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Mehrotra D, Levenstein D, Duszkiewicz AJ, Carrasco SS, Booker SA, Kwiatkowska A, Peyrache A. Hyperpolarization-activated currents drive neuronal activation sequences in sleep. Curr Biol 2024; 34:3043-3054.e8. [PMID: 38901427 DOI: 10.1016/j.cub.2024.05.048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2023] [Revised: 04/03/2024] [Accepted: 05/23/2024] [Indexed: 06/22/2024]
Abstract
Sequential neuronal patterns are believed to support information processing in the cortex, yet their origin is still a matter of debate. We report that neuronal activity in the mouse postsubiculum (PoSub), where a majority of neurons are modulated by the animal's head direction, was sequentially activated along the dorsoventral axis during sleep at the transition from hyperpolarized "DOWN" to activated "UP" states, while representing a stable direction. Computational modeling suggested that these dynamics could be attributed to a spatial gradient of hyperpolarization-activated currents (Ih), which we confirmed in ex vivo slice experiments and corroborated in other cortical structures. These findings open up the possibility that varying amounts of Ih across cortical neurons could result in sequential neuronal patterns and that traveling activity upstream of the entorhinal-hippocampal circuit organizes large-scale neuronal activity supporting learning and memory during sleep.
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Affiliation(s)
- Dhruv Mehrotra
- Montréal Neurological Institute and Hospital, Department of Neurology and Neurosurgery, 3801 Rue University, Montréal, QC H3A 2B4, Canada; Integrated Program in Neuroscience, McGill University, 3801 Rue University, Montréal, QC H3A 2B4, Canada
| | - Daniel Levenstein
- Montréal Neurological Institute and Hospital, Department of Neurology and Neurosurgery, 3801 Rue University, Montréal, QC H3A 2B4, Canada; MILA, 6666 Rue Saint-Urbain, Montréal, QC H2S 3H1, Canada
| | - Adrian J Duszkiewicz
- Montréal Neurological Institute and Hospital, Department of Neurology and Neurosurgery, 3801 Rue University, Montréal, QC H3A 2B4, Canada; Division of Psychology, Faculty of Natural Sciences, University of Stirling, Stirling FK9 4LA, UK; Centre for Discovery Brain Sciences, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK
| | - Sofia Skromne Carrasco
- Montréal Neurological Institute and Hospital, Department of Neurology and Neurosurgery, 3801 Rue University, Montréal, QC H3A 2B4, Canada; Integrated Program in Neuroscience, McGill University, 3801 Rue University, Montréal, QC H3A 2B4, Canada
| | - Sam A Booker
- Centre for Discovery Brain Sciences, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK; Simons Initiative for the Developing Brain, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK; Patrick Wild Centre for Research into Autism, Fragile X Syndrome & Intellectual Disabilities, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK
| | - Angelika Kwiatkowska
- Centre for Discovery Brain Sciences, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK; Simons Initiative for the Developing Brain, University of Edinburgh, Hugh Robson Building, George Square, Edinburgh EH8 9XD, UK
| | - Adrien Peyrache
- Montréal Neurological Institute and Hospital, Department of Neurology and Neurosurgery, 3801 Rue University, Montréal, QC H3A 2B4, Canada.
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2
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Northoff G, Zilio F, Zhang J. Beyond task response-Pre-stimulus activity modulates contents of consciousness. Phys Life Rev 2024; 49:19-37. [PMID: 38492473 DOI: 10.1016/j.plrev.2024.03.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2024] [Accepted: 03/03/2024] [Indexed: 03/18/2024]
Abstract
The current discussion on the neural correlates of the contents of consciousness (NCCc) focuses mainly on the post-stimulus period of task-related activity. This neglects the substantial impact of the spontaneous or ongoing activity of the brain as manifest in pre-stimulus activity. Does the interaction of pre- and post-stimulus activity shape the contents of consciousness? Addressing this gap in our knowledge, we review and converge two recent lines of findings, that is, pre-stimulus alpha power and pre- and post-stimulus alpha trial-to-trial variability (TTV). The data show that pre-stimulus alpha power modulates post-stimulus activity including specifically the subjective features of conscious contents like confidence and vividness. At the same time, alpha pre-stimulus variability shapes post-stimulus TTV reduction including the associated contents of consciousness. We propose that non-additive rather than merely additive interaction of the internal pre-stimulus activity with the external stimulus in the alpha band is key for contents to become conscious. This is mediated by mechanisms on different levels including neurophysiological, neurocomputational, neurodynamic, neuropsychological and neurophenomenal levels. Overall, considering the interplay of pre-stimulus intrinsic and post-stimulus extrinsic activity across wider timescales, not just evoked responses in the post-stimulus period, is critical for identifying neural correlates of consciousness. This is well in line with both processing and especially the Temporo-spatial theory of consciousness (TTC).
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Affiliation(s)
- Georg Northoff
- University of Ottawa, Institute of Mental Health Research at the Royal Ottawa Hospital, Ottawa, Canada.
| | - Federico Zilio
- Department of Philosophy, Sociology, Education and Applied Psychology, University of Padua, Padua, Italy
| | - Jianfeng Zhang
- Center for Brain Disorders and Cognitive Sciences, School of Psychology, Shenzhen University, Shenzhen, China.
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3
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Panagiotaropoulos TI. An integrative view of the role of prefrontal cortex in consciousness. Neuron 2024; 112:1626-1641. [PMID: 38754374 DOI: 10.1016/j.neuron.2024.04.028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 04/16/2024] [Accepted: 04/24/2024] [Indexed: 05/18/2024]
Abstract
The involvement of the prefrontal cortex (PFC) in consciousness is an ongoing focus of intense investigation. An important question is whether representations of conscious contents and experiences in the PFC are confounded by post-perceptual processes related to cognitive functions. Here, I review recent findings suggesting that neuronal representations of consciously perceived contents-in the absence of post-perceptual processes-can indeed be observed in the PFC. Slower ongoing fluctuations in the electrophysiological state of the PFC seem to control the stability and updates of these prefrontal representations of conscious awareness. In addition to conscious perception, the PFC has been shown to play a critical role in controlling the levels of consciousness as observed during anesthesia, while prefrontal lesions can result in severe loss of perceptual awareness. Together, the convergence of these processes in the PFC suggests its integrative role in consciousness and highlights the complex nature of consciousness itself.
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4
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Papadopoulos L, Jo S, Zumwalt K, Wehr M, McCormick DA, Mazzucato L. Modulation of metastable ensemble dynamics explains optimal coding at moderate arousal in auditory cortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.04.588209. [PMID: 38617286 PMCID: PMC11014582 DOI: 10.1101/2024.04.04.588209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Performance during perceptual decision-making exhibits an inverted-U relationship with arousal, but the underlying network mechanisms remain unclear. Here, we recorded from auditory cortex (A1) of behaving mice during passive tone presentation, while tracking arousal via pupillometry. We found that tone discriminability in A1 ensembles was optimal at intermediate arousal, revealing a population-level neural correlate of the inverted-U relationship. We explained this arousal-dependent coding using a spiking network model with a clustered architecture. Specifically, we show that optimal stimulus discriminability is achieved near a transition between a multi-attractor phase with metastable cluster dynamics (low arousal) and a single-attractor phase (high arousal). Additional signatures of this transition include arousal-induced reductions of overall neural variability and the extent of stimulus-induced variability quenching, which we observed in the empirical data. Altogether, this study elucidates computational principles underlying interactions between pupil-linked arousal, sensory processing, and neural variability, and suggests a role for phase transitions in explaining nonlinear modulations of cortical computations.
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Affiliation(s)
| | - Suhyun Jo
- Institute of Neuroscience, University of Oregon, Eugene, Oregon
| | - Kevin Zumwalt
- Institute of Neuroscience, University of Oregon, Eugene, Oregon
| | - Michael Wehr
- Institute of Neuroscience, University of Oregon, Eugene, Oregon and Department of Psychology, University of Oregon, Eugene, Oregon
| | - David A McCormick
- Institute of Neuroscience, University of Oregon, Eugene, Oregon and Department of Biology, University of Oregon, Eugene, Oregon
| | - Luca Mazzucato
- Institute of Neuroscience, University of Oregon, Eugene, Oregon
- Department of Biology, University of Oregon, Eugene, Oregon
- Department of Mathematics, University of Oregon, Eugene, Oregon and Department of Physics, University of Oregon, Eugene, Oregon
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5
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van der Molen T, Spaeth A, Chini M, Bartram J, Dendukuri A, Zhang Z, Bhaskaran-Nair K, Blauvelt LJ, Petzold LR, Hansma PK, Teodorescu M, Hierlemann A, Hengen KB, Hanganu-Opatz IL, Kosik KS, Sharf T. Protosequences in human cortical organoids model intrinsic states in the developing cortex. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.12.29.573646. [PMID: 38234832 PMCID: PMC10793448 DOI: 10.1101/2023.12.29.573646] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2024]
Abstract
Neuronal firing sequences are thought to be the basic building blocks of neural coding and information broadcasting within the brain. However, when sequences emerge during neurodevelopment remains unknown. We demonstrate that structured firing sequences are present in spontaneous activity of human brain organoids and ex vivo neonatal brain slices from the murine somatosensory cortex. We observed a balance between temporally rigid and flexible firing patterns that are emergent phenomena in human brain organoids and early postnatal murine somatosensory cortex, but not in primary dissociated cortical cultures. Our findings suggest that temporal sequences do not arise in an experience-dependent manner, but are rather constrained by an innate preconfigured architecture established during neurogenesis. These findings highlight the potential for brain organoids to further explore how exogenous inputs can be used to refine neuronal circuits and enable new studies into the genetic mechanisms that govern assembly of functional circuitry during early human brain development.
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Affiliation(s)
- Tjitse van der Molen
- Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, CA 93106, USA
- Department of Molecular, Cellular and Developmental Biology, University of California Santa Barbara, Santa Barbara, CA 93106, USA
| | - Alex Spaeth
- UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA
- Department of Electrical and Computer Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA
| | - Mattia Chini
- Institute of Developmental Neurophysiology, Center for Molecular Neurobiology, Hamburg Center of Neuroscience, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany
| | - Julian Bartram
- Department of Biosystems Science and Engineering, ETH Zürich, Klingelbergstrasse 48, 4056 Basel, Switzerland
| | - Aditya Dendukuri
- Department of Computer Science, University of California Santa Barbara, Santa Barbara, CA 93106, USA
| | - Zongren Zhang
- Department of Physics, University of California Santa Barbara, Santa Barbara, CA 93106
| | - Kiran Bhaskaran-Nair
- Department of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA
| | - Lon J. Blauvelt
- UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA
| | - Linda R. Petzold
- Department of Computer Science, University of California Santa Barbara, Santa Barbara, CA 93106, USA
| | - Paul K. Hansma
- Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, CA 93106, USA
- Department of Physics, University of California Santa Barbara, Santa Barbara, CA 93106
| | - Mircea Teodorescu
- UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA
- Department of Electrical and Computer Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA
| | - Andreas Hierlemann
- Department of Biosystems Science and Engineering, ETH Zürich, Klingelbergstrasse 48, 4056 Basel, Switzerland
| | - Keith B. Hengen
- Department of Biology, Washington University in St. Louis, St. Louis, MO 63130, USA
| | - Ileana L. Hanganu-Opatz
- Institute of Developmental Neurophysiology, Center for Molecular Neurobiology, Hamburg Center of Neuroscience, University Medical Center Hamburg-Eppendorf, 20251 Hamburg, Germany
| | - Kenneth S. Kosik
- Neuroscience Research Institute, University of California Santa Barbara, Santa Barbara, CA 93106, USA
- Department of Molecular, Cellular and Developmental Biology, University of California Santa Barbara, Santa Barbara, CA 93106, USA
| | - Tal Sharf
- UC Santa Cruz Genomics Institute, University of California Santa Cruz, Santa Cruz, CA 95060, USA
- Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA
- Institute for the Biology of Stem Cells, University of California Santa Cruz, Santa Cruz, CA 95064, USA
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6
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Tanabe S, Lee H, Wang S, Hudetz AG. Spontaneous and Visual Stimulation Evoked Firing Sequences Are Distinct Under Desflurane Anesthesia. Neuroscience 2023; 528:54-63. [PMID: 37473851 DOI: 10.1016/j.neuroscience.2023.07.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2023] [Revised: 07/09/2023] [Accepted: 07/12/2023] [Indexed: 07/22/2023]
Abstract
Recurring spike sequences are thought to underlie cortical computations and may be essential for information processing in the conscious state. How anesthesia at graded levels may influence spontaneous and stimulus-related spike sequences in visual cortex has not been fully elucidated. We recorded extracellular single-unit activity in the rat primary visual cortex in vivo during wakefulness and three levels of anesthesia produced by desflurane. The latencies of spike sequences within 0-200 ms from the onset of spontaneous UP states and visual flash-evoked responses were compared. During wakefulness, spike latency patterns linked to the local field potential theta cycle were similar to stimulus-evoked patterns. Under desflurane anesthesia, spontaneous UP state sequences differed from flash-evoked sequences due to the recruitment of low-firing excitatory neurons to the UP state. Flash-evoked spike sequences showed higher reliability and longer latency when stimuli were applied during DOWN states compared to UP states. At deeper levels, desflurane altered both UP state and flash-evoked spike sequences by selectively suppressing inhibitory neuron firing. The results reveal desflurane-induced complex changes in cortical firing sequences that may influence visual information processing.
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Affiliation(s)
- Sean Tanabe
- Center for Consciousness Science, Department of Anesthesiology, University of Michigan, Ann Arbor, MI 48105, USA
| | - Heonsoo Lee
- Center for Consciousness Science, Department of Anesthesiology, University of Michigan, Ann Arbor, MI 48105, USA
| | - Shiyong Wang
- Center for Consciousness Science, Department of Anesthesiology, University of Michigan, Ann Arbor, MI 48105, USA
| | - Anthony G Hudetz
- Center for Consciousness Science, Department of Anesthesiology, University of Michigan, Ann Arbor, MI 48105, USA.
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7
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Vaz AP, Wittig JH, Inati SK, Zaghloul KA. Backbone spiking sequence as a basis for preplay, replay, and default states in human cortex. Nat Commun 2023; 14:4723. [PMID: 37550285 PMCID: PMC10406814 DOI: 10.1038/s41467-023-40440-5] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 07/27/2023] [Indexed: 08/09/2023] Open
Abstract
Sequences of spiking activity have been heavily implicated as potential substrates of memory formation and retrieval across many species. A parallel line of recent evidence also asserts that sequential activity may arise from and be constrained by pre-existing network structure. Here we reconcile these two lines of research in the human brain by measuring single unit spiking sequences in the temporal lobe cortex as participants perform an episodic memory task. We find the presence of an average backbone spiking sequence identified during pre-task rest that is stable over time and different cognitive states. We further demonstrate that these backbone sequences are composed of both rigid and flexible sequence elements, and that flexible elements within these sequences serve to promote memory specificity when forming and retrieving new memories. These results support the hypothesis that pre-existing network dynamics serve as a scaffold for ongoing neural activity in the human cortex.
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Affiliation(s)
- Alex P Vaz
- Department of Neurosurgery, University of Pennsylvania, Philadelphia, PA, 19104, USA.
- Surgical Neurology Branch, NINDS, National Institutes of Health, Bethesda, MD, 20892, USA.
| | - John H Wittig
- Surgical Neurology Branch, NINDS, National Institutes of Health, Bethesda, MD, 20892, USA
| | - Sara K Inati
- Office of the Clinical Director, NINDS, National Institutes of Health, Bethesda, MD, 20892, USA
| | - Kareem A Zaghloul
- Surgical Neurology Branch, NINDS, National Institutes of Health, Bethesda, MD, 20892, USA.
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8
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Zhu RJB, Wei XX. Unsupervised approach to decomposing neural tuning variability. Nat Commun 2023; 14:2298. [PMID: 37085524 PMCID: PMC10121715 DOI: 10.1038/s41467-023-37982-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2022] [Accepted: 04/07/2023] [Indexed: 04/23/2023] Open
Abstract
Neural representation is often described by the tuning curves of individual neurons with respect to certain stimulus variables. Despite this tradition, it has become increasingly clear that neural tuning can vary substantially in accordance with a collection of internal and external factors. A challenge we are facing is the lack of appropriate methods to accurately capture the moment-to-moment tuning variability directly from the noisy neural responses. Here we introduce an unsupervised statistical approach, Poisson functional principal component analysis (Pf-PCA), which identifies different sources of systematic tuning fluctuations, moreover encompassing several current models (e.g.,multiplicative gain models) as special cases. Applying this method to neural data recorded from macaque primary visual cortex- a paradigmatic case for which the tuning curve approach has been scientifically essential- we discovered a simple relationship governing the variability of orientation tuning, which unifies different types of gain changes proposed previously. By decomposing the neural tuning variability into interpretable components, our method enables discovery of unexpected structure of the neural code, capturing the influence of the external stimulus drive and internal states simultaneously.
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Affiliation(s)
- Rong J B Zhu
- Institute of Science and Technology for Brain-Inspired Intelligence, Fudan University, Shanghai, China.
- MOE Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence, and MOE Frontiers Center for Brain Science, Shanghai, China.
| | - Xue-Xin Wei
- Department of Neuroscience, The University of Texas at Austin, Austin, USA.
- Department of Psychology, The University of Texas at Austin, Austin, USA.
- Center for Perceptual Systems, The University of Texas at Austin, Austin, USA.
- Center for Theoretical and Computational Neuroscience, The University of Texas at Austin, Austin, USA.
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9
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Dwarakanath A, Kapoor V, Werner J, Safavi S, Fedorov LA, Logothetis NK, Panagiotaropoulos TI. Bistability of prefrontal states gates access to consciousness. Neuron 2023; 111:1666-1683.e4. [PMID: 36921603 DOI: 10.1016/j.neuron.2023.02.027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Revised: 10/24/2022] [Accepted: 02/16/2023] [Indexed: 03/15/2023]
Abstract
Access of sensory information to consciousness has been linked to the ignition of content-specific representations in association cortices. How does ignition interact with intrinsic cortical state fluctuations to give rise to conscious perception? We addressed this question in the prefrontal cortex (PFC) by combining multi-electrode recordings with a binocular rivalry (BR) paradigm inducing spontaneously driven changes in the content of consciousness, inferred from the reflexive optokinetic nystagmus (OKN) pattern. We find that fluctuations between low-frequency (LF, 1-9 Hz) and beta (∼20-40 Hz) local field potentials (LFPs) reflect competition between spontaneous updates and stability of conscious contents, respectively. Both LF and beta events were locally modulated. The phase of the former locked differentially to the competing populations just before a spontaneous transition while the latter synchronized the neuronal ensemble coding the consciously perceived content. These results suggest that prefrontal state fluctuations gate conscious perception by mediating internal states that facilitate perceptual update and stability.
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Affiliation(s)
- Abhilash Dwarakanath
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany; Cognitive Neuroimaging Unit, Institut National de la Santé et de la Recherche Médicale, Commissariat à l'Energie Atomique et aux énergies alternatives, Université Paris-Saclay, NeuroSpin Center, 91191 Gif-sur-Yvette, France.
| | - Vishal Kapoor
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany; International Center for Primate Brain Research, Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), Chinese Academy of Sciences, Shanghai, China
| | - Joachim Werner
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany
| | - Shervin Safavi
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany; International Max Planck Research School, Tübingen 72076, Germany
| | - Leonid A Fedorov
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany
| | - Nikos K Logothetis
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany; Division of Imaging Science and Biomedical Engineering, University of Manchester, Manchester M13 9PT, UK; International Center for Primate Brain Research, Center for Excellence in Brain Science and Intelligence Technology (CEBSIT), Chinese Academy of Sciences, Shanghai, China
| | - Theofanis I Panagiotaropoulos
- Department of Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics, Tübingen 72076, Germany; Cognitive Neuroimaging Unit, Institut National de la Santé et de la Recherche Médicale, Commissariat à l'Energie Atomique et aux énergies alternatives, Université Paris-Saclay, NeuroSpin Center, 91191 Gif-sur-Yvette, France.
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10
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Alkahwaji AM, Shin HS, Lee CJ. Negative Influence of the Hunger State on Rule-observance Behavior in Mice. Exp Neurobiol 2023; 32:31-41. [PMID: 36919334 PMCID: PMC10017842 DOI: 10.5607/en22036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 02/28/2023] [Accepted: 02/28/2023] [Indexed: 03/16/2023] Open
Abstract
Developing social strategies to share limited resources equally and maximize the long-term benefits of conflict resolution is critical for appropriate social interactions. During social interactions, social decision-making depends not only on the external environment, but also on internal factors, such as hunger, thirst, or fatigue. In particular, hunger, which is related to food as a physical need, plays a dominant role in social decision-making. However, the consequences of food deprivation on social decision-making are not well understood. We have previously shown that mice with rule-observance behavior are capable of resolving conflict during social decision-making by observing a well-established social strategy based on reward zone allocation. Here, we developed a rule-observance behavior paradigm wherein the hunger state is achieved by applying food restrictions on mice prior to social behavior experiments. We found that the hunger state in mice deteriorated the established social strategy by decreasing reaction time, implying an increase in impulsivity. In contrast, the hunger state did not affect reward zone allocation, indicating no effect on spatial memory. This decrease in reaction time led to a significant increase in the percentage of violations during rule observance and a significant decrease in the amount of reward (payoff equity). Our study proposes that the hunger state exerts a detrimental effect on appropriate social decision-making by decreasing reaction time, increasing violation, and decreasing payoff equity in rule-observance behavior.
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Affiliation(s)
- Abdelrahman M Alkahwaji
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon 34141, Korea.,IBS School, University of Science and Technology, Daejeon 34141, Korea
| | - Hee-Sup Shin
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon 34141, Korea.,IBS School, University of Science and Technology, Daejeon 34141, Korea
| | - C Justin Lee
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon 34141, Korea.,IBS School, University of Science and Technology, Daejeon 34141, Korea
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11
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Karimi Abadchi J, Rezaei Z, Knöpfel T, McNaughton BL, Mohajerani MH. Inhibition is a prevalent mode of activity in the neocortex around awake hippocampal ripples in mice. eLife 2023; 12:79513. [PMID: 36645126 PMCID: PMC9876570 DOI: 10.7554/elife.79513] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2022] [Accepted: 01/06/2023] [Indexed: 01/17/2023] Open
Abstract
Coordinated peri-ripple activity in the hippocampal-neocortical network is essential for mnemonic information processing in the brain. Hippocampal ripples likely serve different functions in sleep and awake states. Thus, the corresponding neocortical activity patterns may differ in important ways. We addressed this possibility by conducting voltage and glutamate wide-field imaging of the neocortex with concurrent hippocampal electrophysiology in awake mice. Contrary to our previously published sleep results, deactivation and activation were dominant in post-ripple neocortical voltage and glutamate activity, respectively, especially in the agranular retrosplenial cortex (aRSC). Additionally, the spiking activity of aRSC neurons, estimated by two-photon calcium imaging, revealed the existence of two subpopulations of excitatory neurons with opposite peri-ripple modulation patterns: one increases and the other decreases firing rate. These differences in peri-ripple spatiotemporal patterns of neocortical activity in sleep versus awake states might underlie the reported differences in the function of sleep versus awake ripples.
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Affiliation(s)
- Javad Karimi Abadchi
- Canadian Centre for Behavioral Neuroscience, University of LethbridgeLethbridgeCanada
| | - Zahra Rezaei
- Canadian Centre for Behavioral Neuroscience, University of LethbridgeLethbridgeCanada
| | - Thomas Knöpfel
- Laboratory for Neuronal Circuit Dynamics, Imperial College LondonLondonUnited Kingdom
- Department of Physics, Hong Kong Baptist UniversityKowloon TongHong Kong
| | - Bruce L McNaughton
- Canadian Centre for Behavioral Neuroscience, University of LethbridgeLethbridgeCanada
- Department of Neurobiology and Behavior, University of CaliforniaIrvineUnited States
| | - Majid H Mohajerani
- Canadian Centre for Behavioral Neuroscience, University of LethbridgeLethbridgeCanada
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12
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Graham DJ. Nine insights from internet engineering that help us understand brain network communication. FRONTIERS IN COMPUTER SCIENCE 2023. [DOI: 10.3389/fcomp.2022.976801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
Philosophers have long recognized the value of metaphor as a tool that opens new avenues of investigation. By seeing brains as having the goal of representation, the computer metaphor in its various guises has helped systems neuroscience approach a wide array of neuronal behaviors at small and large scales. Here I advocate a complementary metaphor, the internet. Adopting this metaphor shifts our focus from computing to communication, and from seeing neuronal signals as localized representational elements to seeing neuronal signals as traveling messages. In doing so, we can take advantage of a comparison with the internet's robust and efficient routing strategies to understand how the brain might meet the challenges of network communication. I lay out nine engineering strategies that help the internet solve routing challenges similar to those faced by brain networks. The internet metaphor helps us by reframing neuronal activity across the brain as, in part, a manifestation of routing, which may, in different parts of the system, resemble the internet more, less, or not at all. I describe suggestive evidence consistent with the brain's use of internet-like routing strategies and conclude that, even if empirical data do not directly implicate internet-like routing, the metaphor is valuable as a reference point for those investigating the difficult problem of network communication in the brain and in particular the problem of routing.
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13
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Scott DN, Frank MJ. Adaptive control of synaptic plasticity integrates micro- and macroscopic network function. Neuropsychopharmacology 2023; 48:121-144. [PMID: 36038780 PMCID: PMC9700774 DOI: 10.1038/s41386-022-01374-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 06/23/2022] [Accepted: 06/24/2022] [Indexed: 11/09/2022]
Abstract
Synaptic plasticity configures interactions between neurons and is therefore likely to be a primary driver of behavioral learning and development. How this microscopic-macroscopic interaction occurs is poorly understood, as researchers frequently examine models within particular ranges of abstraction and scale. Computational neuroscience and machine learning models offer theoretically powerful analyses of plasticity in neural networks, but results are often siloed and only coarsely linked to biology. In this review, we examine connections between these areas, asking how network computations change as a function of diverse features of plasticity and vice versa. We review how plasticity can be controlled at synapses by calcium dynamics and neuromodulatory signals, the manifestation of these changes in networks, and their impacts in specialized circuits. We conclude that metaplasticity-defined broadly as the adaptive control of plasticity-forges connections across scales by governing what groups of synapses can and can't learn about, when, and to what ends. The metaplasticity we discuss acts by co-opting Hebbian mechanisms, shifting network properties, and routing activity within and across brain systems. Asking how these operations can go awry should also be useful for understanding pathology, which we address in the context of autism, schizophrenia and Parkinson's disease.
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Affiliation(s)
- Daniel N Scott
- Cognitive Linguistic, and Psychological Sciences, Brown University, Providence, RI, USA.
- Carney Institute for Brain Science, Brown University, Providence, RI, USA.
| | - Michael J Frank
- Cognitive Linguistic, and Psychological Sciences, Brown University, Providence, RI, USA.
- Carney Institute for Brain Science, Brown University, Providence, RI, USA.
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14
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Uehara K, Togo H, Hanakawa T. Precise motor rhythmicity relies on motor network responsivity. Cereb Cortex 2022; 33:4432-4447. [PMID: 36218995 DOI: 10.1093/cercor/bhac353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Revised: 08/14/2022] [Accepted: 08/15/2022] [Indexed: 11/14/2022] Open
Abstract
Rhythmic movements are the building blocks of human behavior. However, given that rhythmic movements are achieved through complex interactions between neural modules, it remains difficult to clarify how the central nervous system controls motor rhythmicity. Here, using a novel tempo-precision trade-off paradigm, we first modeled interindividual behavioral differences in tempo-dependent rhythmicity for various external tempi. We identified 2 behavioral extremes: conventional and paradoxical tempo-precision trade-off types. We then explored the neural substrates of these behavioral differences using task and resting-state functional magnetic resonance imaging. We found that the responsibility of interhemispheric motor network connectivity to tempi was a key to the behavioral repertoire. In the paradoxical trade-off type, interhemispheric connectivity was low at baseline but increased in response to increasing tempo; in the conventional trade-off type, strong baseline connectivity was coupled with low responsivity. These findings suggest that tunable interhemispheric connectivity underlies tempo-dependent rhythmicity control.
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Affiliation(s)
- Kazumasa Uehara
- Department of Advanced Neuroimaging, Integrative Brain Imaging Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo 1878551, Japan.,Division of Neural Dynamics, Department of System Neuroscience, National Institute for Physiological Sciences, Okazaki, Aichi 4448585, Japan.,Department of Physiological Sciences, School of Life Sciences, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi 4448585, Japan
| | - Hiroki Togo
- Department of Advanced Neuroimaging, Integrative Brain Imaging Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo 1878551, Japan.,Department of Integrated Neuroanatomy and Neuroimaging, Kyoto University Graduate School of Medicine, Kyoto 6068501, Japan
| | - Takashi Hanakawa
- Department of Advanced Neuroimaging, Integrative Brain Imaging Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo 1878551, Japan.,Department of Integrated Neuroanatomy and Neuroimaging, Kyoto University Graduate School of Medicine, Kyoto 6068501, Japan
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15
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Nitzan N, Swanson R, Schmitz D, Buzsáki G. Brain-wide interactions during hippocampal sharp wave ripples. Proc Natl Acad Sci U S A 2022; 119:e2200931119. [PMID: 35561219 PMCID: PMC9171920 DOI: 10.1073/pnas.2200931119] [Citation(s) in RCA: 33] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 04/05/2022] [Indexed: 12/16/2022] Open
Abstract
During periods of disengagement from the environment, transient population bursts, known as sharp wave ripples (SPW-Rs), occur sporadically. While numerous experiments have characterized the bidirectional relationship between SPW-Rs and activity in chosen brain areas, the topographic relationship between different segments of the hippocampus and brain-wide target areas has not been studied at high temporal and spatial resolution. Yet, such knowledge is necessary to infer the direction of communication. We analyzed two publicly available datasets with simultaneous high-density silicon probe recordings from across the mouse forebrain. We found that SPW-Rs coincide with a transient brain-wide increase in functional connectivity. In addition, we show that the diversity in SPW-R features, such as their incidence, magnitude, and intrahippocampal topography in the septotemporal axis, are correlated with slower excitability fluctuations in cortical and subcortical areas. Further, variations in SPW-R features correlated with the timing, sign, and magnitude of downstream responses with large-amplitude SPW-Rs followed by transient silence in extrahippocampal structures. Our findings expand on previous results and demonstrate that the activity patterns in extrahippocampal structures depend both on the intrahippocampal topographic origin and magnitude of hippocampal SPW-Rs.
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Affiliation(s)
- Noam Nitzan
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY 10016
| | - Rachel Swanson
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY 10016
| | - Dietmar Schmitz
- Charité-Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, 10117 Berlin, Germany
- Neuroscience Research Center, Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany
| | - György Buzsáki
- Neuroscience Institute, Langone Medical Center, New York University, New York, NY 10016
- Department of Neurology, Langone Medical Center, New York University, New York, NY 10016
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16
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Brinkman BAW, Yan H, Maffei A, Park IM, Fontanini A, Wang J, La Camera G. Metastable dynamics of neural circuits and networks. APPLIED PHYSICS REVIEWS 2022; 9:011313. [PMID: 35284030 PMCID: PMC8900181 DOI: 10.1063/5.0062603] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Accepted: 01/31/2022] [Indexed: 05/14/2023]
Abstract
Cortical neurons emit seemingly erratic trains of action potentials or "spikes," and neural network dynamics emerge from the coordinated spiking activity within neural circuits. These rich dynamics manifest themselves in a variety of patterns, which emerge spontaneously or in response to incoming activity produced by sensory inputs. In this Review, we focus on neural dynamics that is best understood as a sequence of repeated activations of a number of discrete hidden states. These transiently occupied states are termed "metastable" and have been linked to important sensory and cognitive functions. In the rodent gustatory cortex, for instance, metastable dynamics have been associated with stimulus coding, with states of expectation, and with decision making. In frontal, parietal, and motor areas of macaques, metastable activity has been related to behavioral performance, choice behavior, task difficulty, and attention. In this article, we review the experimental evidence for neural metastable dynamics together with theoretical approaches to the study of metastable activity in neural circuits. These approaches include (i) a theoretical framework based on non-equilibrium statistical physics for network dynamics; (ii) statistical approaches to extract information about metastable states from a variety of neural signals; and (iii) recent neural network approaches, informed by experimental results, to model the emergence of metastable dynamics. By discussing these topics, we aim to provide a cohesive view of how transitions between different states of activity may provide the neural underpinnings for essential functions such as perception, memory, expectation, or decision making, and more generally, how the study of metastable neural activity may advance our understanding of neural circuit function in health and disease.
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Affiliation(s)
| | - H. Yan
- State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, People's Republic of China
| | | | | | | | - J. Wang
- Authors to whom correspondence should be addressed: and
| | - G. La Camera
- Authors to whom correspondence should be addressed: and
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17
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Abstract
Understanding how the brain learns may lead to machines with human-like intellectual capacities. It was previously proposed that the brain may operate on the principle of predictive coding. However, it is still not well understood how a predictive system could be implemented in the brain. Here we demonstrate that the ability of a single neuron to predict its future activity may provide an effective learning mechanism. Interestingly, this predictive learning rule can be derived from a metabolic principle, where neurons need to minimize their own synaptic activity (cost), while maximizing their impact on local blood supply by recruiting other neurons. We show how this mathematically derived learning rule can provide a theoretical connection between diverse types of brain-inspired algorithms, thus, offering a step toward development of a general theory of neuronal learning. We tested this predictive learning rule in neural network simulations and in data recorded from awake animals. Our results also suggest that spontaneous brain activity provides “training data” for neurons to learn to predict cortical dynamics. Thus, the ability of a single neuron to minimize surprise: i.e. the difference between actual and expected activity, could be an important missing element to understand computation in the brain.
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18
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Rezayat E, Clark K, Dehaqani MRA, Noudoost B. Dependence of Working Memory on Coordinated Activity Across Brain Areas. Front Syst Neurosci 2022; 15:787316. [PMID: 35095433 PMCID: PMC8792503 DOI: 10.3389/fnsys.2021.787316] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Accepted: 12/06/2021] [Indexed: 11/15/2022] Open
Abstract
Neural signatures of working memory (WM) have been reported in numerous brain areas, suggesting a distributed neural substrate for memory maintenance. In the current manuscript we provide an updated review of the literature focusing on intracranial neurophysiological recordings during WM in primates. Such signatures of WM include changes in firing rate or local oscillatory power within an area, along with measures of coordinated activity between areas based on synchronization between oscillations. In comparing the ability of various neural signatures in any brain area to predict behavioral performance, we observe that synchrony between areas is more frequently and robustly correlated with WM performance than any of the within-area neural signatures. We further review the evidence for alteration of inter-areal synchrony in brain disorders, consistent with an important role for such synchrony during behavior. Additionally, results of causal studies indicate that manipulating synchrony across areas is especially effective at influencing WM task performance. Each of these lines of research supports the critical role of inter-areal synchrony in WM. Finally, we propose a framework for interactions between prefrontal and sensory areas during WM, incorporating a range of experimental findings and offering an explanation for the observed link between intra-areal measures and WM performance.
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Affiliation(s)
- Ehsan Rezayat
- School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
| | - Kelsey Clark
- Department of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, UT, United States
| | - Mohammad-Reza A. Dehaqani
- School of Cognitive Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
- Cognitive Systems Laboratory, Control and Intelligent Processing Center of Excellence (CIPCE), School of Electrical and Computer Engineering, College of Engineering, University of Tehran, Tehran, Iran
| | - Behrad Noudoost
- Department of Ophthalmology and Visual Sciences, University of Utah, Salt Lake City, UT, United States
- *Correspondence: Behrad Noudoost,
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19
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Kullmann R, Knoll G, Bernardi D, Lindner B. Critical current for giant Fano factor in neural models with bistable firing dynamics and implications for signal transmission. Phys Rev E 2022; 105:014416. [PMID: 35193262 DOI: 10.1103/physreve.105.014416] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 01/05/2022] [Indexed: 06/14/2023]
Abstract
Bistability in the firing rate is a prominent feature in different types of neurons as well as in neural networks. We show that for a constant input below a critical value, such bistability can lead to a giant spike-count diffusion. We study the transmission of a periodic signal and demonstrate that close to the critical bias current, the signal-to-noise ratio suffers a sharp increase, an effect that can be traced back to the giant diffusion and large Fano factor.
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Affiliation(s)
- Richard Kullmann
- Bernstein Center for Computational Neuroscience Berlin, Philippstrasse 13, Haus 2, 10115 Berlin, Germany
- Physics Department of Humboldt University Berlin, Newtonstrasse 15, 12489 Berlin, Germany
| | - Gregory Knoll
- Bernstein Center for Computational Neuroscience Berlin, Philippstrasse 13, Haus 2, 10115 Berlin, Germany
- Physics Department of Humboldt University Berlin, Newtonstrasse 15, 12489 Berlin, Germany
| | - Davide Bernardi
- Center for Translational Neurophysiology of Speech and Communication, Fondazione Istituto Italiano di Tecnologia, via Fossato di Mortara 19, 44121 Ferrara, Italy
| | - Benjamin Lindner
- Bernstein Center for Computational Neuroscience Berlin, Philippstrasse 13, Haus 2, 10115 Berlin, Germany
- Physics Department of Humboldt University Berlin, Newtonstrasse 15, 12489 Berlin, Germany
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20
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Davis ZW, Benigno GB, Fletterman C, Desbordes T, Steward C, Sejnowski TJ, H Reynolds J, Muller L. Spontaneous traveling waves naturally emerge from horizontal fiber time delays and travel through locally asynchronous-irregular states. Nat Commun 2021; 12:6057. [PMID: 34663796 PMCID: PMC8523565 DOI: 10.1038/s41467-021-26175-1] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Accepted: 09/17/2021] [Indexed: 11/25/2022] Open
Abstract
Studies of sensory-evoked neuronal responses often focus on mean spike rates, with fluctuations treated as internally-generated noise. However, fluctuations of spontaneous activity, often organized as traveling waves, shape stimulus-evoked responses and perceptual sensitivity. The mechanisms underlying these waves are unknown. Further, it is unclear whether waves are consistent with the low rate and weakly correlated “asynchronous-irregular” dynamics observed in cortical recordings. Here, we describe a large-scale computational model with topographically-organized connectivity and conduction delays relevant to biological scales. We find that spontaneous traveling waves are a general property of these networks. The traveling waves that occur in the model are sparse, with only a small fraction of neurons participating in any individual wave. Consequently, they do not induce measurable spike correlations and remain consistent with locally asynchronous irregular states. Further, by modulating local network state, they can shape responses to incoming inputs as observed in vivo. Spontaneous traveling cortical waves shape neural responses. Using a large-scale computational model, the authors show that transmission delays shape locally asynchronous spiking dynamics into traveling waves without inducing correlations and boost responses to external input, as observed in vivo.
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Affiliation(s)
- Zachary W Davis
- The Salk Institute for Biological Studies, La Jolla, CA, USA.
| | - Gabriel B Benigno
- Department of Applied Mathematics, Western University, London, ON, Canada.,Brain and Mind Institute, Western University, London, ON, Canada
| | | | - Theo Desbordes
- The Salk Institute for Biological Studies, La Jolla, CA, USA
| | | | | | - John H Reynolds
- The Salk Institute for Biological Studies, La Jolla, CA, USA.
| | - Lyle Muller
- Department of Applied Mathematics, Western University, London, ON, Canada. .,Brain and Mind Institute, Western University, London, ON, Canada.
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21
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Vanattou-Saïfoudine N, Han C, Krause R, Vasilaki E, von der Behrens W, Indiveri G. A robust model of Stimulus-Specific Adaptation validated on neuromorphic hardware. Sci Rep 2021; 11:17904. [PMID: 34504155 PMCID: PMC8429557 DOI: 10.1038/s41598-021-97217-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Accepted: 08/10/2021] [Indexed: 02/08/2023] Open
Abstract
Stimulus-Specific Adaptation (SSA) to repetitive stimulation is a phenomenon that has been observed across many different species and in several brain sensory areas. It has been proposed as a computational mechanism, responsible for separating behaviorally relevant information from the continuous stream of sensory information. Although SSA can be induced and measured reliably in a wide variety of conditions, the network details and intracellular mechanisms giving rise to SSA still remain unclear. Recent computational studies proposed that SSA could be associated with a fast and synchronous neuronal firing phenomenon called Population Spikes (PS). Here, we test this hypothesis using a mean-field rate model and corroborate it using a neuromorphic hardware. As the neuromorphic circuits used in this study operate in real-time with biologically realistic time constants, they can reproduce the same dynamics observed in biological systems, together with the exploration of different connectivity schemes, with complete control of the system parameter settings. Besides, the hardware permits the iteration of multiple experiments over many trials, for extended amounts of time and without losing the networks and individual neural processes being studied. Following this "neuromorphic engineering" approach, we therefore study the PS hypothesis in a biophysically inspired recurrent networks of spiking neurons and evaluate the role of different linear and non-linear dynamic computational primitives such as spike-frequency adaptation or short-term depression (STD). We compare both the theoretical mean-field model of SSA and PS to previously obtained experimental results in the area of novelty detection and observe its behavior on its neuromorphic physical equivalent model. We show how the approach proposed can be extended to other computational neuroscience modelling efforts for understanding high-level phenomena in mechanistic models.
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Affiliation(s)
- Natacha Vanattou-Saïfoudine
- Institute of Neuroinformatics, University of Zurich and ETH Zurich, Zurich, Switzerland.
- Department of Computer Science, University of Sheffield, Sheffield, UK.
| | - Chao Han
- Department of Computer Science, University of Sheffield, Sheffield, UK
| | - Renate Krause
- Institute of Neuroinformatics, University of Zurich and ETH Zurich, Zurich, Switzerland
| | - Eleni Vasilaki
- Department of Computer Science, University of Sheffield, Sheffield, UK
| | | | - Giacomo Indiveri
- Institute of Neuroinformatics, University of Zurich and ETH Zurich, Zurich, Switzerland
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22
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Hayden DJ, Montgomery DP, Cooke SF, Bear MF. Visual Recognition Is Heralded by Shifts in Local Field Potential Oscillations and Inhibitory Networks in Primary Visual Cortex. J Neurosci 2021; 41:6257-6272. [PMID: 34103358 PMCID: PMC8287992 DOI: 10.1523/jneurosci.0391-21.2021] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Revised: 05/18/2021] [Accepted: 05/19/2021] [Indexed: 11/22/2022] Open
Abstract
Learning to recognize and filter familiar, irrelevant sensory stimuli eases the computational burden on the cerebral cortex. Inhibition is a candidate mechanism in this filtration process, and oscillations in the cortical local field potential (LFP) serve as markers of the engagement of different inhibitory neurons. We show here that LFP oscillatory activity in visual cortex is profoundly altered as male and female mice learn to recognize an oriented grating stimulus-low-frequency (∼15 Hz peak) power sharply increases, whereas high-frequency (∼65 Hz peak) power decreases. These changes report recognition of the familiar pattern as they disappear when the stimulus is rotated to a novel orientation. Two-photon imaging of neuronal activity reveals that parvalbumin-expressing inhibitory neurons disengage with familiar stimuli and reactivate to novelty, whereas somatostatin-expressing inhibitory neurons show opposing activity patterns. We propose a model in which the balance of two interacting interneuron circuits shifts as novel stimuli become familiar.SIGNIFICANCE STATEMENT Habituation, familiarity, and novelty detection are fundamental cognitive processes that enable organisms to adaptively filter meaningless stimuli and focus attention on potentially important elements of their environment. We have shown that this process can be studied fruitfully in the mouse primary visual cortex by using simple grating stimuli for which novelty and familiarity are defined by orientation and by measuring stimulus-evoked and continuous local field potentials. Altered event-related and spontaneous potentials, and deficient habituation, are well-documented features of several neurodevelopmental psychiatric disorders. The paradigm described here will be valuable to interrogate the origins of these signals and the meaning of their disruption more deeply.
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Affiliation(s)
- Dustin J Hayden
- Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139
| | - Daniel P Montgomery
- Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139
| | - Samuel F Cooke
- Medical Research Council Centre for Neurodevelopmental Disorders, Department of Basic and Clinical Neurosciences, Institute of Psychiatry, Psychology, and Neuroscience, King's College London, London SE5 9RT, England
| | - Mark F Bear
- Picower Institute for Learning and Memory, Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139
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23
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Wolff A, Chen L, Tumati S, Golesorkhi M, Gomez-Pilar J, Hu J, Jiang S, Mao Y, Longtin A, Northoff G. Prestimulus dynamics blend with the stimulus in neural variability quenching. Neuroimage 2021; 238:118160. [PMID: 34058331 DOI: 10.1016/j.neuroimage.2021.118160] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 04/30/2021] [Accepted: 05/09/2021] [Indexed: 01/08/2023] Open
Abstract
Neural responses to the same stimulus show significant variability over trials, with this variability typically reduced (quenched) after a stimulus is presented. This trial-to-trial variability (TTV) has been much studied, however how this neural variability quenching is influenced by the ongoing dynamics of the prestimulus period is unknown. Utilizing a human intracranial stereo-electroencephalography (sEEG) data set, we investigate how prestimulus dynamics, as operationalized by standard deviation (SD), shapes poststimulus activity through trial-to-trial variability (TTV). We first observed greater poststimulus variability quenching in those real trials exhibiting high prestimulus variability as observed in all frequency bands. Next, we found that the relative effect of the stimulus was higher in the later (300-600ms) than the earlier (0-300ms) poststimulus period. Lastly, we replicate our findings in a separate EEG dataset and extend them by finding that trials with high prestimulus variability in the theta and alpha bands had faster reaction times. Together, our results demonstrate that stimulus-related activity, including its variability, is a blend of two factors: 1) the effects of the external stimulus itself, and 2) the effects of the ongoing dynamics spilling over from the prestimulus period - the state at stimulus onset - with the second dwarfing the influence of the first.
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Affiliation(s)
- Annemarie Wolff
- University of Ottawa Institute of Mental Health Research, Ottawa, Canada.
| | - Liang Chen
- Department of Neurological Surgery, Huashan Hospital, Fudan University, Wulumuqi Middle Rd, Shanghai, China.
| | - Shankar Tumati
- University of Ottawa Institute of Mental Health Research, Ottawa, Canada
| | - Mehrshad Golesorkhi
- School of Electrical Engineering and Computer Science, University of Ottawa, Ottawa, Canada
| | - Javier Gomez-Pilar
- Biomedical Engineering Group, Higher Technical School of Telecommunications Engineering, University of Valladolid, Valladolid, Spain; Centro de Investigación Biomédica en Red-Bioingeniería, Biomateriales y Nanomedicina, (CIBER-BBN), Spain
| | - Jie Hu
- Department of Neurological Surgery, Huashan Hospital, Fudan University, Wulumuqi Middle Rd, Shanghai, China
| | - Shize Jiang
- Department of Neurological Surgery, Huashan Hospital, Fudan University, Wulumuqi Middle Rd, Shanghai, China
| | - Ying Mao
- Department of Neurological Surgery, Huashan Hospital, Fudan University, Wulumuqi Middle Rd, Shanghai, China
| | - André Longtin
- Brain and Mind Research Institute, University of Ottawa, Ottawa, Canada; Physics Department, University of Ottawa, Ottawa, Canada
| | - Georg Northoff
- University of Ottawa Institute of Mental Health Research, Ottawa, Canada; Brain and Mind Research Institute, University of Ottawa, Ottawa, Canada
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24
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O'Reilly RC, Russin JL, Zolfaghar M, Rohrlich J. Deep Predictive Learning in Neocortex and Pulvinar. J Cogn Neurosci 2021; 33:1158-1196. [PMID: 34428793 PMCID: PMC10164227 DOI: 10.1162/jocn_a_01708] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
How do humans learn from raw sensory experience? Throughout life, but most obviously in infancy, we learn without explicit instruction. We propose a detailed biological mechanism for the widely embraced idea that learning is driven by the differences between predictions and actual outcomes (i.e., predictive error-driven learning). Specifically, numerous weak projections into the pulvinar nucleus of the thalamus generate top-down predictions, and sparse driver inputs from lower areas supply the actual outcome, originating in Layer 5 intrinsic bursting neurons. Thus, the outcome representation is only briefly activated, roughly every 100 msec (i.e., 10 Hz, alpha), resulting in a temporal difference error signal, which drives local synaptic changes throughout the neocortex. This results in a biologically plausible form of error backpropagation learning. We implemented these mechanisms in a large-scale model of the visual system and found that the simulated inferotemporal pathway learns to systematically categorize 3-D objects according to invariant shape properties, based solely on predictive learning from raw visual inputs. These categories match human judgments on the same stimuli and are consistent with neural representations in inferotemporal cortex in primates.
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25
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van Kempen J, Gieselmann MA, Boyd M, Steinmetz NA, Moore T, Engel TA, Thiele A. Top-down coordination of local cortical state during selective attention. Neuron 2021; 109:894-904.e8. [PMID: 33406410 PMCID: PMC7927916 DOI: 10.1016/j.neuron.2020.12.013] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Revised: 11/20/2020] [Accepted: 12/16/2020] [Indexed: 11/30/2022]
Abstract
Spontaneous fluctuations in cortical excitability influence sensory processing and behavior. These fluctuations, long thought to reflect global changes in cortical state, were recently found to be modulated locally within a retinotopic map during spatially selective attention. We report that periods of vigorous (On) and faint (Off) spiking activity, the signature of cortical state fluctuations, are coordinated across brain areas with retinotopic precision. Top-down attention enhanced interareal local state coordination, traversing along the reverse cortical hierarchy. The extent of local state coordination between areas was predictive of behavioral performance. Our results show that cortical state dynamics are shared across brain regions, modulated by cognitive demands and relevant for behavior.
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Affiliation(s)
- Jochem van Kempen
- Biosciences Institute, Newcastle University, Newcastle upon Tyne NE1 7RU, UK.
| | - Marc A Gieselmann
- Biosciences Institute, Newcastle University, Newcastle upon Tyne NE1 7RU, UK
| | - Michael Boyd
- Biosciences Institute, Newcastle University, Newcastle upon Tyne NE1 7RU, UK
| | - Nicholas A Steinmetz
- Department of Biological Structure, University of Washington, Seattle, WA 98195, USA
| | - Tirin Moore
- Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA
| | - Tatiana A Engel
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA
| | - Alexander Thiele
- Biosciences Institute, Newcastle University, Newcastle upon Tyne NE1 7RU, UK
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26
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Ros T, Kwiek J, Andriot T, Michela A, Vuilleumier P, Garibotto V, Ginovart N. PET Imaging of Dopamine Neurotransmission During EEG Neurofeedback. Front Physiol 2021; 11:590503. [PMID: 33584328 PMCID: PMC7873858 DOI: 10.3389/fphys.2020.590503] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2020] [Accepted: 12/09/2020] [Indexed: 11/13/2022] Open
Abstract
Neurofeedback (NFB) is a brain-based training method that enables users to control their own cortical oscillations using real-time feedback from the electroencephalogram (EEG). Importantly, no investigations to date have directly explored the potential impact of NFB on the brain's key neuromodulatory systems. Our study's objective was to assess the capacity of NFB to induce dopamine release as revealed by positron emission tomography (PET). Thirty-two healthy volunteers were randomized to either EEG-neurofeedback (NFB) or EEG-electromyography (EMG), and scanned while performing self-regulation during a single session of dynamic PET brain imaging using the high affinity D2/3 receptor radiotracer, [18F]Fallypride. NFB and EMG groups down-regulated cortical alpha power and facial muscle tone, respectively. Task-induced effects on endogenous dopamine release were estimated in the frontal cortex, anterior cingulate cortex, and thalamus, using the linearized simplified reference region model (LSRRM), which accounts for time-dependent changes in radiotracer binding following task initiation. Contrary to our hypothesis of a differential effect for NFB vs. EMG training, significant dopamine release was observed in both training groups in the frontal and anterior cingulate cortex, but not in thalamus. Interestingly, a significant negative correlation was observed between dopamine release in frontal cortex and pre-to-post NFB change in spontaneous alpha power, suggesting that intra-individual changes in brain state (i.e., alpha power) could partly result from changes in neuromodulatory tone. Overall, our findings constitute the first direct investigation of neurofeedback's effect on the endogenous release of a key neuromodulator, demonstrating its feasibility and paving the way for future studies using this methodology.
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Affiliation(s)
- Tomas Ros
- Department of Basic Neurosciences, University of Geneva, Geneva, Switzerland
- CIBM Center for Biomedical Imaging, Lausanne, Switzerland
| | - Jessica Kwiek
- Department of Basic Neurosciences, University of Geneva, Geneva, Switzerland
- Department of Psychiatry, University of Geneva, Geneva, Switzerland
| | - Theo Andriot
- Department of Basic Neurosciences, University of Geneva, Geneva, Switzerland
| | - Abele Michela
- Department of Basic Neurosciences, University of Geneva, Geneva, Switzerland
| | - Patrik Vuilleumier
- Department of Basic Neurosciences, University of Geneva, Geneva, Switzerland
| | - Valentina Garibotto
- Division of Nuclear Medicine and Molecular Imaging, Department of Medical Imaging, Geneva University Hospitals, Geneva, Switzerland
| | - Nathalie Ginovart
- Department of Basic Neurosciences, University of Geneva, Geneva, Switzerland
- Department of Psychiatry, University of Geneva, Geneva, Switzerland
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27
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Pairwise Synchrony and Correlations Depend on the Structure of the Population Code in Visual Cortex. Cell Rep 2020; 33:108367. [PMID: 33176154 DOI: 10.1016/j.celrep.2020.108367] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Revised: 12/28/2019] [Accepted: 10/19/2020] [Indexed: 11/22/2022] Open
Abstract
In visual areas of primates, neurons activate in parallel while the animal is engaged in a behavioral task. In this study, we examine the structure of the population code while the animal performs delayed match-to-sample tasks on complex natural images. The macaque monkeys visualized two consecutive stimuli that were either the same or different, while being recorded with laminar arrays across the cortical depth in cortical areas V1 and V4. We decode correct choice behavior from neural populations of simultaneously recorded units. Utilizing decoding weights, we divide neurons into most informative and less informative and show that most informative neurons in V4, but not in V1, are more strongly synchronized, coupled, and correlated than less informative neurons. Because neurons are divided into two coding pools according to their coding preference, in V4, but not in V1, spiking synchrony, coupling, and correlations within the coding pool are stronger than across coding pools.
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28
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Davis ZW, Muller L, Martinez-Trujillo J, Sejnowski T, Reynolds JH. Spontaneous travelling cortical waves gate perception in behaving primates. Nature 2020; 587:432-436. [PMID: 33029013 PMCID: PMC7677221 DOI: 10.1038/s41586-020-2802-y] [Citation(s) in RCA: 87] [Impact Index Per Article: 21.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2019] [Accepted: 07/10/2020] [Indexed: 01/20/2023]
Abstract
Perceptual sensitivity varies from moment to moment. One potential source of variability is spontaneous fluctuations in cortical activity that can travel as a wave1. Spontaneous traveling waves have been reported during anesthesia2–7, but it is not known whether spontaneous traveling waves play a role during waking perception. Using newly developed analytic techniques to characterize the moment-to-moment dynamics of noisy multielectrode data, we find spontaneous waves of activity in extrastriate visual cortex of awake, behaving marmosets (Callithrix jacchus). In monkeys trained to detect faint visual targets, the timing and position of spontaneous traveling waves, prior to target onset, predict the magnitude of target-evoked activity and the likelihood of target detection. In contrast, spatially disorganized fluctuations of neural activity are much less predictive. These results reveal an important role for spontaneous traveling waves in sensory processing through modulating neural and perceptual sensitivity.
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Affiliation(s)
- Zachary W Davis
- The Salk Institute for Biological Studies, La Jolla, CA, USA.
| | - Lyle Muller
- The Salk Institute for Biological Studies, La Jolla, CA, USA.,Department of Applied Mathematics, Western University, London, Ontario, Canada.,Robarts Research and Brain and Mind Institute, Western University, London, Ontario, Canada.,Institut de Neurosciences de la Timone (INT), UMR7289, CNRS, Aix-Marseille Université, Marseille, France
| | - Julio Martinez-Trujillo
- Robarts Research and Brain and Mind Institute, Western University, London, Ontario, Canada.,Department of Physiology and Pharmacology, Schulich School of Medicine and Dentistry, Western University, London, Ontario, Canada.,Department of Psychiatry, Schulich School of Medicine and Dentistry, Western University, London, Ontario, Canada
| | | | - John H Reynolds
- The Salk Institute for Biological Studies, La Jolla, CA, USA.
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29
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Abstract
Contemporary brain research seeks to understand how cognition is reducible to neural activity. Crucially, much of this effort is guided by a scientific paradigm that views neural activity as essentially driven by external stimuli. In contrast, recent perspectives argue that this paradigm is by itself inadequate and that understanding patterns of activity intrinsic to the brain is needed to explain cognition. Yet, despite this critique, the stimulus-driven paradigm still dominates-possibly because a convincing alternative has not been clear. Here, we review a series of findings suggesting such an alternative. These findings indicate that neural activity in the hippocampus occurs in one of three brain states that have radically different anatomical, physiological, representational, and behavioral correlates, together implying different functional roles in cognition. This three-state framework also indicates that neural representations in the hippocampus follow a surprising pattern of organization at the timescale of ∼1 s or longer. Lastly, beyond the hippocampus, recent breakthroughs indicate three parallel states in the cortex, suggesting shared principles and brain-wide organization of intrinsic neural activity.
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Affiliation(s)
- Kenneth Kay
- Howard Hughes Medical Institute, Kavli Institute for Fundamental Neuroscience, Department of Physiology, University of California San Francisco, San Francisco, California
| | - Loren M Frank
- Howard Hughes Medical Institute, Kavli Institute for Fundamental Neuroscience, Department of Physiology, University of California San Francisco, San Francisco, California
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30
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Nitzan N, McKenzie S, Beed P, English DF, Oldani S, Tukker JJ, Buzsáki G, Schmitz D. Propagation of hippocampal ripples to the neocortex by way of a subiculum-retrosplenial pathway. Nat Commun 2020; 11:1947. [PMID: 32327634 PMCID: PMC7181800 DOI: 10.1038/s41467-020-15787-8] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2019] [Accepted: 03/27/2020] [Indexed: 02/07/2023] Open
Abstract
Bouts of high frequency activity known as sharp wave ripples (SPW-Rs) facilitate communication between the hippocampus and neocortex. However, the paths and mechanisms by which SPW-Rs broadcast their content are not well understood. Due to its anatomical positioning, the granular retrosplenial cortex (gRSC) may be a bridge for this hippocampo-cortical dialogue. Using silicon probe recordings in awake, head-fixed mice, we show the existence of SPW-R analogues in gRSC and demonstrate their coupling to hippocampal SPW-Rs. gRSC neurons reliably distinguished different subclasses of hippocampal SPW-Rs according to ensemble activity patterns in CA1. We demonstrate that this coupling is brain state-dependent, and delineate a topographically-organized anatomical pathway via VGlut2-expressing, bursty neurons in the subiculum. Optogenetic stimulation or inhibition of bursty subicular cells induced or reduced responses in superficial gRSC, respectively. These results identify a specific path and underlying mechanisms by which the hippocampus can convey neuronal content to the neocortex during SPW-Rs.
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Affiliation(s)
- Noam Nitzan
- Charité-Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Neuroscience Research Center, Berlin, Germany
| | - Sam McKenzie
- Neuroscience Institute and Department of Neurology New York University Langone Medical Center, New York, NY, 10016, USA
| | - Prateep Beed
- Charité-Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Neuroscience Research Center, Berlin, Germany
| | - Daniel Fine English
- Neuroscience Institute and Department of Neurology New York University Langone Medical Center, New York, NY, 10016, USA
- School of Neuroscience, College of Science, Virginia Tech, VA, 24061, USA
| | - Silvia Oldani
- Charité-Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Neuroscience Research Center, Berlin, Germany
- Center for Neurodegenerative Diseases (DZNE), Berlin, Germany
| | - John J Tukker
- Charité-Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Neuroscience Research Center, Berlin, Germany
- Center for Neurodegenerative Diseases (DZNE), Berlin, Germany
| | - György Buzsáki
- Neuroscience Institute and Department of Neurology New York University Langone Medical Center, New York, NY, 10016, USA.
- Center for Neural Science, New York University, New York, NY, 10016, USA.
| | - Dietmar Schmitz
- Charité-Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, Neuroscience Research Center, Berlin, Germany.
- Center for Neurodegenerative Diseases (DZNE), Berlin, Germany.
- Cluster of Excellence NeuroCure, Berlin, Germany.
- Einstein Center for Neurosciences, Berlin, Germany.
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31
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Ponce-Alvarez A, Mochol G, Hermoso-Mendizabal A, de la Rocha J, Deco G. Cortical state transitions and stimulus response evolve along stiff and sloppy parameter dimensions, respectively. eLife 2020; 9:53268. [PMID: 32181740 PMCID: PMC7108864 DOI: 10.7554/elife.53268] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Accepted: 03/16/2020] [Indexed: 11/26/2022] Open
Abstract
Previous research showed that spontaneous neuronal activity presents sloppiness: the collective behavior is strongly determined by a small number of parameter combinations, defined as ‘stiff’ dimensions, while it is insensitive to many others (‘sloppy’ dimensions). Here, we analyzed neural population activity from the auditory cortex of anesthetized rats while the brain spontaneously transited through different synchronized and desynchronized states and intermittently received sensory inputs. We showed that cortical state transitions were determined by changes in stiff parameters associated with the activity of a core of neurons with low responses to stimuli and high centrality within the observed network. In contrast, stimulus-evoked responses evolved along sloppy dimensions associated with the activity of neurons with low centrality and displaying large ongoing and stimulus-evoked fluctuations without affecting the integrity of the network. Our results shed light on the interplay among stability, flexibility, and responsiveness of neuronal collective dynamics during intrinsic and induced activity.
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Affiliation(s)
- Adrian Ponce-Alvarez
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
| | - Gabriela Mochol
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain
| | | | - Jaime de la Rocha
- Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain
| | - Gustavo Deco
- Center for Brain and Cognition, Computational Neuroscience Group, Department of Information and Communication Technologies, Universitat Pompeu Fabra, Barcelona, Spain.,Institució Catalana de la Recerca i Estudis Avançats (ICREA), Barcelona, Spain.,Department of Neuropsychology, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany.,School of Psychological Sciences, Monash University, Melbourne, Australia
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32
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McGirr A, LeDue J, Chan AW, Boyd JD, Metzak PD, Murphy TH. Stress impacts sensory variability through cortical sensory activity motifs. Transl Psychiatry 2020; 10:20. [PMID: 32066714 PMCID: PMC7026117 DOI: 10.1038/s41398-020-0713-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/04/2019] [Revised: 12/19/2019] [Accepted: 01/02/2020] [Indexed: 12/26/2022] Open
Abstract
Medically unexplained symptoms in depression are common. These individual-specific complaints are often considered an 'idiom of distress', yet animal studies suggest that cortical sensory representations are flexible and influenced by spontaneous cortical activity. We hypothesized that stress would reveal activity dynamics in somatosensory cortex resulting in greater sensory-evoked response variability. Using millisecond resolution in vivo voltage sensitive dye (VSD) imaging in mouse neocortex, we characterized spontaneous regional depolarizations within limb and barrel regions of somatosensory cortex, or spontaneous sensory motifs, and their influence on sensory variability. Stress revealed an idiosyncratic increase in spontaneous sensory motifs that is normalized by selective serotonin reuptake inhibitor treatment. Spontaneous motif frequency is associated with increased variability in sensory-evoked responses, and we optogenetically demonstrate that regional depolarization in somatosensory cortex increases sensory-evoked variability for seconds. This reveals a putative circuit level target for changes in sensory processing and for unexplained physical complaints in stress-related psychopathology.
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Affiliation(s)
- Alexander McGirr
- Department of Psychiatry, University of Calgary, Calgary, AB, Canada. .,Hotchkiss Brain Institute & The Mathison Centre for Mental Health Research and Education, University of Calgary, Calgary, AB, Canada.
| | - Jeffrey LeDue
- grid.17091.3e0000 0001 2288 9830Department of Psychiatry, University of British Columbia, Vancouver, BC Canada ,grid.17091.3e0000 0001 2288 9830Djavad Mowafaghian Brain Research Centre, University of British Columbia, Vancouver, BC Canada
| | - Allen W. Chan
- grid.17089.37Department of Psychiatry, University of Alberta, Edmonton, AB Canada
| | - James D. Boyd
- grid.17091.3e0000 0001 2288 9830Department of Psychiatry, University of British Columbia, Vancouver, BC Canada ,grid.17091.3e0000 0001 2288 9830Djavad Mowafaghian Brain Research Centre, University of British Columbia, Vancouver, BC Canada
| | - Paul D. Metzak
- grid.22072.350000 0004 1936 7697Department of Psychiatry, University of Calgary, Calgary, AB Canada ,grid.22072.350000 0004 1936 7697Hotchkiss Brain Institute & The Mathison Centre for Mental Health Research and Education, University of Calgary, Calgary, AB Canada
| | - Timothy H. Murphy
- grid.17091.3e0000 0001 2288 9830Department of Psychiatry, University of British Columbia, Vancouver, BC Canada ,grid.17091.3e0000 0001 2288 9830Djavad Mowafaghian Brain Research Centre, University of British Columbia, Vancouver, BC Canada
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33
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The Effects of Population Tuning and Trial-by-Trial Variability on Information Encoding and Behavior. J Neurosci 2019; 40:1066-1083. [PMID: 31754013 DOI: 10.1523/jneurosci.0859-19.2019] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 10/04/2019] [Accepted: 10/11/2019] [Indexed: 12/11/2022] Open
Abstract
Identifying the features of population responses that are relevant to the amount of information encoded by neuronal populations is a crucial step toward understanding population coding. Statistical features, such as tuning properties, individual and shared response variability, and global activity modulations, could all affect the amount of information encoded and modulate behavioral performance. We show that two features in particular affect information: the modulation of population responses across conditions (population signal) and the inverse population covariability along the modulation axis (projected precision). We demonstrate that fluctuations of these two quantities are correlated with fluctuations of behavioral performance in various tasks and brain regions consistently across 4 monkeys (1 female and 1 male Macaca mulatta; and 2 male Macaca fascicularis). In contrast, fluctuations in mean correlations among neurons and global activity have negligible or inconsistent effects on the amount of information encoded and behavioral performance. We also show that differential correlations reduce the amount of information encoded in finite populations by reducing projected precision. Our results are consistent with predictions of a model that optimally decodes population responses to produce behavior.SIGNIFICANCE STATEMENT The last two or three decades of research have seen hot debates about what features of population tuning and trial-by-trial variability influence the information carried by a population of neurons, with some camps arguing, for instance, that mean pairwise correlations or global fluctuations are important while other camps report opposite results. In this study, we identify the most important features of neural population responses that determine the amount of encoded information and behavioral performance by combining analytic calculations with a novel nonparametric method that allows us to isolate the effects of different statistical features. We tested our hypothesis on 4 macaques, three decision-making tasks, and two brain areas. The predictions of our theory were in agreement with the experimental data.
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34
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Mitelut CC, Spacek MA, Chan AW, Murphy TH, Swindale NV. LFP clustering in cortex reveals a taxonomy of Up states and near-millisecond, ordered phase-locking in cortical neurons. J Neurophysiol 2019; 122:1794-1809. [PMID: 31433725 DOI: 10.1152/jn.00456.2019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
During slow-wave sleep and anesthesia, mammalian cortex exhibits a synchronized state during which neurons shift from a largely nonfiring to a firing state, known as an Up-state transition. Up-state transitions may constitute the default activity pattern of the entire cortex (Neske GT. Front Neural Circuits 9: 88, 2016) and could be critical to understanding cortical function, yet the genesis of such transitions and their interaction with single neurons is not well understood. It was recently shown that neurons firing at rates >2 Hz fire spikes in a stereotyped order during Up-state transitions (Luczak A, McNaughton BL, Harris KD. Nat Rev Neurosci 16: 745-755, 2015), yet it is still unknown if Up states are homogeneous and whether spiking order is present in neurons with rates <2 Hz (the majority). Using extracellular recordings from anesthetized cats and mice and from naturally sleeping rats, we show for the first time that Up-state transitions can be classified into several types based on the shape of the local field potential (LFP) during each transition. Individual LFP events could be localized in time to within 1-4 ms, more than an order of magnitude less than in previous studies. The majority of recorded neurons synchronized their firing to within ±5-15 ms relative to each Up-state transition. Simultaneous electrophysiology and wide-field imaging in mouse confirmed that LFP event clusters are cortex-wide phenomena. Our findings show that Up states are of different types and point to the potential importance of temporal order and millisecond-scale signaling by cortical neurons.NEW & NOTEWORTHY During cortical Up-state transitions in sleep and anesthesia, neurons undergo brief periods of increased firing in an order similar to that occurring in awake states. We show that these transitions can be classified into distinct types based on the shape of the local field potential. Transition times can be defined to <5 ms. Most neurons synchronize their firing to within ±5-15 ms of the transitions and fire in a consistent order.
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Affiliation(s)
- Catalin C Mitelut
- Department of Statistics, Columbia University, New York, New York.,Department of Psychiatry, Kinsmen Laboratory of Neurological Research, University of British Columbia, Vancouver, British Columbia, Canada.,Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, British Columbia, Canada.,Department of Ophthalmology and Visual Sciences, University of British Columbia, Vancouver, British Columbia, Canada
| | - Martin A Spacek
- Department of Ophthalmology and Visual Sciences, University of British Columbia, Vancouver, British Columbia, Canada.,Department of Biology II, Division of Neurobiology, Ludwig-Maximilians-Universität München, Munich, Germany
| | - Allen W Chan
- Department of Psychiatry, University of Alberta, Edmonton, Alberta, Canada
| | - Tim H Murphy
- Department of Psychiatry, Kinsmen Laboratory of Neurological Research, University of British Columbia, Vancouver, British Columbia, Canada.,Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, British Columbia, Canada
| | - Nicholas V Swindale
- Department of Ophthalmology and Visual Sciences, University of British Columbia, Vancouver, British Columbia, Canada
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35
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Kazemipour A, Novak O, Flickinger D, Marvin JS, Abdelfattah AS, King J, Borden PM, Kim JJ, Al-Abdullatif SH, Deal PE, Miller EW, Schreiter ER, Druckmann S, Svoboda K, Looger LL, Podgorski K. Kilohertz frame-rate two-photon tomography. Nat Methods 2019; 16:778-786. [PMID: 31363222 PMCID: PMC6754705 DOI: 10.1038/s41592-019-0493-9] [Citation(s) in RCA: 84] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Accepted: 06/14/2019] [Indexed: 11/25/2022]
Abstract
Point-scanning two-photon microscopy enables high-resolution imaging within scattering specimens such as the mammalian brain, but sequential acquisition of voxels fundamentally limits its speed. We developed a two-photon imaging technique that scans lines of excitation across a focal plane at multiple angles and computationally recovers high-resolution images, attaining voxel rates of over 1 billion Hz in structured samples. Using a static image as a prior for recording neural activity, we imaged visually evoked and spontaneous glutamate release across hundreds of dendritic spines in mice at depths over 250 µm and frame rates over 1 kHz. Dendritic glutamate transients in anesthetized mice are synchronized within spatially contiguous domains spanning tens of micrometers at frequencies ranging from 1-100 Hz. We demonstrate millisecond-resolved recordings of acetylcholine and voltage indicators, three-dimensional single-particle tracking and imaging in densely labeled cortex. Our method surpasses limits on the speed of raster-scanned imaging imposed by fluorescence lifetime.
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Affiliation(s)
- Abbas Kazemipour
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - Ondrej Novak
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
- Second Medical Faculty, Charles University, Prague, Czech Republic
| | - Daniel Flickinger
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jonathan S Marvin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | | | - Philip M Borden
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Jeong Jun Kim
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | | | - Parker E Deal
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA
| | - Evan W Miller
- Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA
- Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA
- Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA, USA
| | - Eric R Schreiter
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Shaul Druckmann
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - Karel Svoboda
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Loren L Looger
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA
| | - Kaspar Podgorski
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.
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36
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Rapid and active stabilization of visual cortical firing rates across light-dark transitions. Proc Natl Acad Sci U S A 2019; 116:18068-18077. [PMID: 31366632 DOI: 10.1073/pnas.1906595116] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Abstract
The dynamics of neuronal firing during natural vision are poorly understood. Surprisingly, mean firing rates of neurons in primary visual cortex (V1) of freely behaving rodents are similar during prolonged periods of light and darkness, but it is unknown whether this reflects a slow adaptation to changes in natural visual input or insensitivity to rapid changes in visual drive. Here, we use chronic electrophysiology in freely behaving rats to follow individual V1 neurons across many dark-light (D-L) and light-dark (L-D) transitions. We show that, even on rapid timescales (1 s to 10 min), neuronal activity was only weakly modulated by transitions that coincided with the expected 12-/12-h L-D cycle. In contrast, a larger subset of V1 neurons consistently responded to unexpected L-D and D-L transitions, and disruption of the regular L-D cycle with 60 h of complete darkness induced a robust increase in V1 firing on reintroduction of visual input. Thus, V1 neurons fire at similar rates in the presence or absence of natural stimuli, and significant changes in activity arise only transiently in response to unexpected changes in the visual environment. Furthermore, although mean rates were similar in light and darkness, pairwise correlations were significantly stronger during natural vision, suggesting that information about natural scenes in V1 may be more strongly reflected in correlations than individual firing rates. Together, our findings show that V1 firing rates are rapidly and actively stabilized during expected changes in visual input and are remarkably stable at both short and long timescales.
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37
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Mogensen H, Norrlid J, Enander JMD, Wahlbom A, Jörntell H. Absence of Repetitive Correlation Patterns Between Pairs of Adjacent Neocortical Neurons in vivo. Front Neural Circuits 2019; 13:48. [PMID: 31379516 PMCID: PMC6658836 DOI: 10.3389/fncir.2019.00048] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Accepted: 07/05/2019] [Indexed: 11/13/2022] Open
Abstract
Neuroanatomy suggests that adjacent neocortical neurons share a similar set of afferent synaptic inputs, as opposed to neurons localized to different areas of the neocortex. In the present study, we made simultaneous single-electrode patch clamp recordings from two or three adjacent neurons in the primary somatosensory cortex (S1) of the ketamine-xylazine anesthetized rat in vivo to study the correlation patterns in their spike firing during both spontaneous and sensory-evoked activity. One difference with previous studies of pairwise neuronal spike firing correlations was that here we identified several different quantifiable parameters in the correlation patterns by which different pairs could be compared. The questions asked were if the correlation patterns between adjacent pairs were similar and if there was a relationship between the degree of similarity and the layer location of the pairs. In contrast, our results show that for putative pyramidal neurons within layer III and within layer V, each pair of neurons is to some extent unique in terms of their spiking correlation patterns. Interestingly, our results also indicated that these correlation patterns did not substantially alter between spontaneous and evoked activity. Our findings are compatible with the view that the synaptic input connectivity to each neocortical neuron is at least in some aspects unique. A possible interpretation is that plasticity mechanisms, which could either be initiating or be supported by transcriptomic differences, tend to differentiate rather than harmonize the synaptic weight distributions between adjacent neurons of the same type.
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Affiliation(s)
- Hannes Mogensen
- Neural Basis of Sensorimotor Control, Department of Experimental Medical Science, Faculty of Medicine, Lund University, Lund, Sweden
| | - Johanna Norrlid
- Neural Basis of Sensorimotor Control, Department of Experimental Medical Science, Faculty of Medicine, Lund University, Lund, Sweden
| | - Jonas M D Enander
- Neural Basis of Sensorimotor Control, Department of Experimental Medical Science, Faculty of Medicine, Lund University, Lund, Sweden
| | - Anders Wahlbom
- Neural Basis of Sensorimotor Control, Department of Experimental Medical Science, Faculty of Medicine, Lund University, Lund, Sweden
| | - Henrik Jörntell
- Neural Basis of Sensorimotor Control, Department of Experimental Medical Science, Faculty of Medicine, Lund University, Lund, Sweden
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Scheunemann L, Plaçais PY, Dromard Y, Schwärzel M, Preat T. Dunce Phosphodiesterase Acts as a Checkpoint for Drosophila Long-Term Memory in a Pair of Serotonergic Neurons. Neuron 2019; 98:350-365.e5. [PMID: 29673482 PMCID: PMC5919781 DOI: 10.1016/j.neuron.2018.03.032] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Revised: 12/19/2017] [Accepted: 03/16/2018] [Indexed: 01/08/2023]
Abstract
A key function of the brain is to filter essential information and store it in the form of stable, long-term memory (LTM). We demonstrate here that the Dunce (Dnc) phosphodiesterase, an important enzyme that degrades cAMP, acts as a molecular switch that controls LTM formation in Drosophila. We show that, during LTM formation, Dnc is inhibited in the SPN, a pair of newly characterized serotonergic neurons, which stimulates the cAMP/PKA pathway. As a consequence, the SPN activates downstream dopaminergic neurons, opening the gate for LTM formation in the olfactory memory center, the mushroom body. Strikingly, transient inhibition of Dnc in the SPN by RNAi was sufficient to induce LTM formation with a training protocol that normally generates only short-lived memory. Thus, Dnc activity in the SPN acts as a memory checkpoint to guarantee that only the most relevant learned experiences are consolidated into stable memory. Dunce phosphodiesterase is a default inhibitor of long-term memory (LTM) formation Dunce acts in a pair of newly identified serotonergic projection neurons These serotonergic neurons control the activity of LTM-gating dopaminergic neurons
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Affiliation(s)
- Lisa Scheunemann
- Genes and Dynamics of Memory Systems, Brain Plasticity Unit, ESPCI Paris, PSL Research University, CNRS, 10 rue Vauquelin, 75005 Paris, France
| | - Pierre-Yves Plaçais
- Genes and Dynamics of Memory Systems, Brain Plasticity Unit, ESPCI Paris, PSL Research University, CNRS, 10 rue Vauquelin, 75005 Paris, France
| | - Yann Dromard
- Genes and Dynamics of Memory Systems, Brain Plasticity Unit, ESPCI Paris, PSL Research University, CNRS, 10 rue Vauquelin, 75005 Paris, France
| | - Martin Schwärzel
- Freie Universität Berlin, Department of Biology/Neurobiology, Königin-Luise Str. 28-30, Berlin 14195, Germany
| | - Thomas Preat
- Genes and Dynamics of Memory Systems, Brain Plasticity Unit, ESPCI Paris, PSL Research University, CNRS, 10 rue Vauquelin, 75005 Paris, France.
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Voss LJ, García PS, Hentschke H, Banks MI. Understanding the Effects of General Anesthetics on Cortical Network Activity Using Ex Vivo Preparations. Anesthesiology 2019; 130:1049-1063. [PMID: 30694851 PMCID: PMC6520142 DOI: 10.1097/aln.0000000000002554] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
General anesthetics have been used to ablate consciousness during surgery for more than 150 yr. Despite significant advances in our understanding of their molecular-level pharmacologic effects, comparatively little is known about how anesthetics alter brain dynamics to cause unconsciousness. Consequently, while anesthesia practice is now routine and safe, there are many vagaries that remain unexplained. In this paper, the authors review the evidence that cortical network activity is particularly sensitive to general anesthetics, and suggest that disruption to communication in, and/or among, cortical brain regions is a common mechanism of anesthesia that ultimately produces loss of consciousness. The authors review data from acute brain slices and organotypic cultures showing that anesthetics with differing molecular mechanisms of action share in common the ability to impair neurophysiologic communication. While many questions remain, together, ex vivo and in vivo investigations suggest that a unified understanding of both clinical anesthesia and the neural basis of consciousness is attainable.
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Affiliation(s)
- Logan J Voss
- From the Department of Anaesthesia, Waikato District Health Board, Hamilton, New Zealand (L.J.V.) the Department of Anesthesiology, Emory University School of Medicine, Atlanta, Georgia (P.S.G) Anesthesiology and Research Divisions, Atlanta Veterans Administration Medical Center, Atlanta, Georgia (P.S.G.) the Experimental Anesthesiology Section, Department of Anesthesiology, University Hospital of Tübingen, Tübingen, Germany (H.H.) rthe Department of Anesthesiology, University of Wisconsin, Madison, Wisconsin (M.I.B.)
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40
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Moyal R, Edelman S. Dynamic Computation in Visual Thalamocortical Networks. ENTROPY (BASEL, SWITZERLAND) 2019; 21:E500. [PMID: 33267214 PMCID: PMC7514988 DOI: 10.3390/e21050500] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 03/13/2019] [Revised: 05/10/2019] [Accepted: 05/14/2019] [Indexed: 02/06/2023]
Abstract
Contemporary neurodynamical frameworks, such as coordination dynamics and winnerless competition, posit that the brain approximates symbolic computation by transitioning between metastable attractive states. This article integrates these accounts with electrophysiological data suggesting that coherent, nested oscillations facilitate information representation and transmission in thalamocortical networks. We review the relationship between criticality, metastability, and representational capacity, outline existing methods for detecting metastable oscillatory patterns in neural time series data, and evaluate plausible spatiotemporal coding schemes based on phase alignment. We then survey the circuitry and the mechanisms underlying the generation of coordinated alpha and gamma rhythms in the primate visual system, with particular emphasis on the pulvinar and its role in biasing visual attention and awareness. To conclude the review, we begin to integrate this perspective with longstanding theories of consciousness and cognition.
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Affiliation(s)
- Roy Moyal
- Department of Psychology, Cornell University, Ithaca, NY 14853, USA
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41
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Krause BM, Murphy CA, Uhlrich DJ, Banks MI. PV+ Cells Enhance Temporal Population Codes but not Stimulus-Related Timing in Auditory Cortex. Cereb Cortex 2019; 29:627-647. [PMID: 29300837 PMCID: PMC6319178 DOI: 10.1093/cercor/bhx345] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2017] [Revised: 11/30/2017] [Accepted: 12/05/2017] [Indexed: 01/05/2023] Open
Abstract
Spatio-temporal cortical activity patterns relative to both peripheral input and local network activity carry information about stimulus identity and context. GABAergic interneurons are reported to regulate spiking at millisecond precision in response to sensory stimulation and during gamma oscillations; their role in regulating spike timing during induced network bursts is unclear. We investigated this issue in murine auditory thalamo-cortical (TC) brain slices, in which TC afferents induced network bursts similar to previous reports in vivo. Spike timing relative to TC afferent stimulation during bursts was poor in pyramidal cells and SOM+ interneurons. It was more precise in PV+ interneurons, consistent with their reported contribution to spiking precision in pyramidal cells. Optogenetic suppression of PV+ cells unexpectedly improved afferent-locked spike timing in pyramidal cells. In contrast, our evidence suggests that PV+ cells do regulate the spatio-temporal spike pattern of pyramidal cells during network bursts, whose organization is suited to ensemble coding of stimulus information. Simulations showed that suppressing PV+ cells reduces the capacity of pyramidal cell networks to produce discriminable spike patterns. By dissociating temporal precision with respect to a stimulus versus internal cortical activity, we identified a novel role for GABAergic cells in regulating information processing in cortical networks.
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Affiliation(s)
- Bryan M Krause
- Department of Anesthesiology, University of Wisconsin, Madison, WI, USA
- Neuroscience Training Program, University of Wisconsin, Madison, WI, USA
| | - Caitlin A Murphy
- Physiology Graduate Training Program, University of Wisconsin, Madison, WI, USA
| | - Daniel J Uhlrich
- Department of Neuroscience, University of Wisconsin, Madison, WI, USA
| | - Matthew I Banks
- Department of Anesthesiology, University of Wisconsin, Madison, WI, USA
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42
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Hentschke H, Raz A, Krause BM, Murphy CA, Banks MI. Disruption of cortical network activity by the general anaesthetic isoflurane. Br J Anaesth 2019; 119:685-696. [PMID: 29121295 DOI: 10.1093/bja/aex199] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/02/2017] [Indexed: 02/03/2023] Open
Abstract
Background Actions of general anaesthetics on activity in the cortico-thalamic network likely contribute to loss of consciousness and disconnection from the environment. Previously, we showed that the general anaesthetic isoflurane preferentially suppresses cortically evoked synaptic responses compared with thalamically evoked synaptic responses, but how this differential sensitivity translates into changes in network activity is unclear. Methods We investigated isoflurane disruption of spontaneous and stimulus-induced cortical network activity using multichannel recordings in murine auditory thalamo-cortical brain slices. Results Under control conditions, afferent stimulation elicited short latency, presumably monosynaptically driven, spiking responses, as well as long latency network bursts that propagated horizontally through the cortex. Isoflurane (0.05-0.6 mM) suppressed spiking activity overall, but had a far greater effect on network bursts than on early spiking responses. At isoflurane concentrations >0.3 mM, network bursts were almost entirely blocked, even with increased stimulation intensity and in response to paired (thalamo-cortical + cortical layer 1) stimulation, while early spiking responses were <50% blocked. Isoflurane increased the threshold for eliciting bursts, decreased their propagation speed and prevented layer 1 afferents from facilitating burst induction by thalamo-cortical afferents. Conclusions Disruption of horizontal activity spread and of layer 1 facilitation of thalamo-cortical responses likely contribute to the mechanism by which suppression of cortical feedback connections disrupts sensory awareness under anaesthesia.
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Affiliation(s)
- H Hentschke
- Department of Anesthesiology, Experimental Anesthesiology Section, University Hospital of Tübingen, Tübingen, Germany
| | - A Raz
- Department of Anesthesiology, University of Wisconsin, Madison, WI, USA.,Department of Anesthesiology, Rambam Health Care Campus, Haifa, Israel
| | - B M Krause
- Department of Anesthesiology, University of Wisconsin, Madison, WI, USA
| | - C A Murphy
- Department of Anesthesiology, University of Wisconsin, Madison, WI, USA.,Physiology Graduate Training Program, University of Wisconsin, Madison, WI, USA
| | - M I Banks
- Department of Anesthesiology, University of Wisconsin, Madison, WI, USA
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43
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Schjetnan AGP, Gidyk DC, Metz GA, Luczak A. Anodal transcranial direct current stimulation with monopolar pulses improves limb use after stroke by enhancing inter-hemispheric coherence. Acta Neurobiol Exp (Wars) 2019. [DOI: 10.21307/ane-2019-027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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44
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Gardella C, Marre O, Mora T. Modeling the Correlated Activity of Neural Populations: A Review. Neural Comput 2018; 31:233-269. [PMID: 30576613 DOI: 10.1162/neco_a_01154] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
The principles of neural encoding and computations are inherently collective and usually involve large populations of interacting neurons with highly correlated activities. While theories of neural function have long recognized the importance of collective effects in populations of neurons, only in the past two decades has it become possible to record from many cells simultaneously using advanced experimental techniques with single-spike resolution and to relate these correlations to function and behavior. This review focuses on the modeling and inference approaches that have been recently developed to describe the correlated spiking activity of populations of neurons. We cover a variety of models describing correlations between pairs of neurons, as well as between larger groups, synchronous or delayed in time, with or without the explicit influence of the stimulus, and including or not latent variables. We discuss the advantages and drawbacks or each method, as well as the computational challenges related to their application to recordings of ever larger populations.
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Affiliation(s)
- Christophe Gardella
- Laboratoire de physique statistique, CNRS, Sorbonne Université, Université Paris-Diderot, and École normale supérieure, 75005 Paris, France, and Institut de la Vision, INSERM, CNRS, and Sorbonne Université, 75012 Paris, France
| | - Olivier Marre
- Institut de la Vision, INSERM, CNRS, and Sorbonne Université, 75012 Paris, France
| | - Thierry Mora
- Laboratoire de physique statistique, CNRS, Sorbonne Université, Université Paris-Diderot, and École normale supérieure, 75005 Paris, France
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45
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Kwon SE. The Interplay Between Cortical State and Perceptual Learning: A Focused Review. Front Syst Neurosci 2018; 12:47. [PMID: 30356685 PMCID: PMC6189309 DOI: 10.3389/fnsys.2018.00047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Accepted: 09/24/2018] [Indexed: 11/13/2022] Open
Abstract
Measurements of population activity in alert animals have demonstrated that the intrinsic response state of the cortex has profound effects on the neuronal representation of sensory inputs, raising the possibility that cortical state could influence the behavioral performance in perceptual learning (PL). PL is a process by which sensory experience leads to gradual and semi-permanent improvements in perceptual judgment, and it is generally agreed that these improvements are modulated by sensory cortical areas. Although the precise neural mechanisms underlying the improved perceptual judgment remain unclear, cortical state has been shown to impact the behavioral outcome of PL. We discuss several ways in which cortical state might influence PL based on the recent evidence for state-dependent modulation of sensory encoding. Conversely, training in a certain perceptual task feeds back to modulate cortical state, suggesting a bi-directional relationship between cortical state and behavioral outcomes of PL. We highlight the recent studies that shed light on the mechanism of the interplay between cortical state and PL.
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Affiliation(s)
- Sung Eun Kwon
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI, United States
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46
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Li M, Xie K, Kuang H, Liu J, Wang D, Fox GE, Shi Z, Chen L, Zhao F, Mao Y, Tsien JZ. Neural Coding of Cell Assemblies via Spike-Timing Self-Information. Cereb Cortex 2018; 28:2563-2576. [PMID: 29688285 PMCID: PMC5998964 DOI: 10.1093/cercor/bhy081] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2018] [Indexed: 12/31/2022] Open
Abstract
Cracking brain's neural code is of general interest. In contrast to the traditional view that enormous spike variability in resting states and stimulus-triggered responses reflects noise, here, we examine the "Neural Self-Information Theory" that the interspike-interval (ISI), or the silence-duration between 2 adjoining spikes, carries self-information that is inversely proportional to its variability-probability. Specifically, higher-probability ISIs convey minimal information because they reflect the ground state, whereas lower-probability ISIs carry more information, in the form of "positive" or "negative surprisals," signifying the excitatory or inhibitory shifts from the ground state, respectively. These surprisals serve as the quanta of information to construct temporally coordinated cell-assembly ternary codes representing real-time cognitions. Accordingly, we devised a general decoding method and unbiasedly uncovered 15 cell assemblies underlying different sleep cycles, fear-memory experiences, spatial navigation, and 5-choice serial-reaction time (5CSRT) visual-discrimination behaviors. We further revealed that robust cell-assembly codes were generated by ISI surprisals constituted of ~20% of the skewed ISI gamma-distribution tails, conforming to the "Pareto Principle" that specifies, for many events-including communication-roughly 80% of the output or consequences come from 20% of the input or causes. These results demonstrate that real-time neural coding arises from the temporal assembly of neural-clique members via silence variability-based self-information codes.
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Affiliation(s)
- Meng Li
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Kun Xie
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
- The Brain Decoding Center, Banna Biomedical Research Institute, Yunnan Province Academy of Science and Technology, Xi-Shuang-Ban-Na Prefecture, Yunnan, China
| | - Hui Kuang
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Jun Liu
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Deheng Wang
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
- The Brain Decoding Center, Banna Biomedical Research Institute, Yunnan Province Academy of Science and Technology, Xi-Shuang-Ban-Na Prefecture, Yunnan, China
| | - Grace E Fox
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
| | - Zhifeng Shi
- Department of Neuropathology, Huashan Hospital, Fudan University, Shanghai, China
| | - Liang Chen
- Department of Neuropathology, Huashan Hospital, Fudan University, Shanghai, China
| | - Fang Zhao
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
- The Brain Decoding Center, Banna Biomedical Research Institute, Yunnan Province Academy of Science and Technology, Xi-Shuang-Ban-Na Prefecture, Yunnan, China
| | - Ying Mao
- Department of Neuropathology, Huashan Hospital, Fudan University, Shanghai, China
| | - Joe Z Tsien
- Brain and Behavior Discovery Institute and Department of Neurology, Medical College of Georgia at Augusta University, Augusta, GA, USA
- The Brain Decoding Center, Banna Biomedical Research Institute, Yunnan Province Academy of Science and Technology, Xi-Shuang-Ban-Na Prefecture, Yunnan, China
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47
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Go/No-Go task engagement enhances population representation of target stimuli in primary auditory cortex. Nat Commun 2018; 9:2529. [PMID: 29955046 PMCID: PMC6023878 DOI: 10.1038/s41467-018-04839-9] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2018] [Accepted: 05/22/2018] [Indexed: 11/09/2022] Open
Abstract
Primary sensory cortices are classically considered to extract and represent stimulus features, while association and higher-order areas are thought to carry information about stimulus meaning. Here we show that this information can in fact be found in the neuronal population code of the primary auditory cortex (A1). A1 activity was recorded in awake ferrets while they either passively listened or actively discriminated stimuli in a range of Go/No-Go paradigms, with different sounds and reinforcements. Population-level dimensionality reduction techniques reveal that task engagement induces a shift in stimulus encoding from a sensory to a behaviorally driven representation that specifically enhances the target stimulus in all paradigms. This shift partly relies on task-engagement-induced changes in spontaneous activity. Altogether, we show that A1 population activity bears strong similarities to frontal cortex responses. These findings indicate that primary sensory cortices implement a crucial change in the structure of population activity to extract task-relevant information during behavior. Sensory areas are thought to process stimulus information while higher-order processing occurs in association cortices. Here the authors report that during task engagement population activity in ferret primary auditory cortex shifts away from encoding stimulus features toward detection of the behaviourally relevant targets.
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48
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Hadders-Algra M. Early human brain development: Starring the subplate. Neurosci Biobehav Rev 2018; 92:276-290. [PMID: 29935204 DOI: 10.1016/j.neubiorev.2018.06.017] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Revised: 06/15/2018] [Accepted: 06/19/2018] [Indexed: 12/16/2022]
Abstract
This review summarizes early human brain development on the basis of neuroanatomical data and functional connectomics. It indicates that the most significant changes in the brain occur during the second half of gestation and the first three months post-term, in particular in the cortical subplate and cerebellum. As the transient subplate pairs a high rate of intricate developmental changes and interactions with clear functional activity, two phases of development are distinguished: a) the transient cortical subplate phase, ending at 3 months post-term when the permanent circuitries in the primary motor, somatosensory and visual cortices have replaced the subplate; and subsequently, b) the phase in which the permanent circuitries dominate. In the association areas the subplate dissolves in the remainder of the first postnatal year. During both phases developmental changes are paralleled by continuous reconfigurations in network activity. The reviewed literature also suggests that disruption of subplate development may play a pivotal role in developmental disorders, such as cerebral palsy, autism spectrum disorders, attention deficit hyperactivity disorder and schizophrenia.
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Affiliation(s)
- Mijna Hadders-Algra
- University of Groningen, University Medical Center Groningen, Dept. Pediatrics - Section Developmental Neurology, Hanzeplein 1, 9713 GZ, Groningen, The Netherlands.
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49
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Utashiro N, Williams CR, Parrish JZ, Emoto K. Prior activity of olfactory receptor neurons is required for proper sensory processing and behavior in Drosophila larvae. Sci Rep 2018; 8:8580. [PMID: 29872087 PMCID: PMC5988719 DOI: 10.1038/s41598-018-26825-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Accepted: 05/14/2018] [Indexed: 11/10/2022] Open
Abstract
Animal responses to their environment rely on activation of sensory neurons by external stimuli. In many sensory systems, however, neurons display basal activity prior to the external stimuli. This prior activity is thought to modulate neural functions, yet its impact on animal behavior remains elusive. Here, we reveal a potential role for prior activity in olfactory receptor neurons (ORNs) in shaping larval olfactory behavior. We show that prior activity in larval ORNs is mediated by the olfactory receptor complex (OR complex). Mutations of Orco, an odorant co-receptor required for OR complex function, cause reduced attractive behavior in response to optogenetic activation of ORNs. Calcium imaging reveals that Orco mutant ORNs fully respond to optogenetic stimulation but exhibit altered temporal patterns of neural responses. These findings together suggest a critical role for prior activity in information processing upon ORN activation in Drosophila larvae, which in turn contributes to olfactory behavior control.
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Affiliation(s)
- Nao Utashiro
- Department of Biological Sciences, School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Claire R Williams
- Department of Biology, University of Washington, 24 Kincaid Hall, Box 351800, Seattle, WA, 98195, USA.,Molecular and Cellular Biology Program, University of Washington, Seattle, WA, 98195, USA
| | - Jay Z Parrish
- Department of Biology, University of Washington, 24 Kincaid Hall, Box 351800, Seattle, WA, 98195, USA.,Molecular and Cellular Biology Program, University of Washington, Seattle, WA, 98195, USA
| | - Kazuo Emoto
- Department of Biological Sciences, School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan. .,International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan.
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50
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Wenzel M, Hamm JP, Peterka DS, Yuste R. Reliable and Elastic Propagation of Cortical Seizures In Vivo. Cell Rep 2018; 19:2681-2693. [PMID: 28658617 DOI: 10.1016/j.celrep.2017.05.090] [Citation(s) in RCA: 75] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2016] [Revised: 05/15/2017] [Accepted: 05/28/2017] [Indexed: 12/27/2022] Open
Abstract
Mapping the fine-scale neural activity that underlies epilepsy is key to identifying potential control targets of this frequently intractable disease. Yet, the detailed in vivo dynamics of seizure progression in cortical microcircuits remain poorly understood. We combine fast (30-Hz) two-photon calcium imaging with local field potential (LFP) recordings to map, cell by cell, the spread of locally induced (4-AP or picrotoxin) seizures in anesthetized and awake mice. Using single-layer and microprism-assisted multilayer imaging in different cortical areas, we uncover reliable recruitment of local neural populations within and across cortical layers, and we find layer-specific temporal delays, suggesting an initial supra-granular invasion followed by deep-layer recruitment during lateral seizure spread. Intriguingly, despite consistent progression pathways, successive seizures show pronounced temporal variability that critically depends on GABAergic inhibition. We propose an epilepsy circuit model resembling an elastic meshwork, wherein ictal progression faithfully follows preexistent pathways but varies flexibly in time, depending on the local inhibitory restraint.
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Affiliation(s)
- Michael Wenzel
- Neurotechnology Center, Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
| | - Jordan P Hamm
- Neurotechnology Center, Department of Biological Sciences, Columbia University, New York, NY 10027, USA
| | - Darcy S Peterka
- Neurotechnology Center, Department of Biological Sciences, Columbia University, New York, NY 10027, USA
| | - Rafael Yuste
- Neurotechnology Center, Department of Biological Sciences, Columbia University, New York, NY 10027, USA
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