willamette University, Salem, OR 97301, USA.
| |
Collapse
|
46
|
Oku H, Inafuku M, Ishikawa T, Takamine T, Ishmael M, Fukuta M. Molecular cloning and biochemical characterization of isoprene synthases from the tropical trees Ficus virgata, Ficus septica, and Casuarina equisetifolia. JOURNAL OF PLANT RESEARCH 2015; 128:849-61. [PMID: 26081976 DOI: 10.1007/s10265-015-0740-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2014] [Accepted: 04/30/2015] [Indexed: 05/25/2023]
Abstract
Three isoprene synthase (IspS) cDNA clones have been isolated from tropical trees (Ficus septica, F. virgata, and Casuarina equisetifolia), and their enzyme properties have been compared with those of Populus alba IspS. Phylogenetic analysis of the deduced amino acid sequences with known monoterpene synthase resolved IspS from F. septica and F. virgata and other IspSs in a clade together with TPS-b clade I, whereas IspS from C. equisetifolia was within another clade, sister to TPS-b clade II. The optimum reaction temperature was 40 °C for the IspSs isolated from the tropical trees, and 45 °C for P. alba IspS. The optimum pH of the IspSs from the tropical trees peaked between pH 8 and pH10 contrasting with the rather broad optimum pH (7.5-10.5) of P. alba IspS. IspSs from F. septica and F. virgata were activated solely by Mg(2+), whereas IspS from C. equisetifolia was dependent more on Mn(2+) than on Mg(2+). Michaelis constant (Km) values of IspSs from tropical trees were lower than that of P. alba IspS. Analysis of inter fragment interaction energy of IspS-substrate complex model and crystal structure of bornyl diphosphate synthase (1N20) found that the coordination geometry of amino acids with higher attraction force is similar at the active site of C. equisetifolia IspS and bornyl diphosphate synthase. These observations suggest the occurrence of another group of IspSs in TPS-b subfamily and extend the knowledge on biochemical regulatory mechanism of isoprene emission from tropical trees.
Collapse
Affiliation(s)
- Hirosuke Oku
- Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Okinawa, 903-0213, Japan,
| | | | | | | | | | | |
Collapse
|
47
|
Vanzo E, Jud W, Li Z, Albert A, Domagalska MA, Ghirardo A, Niederbacher B, Frenzel J, Beemster GTS, Asard H, Rennenberg H, Sharkey TD, Hansel A, Schnitzler JP. Facing the Future: Effects of Short-Term Climate Extremes on Isoprene-Emitting and Nonemitting Poplar. PLANT PHYSIOLOGY 2015; 169:560-75. [PMID: 26162427 PMCID: PMC4577423 DOI: 10.1104/pp.15.00871] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2015] [Accepted: 07/10/2015] [Indexed: 05/04/2023]
Abstract
Isoprene emissions from poplar (Populus spp.) plantations can influence atmospheric chemistry and regional climate. These emissions respond strongly to temperature, [CO2], and drought, but the superimposed effect of these three climate change factors are, for the most part, unknown. Performing predicted climate change scenario simulations (periodic and chronic heat and drought spells [HDSs] applied under elevated [CO2]), we analyzed volatile organic compound emissions, photosynthetic performance, leaf growth, and overall carbon (C) gain of poplar genotypes emitting (IE) and nonemitting (NE) isoprene. We aimed (1) to evaluate the proposed beneficial effect of isoprene emission on plant stress mitigation and recovery capacity and (2) to estimate the cumulative net C gain under the projected future climate. During HDSs, the chloroplastidic electron transport rate of NE plants became impaired, while IE plants maintained high values similar to unstressed controls. During recovery from HDS episodes, IE plants reached higher daily net CO2 assimilation rates compared with NE genotypes. Irrespective of the genotype, plants undergoing chronic HDSs showed the lowest cumulative C gain. Under control conditions simulating ambient [CO2], the C gain was lower in the IE plants than in the NE plants. In summary, the data on the overall C gain and plant growth suggest that the beneficial function of isoprene emission in poplar might be of minor importance to mitigate predicted short-term climate extremes under elevated [CO2]. Moreover, we demonstrate that an analysis of the canopy-scale dynamics of isoprene emission and photosynthetic performance under multiple stresses is essential to understand the overall performance under proposed future conditions.
Collapse
Affiliation(s)
- Elisa Vanzo
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Werner Jud
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Ziru Li
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Andreas Albert
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Malgorzata A Domagalska
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Andrea Ghirardo
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Bishu Niederbacher
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Juliane Frenzel
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Gerrit T S Beemster
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Han Asard
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Heinz Rennenberg
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Thomas D Sharkey
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Armin Hansel
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| | - Jörg-Peter Schnitzler
- Helmholtz Zentrum München, Research Unit Environmental Simulation at the Institute of Biochemical Plant Pathology, 85764 Neuherberg, Germany (E.V., A.A., A.G., B.N., J.-P.S.);Institute for Ion Physics and Applied Physics, University of Innsbruck, 6020 Innsbruck, Austria (W.J., A.H.);Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (Z.L., T.D.S.);Laboratory for Molecular Plant Physiology and Biotechnology, Department of Biology, University of Antwerp, 2020 Antwerp, Belgium (M.A.D., G.T.S.B., H.A.); andInstitute of Forest Sciences, University of Freiburg, 79110 Freiburg, Germany (J.F., H.R.)
| |
Collapse
|
48
|
Abstract
Background Terpenoids are abundant in the foliage of Eucalyptus, providing the characteristic smell as well as being valuable economically and influencing ecological interactions. Quantitative and qualitative inter- and intra- specific variation of terpenes is common in eucalypts. Results The genome sequences of Eucalyptus grandis and E. globulus were mined for terpene synthase genes (TPS) and compared to other plant species. We investigated the relative expression of TPS in seven plant tissues and functionally characterized five TPS genes from E. grandis. Compared to other sequenced plant genomes, Eucalyptus grandis has the largest number of putative functional TPS genes of any sequenced plant. We discovered 113 and 106 putative functional TPS genes in E. grandis and E. globulus, respectively. All but one TPS from E. grandis were expressed in at least one of seven plant tissues examined. Genomic clusters of up to 20 genes were identified. Many TPS are expressed in tissues other than leaves which invites a re-evaluation of the function of terpenes in Eucalyptus. Conclusions Our data indicate that terpenes in Eucalyptus may play a wider role in biotic and abiotic interactions than previously thought. Tissue specific expression is common and the possibility of stress induction needs further investigation. Phylogenetic comparison of the two investigated Eucalyptus species gives insight about recent evolution of different clades within the TPS gene family. While the majority of TPS genes occur in orthologous pairs some clades show evidence of recent gene duplication, as well as loss of function. Electronic supplementary material The online version of this article (doi:10.1186/s12864-015-1598-x) contains supplementary material, which is available to authorized users.
Collapse
|
49
|
Külheim C, Padovan A, Hefer C, Krause ST, Köllner TG, Myburg AA, Degenhardt J, Foley WJ. The Eucalyptus terpene synthase gene family. BMC Genomics 2015. [PMID: 26062733 DOI: 10.1186/s.12864-015-1598] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2023] Open
Abstract
BACKGROUND Terpenoids are abundant in the foliage of Eucalyptus, providing the characteristic smell as well as being valuable economically and influencing ecological interactions. Quantitative and qualitative inter- and intra- specific variation of terpenes is common in eucalypts. RESULTS The genome sequences of Eucalyptus grandis and E. globulus were mined for terpene synthase genes (TPS) and compared to other plant species. We investigated the relative expression of TPS in seven plant tissues and functionally characterized five TPS genes from E. grandis. Compared to other sequenced plant genomes, Eucalyptus grandis has the largest number of putative functional TPS genes of any sequenced plant. We discovered 113 and 106 putative functional TPS genes in E. grandis and E. globulus, respectively. All but one TPS from E. grandis were expressed in at least one of seven plant tissues examined. Genomic clusters of up to 20 genes were identified. Many TPS are expressed in tissues other than leaves which invites a re-evaluation of the function of terpenes in Eucalyptus. CONCLUSIONS Our data indicate that terpenes in Eucalyptus may play a wider role in biotic and abiotic interactions than previously thought. Tissue specific expression is common and the possibility of stress induction needs further investigation. Phylogenetic comparison of the two investigated Eucalyptus species gives insight about recent evolution of different clades within the TPS gene family. While the majority of TPS genes occur in orthologous pairs some clades show evidence of recent gene duplication, as well as loss of function.
Collapse
Affiliation(s)
- Carsten Külheim
- Research School of Biology, College of Medicine, Biology and the Environment, Australian National University, Canberra, 0200, Australia.
| | - Amanda Padovan
- Research School of Biology, College of Medicine, Biology and the Environment, Australian National University, Canberra, 0200, Australia.
| | - Charles Hefer
- Department of Botany, University of British Columbia, Vancouver, BC, V6T1Z4, Canada.
| | - Sandra T Krause
- Institut für Pharmazie, Martin-Luther Universität Halle-Wittenberg, 06120, Halle, (Saale), Germany.
| | - Tobias G Köllner
- Department of Biochemistry, Max Planck Institute for Chemical Ecology, 07745, Jena, Germany.
| | - Alexander A Myburg
- Department of Genetics, Forestry and Agricultural Biotechnology Institute, Private Bag X20, Pretoria, 0028, South Africa.
| | - Jörg Degenhardt
- Institut für Pharmazie, Martin-Luther Universität Halle-Wittenberg, 06120, Halle, (Saale), Germany.
| | - William J Foley
- Research School of Biology, College of Medicine, Biology and the Environment, Australian National University, Canberra, 0200, Australia.
| |
Collapse
|
50
|
Palmer-Young EC, Veit D, Gershenzon J, Schuman MC. The Sesquiterpenes(E)-ß-Farnesene and (E)-α-Bergamotene Quench Ozone but Fail to Protect the Wild Tobacco Nicotiana attenuata from Ozone, UVB, and Drought Stresses. PLoS One 2015; 10:e0127296. [PMID: 26030663 PMCID: PMC4452144 DOI: 10.1371/journal.pone.0127296] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2014] [Accepted: 04/14/2015] [Indexed: 11/29/2022] Open
Abstract
Among the terpenes, isoprene (C5) and monoterpene hydrocarbons (C10) have been shown to ameliorate abiotic stress in a number of plant species via two proposed mechanisms: membrane stabilization and direct antioxidant effects. Sesquiterpene hydrocarbons (C15) not only share the structural properties thought to lend protective qualities to isoprene and monoterpene hydrocarbons, but also react rapidly with ozone, suggesting that sesquiterpenes may similarly enhance tolerance of abiotic stresses. To test whether sesquiterpenes protect plants against ozone, UVB light, or drought, we used transgenic lines of the wild tobacco Nicotiana attenuata. The transgenic plants expressed a maize terpene synthase gene (ZmTPS10) which produced a blend of (E)-ß-farnesene and (E)-α-bergamotene, or a point mutant of the same gene (ZmTPS10M) which produced (E)-ß-farnesene alone,. (E)-ß-farnesene exerted a local, external, and transient ozone-quenching effect in ozone-fumigated chambers, but we found no evidence that enhanced sesquiterpene production by the plant inhibited oxidative damage, or maintained photosynthetic function or plant fitness under acute or chronic stress. Although the sesquiterpenes (E)-ß-farnesene and (E)-α-bergamotene might confer benefits under intermittent heat stress, which was not tested, any roles in relieving abiotic stress may be secondary to their previously demonstrated functions in biotic interactions.
Collapse
Affiliation(s)
- Evan C. Palmer-Young
- Department of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Daniel Veit
- Technical Service, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Jonathan Gershenzon
- Department of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Meredith C. Schuman
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Jena, Germany
| |
Collapse
|