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Paul A, Mondal S, Chakraborty K, Biswas AK. Moving forward to understand the alteration of physiological mechanism by seed priming with different halo-agents under salt stress. PLANT MOLECULAR BIOLOGY 2024; 114:24. [PMID: 38457044 DOI: 10.1007/s11103-024-01425-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Accepted: 01/30/2024] [Indexed: 03/09/2024]
Abstract
Soil salinity hampers the survival and productivity of crops. To minimize salt-associated damages in plant, better salt management practices in agriculture have become a prerequisite. Seed priming with different halo-agents is a technique, which improves the primed plant's endurance to tackle sodium. Salt tolerance is achieved in tolerant plants through fundamental physiological mechanisms- ion-exclusion and tissue tolerance, and salt-tolerant plants may (Na+ accumulators) or may not (Na+ excluders) allow sodium movement to leaves. While Na+ excluders depend on ion exclusion in roots, Na+ accumulators are proficient Na+ managers that can compartmentalize Na+ in leaves and use them beneficially as inexpensive osmoticum. Salt-sensitive plants are Na+ accumulators, but their inherent tissue tolerance ability and ion-exclusion process are insufficient for tolerance. Seed priming with different halo-agents aids in 'rewiring' of the salt tolerance mechanisms of plants. The resetting of the salt tolerance mechanism is not universal for every halo-agent and might vary with halo-agents. Here, we review the physiological mechanisms that different halo-agents target to confer enhanced salt tolerance in primed plants. Calcium and potassium-specific halo-agents trigger Na+ exclusion in roots, thus ensuring a low amount of Na+ in leaves. In contrast, Na+-specific priming agents favour processes for Na+ inclusion in leaves, improve plant tissue tolerance or vacuolar sequestration, and provide the greatest benefit to salt-sensitive and sodium accumulating plants. Overall, this review will help to understand the underlying mechanism behind plant's inherent nature towards salt management and its amelioration with different halo-agents, which helps to optimize crop stress performance.
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Affiliation(s)
- Alivia Paul
- Plant Physiology and Biochemistry Laboratory, Department of Botany, CAS, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
- Cell Biology Laboratory, Department of Botany, CAS, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
| | - Subhankar Mondal
- Crop Physiology and Biochemistry Division, ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India
- Department of Botany, Utkal University, Vani Vihar, Bhubaneswar, Odisha, 751004, India
| | - Koushik Chakraborty
- Crop Physiology and Biochemistry Division, ICAR-National Rice Research Institute, Cuttack, Odisha, 753006, India
| | - Asok K Biswas
- Plant Physiology and Biochemistry Laboratory, Department of Botany, CAS, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India.
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Chen X, Zhao C, Yun P, Yu M, Zhou M, Chen ZH, Shabala S. Climate-resilient crops: Lessons from xerophytes. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2024; 117:1815-1835. [PMID: 37967090 DOI: 10.1111/tpj.16549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 10/30/2023] [Accepted: 11/05/2023] [Indexed: 11/17/2023]
Abstract
Developing climate-resilient crops is critical for future food security and sustainable agriculture under current climate scenarios. Of specific importance are drought and soil salinity. Tolerance traits to these stresses are highly complex, and the progress in improving crop tolerance is too slow to cope with the growing demand in food production unless a major paradigm shift in crop breeding occurs. In this work, we combined bioinformatics and physiological approaches to compare some of the key traits that may differentiate between xerophytes (naturally drought-tolerant plants) and mesophytes (to which the majority of the crops belong). We show that both xerophytes and salt-tolerant mesophytes have a much larger number of copies in key gene families conferring some of the key traits related to plant osmotic adjustment, abscisic acid (ABA) sensing and signalling, and stomata development. We show that drought and salt-tolerant species have (i) higher reliance on Na for osmotic adjustment via more diversified and efficient operation of Na+ /H+ tonoplast exchangers (NHXs) and vacuolar H+ - pyrophosphatase (VPPases); (ii) fewer and faster stomata; (iii) intrinsically lower ABA content; (iv) altered structure of pyrabactin resistance/pyrabactin resistance-like (PYR/PYL) ABA receptors; and (v) higher number of gene copies for protein phosphatase 2C (PP2C) and sucrose non-fermenting 1 (SNF1)-related protein kinase 2/open stomata 1 (SnRK2/OST1) ABA signalling components. We also show that the past trends in crop breeding for Na+ exclusion to improve salinity stress tolerance are counterproductive and compromise their drought tolerance. Incorporating these genetic insights into breeding practices could pave the way for more drought-tolerant and salt-resistant crops, securing agricultural yields in an era of climate unpredictability.
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Affiliation(s)
- Xi Chen
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528000, China
- School of Biological Sciences, University of Western Australia, Crawley, Western Australia, 6009, Australia
| | - Chenchen Zhao
- Tasmanian Institute of Agriculture, University of Tasmania, Prospect, Tasmania, 7250, Australia
| | - Ping Yun
- School of Biological Sciences, University of Western Australia, Crawley, Western Australia, 6009, Australia
| | - Min Yu
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528000, China
- School of Biological Sciences, University of Western Australia, Crawley, Western Australia, 6009, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Prospect, Tasmania, 7250, Australia
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, New South Wales, 2751, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, 2751, Australia
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528000, China
- School of Biological Sciences, University of Western Australia, Crawley, Western Australia, 6009, Australia
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Yadav U, Anand V, Kumar S, Srivastava S, Mishra SK, Chauhan PS, Singh PC. Endophytic biofungicide Bacillus subtilis (NBRI-W9) reshapes the metabolic homeostasis disrupted by the chemical fungicide, propiconazole in tomato plants to provide sustainable immunity against non-target bacterial pathogens. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 343:123144. [PMID: 38123116 DOI: 10.1016/j.envpol.2023.123144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 11/05/2023] [Accepted: 12/10/2023] [Indexed: 12/23/2023]
Abstract
Chemical and microbial fungicides (Bio/fungicide) act differentially on plant systems. The present work assessed the metabolic profile of tomato plants vis-a-vis endophytic diversity after spraying of Propiconazole (PCZ) and endophytic biofungicide Bacillus subtilis (W9). Bio/fungicides were sprayed on tomato plants and evaluated for phenotypic, biochemical, and metabolic profiles after one week. In W9 treatment, a significant increase in relative abundance of several metabolites was observed including sugars, sugar alcohols, fatty-acids, organic-acids, and amino-acids. Polysaccharides and fatty acids showed a significant positive correlation with Rhizobiales, Burkholderiales, Bacillales, and Lactobacillales, respectively (p < 0.05). The PCZ and W9 treated plant's metabolic status significantly affected their resistance to non-target, bacterial pathogen P. syringae. Compared to PCZ and control, W9 treatment reduced the ROS deposition and expression of antioxidants gene GPx, PO (~0.1-1.7fold). It enhanced the genes related to the Phenylpropanoid pathway (∼1.6-5.2 fold), PR protein (~1.2-3.4 fold), and JA biosynthesis (~1.7-4.3 fold), resulting in reduced disease incidence. The results provide novel insights into the effects of endophytic biofungicide and chemical fungicides on the plant's metabolic status, its relation to the endophytes, and role in altering the plant's immune system.
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Affiliation(s)
- Udit Yadav
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR) CSIR-HRDC, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh, 201 002, India
| | - Vandana Anand
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR) CSIR-HRDC, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh, 201 002, India
| | - Sanjeev Kumar
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR) CSIR-HRDC, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh, 201 002, India
| | - Suchi Srivastava
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR) CSIR-HRDC, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh, 201 002, India
| | - Shashank K Mishra
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India
| | - Puneet Singh Chauhan
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR) CSIR-HRDC, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh, 201 002, India
| | - Poonam C Singh
- Microbial Technology Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow, 226 001, India; Academy of Scientific and Innovative Research (AcSIR) CSIR-HRDC, Kamla Nehru Nagar, Ghaziabad, Uttar Pradesh, 201 002, India.
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4
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Krishnamurthy P, Amzah NRB, Kumar PP. High-affinity potassium transporter from a mangrove tree Avicennia officinalis increases salinity tolerance of Arabidopsis thaliana. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 336:111841. [PMID: 37625549 DOI: 10.1016/j.plantsci.2023.111841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2023] [Revised: 07/10/2023] [Accepted: 08/22/2023] [Indexed: 08/27/2023]
Abstract
Salinity reduces the growth and productivity of crop plants worldwide. Mangroves have evolved efficient ion homeostasis mechanisms to survive under their natural saline growth habitat. Information obtained from them may be utilized for increasing the salt tolerance of crop plants. We identified and characterized a high-affinity potassium transporter gene (AoHKT1) from Avicennia officinalis. The expression of AoHKT1 was induced by NaCl mainly in the leaves. Functional study by heterologous expression of AoHKT1 in Arabidopsis T-DNA insertional mutants athkt1-1 and athkt1-4 revealed that it could enhance the salt tolerance of the mutant plants. This was accompanied by an increase in K+ accumulation in the leaves. AoHKT1 was localized to the plasma membrane in Arabidopsis, and when expressed in yeast, it could complement the functions of both Na+ and K+ transporters. An attempt was made to identify the upstream regulator of AtHKT1, a close homolog of AoHKT1. Using chromatin immunoprecipitation, luciferase assay and yeast one-hybrid assays, WRKY9 was identified as the main transcription factor in the process. Furthermore, this was corroborated by the observation that AtHKT1 levels were significantly reduced in the atwrky9 seedlings. These findings revealed a part of the molecular regulatory mechanism of HKT1 induction in response to salt treatment in Arabidopsis. Our study suggests that AoHKT1 is a potential candidate for generating crop plants with increased salt tolerance.
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Affiliation(s)
- Pannaga Krishnamurthy
- Department of Biological Sciences and Research Centre on Sustainable Urban Farming, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
| | - Nur Ramizah Bte Amzah
- Department of Biological Sciences and Research Centre on Sustainable Urban Farming, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore
| | - Prakash P Kumar
- Department of Biological Sciences and Research Centre on Sustainable Urban Farming, National University of Singapore, 14 Science Drive 4, Singapore 117543, Singapore.
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5
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Ageyeva MN, Zdobnova TA, Nazarova MS, Raldugina GN, Beliaev DV, Vodeneev VA, Brilkina AA. The Morphological Parameters and Cytosolic pH of Cells of Root Zones in Tobacco Plants ( Nicotiana tabacum L.): Nonlinear Effects of NaCl Concentrations. PLANTS (BASEL, SWITZERLAND) 2023; 12:3708. [PMID: 37960064 PMCID: PMC10648452 DOI: 10.3390/plants12213708] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Revised: 10/18/2023] [Accepted: 10/26/2023] [Indexed: 11/15/2023]
Abstract
Salinity impacts important processes in plants, reducing their yield. The effect of salinity on the cytosolic pH (pHcyt) has been little studied. In this research, we employed transgenic tobacco plants expressing the pH sensor Pt-GFP to investigate the alterations in pHcyt in cells across various root zones. Furthermore, we examined a wide spectrum of NaCl concentrations (ranging from 0 to 150 mM) and assessed morphological parameters and plant development. Our findings revealed a pattern of cytosolic acidification in cells across all root zones at lower NaCl concentrations (50, 100 mM). Interestingly, at 150 mM NaCl, pHcyt levels either increased or returned to normal, indicating a nonlinear effect of salinity on pHcyt. Most studied parameters related to development and morphology exhibited an inhibitory influence in response to NaCl. Notably, a nonlinear relationship was observed in the cell length within the elongation and differentiation zones. While cell elongation occurred at 50 and 100 mM NaCl, it was not evident at 150 mM NaCl. This suggests a complex interplay between stimulating and inhibitory effects of salinity, contributing to the nonlinear relationship observed between pHcyt, cell length, and NaCl concentration.
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Affiliation(s)
- Maria N. Ageyeva
- Department of Biochemistry and Biotechnology, National Research Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (M.S.N.); (A.A.B.)
| | - Tatiana A. Zdobnova
- Department of Biophysics, National Research Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (T.A.Z.); (V.A.V.)
| | - Mariia S. Nazarova
- Department of Biochemistry and Biotechnology, National Research Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (M.S.N.); (A.A.B.)
| | - Galina N. Raldugina
- Laboratory of Ion Transport and Salinity Resistance, K. A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, 127276 Moscow, Russia;
| | - Denis V. Beliaev
- Moscow Institute of Physics and Technology, 141700 Dolgoprudny, Russia;
| | - Vladimir A. Vodeneev
- Department of Biophysics, National Research Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (T.A.Z.); (V.A.V.)
| | - Anna A. Brilkina
- Department of Biochemistry and Biotechnology, National Research Lobachevsky State University of Nizhny Novgorod, 603950 Nizhny Novgorod, Russia; (M.S.N.); (A.A.B.)
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6
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Elazab D, Lambardi M, Capuana M. In Vitro Culture Studies for the Mitigation of Heavy Metal Stress in Plants. PLANTS (BASEL, SWITZERLAND) 2023; 12:3387. [PMID: 37836127 PMCID: PMC10574448 DOI: 10.3390/plants12193387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 09/21/2023] [Accepted: 09/22/2023] [Indexed: 10/15/2023]
Abstract
Heavy metals are among the most common and dangerous contaminants; their action on plants, as well as the possibility for plants to effectively absorb and translocate them, have been studied for several years, mainly for exploitation in phytoremediation, an environmentally friendly and potentially effective technology proposed and studied for the recovery of contaminated soils and waters. In this work, the analysis has focused on the studies developed using in vitro techniques on the possibilities of mitigating, in plants, the stress due to the presence of heavy metals and/or improving their absorption. These objectives can be pursued with the use of different substances and organisms, which have been examined in detail. The following are therefore presented in this review: an analysis of the role of metals and metalloids; the use of several plant growth regulators, with their mechanisms of action in different physiological phases of the plant; the activity of bacteria and fungi; and the role of other effective compounds, such as ascorbic acid and glutathione.
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Affiliation(s)
- Doaa Elazab
- IBE—Institute of BioEconomy, National Research Council (CNR), 50019 Florence, Italy; (D.E.); (M.L.)
- Department of Pomology, Faculty of Agriculture, Assiut University, Assiut 71526, Egypt
| | - Maurizio Lambardi
- IBE—Institute of BioEconomy, National Research Council (CNR), 50019 Florence, Italy; (D.E.); (M.L.)
| | - Maurizio Capuana
- IBBR—Institute of Biosciences and Bioresources, National Research Council (CNR), 50019 Florence, Italy
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7
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Noda Y, Hirose A, Wakazaki M, Sato M, Toyooka K, Kawachi N, Furukawa J, Tanoi K, Naito K. Starch-dependent sodium accumulation in the leaves of Vigna riukiuensis. JOURNAL OF PLANT RESEARCH 2023; 136:705-714. [PMID: 37233957 PMCID: PMC10421823 DOI: 10.1007/s10265-023-01470-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Accepted: 05/11/2023] [Indexed: 05/27/2023]
Abstract
This research provides insight into a unique salt tolerance mechanism of Vigna riukiuensis. V. riukiuensis is one of the salt-tolerant species identified from the genus Vigna. We have previously reported that V. riukiuensis accumulates a higher amount of sodium in the leaves, whereas V. nakashimae, a close relative of V. riukiuensis, suppresses sodium allocation to the leaves. We first suspected that V. riukiuensis would have developed vacuoles for sodium sequestration, but there were no differences compared to a salt-sensitive species V. angularis. However, many starch granules were observed in the chloroplasts of V. riukiuensis. In addition, forced degradation of leaf starch by shading treatment resulted in no radio-Na (22Na) accumulation in the leaves. We performed SEM-EDX to locate Na in leaf sections and detected Na in chloroplasts of V. riukiuensis, especially around the starch granules but not in the middle of. Our results could provide the second evidence of the Na-trapping system by starch granules, following the case of common reed that accumulates starch granule at the shoot base for binding Na.
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Affiliation(s)
- Yusaku Noda
- National Institutes for Quantum Science and Technology (QST), Takasaki Institute of Advanced Quantum Science, Gunma, 370-1292, Japan
- Research Center of Genetic Resources, National Agriculture and Food Research Organization, Ibaraki, 305-8602, Japan
| | | | - Mayumi Wakazaki
- Mass Spectrometry and Microscopy Unit, RIKEN Center for Sustainable Resource Science, 230-0045, Kanagawa, Japan
| | - Mayuko Sato
- Mass Spectrometry and Microscopy Unit, RIKEN Center for Sustainable Resource Science, 230-0045, Kanagawa, Japan
| | - Kiminori Toyooka
- Mass Spectrometry and Microscopy Unit, RIKEN Center for Sustainable Resource Science, 230-0045, Kanagawa, Japan
| | - Naoki Kawachi
- National Institutes for Quantum Science and Technology (QST), Takasaki Institute of Advanced Quantum Science, Gunma, 370-1292, Japan
| | - Jun Furukawa
- Faculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, 305-8572, Japan
| | - Keitaro Tanoi
- Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657, Japan
| | - Ken Naito
- Research Center of Genetic Resources, National Agriculture and Food Research Organization, Ibaraki, 305-8602, Japan.
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Salinity-Induced Cytosolic Alkaline Shifts in Arabidopsis Roots Require the SOS Pathway. Int J Mol Sci 2023; 24:ijms24043549. [PMID: 36834961 PMCID: PMC9960406 DOI: 10.3390/ijms24043549] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2022] [Revised: 01/27/2023] [Accepted: 02/07/2023] [Indexed: 02/12/2023] Open
Abstract
Plants have evolved elaborate mechanisms to sense, respond to and overcome the detrimental effects of high soil salinity. The role of calcium transients in salinity stress signaling is well established, but the physiological significance of concurrent salinity-induced changes in cytosolic pH remains largely undefined. Here, we analyzed the response of Arabidopsis roots expressing the genetically encoded ratiometric pH-sensor pHGFP fused to marker proteins for the recruitment of the sensor to the cytosolic side of the tonoplast (pHGFP-VTI11) and the plasma membrane (pHGFP-LTI6b). Salinity elicited a rapid alkalinization of cytosolic pH (pHcyt) in the meristematic and elongation zone of wild-type roots. The pH-shift near the plasma membrane preceded that at the tonoplast. In pH-maps transversal to the root axis, the epidermis and cortex had cells with a more alkaline pHcyt relative to cells in the stele in control conditions. Conversely, seedlings treated with 100 mM NaCl exhibited an increased pHcyt in cells of the vasculature relative to the external layers of the root, and this response occurred in both reporter lines. These pHcyt changes were substantially reduced in mutant roots lacking a functional SOS3/CBL4 protein, suggesting that the operation of the SOS pathway mediated the dynamics of pHcyt in response to salinity.
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9
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Huang X, Tanveer M, Min Y, Shabala S. Melatonin as a regulator of plant ionic homeostasis: implications for abiotic stress tolerance. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:5886-5902. [PMID: 35640481 DOI: 10.1093/jxb/erac224] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 05/23/2022] [Indexed: 06/15/2023]
Abstract
Melatonin is a highly conserved and ubiquitous molecule that operates upstream of a broad array of receptors in animal systems. Since melatonin was discovered in plants in 1995, hundreds of papers have been published revealing its role in plant growth, development, and adaptive responses to the environment. This paper summarizes the current state of knowledge of melatonin's involvement in regulating plant ion homeostasis and abiotic stress tolerance. The major topics covered here are: (i) melatonin's control of H+-ATPase activity and its implication for plant adaptive responses to various abiotic stresses; (ii) regulation of the reactive oxygen species (ROS)-Ca2+ hub by melatonin and its role in stress signaling; and (iii) melatonin's regulation of ionic homeostasis via hormonal cross-talk. We also show that the properties of the melatonin molecule allow its direct scavenging of ROS, thus preventing negative effects of ROS-induced activation of ion channels. The above 'desensitization' may play a critical role in preventing stress-induced K+ loss from the cytosol as well as maintaining basic levels of cytosolic Ca2+ required for optimal cell operation. Future studies should focus on revealing the molecular identity of transporters that could be directly regulated by melatonin and providing a bioinformatic analysis of evolutionary aspects of melatonin sensing and signaling.
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Affiliation(s)
- Xin Huang
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, China
| | - Mohsin Tanveer
- Tasmanian Institute of Agriculture, University of Tasmania, Tas, Hobart, Australia
| | - Yu Min
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, China
| | - Sergey Shabala
- International Research Center for Environmental Membrane Biology, Foshan University, Foshan, Guangdong, China
- Tasmanian Institute of Agriculture, University of Tasmania, Tas, Hobart, Australia
- School of Biological Sciences, University of Western Australia, Perth, WA, Australia
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10
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Sathee L, Sairam RK, Chinnusamy V, Jha SK, Singh D. Upregulation of genes encoding plastidic isoforms of antioxidant enzymes and osmolyte synthesis impart tissue tolerance to salinity stress in bread wheat. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2022; 28:1639-1655. [PMID: 36387974 PMCID: PMC9636341 DOI: 10.1007/s12298-022-01237-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Revised: 09/22/2022] [Accepted: 10/03/2022] [Indexed: 06/16/2023]
Abstract
Wheat genotype Kharchia is a donor for salt tolerance in wheat breeding programs worldwide; however, the tolerance mechanism in Kharchia is yet to be deciphered completely. To avoid spending energy on accumulating organic osmolytes and to conserve resources for maintaining growth, plants deploy sodium (Na+) ions to maintain turgor. The enhanced ability to tolerate excess ion accumulation and ion toxicity is designated as tissue tolerance. In this study, salt-tolerant wheat genotype (Kharchia 65) and sensitive cultivars (HD2687, HD2009, WL711) were exposed to vegetative stage salinity stress (for four weeks). Kharchia 65 showed better tissue tolerance to salinity than the other genotypes based on different physiological parameters. Gene expression and abundance of chloroplast localized antioxidant enzymes and compatible osmolyte synthesis were upregulated by salinity in Kharchia 65. In Kharchia 65, the higher abundance of NADPH Oxidase (RBOH) transcripts and localization of reactive oxygen species (ROS) suggested an apoplastic ROS burst. Expression of calcium signaling genes of SOS pathway, MAPK6, bZIP6 and NAC4 were also upregulated by salinity in Kharchia 65. Considering that Kharchia local is the donor of salt tolerance trait in Kharchia 65, the publically available Kharchia local transcriptome data were analyzed. Our results and the in-silico transcriptome analysis also confirmed that higher basal levels and the stress-induced rise in the expression of plastidic isoforms of antioxidant enzymes and osmolyte biosynthesis genes provide tissue tolerance in Kharchia 65. Thus, in salinity tolerant genotype Kharchia 65, ROS burst mediated triggering of calcium signaling improves Na+ exclusion and tissue tolerance to Na+. Supplementary Information The online version contains supplementary material available at 10.1007/s12298-022-01237-w.
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Affiliation(s)
- Lekshmy Sathee
- Division of Plant Physiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India
| | - Raj K. Sairam
- Division of Plant Physiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India
| | - Viswanathan Chinnusamy
- Division of Plant Physiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India
| | - Shailendra K. Jha
- Division of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India
| | - Dalveer Singh
- Division of Plant Physiology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012 India
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11
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Wegner LH. Empowering roots-Some current aspects of root bioenergetics. FRONTIERS IN PLANT SCIENCE 2022; 13:853309. [PMID: 36051301 PMCID: PMC9424547 DOI: 10.3389/fpls.2022.853309] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2022] [Accepted: 07/15/2022] [Indexed: 06/15/2023]
Abstract
Roots of higher plants provide the shoot with nutrients and water. In exchange, they receive photosynthates, which serve both as energy source and building blocks for maintenance and growth. While studies in plant bioenergetics used to focus on photosynthesis, several more recent findings also aroused or renewed interest in energy conversion and allocation in roots. Root building costs were identified as a long-undervalued trait, which turned out to be highly relevant for stress tolerance and nutrient use efficiency. Reduced building costs per root length (e.g., by aerenchyma formation or by increasing the cell size) are beneficial for exploring the soil for nutrient-rich patches, especially in low-input agrosystems. Also, an apparent mismatch was frequently found between the root energy budget in the form of the ATP pool on the one side and the apparent costs on the other side, particularly the costs of membrane transport under stress conditions, e.g., the Na+ detoxification costs resulting from Na+ sequestration at the plasma membrane. Ion transport across the plasma membrane (and also endomembranes) is coupled to the proton motive force usually believed to be exclusively generated by H+ ATPases. Recently, an alternative mechanism, the biochemical pH clamp, was identified which relies on H+ formation and binding in the apoplast and the cytosol, respectively, driven by metabolism (so-called active buffering). On this background, several aspects of root bioenergetics are discussed. These are (1) root respiration in soil, with a critical view on calorimetric vs. gas exchange measurements; (2) processes of energy conversion in mitochondria with a special focus on the role of the alternative oxidases, which allow adjusting carbon flow through metabolic pathways to membrane transport processes; and (3) energy allocation, in particular to transport across the plasma membrane forming the interface to soil solution. A concluding remark is dedicated to modeling root bioenergetics for optimizing further breeding strategies. Apparent "energy spoilers" may bestow the plant with a yet unidentified advantage only unfolding their beneficial effect under certain environmental conditions.
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Dreyer I, Li K, Riedelsberger J, Hedrich R, Konrad KR, Michard E. Transporter networks can serve plant cells as nutrient sensors and mimic transceptor-like behavior. iScience 2022; 25:104078. [PMID: 35378857 PMCID: PMC8976136 DOI: 10.1016/j.isci.2022.104078] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 02/03/2022] [Accepted: 03/11/2022] [Indexed: 12/25/2022] Open
Abstract
Sensing of external mineral nutrient concentrations is essential for plants to colonize environments with a large spectrum of nutrient availability. Here, we analyzed transporter networks in computational cell biology simulations to understand better the initial steps of this sensing process. The networks analyzed were capable of translating the information of changing external nutrient concentrations into cytosolic H+ and Ca2+ signals, two of the most ubiquitous cellular second messengers. The concept emerging from the computational simulations was confirmed in wet-lab experiments. We document in guard cells that alterations in the external KCl concentration were translated into cytosolic H+ and Ca2+ transients as predicted. We show that transporter networks do not only serve their primary task of transport, but can also take on the role of a receptor without requiring conformational changes of a transporter protein. Such transceptor-like phenomena may be quite common in plants.
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Affiliation(s)
- Ingo Dreyer
- Centro de Bioinformática, Simulación y Modelado (CBSM), Facultad de Ingeniería, Universidad de Talca, Campus Talca, Avenida Lircay, Talca 3460000, Chile
| | - Kunkun Li
- Department of Botany I, Julius-Von-Sachs Institute for Biosciences, University of Wuerzburg, Julius-von-Sachs-Platz 2, 97082 Wuerzburg, Germany
| | - Janin Riedelsberger
- Centro de Bioinformática, Simulación y Modelado (CBSM), Facultad de Ingeniería, Universidad de Talca, Campus Talca, Avenida Lircay, Talca 3460000, Chile
| | - Rainer Hedrich
- Department of Botany I, Julius-Von-Sachs Institute for Biosciences, University of Wuerzburg, Julius-von-Sachs-Platz 2, 97082 Wuerzburg, Germany
| | - Kai R. Konrad
- Department of Botany I, Julius-Von-Sachs Institute for Biosciences, University of Wuerzburg, Julius-von-Sachs-Platz 2, 97082 Wuerzburg, Germany
| | - Erwan Michard
- Instituto de Ciencias Biológicas, Universidad de Talca, Campus Talca, Avenida Lircay, Talca 3460000, Chile
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Wang NH, Zhou XY, Shi SH, Zhang S, Chen ZH, Ali MA, Ahmed IM, Wang Y, Wu F. An miR156-regulated nucleobase-ascorbate transporter 2 confers cadmium tolerance via enhanced anti-oxidative capacity in barley. J Adv Res 2022; 44:23-37. [PMID: 36725193 PMCID: PMC9936425 DOI: 10.1016/j.jare.2022.04.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Revised: 03/29/2022] [Accepted: 04/05/2022] [Indexed: 02/04/2023] Open
Abstract
INTRODUCTION Cadmium (Cd) is one of the most detrimental heavy metal pollutants, seriously affecting crop production and human health. Nucleobase-ascorbic acid transporters (NAT) are widely present in many living organisms including plants, animals and microbes; however, the role of NAT in plant Cd tolerance remains unknown. OBJECTIVES To identify Cd-induced miRNAs that target HvNAT2 and to determine the role of this gene and its product in Cd tolerance. METHODS High-throughput-sequencing was used to identify the miRNA expression profile of barley roots in response to Cd stress. Overexpression (OX) and RNAi lines were then constructed for HvNAT2 and comparative transcriptomic analysis was performed to determine the function of this transporter examining its effects on traits such as Cd uptake/flux and translocation, morphology and antioxidant capacity in relation to Cd tolerance. In addition, phylogenetic analysis was performed to obtain insights into the evolution of HvNAT2. RESULTS Cd stress-induced genome-wide expression profiles of miRNAs identified a Cd-induced miRNA, miR156g-3p_3, that had HvNAT2 as its target. HvNAT2 was negatively regulated in the high-Cd-accumulating and Cd-tolerant genotype Zhenong8. Evolutionary analysis indicated that orthologues of the plasma membrane localized, HvNAT2, can be traced back to the sister group of land plants, the streptophyte algae. Overexpression of HvNAT2 increases Cd tolerance with higher tissue Cd accumulation but less oxidative damage in transgenic barley plants. RNAi of HvNAT2 leads to a significant reduction of Cd tolerance. The higher Cd accumulation in roots of the OX3 line was also demonstrated by confocal microscopy and electrophysiology. Transcriptome analysis showed that the enhancement of antioxidant capacity by HvNAT2 was related to stress signaling pathways. Furthermore, oxidative stress tolerance in HvNAT2-OX plants was regulated by the synthesis of phytochelatins and the glutathione metabolism cycle. CONCLUSION Our study reveals a key molecular mechanism of NAT in Cd tolerance in plants that is useful for sustainable agricultural production and management of hazardous this heavy metal for better environment management and ecosystem function.
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Affiliation(s)
- Nian-Hong Wang
- Department of Agronomy, College of Agriculture and Biotechnology, Zijingang Campus, Zhejiang University, Hangzhou, 310058, PR China
| | - Xue-Yi Zhou
- Department of Agronomy, College of Agriculture and Biotechnology, Zijingang Campus, Zhejiang University, Hangzhou, 310058, PR China
| | - Shou-Heng Shi
- Department of Agronomy, College of Agriculture and Biotechnology, Zijingang Campus, Zhejiang University, Hangzhou, 310058, PR China
| | - Shuo Zhang
- Department of Agronomy, College of Agriculture and Biotechnology, Zijingang Campus, Zhejiang University, Hangzhou, 310058, PR China,Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou, 225009, PR China
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW, Australia,Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
| | - Mohamed Abdelalim Ali
- Faculty of Agriculture, Microbiology Department, Cairo University, Giza, 2613, Egypt
| | - Imrul Mosaddek Ahmed
- Plant Physiology Division, Bangladesh Agricultural Research Institute, Gazipur-1701, Bangladesh
| | - Yizhou Wang
- Department of Agronomy, College of Agriculture and Biotechnology, Zijingang Campus, Zhejiang University, Hangzhou, 310058, PR China
| | - Feibo Wu
- Department of Agronomy, College of Agriculture and Biotechnology, Zijingang Campus, Zhejiang University, Hangzhou, 310058, PR China; Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou, 225009, PR China.
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Shahzad B, Yun P, Shabala L, Zhou M, Sellamuthu G, Venkataraman G, Chen ZH, Shabala S. Unravelling the physiological basis of salinity stress tolerance in cultivated and wild rice species. FUNCTIONAL PLANT BIOLOGY : FPB 2022; 49:351-364. [PMID: 35189073 DOI: 10.1071/fp21336] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 01/24/2022] [Indexed: 06/14/2023]
Abstract
Wild rice species provide a rich source of genetic diversity for possible introgression of salinity stress tolerance in cultivated rice. We investigated the physiological basis of salinity stress tolerance in Oryza species by using six rice genotypes (Oryza sativa L.) and four wild rice species. Three weeks of salinity treatment significantly (P <0.05) reduced physiological and growth indices of all cultivated and wild rice lines. However, the impact of salinity-induced growth reduction differed substantially among accessions. Salt tolerant accessions showed better control over gas exchange properties, exhibited higher tissue tolerance, and retained higher potassium ion content despite higher sodium ion accumulation in leaves. Wild rice species showed relatively lower and steadier xylem sap sodium ion content over the period of 3weeks analysed, suggesting better control over ionic sodium xylem loading and its delivery to shoots with efficient vacuolar sodium ion sequestration. Contrary to this, saline sensitive genotypes managed to avoid initial Na+ loading but failed to accomplish this in the long term and showed higher sap sodium ion content. Conclusively, our results suggest that wild rice genotypes have more efficient control over xylem sodium ion loading, rely on tissue tolerance mechanisms and allow for a rapid osmotic adjustment by using sodium ions as cheap osmoticum for osmoregulation.
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Affiliation(s)
- Babar Shahzad
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas. 7001, Australia
| | - Ping Yun
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas. 7001, Australia
| | - Lana Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas. 7001, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas. 7001, Australia
| | - Gothandapani Sellamuthu
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai 600113, India; and Forest Molecular Entomology Laboratory, Excellent Team for Mitigation (ETM), Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, Prague 16500, Czech Republic
| | - Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai 600113, India
| | - Zhong-Hua Chen
- School of Science, Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas. 7001, Australia; and International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
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Ishikawa T, Shabala L, Zhou M, Venkataraman G, Yu M, Sellamuthu G, Chen ZH, Shabala S. Comparative Analysis of Root Na+ Relation under Salinity between Oryza sativa and Oryza coarctata. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11050656. [PMID: 35270125 PMCID: PMC8912616 DOI: 10.3390/plants11050656] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2022] [Revised: 02/23/2022] [Accepted: 02/23/2022] [Indexed: 06/01/2023]
Abstract
Na+ toxicity is one of the major physiological constraints imposed by salinity on plant performance. At the same time, Na+ uptake may be beneficial under some circumstances as an easily accessible inorganic ion that can be used for increasing solute concentrations and maintaining cell turgor. Two rice species, Oryza sativa (cultivated rice, salt-sensitive) and Oryza coarctata (wild rice, salt-tolerant), demonstrated different strategies in controlling Na+ uptake. Glasshouse experiments and gene expression analysis suggested that salt-treated wild rice quickly increased xylem Na+ loading for osmotic adjustment but maintained a non-toxic level of stable shoot Na+ concentration by increased activity of a high affinity K+ transporter HKT1;5 (essential for xylem Na+ unloading) and a Na+/H+ exchanger NHX (for sequestering Na+ and K+ into root vacuoles). Cultivated rice prevented Na+ uptake and transport to the shoot at the beginning of salt treatment but failed to maintain it in the long term. While electrophysiological assays revealed greater net Na+ uptake upon salt application in cultivated rice, O. sativa plants showed much stronger activation of the root plasma membrane Na+/H+ Salt Overly Sensitive 1 (SOS1) exchanger. Thus, it appears that wild rice limits passive Na+ entry into root cells while cultivated rice relies heavily on SOS1-mediating Na+ exclusion, with major penalties imposed by the existence of the "futile cycle" at the plasma membrane.
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Affiliation(s)
- Tetsuya Ishikawa
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7005, Australia; (T.I.); (L.S.); (M.Z.)
| | - Lana Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7005, Australia; (T.I.); (L.S.); (M.Z.)
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7005, Australia; (T.I.); (L.S.); (M.Z.)
| | - Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai 600113, India; (G.V.); (G.S.)
| | - Min Yu
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China;
| | - Gothandapani Sellamuthu
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai 600113, India; (G.V.); (G.S.)
- Forest Molecular Entomology Lab, Excellent Team for Mitigation (ETM), Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague, 16500 Prague, Czech Republic
| | - Zhong-Hua Chen
- School of Science, Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia;
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS 7005, Australia; (T.I.); (L.S.); (M.Z.)
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China;
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Abbas A, Shah AN, Tanveer M, Ahmed W, Shah AA, Fiaz S, Waqas MM, Ullah S. MiRNA fine tuning for crop improvement: using advance computational models and biotechnological tools. Mol Biol Rep 2022; 49:5437-5450. [PMID: 35182321 DOI: 10.1007/s11033-022-07231-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Accepted: 02/04/2022] [Indexed: 12/17/2022]
Abstract
MiRNAs modulate target genes expression at post-transcriptional levels, by reducing spatial abundance of mRNAs. MiRNAs regulats plant metabolism, and emerged as regulators of plant stress responses. Which make miRNAs promising candidates for fine tuning to affectively alter crop stress tolerance and other important traits. With recent advancements in the computational biology and biotechnology miRNAs structure and target prediction is possible resulting in pin point editing; miRNA modulation can be done by up or down regulating miRNAs using recently available biotechnological tools (CRISPR Cas9, TALENS and RNAi). In this review we have focused on miRNA biogenesis, miRNA roles in plant development, plant stress responses and roles in signaling pathways. Additionally we have discussed latest computational prediction models for miRNA to target gene interaction and biotechnological systems used recently for miRNA modulation. We have also highlighted setbacks and limitations in the way of miRNA modulation; providing entirely a new direction for improvement in plant genomics primarily focusing miRNAs.
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Affiliation(s)
- Asad Abbas
- School of Horticulture, Anhui Agricultural University, Hefei, 230036, China
| | - Adnan Noor Shah
- Department of Agricultural Engineering, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan 64200, Punjab, Pakistan.
| | - Mohsin Tanveer
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Australia
| | - Waseem Ahmed
- Department of Horticulture, The University of Haripur, Hatatr Road, Haripur, 22620, Pakistan
| | - Anis Ali Shah
- Department of Botany, Division of Science and Technology, University of Education, Lahore, Pakistan
| | - Sajid Fiaz
- Department of Plant Breeding and Genetics, The University of Haripur, Haripur, Pakistan
| | - Muhammad Mohsin Waqas
- Department of Agricultural Engineering, Khwaja Fareed University of Engineering and Information Technology, Rahim Yar Khan 64200, Punjab, Pakistan
| | - Sami Ullah
- Department of Chemistry, College of Science, King Khalid University, Abha, 61413, Saudi Arabia
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Hashimoto K, Koselski M, Tsuboyama S, Dziubinska H, Trębacz K, Kuchitsu K. Functional Analyses of the Two Distinctive Types of Two-Pore Channels and the Slow Vacuolar Channel in Marchantia polymorpha. PLANT & CELL PHYSIOLOGY 2022; 63:163-175. [PMID: 34936705 DOI: 10.1093/pcp/pcab176] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2021] [Revised: 11/23/2021] [Accepted: 12/22/2021] [Indexed: 06/14/2023]
Abstract
The two-pore channel (TPC) family is widely conserved in eukaryotes. Many vascular plants, including Arabidopsis and rice, possess a single TPC gene which functions as a slow vacuolar (SV) channel-voltage-dependent cation-permeable channel located in the vacuolar membrane (tonoplast). On the other hand, a liverwort Marchantia polymorpha genome encodes three TPC homologs: MpTPC1 is similar to TPCs in vascular plants (type 1 TPC), while MpTPC2 and MpTPC3 are classified into a distinctive group (type 2 TPC). Phylogenetic analysis suggested that the type 2 TPC emerged before the land colonization in plant evolution and was lost in vascular plants and hornworts. All of the three MpTPCs were shown to be localized at the tonoplast. We generated knockout mutants of tpc1, tpc2, tpc3 and tpc2 tpc3 double mutant by clustered regularly interspaced short palindromic repeats/Cas9 genome editing and performed patch-clamp analyses of isolated vacuoles. The SV channel activity was abolished in the Mptpc1 loss-of-function mutant (Mptpc1-1KO), while Mptpc2-1KO, Mptpc3-1KO and Mptpc2-2/tpc3-2KO double mutant exhibited similar activity to the wild type, indicating that MpTPC1 (type 1) is solely responsible for the SV channel activity. Activators of mammalian TPCs, phosphatidylinositol-3,5-bisphosphate and nicotinic acid adenine dinucleotide phosphate, did not affect the ion channel activity of any MpTPCs. These results indicate that the type 1 TPCs, which are well conserved in all land plant species, encode the SV channel, while the type 2 TPCs likely encode other tonoplast cation channel(s) distinct from the SV channel and animal TPCs.
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Affiliation(s)
| | - Mateusz Koselski
- Department of Plant Physiology and Biophysics, Institute of Biological Sciences, Faculty of Biology and Biotechnology, Maria Curie-Sklodowska University, Akademicka 19, Lublin 20-033, Poland
| | - Shoko Tsuboyama
- Department of Applied Biological Science, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba, 278-8510 Japan
| | - Halina Dziubinska
- Department of Plant Physiology and Biophysics, Institute of Biological Sciences, Faculty of Biology and Biotechnology, Maria Curie-Sklodowska University, Akademicka 19, Lublin 20-033, Poland
| | - Kazimierz Trębacz
- Department of Plant Physiology and Biophysics, Institute of Biological Sciences, Faculty of Biology and Biotechnology, Maria Curie-Sklodowska University, Akademicka 19, Lublin 20-033, Poland
- Department of Applied Biological Science, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba, 278-8510 Japan
| | - Kazuyuki Kuchitsu
- Department of Applied Biological Science, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba, 278-8510 Japan
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18
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Solis CA, Yong MT, Zhou M, Venkataraman G, Shabala L, Holford P, Shabala S, Chen ZH. Evolutionary Significance of NHX Family and NHX1 in Salinity Stress Adaptation in the Genus Oryza. Int J Mol Sci 2022; 23:ijms23042092. [PMID: 35216206 PMCID: PMC8879705 DOI: 10.3390/ijms23042092] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Revised: 01/28/2022] [Accepted: 02/07/2022] [Indexed: 02/06/2023] Open
Abstract
Rice (Oryza sativa), a staple crop for a substantial part of the world’s population, is highly sensitive to soil salinity; however, some wild Oryza relatives can survive in highly saline environments. Sodium/hydrogen antiporter (NHX) family members contribute to Na+ homeostasis in plants and play a major role in conferring salinity tolerance. In this study, we analyzed the evolution of NHX family members using phylogeny, conserved domains, tertiary structures, expression patterns, and physiology of cultivated and wild Oryza species to decipher the role of NHXs in salt tolerance in Oryza. Phylogenetic analysis showed that the NHX family can be classified into three subfamilies directly related to their subcellular localization: endomembrane, plasma membrane, and tonoplast (vacuolar subfamily, vNHX1). Phylogenetic and structural analysis showed that vNHX1s have evolved from streptophyte algae (e.g., Klebsormidium nitens) and are abundant and highly conserved in all major land plant lineages, including Oryza. Moreover, we showed that tissue tolerance is a crucial trait conferring tolerance to salinity in wild rice species. Higher Na+ accumulation and reduced Na+ effluxes in leaf mesophyll were observed in the salt-tolerant wild rice species O. alta, O. latifolia, and O. coarctata. Among the key genes affecting tissue tolerance, expression of NHX1 and SOS1/NHX7 exhibited significant correlation with salt tolerance among the rice species and cultivars. This study provides insights into the evolutionary origin of plant NHXs and their role in tissue tolerance of Oryza species and facilitates the inclusion of this trait during the development of salinity-tolerant rice cultivars.
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Affiliation(s)
- Celymar Angela Solis
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
| | - Miing-Tiem Yong
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
| | - Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai 600113, India;
| | - Lana Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
| | - Paul Holford
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; (M.Z.); (L.S.)
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- Correspondence: (S.S.); (Z.-H.C.); Tel.: +61-245-701-934 (Z.-H.C.)
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW 2751, Australia; (C.A.S.); (M.-T.Y.); (P.H.)
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia
- Correspondence: (S.S.); (Z.-H.C.); Tel.: +61-245-701-934 (Z.-H.C.)
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Mohamed ME, El Semary NA, Younis NS. Silver Nanoparticle Production by the Cyanobacterium Cyanothece sp.: De Novo Manipulation of Nano-Biosynthesis by Phytohormones. Life (Basel) 2022; 12:life12020139. [PMID: 35207426 PMCID: PMC8878298 DOI: 10.3390/life12020139] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Revised: 01/14/2022] [Accepted: 01/15/2022] [Indexed: 01/14/2023] Open
Abstract
Background: Numerous cyanobacteria have the potential to reduce metallic ions to form pure metal nanoparticles in a green biosynthesis process. Aim: To investigate the production capacity of silver nanoparticles by the cyanobacterium Cyanothece sp. and to examine the effect of five different phytohormones, indole acetic acid, kinetin; gibberellic acid; abscisic acid; and methyl jasmonate, on this capacity. Methods: The cyanobacterial strain was grown for 60 days and the harvested cyanobacterium biomass was incubated with 0.1 mM of AgNO3. Percentage conversion of Ag+ to Ag0 was calculated to indicate the AgNPs’ production capacity. Different concentrations of the five phytohormones were added to cultures and the AgNP production was monitored throughout different time intervals. Results: Cyanothece sp. biosynthesized spherical AgNPs (diameter range 70 to 140 nm, average diameter 84.37 nm). The addition of indole acetic acid and kinetin provoked the maximum conversion (87.29% and 55.16%, respectively) of Ag+ to Ag0, exceeding or slightly below that of the control (56%). Gibberellic and abscisic acids failed to elevate the Ag+ to Ag0 conversion rate (45.23% and 47.95%, respectively) above that of the control. Methyl jasmonate increased the Ag+ to Ag0 conversion rate to 90.29%, although nearly all the cyanobacterial cultures died at the end. Conclusion: Phytohormones could be used to induce or inhibit the green production of AgNPs with the cyanobacterium Cyanothece sp. This novel manipulation technique may have several applications in agriculture or biomedicine.
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Affiliation(s)
- Maged E. Mohamed
- Pharmaceutical Sciences Department, College of Clinical Pharmacy, King Faisal University, Al-Ahsa 31982, Saudi Arabia;
- Pharmacognosy Department, College of Pharmacy, Zagazig University, Zagazig 44519, Egypt
- Correspondence: (M.E.M.); (N.A.E.S.)
| | - Nermin A. El Semary
- Biological Sciences Department, College of Science, King Faisal University, Al-Ahsa 31982, Saudi Arabia
- Botany and Microbiology Department, Faculty of Science, Helwan University, Ain Helwan, Cairo 11975, Egypt
- Correspondence: (M.E.M.); (N.A.E.S.)
| | - Nancy S. Younis
- Pharmaceutical Sciences Department, College of Clinical Pharmacy, King Faisal University, Al-Ahsa 31982, Saudi Arabia;
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Bazihizina N, Vita F, Balestrini R, Kiferle C, Caparrotta S, Ghignone S, Atzori G, Mancuso S, Shabala S. Early signalling processes in roots play a crucial role in the differential salt tolerance in contrasting Chenopodium quinoa accessions. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:292-306. [PMID: 34436573 DOI: 10.1093/jxb/erab388] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Accepted: 08/23/2021] [Indexed: 06/13/2023]
Abstract
Significant variation in epidermal bladder cell (EBC) density and salt tolerance (ST) exists amongst quinoa accessions, suggesting that salt sequestration in EBCs is not the only mechanism conferring ST in this halophyte. In order to reveal other traits that may operate in tandem with salt sequestration in EBCs and whether these additional tolerance mechanisms acted mainly at the root or shoot level, two quinoa (Chenopodium quinoa) accessions with contrasting ST and EBC densities (Q30, low ST with high EBC density versus Q68, with high ST and low EBC density) were studied. The results indicate that responses in roots, rather than in shoots, contributed to the greater ST in the accession with low EBC density. In particular, the tolerant accession had improved root plasma membrane integrity and K+ retention in the mature root zone in response to salt. Furthermore, superior ST in the tolerant Q68 was associated with faster and root-specific H2O2 accumulation and reactive oxygen species-induced K+ and Ca2+ fluxes in the root apex within 30 min after NaCl application. This was found to be associated with the constitutive up-regulation of the membrane-localized receptor kinases regulatory protein FERONIA in the tolerant accession. Taken together, this study shows that differential root signalling events upon salt exposure are essential for the halophytic quinoa; the failure to do this limits quinoa adaptation to salinity, independently of salt sequestration in EBCs.
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Affiliation(s)
- Nadia Bazihizina
- Department of Agrifood Production and Environmental Sciences, Università degli Studi di Firenze, Florence, Italy
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
| | - Federico Vita
- Department of Agrifood Production and Environmental Sciences, Università degli Studi di Firenze, Florence, Italy
| | - Raffaella Balestrini
- National Research Council, Institute for Sustainable Plant Protection, Turin, Italy
| | - Claudia Kiferle
- Plantlab, Institute of Life Sciences, Sant'Anna School of Advanced Studies, Pisa, Italy
| | - Stefania Caparrotta
- Department of Agrifood Production and Environmental Sciences, Università degli Studi di Firenze, Florence, Italy
| | - Stefano Ghignone
- National Research Council, Institute for Sustainable Plant Protection, Turin, Italy
| | - Giulia Atzori
- Department of Agrifood Production and Environmental Sciences, Università degli Studi di Firenze, Florence, Italy
| | - Stefano Mancuso
- Department of Agrifood Production and Environmental Sciences, Università degli Studi di Firenze, Florence, Italy
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
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21
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Rawat N, Wungrampha S, Singla-Pareek SL, Yu M, Shabala S, Pareek A. Rewilding staple crops for the lost halophytism: Toward sustainability and profitability of agricultural production systems. MOLECULAR PLANT 2022; 15:45-64. [PMID: 34915209 DOI: 10.1016/j.molp.2021.12.003] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 12/10/2021] [Accepted: 12/12/2021] [Indexed: 06/14/2023]
Abstract
Abiotic stress tolerance has been weakened during the domestication of all major staple crops. Soil salinity is a major environmental constraint that impacts over half of the world population; however, given the increasing reliance on irrigation and the lack of available freshwater, agriculture in the 21st century will increasingly become saline. Therefore, global food security is critically dependent on the ability of plant breeders to create high-yielding staple crop varieties that will incorporate salinity tolerance traits and account for future climate scenarios. Previously, we have argued that the current agricultural practices and reliance on crops that exclude salt from uptake is counterproductive and environmentally unsustainable, and thus called for a need for a major shift in a breeding paradigm to incorporate some halophytic traits that were present in wild relatives but were lost in modern crops during domestication. In this review, we provide a comprehensive physiological and molecular analysis of the key traits conferring crop halophytism, such as vacuolar Na+ sequestration, ROS desensitization, succulence, metabolic photosynthetic switch, and salt deposition in trichomes, and discuss the strategies for incorporating them into elite germplasm, to address a pressing issue of boosting plant salinity tolerance.
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Affiliation(s)
- Nishtha Rawat
- Stress Physiology and Molecular Biology Lab, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Silas Wungrampha
- Stress Physiology and Molecular Biology Lab, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Sneh L Singla-Pareek
- Plant Stress Biology, International Centre for Genetic Engineering and Biotechnology, New Delhi 110067, India
| | - Min Yu
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China; Tasmanian Institute for Agriculture, University of Tasmania, Hobart Tas 7001, Australia.
| | - Ashwani Pareek
- Stress Physiology and Molecular Biology Lab, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India; National Agri-Food Biotechnology Institute, Mohali 140306, India.
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22
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Wahid I, Rani P, Kumari S, Ahmad R, Hussain SJ, Alamri S, Tripathy N, Khan MIR. Biosynthesized gold nanoparticles maintained nitrogen metabolism, nitric oxide synthesis, ions balance, and stabilizes the defense systems to improve salt stress tolerance in wheat. CHEMOSPHERE 2022; 287:132142. [PMID: 34826894 DOI: 10.1016/j.chemosphere.2021.132142] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 08/11/2021] [Accepted: 08/31/2021] [Indexed: 05/15/2023]
Abstract
Green synthesis of nanoparticles (NPs) is competent in inducing physiological responses in plants for combating the abiotic stresses. Considering this, salt stress is one of the most alarming conditions that exerts complex and polygenic impacts on morph-physiological functioning of plants; resulting in reduced crop productivity and yield. Therefore, understanding the salt responses and tolerance mechanisms are important for sustaining crop productivity. In the current study, we have examined the effects of biosynthesized gold nanoparticles (AuNPs) on wheat (Triticum aestivum) plants under salt stress. Green-synthesized AuNPs were found beneficial in modulating the K+/Na+ ratio, chlorophyll concentration, defense systems, nitrogen assimilation, stomatal dynamics and growth traits under salt stress condition. Furthermore, the excessive accumulation of oxidative stress markers including reactive oxygen/nitrogen species was controlled in response of AuNPs treatment under salt stress. Overall, modulation of these traits commanded to induce salt stress tolerance in wheat plants.
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Affiliation(s)
- Iram Wahid
- Department of Biosciences, Integral University, Lucknow, India
| | - Pratibha Rani
- Department of Botany, Jamia Hamdard, New Delhi, India
| | - Sarika Kumari
- Department of Botany, Jamia Hamdard, New Delhi, India
| | - Rafiq Ahmad
- Centre for Nanoscience and Nanotechnology, Jamia Millia Islamia (A Central University), New Delhi, India
| | - Sofi J Hussain
- Department of Botany, Government Degree College, Kokernag, Jammu & Kashmir, India
| | - Saud Alamri
- Department of Botany and Microbiology, College of Science, King Saud University, Saudi Arabia
| | - Nirmalya Tripathy
- Department of Pharmacy, Oregon State University, Corvallis, United States
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23
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Abd El-Moneim D, ELsarag EIS, Aloufi S, El-Azraq AM, ALshamrani SM, Safhi FAA, Ibrahim AA. Quinoa ( Chenopodium quinoa Willd.): Genetic Diversity According to ISSR and SCoT Markers, Relative Gene Expression, and Morpho-Physiological Variation under Salinity Stress. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10122802. [PMID: 34961273 PMCID: PMC8707205 DOI: 10.3390/plants10122802] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Revised: 12/08/2021] [Accepted: 12/14/2021] [Indexed: 06/14/2023]
Abstract
Quinoa (Chenopodium quinoa Willd.) is a halophytic crop that can withstand a variety of abiotic stresses, including salt. The present research examined the mechanisms of salt tolerance in five different quinoa genotypes at four different salinity levels (control (60), 80, 120, and 160 mM NaCl). ISSR and SCoT analysis revealed high polymorphism percentages of 90.91% and 85.26%, respectively. Furthermore, ISSR 1 and SCoT 7 attained the greatest number of polymorphic amplicons (27 and 26), respectively. Notably, LINE-6 and M-28 genotypes demonstrated the greatest number of unique positive and negative amplicons (50 and 42) generated from ISSR and SCoT, respectively. Protein pattern analysis detected 11 bands with a polymorphism percentage 27.27% among the quinoa genotypes, with three unique bands distinguishable for the M-28 genotype. Similarity correlation indicated that the highest similarity was between S-10 and Regeolone-3 (0.657), while the lowest similarity was between M-28 and LINE-6 (0.44). Significant variations existed among the studied salinity treatments, genotypes, and the interactions between them. The highest and lowest values for all the studied morpho-physiological and biochemical traits were recorded at 60 and 160 mM NaCl concentrations, respectively, except for the Na and proline contents, which exhibited the opposite relationship. The M-28 genotype demonstrated the highest values for all studied characteristics, while the LINE-6 genotype represented the lowest in both seasons. On the other hand, mRNA transcript levels for CqSOS1 did not exhibit differential expression in roots and leaf tissues, while the expression of CqNHX1 was upregulated more in both tissues for the M-28 genotype than for the LINE-6 genotype, and its maximum induction was seen in the leaves. Overall, the genotypes M-28 and LINE-6 were identified as the most and least salinity-tolerant, respectively.
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Affiliation(s)
- Diaa Abd El-Moneim
- Department of Plant Production (Genetic Branch), Faculty of Environmental and Agricultural Sciences, Arish University, El-Arish 45511, Egypt
| | - Eman I. S. ELsarag
- Department of Plant Production (Agronomy Branch), Faculty of Environmental and Agricultural Sciences, Arish University, El-Arish 45511, Egypt; (E.I.S.E.); (A.M.E.-A.)
| | - Salman Aloufi
- Department of Biotechnology, Faculty of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia;
| | - Asmaa M. El-Azraq
- Department of Plant Production (Agronomy Branch), Faculty of Environmental and Agricultural Sciences, Arish University, El-Arish 45511, Egypt; (E.I.S.E.); (A.M.E.-A.)
| | - Salha Mesfer ALshamrani
- Department of Biology, College of Science, University of Jeddah, Jeddah 21959, Saudi Arabia;
| | - Fatmah Ahmed Ahmed Safhi
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, Riyadh 11671, Saudi Arabia;
| | - Amira A. Ibrahim
- Plant Protection and Biomolecular Diagnosis Department, Arid Lands Cultivation Research Institute, City of Scientific Research and Technological Applications, New Borg El-Arab, Alexandria 21934, Egypt
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24
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Dreyer I. Nutrient cycling is an important mechanism for homeostasis in plant cells. PLANT PHYSIOLOGY 2021; 187:2246-2261. [PMID: 34890457 PMCID: PMC8644529 DOI: 10.1093/plphys/kiab217] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 04/23/2021] [Indexed: 05/02/2023]
Abstract
Homeostasis in living cells refers to the steady state of internal, physical, and chemical conditions. It is sustained by self-regulation of the dynamic cellular system. To gain insight into the homeostatic mechanisms that maintain cytosolic nutrient concentrations in plant cells within a homeostatic range, we performed computational cell biology experiments. We mathematically modeled membrane transporter systems and simulated their dynamics. Detailed analyses of 'what-if' scenarios demonstrated that a single transporter type for a nutrient, irrespective of whether it is a channel or a cotransporter, is not sufficient to calibrate a desired cytosolic concentration. A cell cannot flexibly react to different external conditions. Rather, at least two different transporter types for the same nutrient, which are energized differently, are required. The gain of flexibility in adjusting a cytosolic concentration was accompanied by the establishment of energy-consuming cycles at the membrane, suggesting that these putatively "futile" cycles are not as futile as they appear. Accounting for the complex interplay of transporter networks at the cellular level may help design strategies for increasing nutrient use efficiency of crop plants.
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Affiliation(s)
- Ingo Dreyer
- Center of Bioinformatics, Simulation and Modeling (CBSM), Faculty of Engineering, Universidad de Talca, Talca CL-3460000, Chile
- Author for communication:
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25
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Venkataraman G, Shabala S, Véry AA, Hariharan GN, Somasundaram S, Pulipati S, Sellamuthu G, Harikrishnan M, Kumari K, Shabala L, Zhou M, Chen ZH. To exclude or to accumulate? Revealing the role of the sodium HKT1;5 transporter in plant adaptive responses to varying soil salinity. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 169:333-342. [PMID: 34837866 DOI: 10.1016/j.plaphy.2021.11.030] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Revised: 11/13/2021] [Accepted: 11/16/2021] [Indexed: 06/13/2023]
Abstract
Arid/semi-arid and coastal agricultural areas of the world are especially vulnerable to climate change-driven soil salinity. Salinity tolerance in plants is a complex trait, with salinity negatively affecting crop yield. Plants adopt a range of mechanisms to combat salinity, with many transporter genes being implicated in Na+-partitioning processes. Within these, the high-affinity K+ (HKT) family of transporters play a critical role in K+ and Na+ homeostasis in plants. Among HKT transporters, Type I transporters are Na+-specific. While Arabidopsis has only one Na + -specific HKT (AtHKT1;1), cereal crops have a multiplicity of Type I and II HKT transporters. AtHKT1; 1 (Arabidopsis thaliana) and HKT1; 5 (cereal crops) 'exclude' Na+ from the xylem into xylem parenchyma in the root, reducing shoot Na+ and hence, confer sodium tolerance. However, more recent data from Arabidopsis and crop species show that AtHKT1;1/HKT1;5 alleles have a strong genetic association with 'shoot sodium accumulation' and concomitant salt tolerance. The review tries to resolve these two seemingly contradictory effects of AtHKT1;1/HKT1;5 operation (shoot exclusion vs shoot accumulation), both conferring salinity tolerance and suggests that contrasting phenotypes are attributable to either hyper-functional or weak AtHKT1;1/HKT1;5 alleles/haplotypes and are under strong selection by soil salinity levels. It also suggests that opposite balancing mechanisms involving xylem ion loading in these contrasting phenotypes exist that require transporters such as SOS1 and CCC. While HKT1; 5 is a crucial but not sole determinant of salinity tolerance, investigation of the adaptive benefit(s) conferred by naturally occurring intermediate HKT1;5 alleles will be important under a climate change scenario.
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Affiliation(s)
- Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, 600113, India.
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia; International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528000, China.
| | - Anne-Aliénor Véry
- Biochimie & Physiologie Moléculaire des Plantes, UMR Univ. Montpellier, CNRS, INRAE, Institut Agro, 34060, Montpellier Cedex 2, France.
| | - Gopalasamudram Neelakantan Hariharan
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, 600113, India
| | - Suji Somasundaram
- Department of Biotechnology, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Chennai, 600124, India
| | - Shalini Pulipati
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, 600113, India
| | - Gothandapani Sellamuthu
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, 600113, India; Forest Molecular Entomology Laboratory, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences Prague (CZU), Kamycka 129, Praha, 16500, Czech Republic
| | - Mohan Harikrishnan
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, 600113, India
| | - Kumkum Kumari
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, 600113, India
| | - Lana Shabala
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, College of Science and Engineering, University of Tasmania, Private Bag 98, Hobart, Tas, 7001, Australia
| | - Zhong-Hua Chen
- School of Science, Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, 2751, Australia
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26
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Wang C, Xiang Y, Qian D. Current progress in plant V-ATPase: From biochemical properties to physiological functions. JOURNAL OF PLANT PHYSIOLOGY 2021; 266:153525. [PMID: 34560396 DOI: 10.1016/j.jplph.2021.153525] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Revised: 09/12/2021] [Accepted: 09/12/2021] [Indexed: 06/13/2023]
Abstract
Vacuolar-type adenosine triphosphatase (V-ATPase, VHA) is a highly conserved, ATP-driven multisubunit proton pump that is widely distributed in all eukaryotic cells. V-ATPase consists of two domains formed by at least 13 different subunits, the membrane peripheral V1 domain responsible for ATP hydrolysis, and the membrane-integral V0 domain responsible for proton translocation. V-ATPase plays an essential role in energizing secondary active transport and is indispensable to plants. In addition to multiple stress responses, plant V-ATPase is also implicated in physiological processes such as growth, development, and morphogenesis. Based on the identification of distinct V-ATPase mutants and advances in luminal pH measurements in vivo, it has been revealed that this holoenzyme complex plays a pivotal role in pH homeostasis of the plant endomembrane system and endocytic and secretory trafficking. Here, we review recent progress in comprehending the biochemical properties and physiological functions of plant V-ATPase and explore the topics that require further elucidation.
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Affiliation(s)
- Chao Wang
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, China
| | - Yun Xiang
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, China
| | - Dong Qian
- MOE Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, 730000, China.
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27
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Razzaq A, Wani SH, Saleem F, Yu M, Zhou M, Shabala S. Rewilding crops for climate resilience: economic analysis and de novo domestication strategies. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:6123-6139. [PMID: 34114599 DOI: 10.1093/jxb/erab276] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 06/09/2021] [Indexed: 05/08/2023]
Abstract
To match predicted population growth, annual food production should be doubled by 2050. This is not achievable by current agronomical and breeding practices, due to the impact of climate changes and associated abiotic stresses on agricultural production systems. Here, we analyze the impact of global climate trends on crop productivity and show that the overall loss in crop production from climate-driven abiotic stresses may exceed US$170 billion year-1 and represents a major threat to global food security. We also show that abiotic stress tolerance had been present in wild progenitors of modern crops but was lost during their domestication. We argue for a major shift in our paradigm of crop breeding, focusing on climate resilience, and call for a broader use of wild relatives as a major tool in this process. We argue that, while molecular tools are currently in place to harness the potential of climate-resilient genes present in wild relatives, the complex polygenic nature of tolerance traits remains a major bottleneck in this process. Future research efforts should be focused not only on finding appropriate wild relatives but also on development of efficient cell-based high-throughput phenotyping platforms allowing assessment of the in planta operation of key genes.
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Affiliation(s)
- Ali Razzaq
- Centre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisald 38040,Pakistan
| | - Shabir Hussain Wani
- Mountain Research Center for Field Crops, Khudwani, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, J&K,India
| | - Fozia Saleem
- Centre of Agricultural Biochemistry and Biotechnology (CABB), University of Agriculture, Faisald 38040,Pakistan
| | - Min Yu
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000,China
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas 7001,Australia
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000,China
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tas 7001,Australia
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28
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Zhou T, Yue CP, Liu Y, Zhang TY, Huang JY, Hua YP. Multiomics reveal pivotal roles of sodium translocation and compartmentation in regulating salinity resistance in allotetraploid rapeseed. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:5687-5708. [PMID: 33989425 DOI: 10.1093/jxb/erab215] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2021] [Accepted: 05/12/2021] [Indexed: 05/20/2023]
Abstract
The large size and complexity of the allotetraploid rapeseed (Brassica napus) genome present huge challenges for understanding salinity resistance in this important crop. In this study, we identified two rapeseed genotypes with significantly different degrees of salinity resistance and examined the underlying mechanisms using an integrated analysis of phenomics, ionomics, genomics, and transcriptomics. Under salinity, a higher accumulation of osmoregulation substances and better root-system architecture was observed in the resistant genotype, H159, than in the sensitive one, L339. A lower shoot Na+ concentration and a higher root vacuolar Na+ concentration indicated lower root-to-shoot translocation and higher compartmentation in H159 than in L339. Whole-genome re-sequencing (WGRS) and transcriptome sequencing identified numerous DNA variants and differentially expressed genes involved in abiotic stress responses and ion transport. Combining ionomics with transcriptomics identified plasma membrane-localized BnaC2.HKT1;1 and tonoplast-localized BnaC5.NHX2 as the central factors regulating differential root xylem unloading and vacuolar sequestration of Na+ between the two genotypes. Identification of polymorphisms by WGRS and PCR revealed two polymorphic MYB-binding sites in the promoter regions that might determine the differential gene expression of BnaC2.HKT1;1 and BnaC5.NHX2. Our multiomics approach thus identified core transporters involved in Na+ translocation and compartmentation that regulate salinity resistance in rapeseed. Our results may provide elite gene resources for the improvement of salinity resistance in this crop, and our multiomics approach can be applied to other similar studies.
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Affiliation(s)
- Ting Zhou
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
| | - Cai-Peng Yue
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
| | - Ying Liu
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
| | - Tian-Yu Zhang
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
| | - Jin-Yong Huang
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
| | - Ying-Peng Hua
- School of Agricultural Sciences, Zhengzhou University, Zhengzhou, China
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29
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Tang X, Zhang H, Shabala S, Li H, Yang X, Zhang H. Tissue tolerance mechanisms conferring salinity tolerance in a halophytic perennial species Nitraria sibirica Pall. TREE PHYSIOLOGY 2021; 41:1264-1277. [PMID: 33367891 DOI: 10.1093/treephys/tpaa174] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2020] [Accepted: 12/15/2020] [Indexed: 06/12/2023]
Abstract
Plant salt tolerance relies on a coordinated functioning of different tissues and organs. Salinity tissue tolerance is one of the key traits that confer plant adaptation to saline environment. This trait implies maintenance low cytosolic Na+/K+ ratio in metabolically active cellular compartments. In this study, we used Nitraria sibirica Pall., a perennial woody halophyte species, to understand the mechanistic basis of its salinity tissue tolerance. The results showed that the growth of seedlings was stimulated by 100-200 mM NaCl treatment. The ions distribution analysis showed that the leaves act as an Na+ sink, while the plant roots possess superior K+ retention. The excessive Na+ absorbed from the soil was mainly transported to the shoot and was eventuallysequestrated into mesophyll vacuoles in the leaves. As a result, N. sibirica could keep the optimal balance of K+/Na+ at a tissue- and cell-specific level under saline condition. To enable this, N. sibirica increased both vacuolar H+-ATPase and H+-PPase enzymes activities and up-regulated the expressions of NsVHA, NsVP1 and NsNHX1 genes. Vacuolar Na+ sequestration in the leaf mesophyll, mediated by NsVHA, NsVP1 and NsNHX1, reduced the Na+ concentration in cytosol and inhibited further K+ loss. Meanwhile, N. sibirica enhanced the Two Pore K+ expression at the transcriptional level to promote K+ efflux from vacuole into cytoplasm, assisting in maintaining cytosolic K+ homeostasis. It is concluded that the tissue tolerance traits such as vacuolar Na+ sequestration and intracellular K+ homeostasis are critical to confer adaptation of N. sibirica to soil salinity.
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Affiliation(s)
- Xiaoqian Tang
- Research Center of Saline and Alkali Land of National Forestry and Grassland Administration, Chinese Academy of Forestry, Beijing 10091, China
| | - Huilong Zhang
- Research Center of Saline and Alkali Land of National Forestry and Grassland Administration, Chinese Academy of Forestry, Beijing 10091, China
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania 7001, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan Guangdong 528000, China
| | - Huanyong Li
- Tianjin Academy of Agricultural Sciences, Tianjin 300384, China
| | - Xiuyan Yang
- Research Center of Saline and Alkali Land of National Forestry and Grassland Administration, Chinese Academy of Forestry, Beijing 10091, China
| | - Huaxin Zhang
- Research Center of Saline and Alkali Land of National Forestry and Grassland Administration, Chinese Academy of Forestry, Beijing 10091, China
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30
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Solis CA, Yong MT, Venkataraman G, Milham P, Zhou M, Shabala L, Holford P, Shabala S, Chen ZH. Sodium sequestration confers salinity tolerance in an ancestral wild rice. PHYSIOLOGIA PLANTARUM 2021; 172:1594-1608. [PMID: 33619741 DOI: 10.1111/ppl.13352] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2020] [Revised: 01/07/2021] [Accepted: 01/26/2021] [Indexed: 05/27/2023]
Abstract
Wild rice Oryza rufipogon, a progenitor of cultivated rice Oryza sativa L., possesses superior salinity tolerance and is a potential donor for breeding salinity tolerance traits in rice. However, a mechanistic basis of salinity tolerance in this donor species has not been established. Here, we examined salinity tolerance from the early vegetative stage to maturity in O. rufipogon in comparison with a salt-susceptible (Koshihikari) and a salt-tolerant (Reiziq) variety of O. sativa. We assessed their phylogeny and agronomical traits, photosynthetic performance, ion contents, as well as gene expression in response to salinity stress. Salt-tolerant O. rufipogon exhibited efficient leaf photosynthesis and less damage to leaf tissues during the course of salinity treatment. In addition, O. rufipogon showed a significantly higher tissue Na+ accumulation that is achieved by vacuolar sequestration compared to the salt tolerant O. sativa indica subspecies. These findings are further supported by the upregulation of genes involved with ion transport and sequestration (e.g. high affinity K+ transporter 1;4 [HKT1;4], Na+ /H+ exchanger 1 [NHX1] and vacuolar H+ -ATPase c [VHA-c]) in salt-tolerant O. rufipogon as well as by the close phylogenetic relationship of key salt-responsive genes in O. rufipogon to these in salt-tolerant wild rice species such as O. coarctata. Thus, the high accumulation of Na+ in the leaves of O. rufipogon acts as a cheap osmoticum to minimize the high energy cost of osmolyte biosynthesis and excessive reactive oxygen species production. These mechanisms demonstrated that O. rufipogon has important traits that can be used for improving salinity tolerance in cultivated rice.
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Affiliation(s)
- Celymar Angela Solis
- School of Science, Western Sydney University, Penrith, New South Wales, Australia
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, Australia
| | - Miing-Tiem Yong
- School of Science, Western Sydney University, Penrith, New South Wales, Australia
| | - Gayatri Venkataraman
- Plant Molecular Biology Laboratory, M. S. Swaminathan Research Foundation, III Cross Street, Taramani Institutional Area, Chennai, India
| | - Paul Milham
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, Australia
| | - Lana Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, Australia
| | - Paul Holford
- School of Science, Western Sydney University, Penrith, New South Wales, Australia
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, Tasmania, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, New South Wales, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales, Australia
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31
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Sagervanshi A, Naeem A, Geilfus CM, Kaiser H, Mühling KH. One-time abscisic acid priming induces long-term salinity resistance in Vicia faba: Changes in key transcripts, metabolites, and ionic relations. PHYSIOLOGIA PLANTARUM 2021; 172:146-161. [PMID: 33314239 DOI: 10.1111/ppl.13315] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Revised: 11/30/2020] [Accepted: 12/09/2020] [Indexed: 06/12/2023]
Abstract
Abscisic acid (ABA) priming is known to enhance plant growth and survival under salinity. However, the mechanisms mediating this long-term acclimatization to salt stress are still obscure. Specifically, the long-term transcriptional changes and their effects on ion relations were never investigated. This motivated us to study the long-term (8 days) effect of one-time 24 h root priming treatment with 10 μM ABA on transcription levels of relevant regulated key genes, osmotically relevant metabolites, and ionic concentrations in Vicia faba grown under 50 mM NaCl salinity. The novelty of this study is that we could demonstrate long-term effects of a one-time ABA application. ABA-priming was found to prevent the salt-induced decline in root and shoot dry matter, improved photosynthesis, and inhibited terminal wilting of plants. It substantially increased the mRNA level of AAPK and 14-3-3 ABA inducible kinases and ion transporters (PM H+ -ATPase, VFK1, KUP7, SOS1, and CLC1). These ABA-induced transcriptional changes went along with altered tissue ion patterns. Primed plants accumulated less Na+ and Cl- but more K+ , Ca2+ , Zn2+ , Fe2+ , Mn2+ , NO3 - , and SO4 2- . Priming changed the composition pattern of organic osmolytes under salinity, with glucose and fructose being dominant in unprimed, whereas sucrose was dominant in the primed plants. We conclude that one-time ABA priming mitigates salt stress in Vicia faba by persistently changing transcription patterns of key genes, stabilizing the ionic and osmotic balance, and improving photosynthesis and growth.
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Affiliation(s)
- Amit Sagervanshi
- Institute of Plant Nutrition and Soil Science, Kiel University, Kiel, Germany
| | - Asif Naeem
- Institute of Plant Nutrition and Soil Science, Kiel University, Kiel, Germany
| | - Christoph-Martin Geilfus
- Institute of Plant Nutrition and Soil Science, Kiel University, Kiel, Germany
- Division of Controlled Environment Horticulture, Faculty of Life Sciences, Albrecht Daniel Thaer-Institute of Agricultural and Horticultural Sciences, Humboldt-University of Berlin, Berlin, Germany
| | - Hartmut Kaiser
- Institute of Plant Nutrition and Soil Science, Kiel University, Kiel, Germany
| | - Karl H Mühling
- Institute of Plant Nutrition and Soil Science, Kiel University, Kiel, Germany
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Karahara I, Horie T. Functions and structure of roots and their contributions to salinity tolerance in plants. BREEDING SCIENCE 2021; 71:89-108. [PMID: 33762879 PMCID: PMC7973495 DOI: 10.1270/jsbbs.20123] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 12/15/2020] [Indexed: 05/03/2023]
Abstract
Soil salinity is an increasing threat to the productivity of glycophytic crops worldwide. The root plays vital roles under various stress conditions, including salinity, as well as has diverse functions in non-stress soil environments. In this review, we focus on the essential functions of roots such as in ion homeostasis mediated by several different membrane transporters and signaling molecules under salinity stress and describe recent advances in the impacts of quantitative trait loci (QTLs) or genetic loci (and their causal genes, if applicable) on salinity tolerance. Furthermore, we introduce important literature for the development of barriers against the apoplastic flow of ions, including Na+, as well as for understanding the functions and components of the barrier structure under salinity stress.
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Affiliation(s)
- Ichirou Karahara
- Department of Biology, Faculty of Science, University of Toyama, Toyama 930-8555, Japan
| | - Tomoaki Horie
- Division of Applied Biology, Faculty of Textile Science and Technology, Shinshu University, 3-15-1 Tokida, Ueda, Nagano 386-8567, Japan
- Corresponding author (e-mail: )
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33
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Pottosin I, Olivas-Aguirre M, Dobrovinskaya O, Zepeda-Jazo I, Shabala S. Modulation of Ion Transport Across Plant Membranes by Polyamines: Understanding Specific Modes of Action Under Stress. FRONTIERS IN PLANT SCIENCE 2021; 11:616077. [PMID: 33574826 PMCID: PMC7870501 DOI: 10.3389/fpls.2020.616077] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Accepted: 12/14/2020] [Indexed: 05/20/2023]
Abstract
This work critically discusses the direct and indirect effects of natural polyamines and their catabolites such as reactive oxygen species and γ-aminobutyric acid on the activity of key plant ion-transporting proteins such as plasma membrane H+ and Ca2+ ATPases and K+-selective and cation channels in the plasma membrane and tonoplast, in the context of their involvement in stress responses. Docking analysis predicts a distinct binding for putrescine and longer polyamines within the pore of the vacuolar TPC1/SV channel, one of the key determinants of the cell ionic homeostasis and signaling under stress conditions, and an additional site for spermine, which overlaps with the cytosolic regulatory Ca2+-binding site. Several unresolved problems are summarized, including the correct estimates of the subcellular levels of polyamines and their catabolites, their unexplored effects on nucleotide-gated and glutamate receptor channels of cell membranes and Ca2+-permeable and K+-selective channels in the membranes of plant mitochondria and chloroplasts, and pleiotropic mechanisms of polyamines' action on H+ and Ca2+ pumps.
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Affiliation(s)
- Igor Pottosin
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
- Biomedical Center, University of Colima, Colima, Mexico
| | | | | | - Isaac Zepeda-Jazo
- Food Genomics Department, Universidad de La Ciénega del Estado de Michoacán de Ocampo, Sahuayo, Mexico
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
- Tasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, TAS, Australia
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34
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Dreyer I, Sussmilch FC, Fukushima K, Riadi G, Becker D, Schultz J, Hedrich R. How to Grow a Tree: Plant Voltage-Dependent Cation Channels in the Spotlight of Evolution. TRENDS IN PLANT SCIENCE 2021; 26:41-52. [PMID: 32868178 DOI: 10.1016/j.tplants.2020.07.011] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2020] [Revised: 07/21/2020] [Accepted: 07/23/2020] [Indexed: 06/11/2023]
Abstract
Phylogenetic analysis can be a powerful tool for generating hypotheses regarding the evolution of physiological processes. Here, we provide an updated view of the evolution of the main cation channels in plant electrical signalling: the Shaker family of voltage-gated potassium channels and the two-pore cation (K+) channel (TPC1) family. Strikingly, the TPC1 family followed the same conservative evolutionary path as one particular subfamily of Shaker channels (Kout) and remained highly invariant after terrestrialisation, suggesting that electrical signalling was, and remains, key to survival on land. We note that phylogenetic analyses can have pitfalls, which may lead to erroneous conclusions. To avoid these in the future, we suggest guidelines for analyses of ion channel evolution in plants.
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Affiliation(s)
- Ingo Dreyer
- Center for Bioinformatics, Simulation and Modeling (CBSM), Faculty of Engineering, Universidad de Talca, 2 Norte 685, Talca, Chile.
| | - Frances C Sussmilch
- Institute for Molecular Plant Physiology and Biophysics, University of Würzburg, Julius-von-Sachs-Platz 2, D-97082 Würzburg, Germany; School of Natural Sciences, University of Tasmania, Hobart, TAS 7001, Australia
| | - Kenji Fukushima
- Institute for Molecular Plant Physiology and Biophysics, University of Würzburg, Julius-von-Sachs-Platz 2, D-97082 Würzburg, Germany
| | - Gonzalo Riadi
- Center for Bioinformatics, Simulation and Modeling (CBSM), Faculty of Engineering, Universidad de Talca, 2 Norte 685, Talca, Chile
| | - Dirk Becker
- Institute for Molecular Plant Physiology and Biophysics, University of Würzburg, Julius-von-Sachs-Platz 2, D-97082 Würzburg, Germany
| | - Jörg Schultz
- Department of Bioinformatics, Biozentrum, University of Würzburg, Am Hubland, D-97074 Würzburg, Germany
| | - Rainer Hedrich
- Institute for Molecular Plant Physiology and Biophysics, University of Würzburg, Julius-von-Sachs-Platz 2, D-97082 Würzburg, Germany.
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35
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Cosse M, Seidel T. Plant Proton Pumps and Cytosolic pH-Homeostasis. FRONTIERS IN PLANT SCIENCE 2021; 12:672873. [PMID: 34177988 PMCID: PMC8220075 DOI: 10.3389/fpls.2021.672873] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Accepted: 04/15/2021] [Indexed: 05/06/2023]
Abstract
Proton pumps create a proton motif force and thus, energize secondary active transport at the plasma nmembrane and endomembranes of the secretory pathway. In the plant cell, the dominant proton pumps are the plasma membrane ATPase, the vacuolar pyrophosphatase (V-PPase), and the vacuolar-type ATPase (V-ATPase). All these pumps act on the cytosolic pH by pumping protons into the lumen of compartments or into the apoplast. To maintain the typical pH and thus, the functionality of the cytosol, the activity of the pumps needs to be coordinated and adjusted to the actual needs. The cellular toolbox for a coordinated regulation comprises 14-3-3 proteins, phosphorylation events, ion concentrations, and redox-conditions. This review combines the knowledge on regulation of the different proton pumps and highlights possible coordination mechanisms.
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36
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Isayenkov SV, Dabravolski SA, Pan T, Shabala S. Phylogenetic Diversity and Physiological Roles of Plant Monovalent Cation/H + Antiporters. FRONTIERS IN PLANT SCIENCE 2020; 11:573564. [PMID: 33123183 PMCID: PMC7573149 DOI: 10.3389/fpls.2020.573564] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Accepted: 09/02/2020] [Indexed: 05/23/2023]
Abstract
The processes of plant nutrition, stress tolerance, plant growth, and development are strongly dependent on transport of mineral nutrients across cellular membranes. Plant membrane transporters are key components of these processes. Among various membrane transport proteins, the monovalent cation proton antiporter (CPA) superfamily mediates a broad range of physiological and developmental processes such as ion and pH homeostasis, development of reproductive organs, chloroplast operation, and plant adaptation to drought and salt stresses. CPA family includes plasma membrane-bound Na+/H+ exchanger (NhaP) and intracellular Na+/H+ exchanger NHE (NHX), K+ efflux antiporter (KEA), and cation/H+ exchanger (CHX) family proteins. In this review, we have completed the phylogenetic inventory of CPA transporters and undertaken a comprehensive evolutionary analysis of their development. Compared with previous studies, we have significantly extended the range of plant species, including green and red algae and Acrogymnospermae into phylogenetic analysis. Our data suggest that the multiplication and complexation of CPA isoforms during evolution is related to land colonisation by higher plants and associated with an increase of different tissue types and development of reproductive organs. The new data extended the number of clades for all groups of CPAs, including those for NhaP/SOS, NHE/NHX, KEA, and CHX. We also critically evaluate the latest findings on the biological role, physiological functions and regulation of CPA transporters in relation to their structure and phylogenetic position. In addition, the role of CPA members in plant tolerance to various abiotic stresses is summarized, and the future priority directions for CPA studies in plants are discussed.
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Affiliation(s)
- Stanislav V. Isayenkov
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
- Department of Plant Food Products and Biofortification, Institute of Food Biotechnology and Genomics NAS of Ukraine, Kyiv, Ukraine
| | - Siarhei A. Dabravolski
- Department of Clinical Diagnostics, Vitebsk State Academy of Veterinary Medicine [UO VGAVM], Vitebsk, Belarus
| | - Ting Pan
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
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37
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Feng X, Liu W, Qiu C, Zeng F, Wang Y, Zhang G, Chen Z, Wu F. HvAKT2 and HvHAK1 confer drought tolerance in barley through enhanced leaf mesophyll H + homoeostasis. PLANT BIOTECHNOLOGY JOURNAL 2020; 18:1683-1696. [PMID: 31917885 PMCID: PMC7336388 DOI: 10.1111/pbi.13332] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Revised: 12/27/2019] [Accepted: 01/05/2020] [Indexed: 05/18/2023]
Abstract
Plant K+ uptake typically consists low-affinity mechanisms mediated by Shaker K+ channels (AKT/KAT/KC) and high-affinity mechanisms regulated by HAK/KUP/KT transporters, which are extensively studied. However, the evolutionary and genetic roles of both K+ uptake mechanisms for drought tolerance are not fully explored in crops adapted to dryland agriculture. Here, we employed evolutionary bioinformatics, biotechnological and electrophysiological approaches to determine the role of two important K+ transporters HvAKT2 and HvHAK1 in drought tolerance in barley. HvAKT2 and HvHAK1 were cloned and functionally characterized using barley stripe mosaic virus-induced gene silencing (BSMV-VIGS) in drought-tolerant wild barley XZ5 and agrobacterium-mediated gene transfer in the barley cultivar Golden Promise. The hallmarks of the K+ selective filters of AKT2 and HAK1 are both found in homologues from strepotophyte algae, and they are evolutionarily conserved in strepotophyte algae and land plants. HvAKT2 and HvHAK1 are both localized to the plasma membrane and have high selectivity to K+ and Rb+ over other tested cations. Overexpression of HvAKT2 and HvHAK1 enhanced K+ uptake and H+ homoeostasis leading to drought tolerance in these transgenic lines. Moreover, HvAKT2- and HvHAK1-overexpressing lines showed distinct response of K+ , H+ and Ca2+ fluxes across plasma membrane and production of nitric oxide and hydrogen peroxide in leaves as compared to the wild type and silenced lines. High- and low-affinity K+ uptake mechanisms and their coordination with H+ homoeostasis play essential roles in drought adaptation of wild barley. These findings can potentially facilitate future breeding programs for resilient cereal crops in a changing global climate.
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Affiliation(s)
- Xue Feng
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
- Jiangsu Co‐Innovation Center for Modern Production Technology of Grain CropsYangzhou UniversityYangzhouChina
| | - Wenxing Liu
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
| | - Cheng‐Wei Qiu
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
- Jiangsu Co‐Innovation Center for Modern Production Technology of Grain CropsYangzhou UniversityYangzhouChina
| | - Fanrong Zeng
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
| | - Yizhou Wang
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
| | - Guoping Zhang
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
| | - Zhong‐Hua Chen
- School of ScienceHawkesbury Institute for the EnvironmentWestern Sydney UniversityPenrithNSWAustralia
- Collaborative Innovation Center for Grain IndustryCollege of AgricultureYangtze UniversityJingzhouChina
| | - Feibo Wu
- Department of AgronomyCollege of Agriculture and BiotechnologyZhejiang UniversityHangzhouChina
- Jiangsu Co‐Innovation Center for Modern Production Technology of Grain CropsYangzhou UniversityYangzhouChina
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38
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Foster KJ, Miklavcic SJ. A Comprehensive Biophysical Model of Ion and Water Transport in Plant Roots. III. Quantifying the Energy Costs of Ion Transport in Salt-Stressed Roots of Arabidopsis. FRONTIERS IN PLANT SCIENCE 2020; 11:865. [PMID: 32719693 PMCID: PMC7348042 DOI: 10.3389/fpls.2020.00865] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2019] [Accepted: 05/27/2020] [Indexed: 05/15/2023]
Abstract
Salt stress defense mechanisms in plant roots, such as active Na+ efflux and storage, require energy in the form of ATP. Understanding the energy required for these transport mechanisms is an important step toward achieving an understanding of salt tolerance. However, accurate measurements of the fluxes required to estimate these energy costs are difficult to achieve by experimental means. As a result, the magnitude of the energy costs of ion transport in salt-stressed roots relative to the available energy is unclear, as are the relative contributions of different defense mechanisms to the total cost. We used mathematical modeling to address three key questions about the energy costs of ion transport in salt-stressed Arabidopsis roots: are the energy requirements calculated on the basis of flux data feasible; which transport steps are the main contributors to the total energy costs; and which transport processes could be altered to minimize the total energy costs? Using our biophysical model of ion and water transport we calculated the energy expended in the trans-plasma membrane and trans-tonoplast transport of Na+, K+, Cl-, and H+ in different regions of a salt-stressed model Arabidopsis root. Our calculated energy costs exceeded experimental estimates of the energy supplied by root respiration for high external NaCl concentrations. We found that Na+ exclusion from, and Cl- uptake into, the outer root were the major contributors to the total energy expended. Reducing the leakage of Na+ and the active uptake of Cl- across outer root plasma membranes would lower energy costs while enhancing exclusion of these ions. The high energy cost of ion transport in roots demonstrates that the energetic consequences of altering ion transport processes should be considered when attempting to improve salt tolerance.
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Affiliation(s)
| | - Stanley J. Miklavcic
- Phenomics and Bioinformatics Research Centre, University of South Australia, Mawson Lakes, WA, Australia
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39
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Zhao C, Zhang H, Song C, Zhu JK, Shabala S. Mechanisms of Plant Responses and Adaptation to Soil Salinity. Innovation (N Y) 2020; 1:100017. [PMID: 34557705 PMCID: PMC8454569 DOI: 10.1016/j.xinn.2020.100017] [Citation(s) in RCA: 268] [Impact Index Per Article: 67.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
Soil salinity is a major environmental stress that restricts the growth and yield of crops. Understanding the physiological, metabolic, and biochemical responses of plants to salt stress and mining the salt tolerance-associated genetic resource in nature will be extremely important for us to cultivate salt-tolerant crops. In this review, we provide a comprehensive summary of the mechanisms of salt stress responses in plants, including salt stress-triggered physiological responses, oxidative stress, salt stress sensing and signaling pathways, organellar stress, ion homeostasis, hormonal and gene expression regulation, metabolic changes, as well as salt tolerance mechanisms in halophytes. Important questions regarding salt tolerance that need to be addressed in the future are discussed.
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Affiliation(s)
- Chunzhao Zhao
- Shanghai Center for Plant Stress Biology and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Heng Zhang
- State Key Laboratory of Plant Molecular Genetics, Shanghai Center for Plant Stress Biology, Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
| | - Chunpeng Song
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Jian-Kang Zhu
- Shanghai Center for Plant Stress Biology and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN 47907, USA
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia
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40
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Molina-Montenegro MA, Acuña-Rodríguez IS, Torres-Díaz C, Gundel PE, Dreyer I. Antarctic root endophytes improve physiological performance and yield in crops under salt stress by enhanced energy production and Na + sequestration. Sci Rep 2020; 10:5819. [PMID: 32242034 PMCID: PMC7118072 DOI: 10.1038/s41598-020-62544-4] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 02/17/2020] [Indexed: 11/09/2022] Open
Abstract
Climatic change is pointed as one of the major challenges for global food security. Based on current models of climate change, reduction in precipitations and in turn, increase in the soil salinity will be a sharp constraint for crops productivity worldwide. In this context, root fungi appear as a new strategy to improve plant ecophysiological performance and crop yield under abiotic stress. In this study, we evaluated the impact of the two fungal endophytes Penicillium brevicompactum and P. chrysogenum isolated from Antarctic plants on nutrients and Na+ contents, net photosynthesis, water use efficiency, yield and survival in tomato and lettuce, facing salinity stress conditions. Inoculation of plant roots with fungal endophytes resulted in greater fresh and dry biomass production, and an enhanced survival rate under salt conditions. Inoculation of plants with the fungal endophytes was related with a higher up/down-regulation of ion homeostasis by enhanced expression of the NHX1 gene. The two endophytes diminished the effects of salt stress in tomato and lettuce, provoked a higher efficiency in photosynthetic energy production and an improved sequestration of Na+ in vacuoles is suggested by the upregulating of the expression of vacuolar NHX1 Na+/H+ antiporters. Promoting plant-beneficial interactions with root symbionts appears to be an environmentally friendly strategy to mitigate the impact of climate change variables on crop production.
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Affiliation(s)
- Marco A Molina-Montenegro
- Instituto de Ciencias Biológicas, Universidad de Talca, Campus Talca, Chile.
- Centro de Estudios Avanzados en Zonas Áridas (CEAZA), Universidad Católica del Norte, Coquimbo, Chile.
- Centro de Investigaciones y Estudios Avanzados del Maule (CIEAM), Universidad Católica del Maule, Talca, Chile.
| | | | - Cristian Torres-Díaz
- Grupo de Biodiversidad y Cambio Global (BCG), Departamento de Ciencias Básicas, Universidad del Bío-Bío, Chillán, Chile
| | - Pedro E Gundel
- IFEVA, Universidad de Buenos Aires, CONICET, Facultad de Agronomía, Buenos Aires, Argentina
| | - Ingo Dreyer
- Centro de Bioinformática y Simulación Molecular (CBSM), Facultad de Ingeniería, Universidad de Talca, Campus Talca, Chile
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41
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Solis CA, Yong MT, Vinarao R, Jena K, Holford P, Shabala L, Zhou M, Shabala S, Chen ZH. Back to the Wild: On a Quest for Donors Toward Salinity Tolerant Rice. FRONTIERS IN PLANT SCIENCE 2020; 11:323. [PMID: 32265970 PMCID: PMC7098918 DOI: 10.3389/fpls.2020.00323] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2020] [Accepted: 03/05/2020] [Indexed: 05/20/2023]
Abstract
Salinity stress affects global food producing areas by limiting both crop growth and yield. Attempts to develop salinity-tolerant rice varieties have had limited success due to the complexity of the salinity tolerance trait, high variation in the stress response and a lack of available donors for candidate genes for cultivated rice. As a result, finding suitable donors of genes and traits for salinity tolerance has become a major bottleneck in breeding for salinity tolerant crops. Twenty-two wild Oryza relatives have been recognized as important genetic resources for quantitatively inherited traits such as resistance and/or tolerance to abiotic and biotic stresses. In this review, we discuss the challenges and opportunities of such an approach by critically analyzing evolutionary, ecological, genetic, and physiological aspects of Oryza species. We argue that the strategy of rice breeding for better Na+ exclusion employed for the last few decades has reached a plateau and cannot deliver any further improvement in salinity tolerance in this species. This calls for a paradigm shift in rice breeding and more efforts toward targeting mechanisms of the tissue tolerance and a better utilization of the potential of wild rice where such traits are already present. We summarize the differences in salinity stress adaptation amongst cultivated and wild Oryza relatives and identify several key traits that should be targeted in future breeding programs. This includes: (1) efficient sequestration of Na+ in mesophyll cell vacuoles, with a strong emphasis on control of tonoplast leak channels; (2) more efficient control of xylem ion loading; (3) efficient cytosolic K+ retention in both root and leaf mesophyll cells; and (4) incorporating Na+ sequestration in trichrome. We conclude that while amongst all wild relatives, O. rufipogon is arguably a best source of germplasm at the moment, genes and traits from the wild relatives, O. coarctata, O. latifolia, and O. alta, should be targeted in future genetic programs to develop salt tolerant cultivated rice.
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Affiliation(s)
- Celymar A. Solis
- School of Science, Western Sydney University, Penrith, NSW, Australia
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
| | - Miing T. Yong
- School of Science, Western Sydney University, Penrith, NSW, Australia
| | - Ricky Vinarao
- International Rice Research Institute, Metro Manila, Philippines
| | - Kshirod Jena
- International Rice Research Institute, Metro Manila, Philippines
| | - Paul Holford
- School of Science, Western Sydney University, Penrith, NSW, Australia
| | - Lana Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, China
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
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42
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Raddatz N, Morales de los Ríos L, Lindahl M, Quintero FJ, Pardo JM. Coordinated Transport of Nitrate, Potassium, and Sodium. FRONTIERS IN PLANT SCIENCE 2020; 11:247. [PMID: 32211003 PMCID: PMC7067972 DOI: 10.3389/fpls.2020.00247] [Citation(s) in RCA: 55] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Accepted: 02/18/2020] [Indexed: 05/19/2023]
Abstract
Potassium (K+) and nitrogen (N) are essential nutrients, and their absorption and distribution within the plant must be coordinated for optimal growth and development. Potassium is involved in charge balance of inorganic and organic anions and macromolecules, control of membrane electrical potential, pH homeostasis and the regulation of cell osmotic pressure, whereas nitrogen is an essential component of amino acids, proteins, and nucleic acids. Nitrate (NO3 -) is often the primary nitrogen source, but it also serves as a signaling molecule to the plant. Nitrate regulates root architecture, stimulates shoot growth, delays flowering, regulates abscisic acid-independent stomata opening, and relieves seed dormancy. Plants can sense K+/NO3 - levels in soils and adjust accordingly the uptake and root-to-shoot transport to balance the distribution of these ions between organs. On the other hand, in small amounts sodium (Na+) is categorized as a "beneficial element" for plants, mainly as a "cheap" osmolyte. However, at high concentrations in the soil, Na+ can inhibit various physiological processes impairing plant growth. Hence, plants have developed specific mechanisms to transport, sense, and respond to a variety of Na+ conditions. Sodium is taken up by many K+ transporters, and a large proportion of Na+ ions accumulated in shoots appear to be loaded into the xylem by systems that show nitrate dependence. Thus, an adequate supply of mineral nutrients is paramount to reduce the noxious effects of salts and to sustain crop productivity under salt stress. In this review, we will focus on recent research unraveling the mechanisms that coordinate the K+-NO3 -; Na+-NO3 -, and K+-Na+ transports, and the regulators controlling their uptake and allocation.
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Affiliation(s)
| | | | | | | | - José M. Pardo
- Institute of Plant Biochemistry and Photosynthesis, Consejo Superior de Investigaciones Científicas and Universidad de Sevilla, Seville, Spain
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43
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Wang Z, Hong Y, Zhu G, Li Y, Niu Q, Yao J, Hua K, Bai J, Zhu Y, Shi H, Huang S, Zhu JK. Loss of salt tolerance during tomato domestication conferred by variation in a Na + /K + transporter. EMBO J 2020; 39:e103256. [PMID: 32134151 DOI: 10.15252/embj.2019103256] [Citation(s) in RCA: 94] [Impact Index Per Article: 23.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2019] [Revised: 02/12/2020] [Accepted: 02/13/2020] [Indexed: 11/09/2022] Open
Abstract
Domestication has resulted in reduced salt tolerance in tomato. To identify the genetic components causing this deficiency, we performed a genome-wide association study (GWAS) for root Na+ /K+ ratio in a population consisting of 369 tomato accessions with large natural variations. The most significant variations associated with root Na+ /K+ ratio were identified within the gene SlHAK20 encoding a member of the clade IV HAK/KUP/KT transporters. We further found that SlHAK20 transports Na+ and K+ and regulates Na+ and K+ homeostasis under salt stress conditions. A variation in the coding sequence of SlHAK20 was found to be the causative variant associated with Na+ /K+ ratio and confer salt tolerance in tomato. Knockout mutations in tomato SlHAK20 and the rice homologous genes resulted in hypersensitivity to salt stress. Together, our study uncovered a previously unknown molecular mechanism of salt tolerance responsible for the deficiency in salt tolerance in cultivated tomato varieties. Our findings provide critical information for molecular breeding to improve salt tolerance in tomato and other crops.
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Affiliation(s)
- Zhen Wang
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China
| | - Yechun Hong
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.,University of Chinese Academy of Sciences, Shanghai, China
| | - Guangtao Zhu
- Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China.,The AGISCAAS-YNNU Joint Academy of Potato Sciences, Yunnan Normal University, Kunming, China
| | - Yumei Li
- The AGISCAAS-YNNU Joint Academy of Potato Sciences, Yunnan Normal University, Kunming, China
| | - Qingfeng Niu
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China
| | - Juanjuan Yao
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.,University of Chinese Academy of Sciences, Shanghai, China
| | - Kai Hua
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China
| | - Jinjuan Bai
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China
| | - Yingfang Zhu
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.,Collaborative Innovation Center of Crop Stress Biology, Institute of Plant Stress Biology, Henan University, Kaifeng, China
| | - Huazhong Shi
- Department of Chemistry and Biochemistry, Texas Tech University, Lubbock, TX, USA
| | - Sanwen Huang
- Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Jian-Kang Zhu
- Shanghai Center for Plant Stress Biology and Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, China.,Department of Horticulture and Landscape Architecture, Purdue University, West Lafayette, IN, USA
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44
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Munns R, Passioura JB, Colmer TD, Byrt CS. Osmotic adjustment and energy limitations to plant growth in saline soil. THE NEW PHYTOLOGIST 2020; 225:1091-1096. [PMID: 31006123 DOI: 10.1111/nph.15862] [Citation(s) in RCA: 123] [Impact Index Per Article: 30.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Accepted: 03/18/2019] [Indexed: 05/18/2023]
Abstract
Plant roots must exclude almost all of the Na+ and Cl- in saline soil while taking up water, otherwise these ions would build up to high concentrations in leaves. Plants evaporate c. 50 times more water than they retain, so 98% exclusion would result in shoot NaCl concentrations equal to that of the external medium. Taking up just 2% of the NaCl allows a plant to osmotically adjust the Na+ and Cl- in vacuoles, while organic solutes provide the balancing osmotic pressure in the cytoplasm. We quantify the costs of this exclusion by roots, the regulation of Na+ and Cl- transport through the plant, and the costs of osmotic adjustment with organic solutes in roots.
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Affiliation(s)
- Rana Munns
- ARC Centre of Excellence in Plant Energy Biology, and School of Agriculture and Environment, The University of Western Australia, Crawley, WA, 6009, Australia
- CSIRO Agriculture and Food, Canberra, ACT, 2601, Australia
| | | | - Timothy D Colmer
- ARC Industrial Transformation Research Hub on Legumes for Sustainable Agriculture, and School of Agriculture and Environment, Faculty of Science, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia
| | - Caitlin S Byrt
- ARC Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
- Research School of Biology, Australian National University, Canberra, ACT, 2600, Australia
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45
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Abstract
This article is a Commentary on https://doi.org/10.1111/nph.15955; https://doi.org/10.1111/nph.15713; https://doi.org/10.1111/nph.15773; https://doi.org/10.1111/nph.15864; https://doi.org/10.1111/nph.15862; https://doi.org/10.1111/nph.15852; https://doi.org/10.1111/nph.15758.
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Affiliation(s)
- Dale Sanders
- The John Innes CentreNorwich Research ParkNorwichNR4 7UHUK
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46
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Munns R, Day DA, Fricke W, Watt M, Arsova B, Barkla BJ, Bose J, Byrt CS, Chen ZH, Foster KJ, Gilliham M, Henderson SW, Jenkins CLD, Kronzucker HJ, Miklavcic SJ, Plett D, Roy SJ, Shabala S, Shelden MC, Soole KL, Taylor NL, Tester M, Wege S, Wegner LH, Tyerman SD. Energy costs of salt tolerance in crop plants. THE NEW PHYTOLOGIST 2020; 225:1072-1090. [PMID: 31004496 DOI: 10.1111/nph.15864] [Citation(s) in RCA: 177] [Impact Index Per Article: 44.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Accepted: 03/25/2019] [Indexed: 05/21/2023]
Abstract
Agriculture is expanding into regions that are affected by salinity. This review considers the energetic costs of salinity tolerance in crop plants and provides a framework for a quantitative assessment of costs. Different sources of energy, and modifications of root system architecture that would maximize water vs ion uptake are addressed. Energy requirements for transport of salt (NaCl) to leaf vacuoles for osmotic adjustment could be small if there are no substantial leaks back across plasma membrane and tonoplast in root and leaf. The coupling ratio of the H+ -ATPase also is a critical component. One proposed leak, that of Na+ influx across the plasma membrane through certain aquaporin channels, might be coupled to water flow, thus conserving energy. For the tonoplast, control of two types of cation channels is required for energy efficiency. Transporters controlling the Na+ and Cl- concentrations in mitochondria and chloroplasts are largely unknown and could be a major energy cost. The complexity of the system will require a sophisticated modelling approach to identify critical transporters, apoplastic barriers and root structures. This modelling approach will inform experimentation and allow a quantitative assessment of the energy costs of NaCl tolerance to guide breeding and engineering of molecular components.
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Affiliation(s)
- Rana Munns
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, and School of Agriculture and Environment, The University of Western Australia, Crawley, WA, 6009, Australia
- CSIRO Agriculture and Food, Canberra, ACT, 2601, Australia
| | - David A Day
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide, South Australia, 5001, Australia
| | - Wieland Fricke
- School of Biology and Environmental Sciences, University College Dublin (UCD), Dublin, 4, Ireland
| | - Michelle Watt
- Plant Sciences, Institute of Bio and Geosciences, Forschungszentrum Juelich, Helmholtz Association, 52425, Juelich, Germany
| | - Borjana Arsova
- Plant Sciences, Institute of Bio and Geosciences, Forschungszentrum Juelich, Helmholtz Association, 52425, Juelich, Germany
| | - Bronwyn J Barkla
- Southern Cross Plant Science, Southern Cross University, Lismore, NSW, 2481, Australia
| | - Jayakumar Bose
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Caitlin S Byrt
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
- Research School of Biology, Australian National University, Canberra, ACT, 2600, Australia
| | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW, 2751, Australia
| | - Kylie J Foster
- Phenomics and Bioinformatics Research Centre, School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, SA, 5095, Australia
| | - Matthew Gilliham
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Sam W Henderson
- Commonwealth Scientific and Industrial Research Organisation, Agriculture and Food, Urrbrae, SA, 5064, Australia
| | - Colin L D Jenkins
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide, South Australia, 5001, Australia
| | - Herbert J Kronzucker
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, VIC, 3010, Australia
| | - Stanley J Miklavcic
- Phenomics and Bioinformatics Research Centre, School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, SA, 5095, Australia
| | - Darren Plett
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, VIC, 3010, Australia
| | - Stuart J Roy
- Australian Research Council (ARC) Industrial Transformation Research Hub for Wheat in a Hot and Dry Climate, School of Agriculture, Food and Wine, University of Adelaide, Urrbrae, SA, 5064, Australia
| | - Sergey Shabala
- Tasmanian Institute for Agriculture, University of Tasmania, Private Bag 54, Hobart, Tas., 7001, Australia
- International Centre for Environmental Membrane Biology, Foshan University, Foshan, 528000, China
| | - Megan C Shelden
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Kathleen L Soole
- College of Science and Engineering, Flinders University, GPO Box 2100, Adelaide, South Australia, 5001, Australia
| | - Nicolas L Taylor
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Molecular Sciences and Institute of Agriculture, The University of Western Australia, Crawley, WA, 6009, Australia
| | - Mark Tester
- Biological and Environmental Sciences & Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia
| | - Stefanie Wege
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
| | - Lars H Wegner
- Karlsruhe Institute of Technology, Institute for Pulsed Power and Microwave Technology (IHM), D-76344, Eggenstein-Leopoldshafen, Germany
| | - Stephen D Tyerman
- Australian Research Council (ARC) Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, 5064, Australia
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47
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Hu B, Deng F, Chen G, Chen X, Gao W, Long L, Xia J, Chen ZH. Evolution of Abscisic Acid Signaling for Stress Responses to Toxic Metals and Metalloids. FRONTIERS IN PLANT SCIENCE 2020; 11:909. [PMID: 32765540 PMCID: PMC7379394 DOI: 10.3389/fpls.2020.00909] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2020] [Accepted: 06/03/2020] [Indexed: 05/02/2023]
Abstract
Toxic heavy metals and metalloids in agricultural ecosystems are crucial factors that limit global crop productivity and food safety. Industrial toxic heavy metals and metalloids such as cadmium, lead, and arsenic have contaminated large areas of arable land in the world and their accumulation in the edible parts of crops is causing serious health risks to humans and animals. Plants have co-evolved with various concentrations of these toxic metals and metalloids in soil and water. Some green plant species have significant innovations in key genes for the adaptation of abiotic stress tolerance pathways that are able to tolerate heavy metals and metalloids. Increasing evidence has demonstrated that phytohormone abscisic acid (ABA) plays a vital role in the alleviation of heavy metal and metalloid stresses in plants. Here, we trace the evolutionary origins of the key gene families connecting ABA signaling with tolerance to heavy metals and metalloids in green plants. We also summarize the molecular and physiological aspects of ABA in the uptake, root-to-shoot translocation, chelation, sequestration, reutilization, and accumulation of key heavy metals and metalloids in plants. The molecular evolution and interaction between the ABA signaling pathway and mechanisms for heavy metal and metalloid tolerance are highlighted in this review. Therefore, we propose that it is promising to manipulate ABA signaling in plant tissues to reduce the uptake and accumulation of toxic heavy metals and metalloids in crops through the application of ABA-producing bacteria or ABA analogues. This may lead to improvements in tolerance of major crops to heavy metals and metalloids.
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Affiliation(s)
- Beibei Hu
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, China
| | - Fenglin Deng
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, China
- *Correspondence: Fenglin Deng, ; Zhong-Hua Chen,
| | - Guang Chen
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, China
| | - Xuan Chen
- Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, China
| | - Wei Gao
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan University, Kaifeng, China
| | - Lu Long
- State Key Laboratory of Crop Stress Adaptation and Improvement, Henan University, Kaifeng, China
| | - Jixing Xia
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Life Science and Technology, Guangxi University, Nanning, China
| | - Zhong-Hua Chen
- School of Science, Western Sydney University, Penrith, NSW, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
- *Correspondence: Fenglin Deng, ; Zhong-Hua Chen,
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48
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Wegner LH, Shabala S. Biochemical pH clamp: the forgotten resource in membrane bioenergetics. THE NEW PHYTOLOGIST 2020; 225:37-47. [PMID: 31393010 DOI: 10.1111/nph.16094] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2019] [Accepted: 08/01/2019] [Indexed: 05/08/2023]
Abstract
Solute uptake and release by plant cells are frequently energized by coupling to H+ influx supported by the proton motive force (pmf). The pmf results from a stable pH difference between the apoplast and the cytosol, with bulk values ranging from 4.9 to 5.8 and from 7.1 to 7.5, respectively, in combination with a negative electrical membrane potential. The P-type H+ ATPases pumping H+ from the cytosol into the apoplast at the expense of ATP hydrolysis are generally viewed as the only pmf source, exclusively linking membrane transport to energy metabolism. However, recent evidence suggests that pump activity may be insufficient to energize transport, particularly under stress conditions. Indeed, cytosolic H+ scavenging and apoplastic H+ generation by metabolism (denoted as 'active' buffering in contrast to the readily exhausted 'passive' matrix buffering) also stabilize the pH gradient. In the cytosol, H+ scavenging is mainly associated with malate decarboxylation catalyzed by malic enzyme, and via the GABA shunt of the tricarboxylic acid (TCA) cycle involving glutamate decarboxylation. In the apoplast, formation of bicarbonate from CO2 , the end-product of respiration, generates H+ at pH ≥ 6. Membrane potential is stabilized by K+ release and/or by anion uptake via ion channels. Finally, thermodynamic aspects of active buffering are discussed.
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Affiliation(s)
- Lars H Wegner
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528041, China
| | - Sergey Shabala
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan, 528041, China
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49
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Wu H, Shabala L, Zhou M, Su N, Wu Q, Ul-Haq T, Zhu J, Mancuso S, Azzarello E, Shabala S. Root vacuolar Na + sequestration but not exclusion from uptake correlates with barley salt tolerance. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2019; 100:55-67. [PMID: 31148333 DOI: 10.1111/tpj.14424] [Citation(s) in RCA: 49] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2019] [Revised: 05/16/2019] [Accepted: 05/21/2019] [Indexed: 05/24/2023]
Abstract
Soil salinity is a major constraint for the global agricultural production. For many decades, Na+ exclusion from uptake has been the key trait targeted in breeding programs; yet, no major breakthrough in creating salt-tolerant germplasm was achieved. In this work, we have combined the microelectrode ion flux estimation (MIFE) technique for non-invasive ion flux measurements with confocal fluorescence dye imaging technique to screen 45 accessions of barley to reveal the relative contribution of Na+ exclusion from the cytosol to the apoplast and its vacuolar sequestration in the root apex, for the overall salinity stress tolerance. We show that Na+ /H+ antiporter-mediated Na+ extrusion from the root plays a minor role in the overall salt tolerance in barley. At the same time, a strong and positive correlation was found between root vacuolar Na+ sequestration ability and the overall salt tolerance. The inability of salt-sensitive genotypes to sequester Na+ in root vacuoles was in contrast to significantly higher expression levels of both HvNHX1 tonoplast Na+ /H+ antiporters and HvVP1 H+ -pumps compared with tolerant genotypes. These data are interpreted as a failure of sensitive varieties to prevent Na+ back-leak into the cytosol and existence of a futile Na+ cycle at the tonoplast. Taken together, our results demonstrated that root vacuolar Na+ sequestration but not exclusion from uptake played the main role in barley salinity tolerance, and suggested that the focus of the breeding programs should be shifted from targeting genes mediating Na+ exclusion from uptake by roots to more efficient root vacuolar Na+ sequestration.
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Affiliation(s)
- Honghong Wu
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
- College of Plant Science & Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Lana Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
| | - Meixue Zhou
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
| | - Nana Su
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
| | - Qi Wu
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
| | - Tanveer Ul-Haq
- Department of Soil and Environmental Sciences, MNS University of Agriculture, Multan, 60000, Pakistan
| | - Juan Zhu
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
| | - Stefano Mancuso
- Department of Horticulture, University of Florence, 50019, Sesto Fiorentino, Italy
| | - Elisa Azzarello
- Department of Horticulture, University of Florence, 50019, Sesto Fiorentino, Italy
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Private Bag 54, Hobart, Tasmania, 7001, Australia
- International Centre for Environmental Membrane Biology, Foshan University, Foshan, China
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50
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Bai X, Dai L, Sun H, Chen M, Sun Y. Effects of moderate soil salinity on osmotic adjustment and energy strategy in soybean under drought stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 139:307-313. [PMID: 30927693 DOI: 10.1016/j.plaphy.2019.03.029] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Revised: 03/11/2019] [Accepted: 03/18/2019] [Indexed: 06/09/2023]
Abstract
Under drought and soil salinity, plants usually respond to accumulate inorganic and organic osmolytes for adaptation, that would induce changes in energy consumption strategy of plants. Moderate soil salinity would enable plants to lower energy consumption for osmotic adjustment by passively absorbing more Na+. This action would keep more energies for growth of drought-stressed plants. Thus, Na+ accumulation might be an energy-efficient strategy for plants to cope with drought was speculated. To support this speculation, we assessed the effects of soil salinity on osmotic adjustment and energy utilization under drought in this study. Our results indicated that the ratio and content of inorganic osmolytes was significantly higher under drought-saline stress (D + S) than those under single drought stress (D), while the osmolarity and contents of organic osmolytes of D + S were significantly lower than those of D. This indicated that moderate soil salinity could enable soybean seedlings to consume relatively lower energies to produce less organic osmolytes and accumulate more inorganic ions for osmotic adjustment coping with drought. Meanwhile the water content, cell turgor, ash content, and specific leaf area and biomass of D + S were significantly higher than those of D, but the leaf construction cost of D + S was significantly lower than those of D. This suggested that moderate soil salinity could enhance water retention, and reduce the photoassimilate and energy consumption of droughty soybean seedlings. This work would help to understand the positive effects of moderate soil salinity on plant growth on the level of osmotic adjustment and energy consumption strategy.
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Affiliation(s)
- Xinfu Bai
- School of Life Sciences, Ludong University, Yantai, Shandong, 264025, China
| | - Liqiang Dai
- School of Life Sciences, Ludong University, Yantai, Shandong, 264025, China
| | - Hongmin Sun
- School of Life Sciences, Ludong University, Yantai, Shandong, 264025, China
| | - Minting Chen
- School of Life Sciences, Ludong University, Yantai, Shandong, 264025, China
| | - Yanlin Sun
- School of Life Sciences, Ludong University, Yantai, Shandong, 264025, China.
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