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For: Ratzke C, Gore J. Modifying and reacting to the environmental pH can drive bacterial interactions. PLoS Biol 2018. [PMID: 29538378 PMCID: PMC5868856 DOI: 10.1371/journal.pbio.2004248] [Citation(s) in RCA: 185] [Impact Index Per Article: 30.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]  Open
Number Cited by Other Article(s)
1
Kozawa T, Aoyagi H. Novel method for screening probiotic candidates tolerant to human gastrointestinal stress. J Microbiol Methods 2024;222:106945. [PMID: 38729266 DOI: 10.1016/j.mimet.2024.106945] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2024] [Revised: 05/06/2024] [Accepted: 05/07/2024] [Indexed: 05/12/2024]
2
Zhu Y, Ma S, Wen Y, Zhao W, Jiang Y, Li M, Zou K. Deciphering assembly processes, network complexity and stability of potential pathogenic communities in two anthropogenic coastal regions of a highly urbanized estuary. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024:124444. [PMID: 38936795 DOI: 10.1016/j.envpol.2024.124444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Revised: 06/01/2024] [Accepted: 06/24/2024] [Indexed: 06/29/2024]
3
Abbasi E, Akçay E. Host control and species interactions jointly determine microbiome community structure. Theor Popul Biol 2024:S0040-5809(24)00066-2. [PMID: 38925487 DOI: 10.1016/j.tpb.2024.06.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2023] [Revised: 03/21/2024] [Accepted: 06/19/2024] [Indexed: 06/28/2024]
4
Raba G, Luis AS, Schneider H, Morell I, Jin C, Adamberg S, Hansson GC, Adamberg K, Arike L. Metaproteomics reveals parallel utilization of colonic mucin glycans and dietary fibers by the human gut microbiota. iScience 2024;27:110093. [PMID: 38947523 PMCID: PMC11214529 DOI: 10.1016/j.isci.2024.110093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 02/29/2024] [Accepted: 05/21/2024] [Indexed: 07/02/2024]  Open
5
Diaz-Colunga J, Skwara A, Vila JCC, Bajic D, Sanchez A. Global epistasis and the emergence of function in microbial consortia. Cell 2024;187:3108-3119.e30. [PMID: 38776921 DOI: 10.1016/j.cell.2024.04.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Revised: 12/06/2023] [Accepted: 04/16/2024] [Indexed: 05/25/2024]
6
Lopes W, Amor DR, Gore J. Cooperative growth in microbial communities is a driver of multistability. Nat Commun 2024;15:4709. [PMID: 38830891 PMCID: PMC11148146 DOI: 10.1038/s41467-024-48521-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Accepted: 05/03/2024] [Indexed: 06/05/2024]  Open
7
Sadiq FA, De Reu K, Yang N, Burmølle M, Heyndrickx M. Interspecies interactions in dairy biofilms drive community structure and response against cleaning and disinfection. Biofilm 2024;7:100195. [PMID: 38639000 PMCID: PMC11024912 DOI: 10.1016/j.bioflm.2024.100195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Revised: 03/13/2024] [Accepted: 03/28/2024] [Indexed: 04/20/2024]  Open
8
Lee KK, Liu S, Crocker K, Huggins DR, Tikhonov M, Mani M, Kuehn S. Functional regimes define the response of the soil microbiome to environmental change. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.15.584851. [PMID: 38559185 PMCID: PMC10980070 DOI: 10.1101/2024.03.15.584851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
9
Phyu K, Zhi S, Liang J, Chang CC, Liu J, Cao Y, Wang H, Zhang K. Microalgal-bacterial consortia for the treatment of livestock wastewater: Removal of pollutants, interaction mechanisms, influencing factors, and prospects for application. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024;349:123864. [PMID: 38554837 DOI: 10.1016/j.envpol.2024.123864] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Revised: 03/06/2024] [Accepted: 03/23/2024] [Indexed: 04/02/2024]
10
Yang H, Li Q. Modifying humus-phosphorus-arsenic interactions in sludge composting: The strengthening of phosphorus availability and arsenic efflux detoxification mechanisms. JOURNAL OF HAZARDOUS MATERIALS 2024;470:134131. [PMID: 38552390 DOI: 10.1016/j.jhazmat.2024.134131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Revised: 03/06/2024] [Accepted: 03/24/2024] [Indexed: 04/25/2024]
11
Choudhary R, Mahadevan R. DyMMM-LEAPS: An ML-based framework for modulating evenness and stability in synthetic microbial communities. Biophys J 2024:S0006-3495(24)00320-5. [PMID: 38733081 DOI: 10.1016/j.bpj.2024.05.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2024] [Revised: 04/22/2024] [Accepted: 05/07/2024] [Indexed: 05/13/2024]  Open
12
Rawat M, Chauhan M, Pandey A. Extremophiles and their expanding biotechnological applications. Arch Microbiol 2024;206:247. [PMID: 38713374 DOI: 10.1007/s00203-024-03981-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 04/16/2024] [Accepted: 04/25/2024] [Indexed: 05/08/2024]
13
Hossain S, Shukri ZNA, Waiho K, Ibrahim YS, Kamaruzzan AS, Rahim AIA, Draman AS, Wahab W, Khatoon H, Kasan NA. Biodegradation of polyethylene (PE), polypropylene (PP), and polystyrene (PS) microplastics by floc-forming bacteria, Bacillus cereus strain SHBF2, isolated from a commercial aquafarm. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024;31:32225-32245. [PMID: 38644425 DOI: 10.1007/s11356-024-33337-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Accepted: 04/11/2024] [Indexed: 04/23/2024]
14
Liu Y, Cheng YY, Thompson J, Zhou Z, Vivas EI, Warren MF, Rey FE, Anantharaman K, Venturelli OS. Shaping human gut community assembly and butyrate production by controlling the arginine dihydrolase pathway. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.01.10.523442. [PMID: 37986770 PMCID: PMC10659395 DOI: 10.1101/2023.01.10.523442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2023]
15
Ho PY, Nguyen TH, Sanchez JM, DeFelice BC, Huang KC. Resource competition predicts assembly of gut bacterial communities in vitro. Nat Microbiol 2024;9:1036-1048. [PMID: 38486074 DOI: 10.1038/s41564-024-01625-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2023] [Accepted: 01/26/2024] [Indexed: 04/06/2024]
16
Hassani MA, Cui Z, LaReau J, Huntley RB, Steven B, Zeng Q. Inter-species interactions between two bacterial flower commensals and a floral pathogen reduce disease incidence and alter pathogen activity. mBio 2024;15:e0021324. [PMID: 38376185 PMCID: PMC10936193 DOI: 10.1128/mbio.00213-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Accepted: 01/30/2024] [Indexed: 02/21/2024]  Open
17
Cui W, Marsland R, Mehta P. Les Houches Lectures on Community Ecology: From Niche Theory to Statistical Mechanics. ARXIV 2024:arXiv:2403.05497v1. [PMID: 38495557 PMCID: PMC10942479] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
18
Worthan SB, McCarthy RDP, Delaleau M, Stikeleather R, Bratton BP, Boudvillain M, Behringer MG. Evolution of pH-sensitive transcription termination during adaptation to repeated long-term starvation. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.01.582989. [PMID: 38464051 PMCID: PMC10925284 DOI: 10.1101/2024.03.01.582989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
19
Yu F, Nair AA, Lauper U, Luo G, Herb J, Morse M, Savage B, Zartarian M, Wang M, Lin S. Mysteriously rapid rise in Legionnaires' disease incidence correlates with declining atmospheric sulfur dioxide. PNAS NEXUS 2024;3:pgae085. [PMID: 38476666 PMCID: PMC10929586 DOI: 10.1093/pnasnexus/pgae085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Accepted: 02/09/2024] [Indexed: 03/14/2024]
20
Di Martino R, Picot A, Mitri S. Oxidative stress changes interactions between 2 bacterial species from competitive to facilitative. PLoS Biol 2024;22:e3002482. [PMID: 38315734 PMCID: PMC10881020 DOI: 10.1371/journal.pbio.3002482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 02/21/2024] [Accepted: 12/22/2023] [Indexed: 02/07/2024]  Open
21
Maull V, Pla Mauri J, Conde Pueyo N, Solé R. A synthetic microbial Daisyworld: planetary regulation in the test tube. J R Soc Interface 2024;21:20230585. [PMID: 38321922 PMCID: PMC10847846 DOI: 10.1098/rsif.2023.0585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2023] [Accepted: 01/12/2024] [Indexed: 02/08/2024]  Open
22
Owojori GO, Lateef SA, Ana GREE. Effectiveness of wastewater treatment plant at the removal of nutrients, pathogenic bacteria, and antibiotic-resistant bacteria in wastewater from hospital source. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024;31:10785-10801. [PMID: 38212560 DOI: 10.1007/s11356-024-31829-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Accepted: 12/29/2023] [Indexed: 01/13/2024]
23
Voogdt CGP, Tripathi S, Bassler SO, McKeithen-Mead SA, Guiberson ER, Koumoutsi A, Bravo AM, Buie C, Zimmermann M, Sonnenburg JL, Typas A, Deutschbauer AM, Shiver AL, Huang KC. Randomly barcoded transposon mutant libraries for gut commensals II: Applying libraries for functional genetics. Cell Rep 2024;43:113519. [PMID: 38142398 DOI: 10.1016/j.celrep.2023.113519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 10/22/2023] [Accepted: 11/14/2023] [Indexed: 12/26/2023]  Open
24
Narla AV, Hwa T, Murugan A. Dynamic coexistence driven by physiological transitions in microbial communities. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.10.575059. [PMID: 38260536 PMCID: PMC10802591 DOI: 10.1101/2024.01.10.575059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
25
Narla AV, Hwa T, Murugan A. Dynamic coexistence driven by physiological transitions in microbial communities. ARXIV 2024:arXiv:2401.02556v1. [PMID: 38259349 PMCID: PMC10802671] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/24/2024]
26
Bartsch M, Hahn A, Berkemeyer S. Bridging the Gap from Enterotypes to Personalized Dietary Recommendations: A Metabolomics Perspective on Microbiome Research. Metabolites 2023;13:1182. [PMID: 38132864 PMCID: PMC10744656 DOI: 10.3390/metabo13121182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 11/28/2023] [Accepted: 11/30/2023] [Indexed: 12/23/2023]  Open
27
Liu X, Liu Q, Sheng Y. Nutrients in overlying water affect the environmental behavior of heavy metals in coastal sediments. ENVIRONMENTAL RESEARCH 2023;238:117135. [PMID: 37714367 DOI: 10.1016/j.envres.2023.117135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2023] [Revised: 07/18/2023] [Accepted: 09/12/2023] [Indexed: 09/17/2023]
28
Rashad YM, Hafez M, Rashad M. Diazotrophic Azotobacter salinestris YRNF3: a probable calcite-solubilizing bio-agent for improving the calcareous soil properties. Sci Rep 2023;13:20621. [PMID: 37996572 PMCID: PMC10667278 DOI: 10.1038/s41598-023-47924-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2023] [Accepted: 11/20/2023] [Indexed: 11/25/2023]  Open
29
Sadiq FA, De Reu K, Steenackers H, Van de Walle A, Burmølle M, Heyndrickx M. Dynamic social interactions and keystone species shape the diversity and stability of mixed-species biofilms - an example from dairy isolates. ISME COMMUNICATIONS 2023;3:118. [PMID: 37968339 PMCID: PMC10651889 DOI: 10.1038/s43705-023-00328-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2023] [Revised: 10/28/2023] [Accepted: 11/02/2023] [Indexed: 11/17/2023]
30
Liu B, Garza DR, Gonze D, Krzynowek A, Simoens K, Bernaerts K, Geirnaert A, Faust K. Starvation responses impact interaction dynamics of human gut bacteria Bacteroides thetaiotaomicron and Roseburia intestinalis. THE ISME JOURNAL 2023;17:1940-1952. [PMID: 37670028 PMCID: PMC10579405 DOI: 10.1038/s41396-023-01501-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Revised: 08/21/2023] [Accepted: 08/23/2023] [Indexed: 09/07/2023]
31
Wang P, Zuo W, Zhu W, Wang S, Li B, Jiang Y, Wang G, Tian Y, Zhang Y. Deciphering the interaction of heavy metals with Geobacter-induced vivianite recovery from wastewater. WATER RESEARCH 2023;245:120621. [PMID: 37717332 DOI: 10.1016/j.watres.2023.120621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Revised: 08/05/2023] [Accepted: 09/10/2023] [Indexed: 09/19/2023]
32
Prigent I, Mullon C. The molding of intraspecific trait variation by selection under ecological inheritance. Evolution 2023;77:2144-2161. [PMID: 37459126 DOI: 10.1093/evolut/qpad124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 05/04/2023] [Accepted: 05/29/2023] [Indexed: 10/05/2023]
33
Huang Y, Sheth RU, Zhao S, Cohen LA, Dabaghi K, Moody T, Sun Y, Ricaurte D, Richardson M, Velez-Cortes F, Blazejewski T, Kaufman A, Ronda C, Wang HH. High-throughput microbial culturomics using automation and machine learning. Nat Biotechnol 2023;41:1424-1433. [PMID: 36805559 PMCID: PMC10567565 DOI: 10.1038/s41587-023-01674-2] [Citation(s) in RCA: 32] [Impact Index Per Article: 32.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Accepted: 01/11/2023] [Indexed: 02/22/2023]
34
Lin Z, Zheng X, Chen J. Deciphering pH-dependent microbial taxa and functional gene co-occurrence in the coral Galaxea fascicularis. MICROBIAL ECOLOGY 2023;86:1856-1868. [PMID: 36719456 DOI: 10.1007/s00248-023-02183-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Accepted: 01/20/2023] [Indexed: 06/18/2023]
35
Schumacher K, Brameyer S, Jung K. Bacterial acid stress response: from cellular changes to antibiotic tolerance and phenotypic heterogeneity. Curr Opin Microbiol 2023;75:102367. [PMID: 37633223 DOI: 10.1016/j.mib.2023.102367] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 07/21/2023] [Accepted: 07/24/2023] [Indexed: 08/28/2023]
36
Miller ZR, Allesina S. Habitat Heterogeneity, Environmental Feedbacks, and Species Coexistence across Timescales. Am Nat 2023;202:E53-E64. [PMID: 37531282 DOI: 10.1086/724821] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/04/2023]
37
Palmer BJ, Almgren AS, Johnson CGM, Myers AT, Cannon WR. BMX: Biological modelling and interface exchange. Sci Rep 2023;13:12235. [PMID: 37507417 PMCID: PMC10382537 DOI: 10.1038/s41598-023-39150-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 07/20/2023] [Indexed: 07/30/2023]  Open
38
Fiegna F, Pande S, Peitz H, Velicer GJ. Widespread density dependence of bacterial growth under acid stress. iScience 2023;26:106952. [PMID: 37332671 PMCID: PMC10275722 DOI: 10.1016/j.isci.2023.106952] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 01/27/2023] [Accepted: 05/22/2023] [Indexed: 06/20/2023]  Open
39
Dubey M, Vellanki BP, Kazmi AA. Fate of emerging contaminants in a sequencing batch reactor and potential of biological activated carbon as tertiary treatment for the removal of persisting contaminants. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023;338:117802. [PMID: 36996569 DOI: 10.1016/j.jenvman.2023.117802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Revised: 03/22/2023] [Accepted: 03/22/2023] [Indexed: 06/19/2023]
40
Domański J, Janczura A, Wanat M, Wiglusz K, Grajzer M, Simmons JE, Domagała Z, Szepietowski JC. Preservation fluids of heritage anatomical specimens - a challenge for modern science. Studies of the origin, composition and microbiological contamination of old museum collections. J Anat 2023;243:148-166. [PMID: 37024147 PMCID: PMC10273345 DOI: 10.1111/joa.13854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 02/02/2023] [Accepted: 02/15/2023] [Indexed: 04/08/2023]  Open
41
Mougi A. Eco-evolutionary dynamics in microbial interactions. Sci Rep 2023;13:9042. [PMID: 37270654 DOI: 10.1038/s41598-023-36221-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 05/31/2023] [Indexed: 06/05/2023]  Open
42
Huang C, Guo Z, Peng C, Anaman R, Zhang P. Immobilization of Cd in the soil of mining areas by FeMn oxidizing bacteria. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023;873:162306. [PMID: 36801403 DOI: 10.1016/j.scitotenv.2023.162306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 01/13/2023] [Accepted: 02/13/2023] [Indexed: 06/18/2023]
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Jo C, Bernstein DB, Vaisman N, Frydman HM, Segrè D. Construction and Modeling of a Coculture Microplate for Real-Time Measurement of Microbial Interactions. mSystems 2023;8:e0001721. [PMID: 36802169 PMCID: PMC10134821 DOI: 10.1128/msystems.00017-21] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2021] [Accepted: 01/24/2023] [Indexed: 02/23/2023]  Open
44
Limberger R, Daugaard U, Gupta A, Krug RM, Lemmen KD, van Moorsel SJ, Suleiman M, Zuppinger-Dingley D, Petchey OL. Functional diversity can facilitate the collapse of an undesirable ecosystem state. Ecol Lett 2023;26:883-895. [PMID: 37059694 DOI: 10.1111/ele.14217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Revised: 02/01/2023] [Accepted: 03/13/2023] [Indexed: 04/16/2023]
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Deforet M. Long-range alteration of the physical environment mediates cooperation between Pseudomonas aeruginosa swarming colonies. Environ Microbiol 2023. [PMID: 36964975 DOI: 10.1111/1462-2920.16373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Accepted: 03/15/2023] [Indexed: 03/27/2023]
46
Ji X, Yu X, Zhang L, Wu Q, Chen F, Guo F, Xu Y. Acidity drives volatile metabolites in the spontaneous fermentation of sesame flavor-type baijiu. Int J Food Microbiol 2023;389:110101. [PMID: 36724601 DOI: 10.1016/j.ijfoodmicro.2023.110101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2022] [Revised: 12/29/2022] [Accepted: 01/15/2023] [Indexed: 01/26/2023]
47
Manyi-Loh CE, Okoh AI, Lues R. Occurrence and Multidrug Resistance in Strains of Listeria monocytogenes Recovered from the Anaerobic Co-Digestion Sludge Contained in a Single Stage Steel Biodigester: Implications for Antimicrobial Stewardship. Microorganisms 2023;11:microorganisms11030725. [PMID: 36985298 PMCID: PMC10056191 DOI: 10.3390/microorganisms11030725] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 03/06/2023] [Accepted: 03/09/2023] [Indexed: 03/16/2023]  Open
48
Kapinusova G, Lopez Marin MA, Uhlik O. Reaching unreachables: Obstacles and successes of microbial cultivation and their reasons. Front Microbiol 2023;14:1089630. [PMID: 36960281 PMCID: PMC10027941 DOI: 10.3389/fmicb.2023.1089630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 02/10/2023] [Indexed: 03/09/2023]  Open
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Arnoulx de Pirey T, Bunin G. Aging by Near-Extinctions in Many-Variable Interacting Populations. PHYSICAL REVIEW LETTERS 2023;130:098401. [PMID: 36930904 DOI: 10.1103/physrevlett.130.098401] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Accepted: 01/13/2023] [Indexed: 06/18/2023]
50
Nor FHM, Abdullah S, Ibrahim Z, Nor MHM, Osman MI, Al Farraj DA, AbdelGawwad MR, Kamyab H. Role of extremophilic Bacillus cereus KH1 and its lipopeptide in treatment of organic pollutant in wastewater. Bioprocess Biosyst Eng 2023;46:381-391. [PMID: 35779113 DOI: 10.1007/s00449-022-02749-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Accepted: 06/13/2022] [Indexed: 12/01/2022]
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