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Zeiss R, Briones MJI, Mathieu J, Lomba A, Dahlke J, Heptner LF, Salako G, Eisenhauer N, Guerra CA. Effects of climate on the distribution and conservation of commonly observed European earthworms. Conserv Biol 2024; 38:e14187. [PMID: 37768192 DOI: 10.1111/cobi.14187] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2023] [Revised: 08/21/2023] [Accepted: 09/07/2023] [Indexed: 09/29/2023]
Abstract
Belowground biodiversity distribution does not necessarily reflect aboveground biodiversity patterns, but maps of soil biodiversity remain scarce because of limited data availability. Earthworms belong to the most thoroughly studied soil organisms and-in their role as ecosystem engineers-have a significant impact on ecosystem functioning. We used species distribution modeling (SDMs) and available data sets to map the spatial distribution of commonly observed (i.e., frequently recorded) earthworm species (Annelida, Oligochaeta) across Europe under current and future climate conditions. First, we predicted potential species distributions with commonly used models (i.e., MaxEnt and Biomod) and estimated total species richness (i.e., number of species in a 5 × 5 km grid cell). Second, we determined how much the different types of protected areas covered predicted earthworm richness and species ranges (i.e., distributions) by estimating the respective proportion of the range area. Earthworm species richness was high in central western Europe and low in northeastern Europe. This pattern was mainly associated with annual mean temperature and precipitation seasonality, but the importance of predictor variables to species occurrences varied among species. The geographical ranges of the majority of the earthworm species were predicted to shift to eastern Europe and partly decrease under future climate scenarios. Predicted current and future ranges were only poorly covered by protected areas, such as national parks. More than 80% of future earthworm ranges were on average not protected at all (mean [SD] = 82.6% [0.04]). Overall, our results emphasize the urgency of considering especially vulnerable earthworm species, as well as other soil organisms, in the design of nature conservation measures.
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Affiliation(s)
- Romy Zeiss
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Leipzig University, Leipzig, Germany
| | - Maria J I Briones
- Departamento de Ecologia y Biologia Animal, Universidade de Vigo, Vigo, Spain
| | - Jérome Mathieu
- Sorbonne Université, CNRS, IRD, INRAE, Université Paris Est Créteil, Université de Paris Cité, Institute of Ecology and Environmental Sciences of Paris (iEES-Paris), Paris, France
| | - Angela Lomba
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, Vairão, Portugal
- Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, Porto, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, Vairão, Portugal
| | - Jessica Dahlke
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Martin Luther University Halle-Wittenberg (MLU), Naturwissenschaftliche Fakultät 1, Halle (Saale), Germany
| | - Laura-Fiona Heptner
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Leipzig University, Leipzig, Germany
| | - Gabriel Salako
- Soil Zoology Division, Senckenberg Museum of Natural History, Görlitz, Germany
- Department of Environmental Management and Toxicology, Kwara State University, Malete, Nigeria
| | - Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Leipzig University, Leipzig, Germany
| | - Carlos A Guerra
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Leipzig University, Leipzig, Germany
- Martin Luther University Halle-Wittenberg (MLU), Naturwissenschaftliche Fakultät 1, Halle (Saale), Germany
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Schoffer JT, Solari F, Petit-Dit-Grézériat L, Pelosi C, Ginocchio R, Yáñez C, Mazuela P, Neaman A. The downside of copper pesticides: An earthworm's perspective. Environ Sci Pollut Res Int 2024; 31:16076-16084. [PMID: 38240972 DOI: 10.1007/s11356-024-32078-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Accepted: 01/15/2024] [Indexed: 01/31/2024]
Abstract
The widespread use of copper-based pesticides, while effective in controlling plant diseases, has been identified as a major source of copper contamination in soils. This raises concerns about potential adverse effects on earthworms, key players in soil health and ecosystem function. To inform sustainable pesticide practices, this study aimed to establish copper toxicity thresholds for earthworm avoidance in agricultural soils impacted by copper-based pesticides. We collected 40 topsoil samples (0-5 cm) from orchards and vineyards in the O'Higgins Region of central Chile, and 10 additional soils under native vegetation as background references. A standardized avoidance bioassay using Eisenia fetida assessed the impact of copper-based pesticides on the soils. Total copper concentrations ranged between 23 and 566 mg kg-1, with observed toxic effects on earthworms in certain soils. The effective concentration at 50% (EC50) for total soil copper, determined by Eisenia fetida's avoidance response, was 240 mg kg-1, with a 95% confidence interval of 193-341 mg kg-1. We further compared our EC50 values with existing data from agricultural soils impacted by mining activities. Interestingly, the results revealed a remarkable similarity between the thresholds for earthworm avoidance, regardless of the source of copper contamination. This observation underscores the universality of copper toxicity in agricultural ecosystems and its potential impact on soil biota. This study provides novel insights into copper toxicity thresholds for earthworms in real-world, pesticide-contaminated soils.
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Affiliation(s)
- Jorge Tomás Schoffer
- Center of Applied Ecology and Sustainability (CAPES), Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Fiama Solari
- Center of Applied Ecology and Sustainability (CAPES), Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Lucas Petit-Dit-Grézériat
- INRAE, Avignon Université, UMR EMMAH, Avignon, France
- Avignon Université, IMBE, Pôle Agroscience, Avignon, France
| | - Céline Pelosi
- INRAE, Avignon Université, UMR EMMAH, Avignon, France
| | - Rosanna Ginocchio
- Center of Applied Ecology and Sustainability (CAPES), Pontificia Universidad Católica de Chile, Santiago, Chile
- Departamento de Ecosistemas y Medio Ambiente, Facultad de Agronomía y Sistemas Naturales, Pontificia Universidad Católica de Chile, Santiago, Chile
| | - Carolina Yáñez
- Instituto de Biología, Pontificia Universidad Católica de Valparaíso, Valparaíso, Chile
| | - Pilar Mazuela
- Facultad de Ciencias Agronómicas, Universidad de Tarapacá, Arica, Chile
| | - Alexander Neaman
- Facultad de Ciencias Agronómicas, Universidad de Tarapacá, Arica, Chile.
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Jonsson H, Olofsson J, Blume-Werry G, Klaminder J. Cascading effects of earthworm invasion increase graminoid density and rodent grazing intensities. Ecology 2024; 105:e4212. [PMID: 37996966 DOI: 10.1002/ecy.4212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 08/30/2023] [Accepted: 10/19/2023] [Indexed: 11/25/2023]
Abstract
Human-mediated dispersal of non-native earthworms can cause substantial changes to the functioning and composition of ecosystems previously earthworm-free. Some of these earthworm species have the potential to "geoengineer" soils and increase plant nitrogen (N) uptake. Yet the possible consequences of increased plant N concentrations on rodent grazing remains poorly understood. In this study, we present findings from a common garden experiment with two tundra communities, meadow (forb dominated) and heath (shrub dominated), half of them subjected to 4 years of earthworm presence (Lumbricus spp. and Aporrectodea spp.). Within four summers, our earthworm treatment changed plant community composition by increasing graminoid density by, on average, 94% in the heath vegetation and by 49% in the meadow. Rodent winter grazing was more intense on plants growing in soils with earthworms, an effect that coincided with higher N concentrations in plants, indicating a higher palatability. Even though earthworms reduced soil moisture, plant community productivity, as indicated by vegetation greenness (normalized difference vegetation index), was not negatively impacted. We conclude that earthworm-induced changes in plant composition and trophic interactions may fundamentally alter the functioning of tundra ecosystems.
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Affiliation(s)
- Hanna Jonsson
- Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
| | - Johan Olofsson
- Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
| | - Gesche Blume-Werry
- Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
| | - Jonatan Klaminder
- Department of Ecology and Environmental Sciences, Umeå University, Umeå, Sweden
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Csuzdi C, Koo J, Choi NJ, Szederjesi T, Hong Y. Complete mitochondrial genome of the composting worm Dendrobaena veneta (Clitellata: Oligochaeta, Lumbricidae). Mitochondrial DNA B Resour 2023; 8:1082-1086. [PMID: 37849654 PMCID: PMC10578090 DOI: 10.1080/23802359.2023.2265177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2023] [Accepted: 09/26/2023] [Indexed: 10/19/2023] Open
Abstract
Dendrobaena veneta (Rosa, 1886) is widely distributed all over Europe due to its use as compost worm. The specimen presented here was collected in Tiranë district, Albania. Currently, only two species' complete or nearly complete mitochondrial genome (mitogenome) sequences have been reported in the genus Dendrobaena; D. octaedra (Savigny, 1826) and D. tellermanica Perel, 1966. In this study, the complete mitogenome of D. veneta was sequenced, assembled, and annotated. The mitogenome of D. veneta is a circular DNA molecule, consisting of 15,475 bp with an A + T content of 61.2%. It contains 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and 1 non-coding region (control region). Phylogenetic analysis showed that D. veneta is clustered with the other two Dendrobaena species in the well-supported family Lumbricidae.
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Affiliation(s)
- Csaba Csuzdi
- Department of Zoology, Eszterházy Károly Catholic University, Eger, Hungary
| | - Jachoon Koo
- Division of Science Education and Institute of Fusion Science, College of Education, Jeonbuk National University, Jeonju, Korea
| | - Nak jung Choi
- Crop Foundation Research Division, National Institute of Crop Science, Korea
| | - Tímea Szederjesi
- Department of Systematic Zoology, Eötvös Loránd University, Budapest, Hungary
| | - Yong Hong
- Department of Agricultural Biology, College of Agriculture and Life Sciences, Jeonbuk National University, Jeonju, Korea
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Shekhovtsov SV, Vasiliev GV, Latif R, Poluboyarova TV, Peltek SE, Rapoport IB. The mitochondrial genome of Dendrobaena tellermanica Perel, 1966 (Annelida: Lumbricidae) and its phylogenetic position. Vavilovskii Zhurnal Genet Selektsii 2023; 27:146-152. [PMID: 37063518 PMCID: PMC10090101 DOI: 10.18699/vjgb-23-20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 09/30/2022] [Accepted: 09/30/2022] [Indexed: 04/18/2023] Open
Abstract
Earthworms are an important ecological group that has a significant impact on soil fauna as well as plant communities. Despite their importance, genetic diversity and phylogeny of earthworms are still insufficiently studied. Most studies on earthworm genetic diversity are currently based on a few mitochondrial and nuclear genes. Mitochondrial genomes are becoming a promising target for phylogeny reconstruction in earthworms. However, most studies on earthworm mitochondrial genomes were made on West European and East Asian species, with much less sampling from other regions. In this study, we performed sequencing, assembly, and analysis of the mitochondrial genome of Dendrobaena tellermanica Perel, 1966 from the Northern Caucasus. This species was earlier included into D. schmidti (Michaelsen, 1907), a polytypic species with many subspecies. The genome was assembled as a single contig 15,298 bp long which contained a typical gene set: 13 protein-coding genes (three subunits of cytochrome c oxidase, seven subunits of NADH dehydrogenase, two subunits of ATP synthetase, and cytochrome b), 12S and 16S ribosomal RNA genes, and 22 tRNA genes. All genes were located on one DNA strand. The assembled part of the control region, located between the tRNA-Arg and tRNA-His genes, was 727 bp long. The control region contained multiple hairpins, as well as tandem repeats of the AACGCTT monomer. Phylogenetic analysis based on the complete mitochondrial genomes indicated that the genus Dendrobaena occupied the basal position within Lumbricidae. D. tellermanica was a rather distant relative of the cosmopolitan D. octaedra, suggesting high genetic diversity in this genus. D. schmidti turned out to be paraphyletic with respect to D. tellermanica. Since D. schmidti is known to contain very high genetic diversity, these results may indicate that it may be split into several species.
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Affiliation(s)
- S V Shekhovtsov
- Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia Institute of Biological Problems of the North of the Far Eastern Branch of the Russian Academy of Sciences, Magadan, Russia
| | - G V Vasiliev
- Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
| | - R Latif
- Semnan University, Semnan, Iran
| | - T V Poluboyarova
- Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
| | - S E Peltek
- Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
| | - I B Rapoport
- Tembotov Institute of Ecology of Mountain Territories of Russian Academy of Sciences, Nalchik, Russia
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Jänsch S, Braaker S, Römbke J, Staab F, Pamminger T. Holistic evaluation of long-term earthworm field studies with a fungicide. Integr Environ Assess Manag 2022; 18:1399-1413. [PMID: 34861099 PMCID: PMC9543917 DOI: 10.1002/ieam.4562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 09/28/2021] [Accepted: 11/29/2021] [Indexed: 06/13/2023]
Abstract
Plant protection products to be placed on the market in the European Union need to meet rigorous safety criteria including the testing of lumbricid earthworms, the functionally most important soil organism group in Central European agricultural ecosystems. To address uncertainties and investigate the potential long-term in-crop effects of the fungicide Cantus® containing 50% boscalid as an active substance, a series of standardized earthworm field studies with an overall duration of 5 years per study program was carried out in four German agricultural fields under realistic crop rotation conditions. A two-step approach was chosen to analyze the potential overall long-term effects on earthworms in agricultural fields: (i) an assessment of the earthworm abundance development in the course of the four study programs in relation to the determined actual content of boscalid in soil and (ii) an effect size meta-analysis of earthworm abundance 1 year after treatment for each consecutive year and study program. Measured boscalid concentrations in the soil after multiple applications were well above the maximum boscalid residues observed in agricultural soils across Central Europe. There were isolated statistically significant reductions of earthworm abundance for some species and groups at some time points during the studies, but no consistent relationship to the Cantus® treatments was observed. These results were supported by the meta-analysis, indicating no adverse effects on earthworm populations. Therefore, fluctuations of abundance reflect the natural variation of the populations rather than a concentration-related response. Based on this comprehensive analysis, we conclude that there is no application rate-related effect of the 5-year use of Cantus® on the development of the earthworm communities. The four study programs, paired with a comprehensive evaluation, directly address the concerns about the potential long-term effects of boscalid on earthworms in the field and suggest that multiyear applications do not adversely affect earthworm populations. Integr Environ Assess Manag 2022;18:1399-1413. © 2021 ECT Oekotoxikologie GmbH and BASF SE. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC).
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Affiliation(s)
| | | | | | | | - Tobias Pamminger
- BASF SELudwigshafenGermany
- Current affiliation: Bayer CropScienceMonheim am RheinGermany
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Hussain M, Liaqat I, Ali S, Aftab N, Ulfat M, Naseem S, Urooj, Qamar MF. Diversity and Abundance of Delineated Earthworm (Annelida: Clitellata) in Pakistan: A Review. J Oleo Sci 2022; 71:839-834. [PMID: 35661065 DOI: 10.5650/jos.ess22018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Earthworm, a ubiquitous (but neglected) macro-invertebrate, is found in terrestrial vicinity of Pakistan. Moreover, the occurrence of earthworms is often diverse with fluctuating quantity depending upon abiotic factors and land usage patterns. The aim of this study was to summarize all the reported information related to earthworm diversity in different areas of Pakistan. Almost all the data published from year 2001 to 2021 were collected. Following data organization, total 42 earthworm's species including five families (Acanthodrilidae, Lumbricidae, Moniligastridae, Octochaetidae and Megascolecidae) were reported from various researchers. Among five families, family Acanthodrilidae was found to have only one specie (Ramiella bishambari), Lumbricidae consist of 10 species (Apporactodea rosea, Allolobophora trapezoids, Allolobophora chloroticaa, Aporrectodea longa, A. caliginosa, Bimastus parvus, Eisenia fetida, Helodrilus foetidus, Lumbricus terrestris and L. rubillus), Moniligastridae has two species (Drawida nepalensis and D. pellucida) while Octochaetidae possess only one specie (Eutyphoeus incommodus). The most abundant and diverse family Megascolecidae consist of 28 earthworm species in all habitats of different regions of Pakistan. Among geographical areas, Faisalabad was found as the richest territory with most reported earthworm species (i.e. 28). The current study suggests further in depth research to explore the unidentified and/ missing species of earthworms in Pakistan.
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Affiliation(s)
- Mudassar Hussain
- Microbiology Lab, Department of Zoology, Government College University Lahore
| | - Iram Liaqat
- Microbiology Lab, Department of Zoology, Government College University Lahore
| | - Sikander Ali
- Institute of Industrial Biotechnology, Government College University
| | - Nauman Aftab
- Institute of Industrial Biotechnology, Government College University
| | - Mobina Ulfat
- Department of Botany, Lahore College for Women University
| | - Sajida Naseem
- Department of Zoology, University of Education, Lower Mall Campus
| | - Urooj
- Superior College Daska, Department of Zoology, Government College University
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Kolesnikova A, Konakova T, Taskaeva A, Kudrin A. Soil invertebrates of coniferous forests along a gradient of air pollution (Komi Republic). Biodivers Data J 2021; 9:e75586. [PMID: 34840510 PMCID: PMC8613141 DOI: 10.3897/bdj.9.e75586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Accepted: 11/10/2021] [Indexed: 11/20/2022] Open
Abstract
Background The role of soil invertebrates in the cycle of substances, soil-forming processes and the provision of ecosystem services is undeniable. Therefore, soil invertebrates are valuable in bioindication studies. Comprehensive research of soil invertebrates in the production area of Mondi Syktyvkar JSC as the largest pulp and paper enterprise in the European part of Russia was initiated in 2003. A huge amount of data about composition, abundance and structure of soil macro- and mesofauna along an impact gradient was accumulated during the period from 2003 to 2019 years. These data can be used to study local biodiversity, monitor the state of soil invertebrate communities and assess the impact of the pulp and paper industry on the environment. New information Datasets here presented include information from a monitoring programme for soil invertebrates that inhabit coniferous forests in the production area of Mondi Syktyvkar JSC (Komi Republic). The assemblages' structure of macrofauna, collembolans and nematodes are described. Information on the number of individuals of springtail species, nematodes genera and macrofauna taxa is given. A total of 11146 sampling events of macrofauna, 6673 sampling events of Collembola, and 2592 sampling events of Nematoda are recorded along a gradient of air pollution from pulp and paper industry emissions.
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Affiliation(s)
- Alla Kolesnikova
- Institut of Biology Komi SC UrD RAS, Syktyvkar, Russia Institut of Biology Komi SC UrD RAS Syktyvkar Russia
| | - Tatyana Konakova
- Institut of Biology Komi SC UrD RAS, Syktyvkar, Russia Institut of Biology Komi SC UrD RAS Syktyvkar Russia
| | - Anastasia Taskaeva
- Institut of Biology Komi SC UrD RAS, Syktyvkar, Russia Institut of Biology Komi SC UrD RAS Syktyvkar Russia
| | - Alexey Kudrin
- Institut of Biology Komi SC UrD RAS, Syktyvkar, Russia Institut of Biology Komi SC UrD RAS Syktyvkar Russia
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Pelosi C, Thiel P, Bart S, Amossé J, Jean-Jacques J, Thoisy JC, Crouzet O. The contributions of enchytraeids and earthworms to the soil mineralization process in soils with fungicide. Ecotoxicology 2021; 30:1910-1921. [PMID: 34379246 DOI: 10.1007/s10646-021-02452-z] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 07/02/2021] [Indexed: 06/13/2023]
Abstract
Pesticides may harm soil organisms such as earthworms and enchytraeids, but knowledge is lacking on their relative sensitivity to these chemicals and the consequences on soil functions. The aim of this study was to assess the impact of exposure to a commercial fungicide formulation (Swing® Gold, containing dimoxystrobin and epoxiconazole) on the function of earthworms (Aporrectodea caliginosa) and enchytraeids (Enchytraeus buchholzi) in soil organic matter (SOM) mineralization. The soil organisms were incubated alone and together in a 26-day laboratory experiment. At the recommended field rate, the fungicide induced a decrease in the SOM mineralization and a delay in the maximum daily CO2 emissions compared to the control soil without fungicide. Soil fauna also influenced SOM mineralization with a higher cumulated CO2 release after 26 days in the control soil with earthworms (by 21%) than without fauna. When both earthworms and enchytraeids were present, SOM mineralization did not increase, and there was a negative effect on earthworm weight gain. Finally, an alteration of fauna influence with treatment was observed from day 19, meaning that the effect of fauna on SOM mineralization changed with fungicide treatment. Earthworms no longer promoted SOM mineralization when fungicide was present at three-fold the recommended field rate. The effects of enchytraeids on SOM mineralization were similar with and without fungicide exposure. This study underlines the importance of considering the relative sensitivity of soil organisms to environmental factors and interactions between them when assessing soil functioning.
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Affiliation(s)
- C Pelosi
- INRAE, Avignon Université, UMR EMMAH, F-84000, Avignon, France.
| | - P Thiel
- INRAE, AgroParisTech, Université Paris-Saclay, UMR ECOSYS, F-78026, Versailles, France
| | - S Bart
- INRAE, AgroParisTech, Université Paris-Saclay, UMR ECOSYS, F-78026, Versailles, France
- Department of Environment and Geography, University of York, YO10 5NG, York, UK
| | - J Amossé
- INRAE, AgroParisTech, Université Paris-Saclay, UMR ECOSYS, F-78026, Versailles, France
| | - J Jean-Jacques
- INRAE, AgroParisTech, Université Paris-Saclay, UMR ECOSYS, F-78850, Thiverval-Grignon, France
| | - J-C Thoisy
- INRAE, AgroParisTech, Université Paris-Saclay, UMR ECOSYS, F-78026, Versailles, France
| | - O Crouzet
- INRAE, AgroParisTech, Université Paris-Saclay, UMR ECOSYS, F-78026, Versailles, France
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Prendergast-Miller MT, Jones DT, Berdeni D, Bird S, Chapman PJ, Firbank L, Grayson R, Helgason T, Holden J, Lappage M, Leake J, Hodson ME. Arable fields as potential reservoirs of biodiversity: Earthworm populations increase in new leys. Sci Total Environ 2021; 789:147880. [PMID: 34058593 DOI: 10.1016/j.scitotenv.2021.147880] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 05/14/2021] [Accepted: 05/14/2021] [Indexed: 06/12/2023]
Abstract
Managing soil to support biodiversity is important to sustain the ecosystem services provided by soils upon which society depends. There is increasing evidence that functional diversity of soil biota is important for ecosystem services, and has been degraded by intensive agriculture. Importantly, the spatial distribution of reservoirs of soil biota in and surrounding arable fields is poorly understood. In a field experiment, grass-clover ley strips were introduced into four arable fields which had been under continuous intensive/conventional arable rotation for more than 10 years. Earthworm communities in arable fields and newly established grass-clover leys, as well as field boundary land uses (hedgerows and grassy field margins), were monitored over 2 years after arable-to-ley conversions. Within 2 years, earthworm abundance in new leys was 732 ± 244 earthworms m-2, similar to that in field margin soils (619 ± 355 earthworms m-2 yr-1) and four times higher than in adjacent arable soil (185 ± 132 earthworms m-2). Relative to the arable soils, earthworm abundance under the new leys showed changes in community composition, structure and functional group, which were particularly associated with an increase in anecic earthworms; thus new leys became more similar to grassy field margins. Earthworm abundance was similar in new leys that were either connected to biodiversity reservoirs i.e. field margins and hedgerows, or not (installed earthworm barriers). This suggests that, for earthworm communities in typical arable fields, biodiversity reservoirs in adjacent field margins and hedgerows may not be critical for earthworm populations to increase. We conclude that the increase in earthworm abundance in the new leys observed over 2 years was driven by recruitment from the existing residual population in arable soils. Therefore, arable soils are also potential reservoirs of biodiversity.
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Affiliation(s)
- Miranda T Prendergast-Miller
- Department of Environment and Geography, University of York, Wentworth Way, York YO10 5NG, UK; Department of Geography and Environmental Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, UK.
| | - David T Jones
- Life Sciences Department, Natural History Museum, London SW7 5BD, UK
| | - Despina Berdeni
- The University of Sheffield, Department of Animal and Plant Sciences, Sheffield S10 2TN, UK; Crop Physiology, ADAS Gleadthorpe, Meden Vale, Mansfield, Nottinghamshire NG20 9PD, UK
| | - Susannah Bird
- Department of Biology, University of York, Wentworth Way, YO10 5DD, UK
| | - Pippa J Chapman
- water@leeds, School of Geography, University of Leeds, Leeds LS2 9JT, UK
| | - Leslie Firbank
- water@leeds, School of Biology, University of Leeds, Leeds LS2 9JT, UK
| | - Richard Grayson
- water@leeds, School of Geography, University of Leeds, Leeds LS2 9JT, UK
| | - Thorunn Helgason
- Department of Biology, University of York, Wentworth Way, YO10 5DD, UK
| | - Joseph Holden
- water@leeds, School of Geography, University of Leeds, Leeds LS2 9JT, UK
| | - Martin Lappage
- water@leeds, School of Biology, University of Leeds, Leeds LS2 9JT, UK
| | - Jonathan Leake
- The University of Sheffield, Department of Animal and Plant Sciences, Sheffield S10 2TN, UK
| | - Mark E Hodson
- Department of Environment and Geography, University of York, Wentworth Way, York YO10 5NG, UK
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11
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Daniels B, Roß-Nickoll M, Jänsch S, Pieper S, Römbke J, Scholz-Starke B, Ottermanns R. Application of the Closure Principle Computational Approach Test to Assess Ecotoxicological Field Studies: Comparative Analysis Using Earthworm Field Test Abundance Data. Environ Toxicol Chem 2021; 40:1750-1760. [PMID: 33590918 DOI: 10.1002/etc.5015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 09/21/2020] [Accepted: 02/10/2021] [Indexed: 06/12/2023]
Abstract
Field studies to determine the effects of chemicals on earthworm communities are generally conducted according to International Organization for Standardization standard 11268-3 (and later comments). However, statistical test procedures suggested in the guideline are frequently criticized, mainly for 2 reasons: 1) Earthworm abundances are count data and often do not fulfill requirements for multiple t tests (normal distribution and homogeneity of variance), and 2) the resulting toxicity metrics of multiple testing procedures (no/lowest-observed-effect concentrations [NOEC/LOEC]) fail to adequately detect the actual level of effects. Recently, a new method to overcome these shortcomings was presented by the introduction of the closure principle computational approach test (CPCAT). We applied this statistical method to assess chemical effects on abundance in a large dataset of 26 earthworm field studies (with up to 3 test chemical application rates) and an additional extended study with 6 application rates. A comparative analysis was provided considering results of well-established multiple testing approaches (Dunnett's test) with particular consideration of the degree of overdispersion found in these data. It was shown that the CPCAT detects substantially more effects in earthworm field tests as statistically significant than standard t test approaches. This lowered the LOEC/NOEC for many chemical treatments to control comparisons. As a consequence, the statistically detected NOECs/LOECs were often set at lower percentage deviations between control and chemical treatment. This is the first time the performance of the CPCAT has been assessed within a comprehensive analysis of earthworm field study data. Environ Toxicol Chem 2021;40:1750-1760. © 2021 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.
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Affiliation(s)
- Benjamin Daniels
- Institute for Environmental Research, RWTH Aachen University, Aachen, Germany
| | - Martina Roß-Nickoll
- Institute for Environmental Research, RWTH Aachen University, Aachen, Germany
| | | | | | | | - Björn Scholz-Starke
- Institute for Environmental Research, RWTH Aachen University, Aachen, Germany
- Darwin Statistics, Aachen, Germany
| | - Richard Ottermanns
- Institute for Environmental Research, RWTH Aachen University, Aachen, Germany
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12
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Obert T, Rurik I, Vd’ačný P. Diversity and Eco-Evolutionary Associations of Endosymbiotic Astome Ciliates With Their Lumbricid Earthworm Hosts. Front Microbiol 2021; 12:689987. [PMID: 34220782 PMCID: PMC8250849 DOI: 10.3389/fmicb.2021.689987] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Accepted: 05/06/2021] [Indexed: 12/17/2022] Open
Abstract
Coevolution of endosymbionts with their hosts plays an important role in the processes of speciation and is among the most fascinating topics in evolutionary biology. Astome ciliates represent an interesting model for coevolutionary studies because they are so tightly associated with their host organisms that they completely lost the cell oral apparatus. In the present study, we used five nuclear markers (18S rRNA gene, ITS1-5.8S-ITS2 region, and 28S rRNA gene) and two mitochondrial genes (16S rRNA gene and cytochrome c oxidase subunit I) to explore the diversity of astomes inhabiting the digestive tract of lumbricid earthworms at temperate latitudes in Central Europe and to cast more light on their host specificity and coevolution events that shaped their diversification. The present coevolutionary and phylogenetic interaction-adjusted similarity analyses suggested that almost every host switch leads to speciation and firm association with the new host. Nevertheless, the suggested high structural host specificity of astomes needs to be tested with increased earthworm sampling, as only 52 out of 735 lumbricid earthworms (7.07%) were inhabited by ciliates. On the other hand, the diversification of astomes associated with megascolecid and glossoscolecid earthworms might have been driven by duplication events without host switching.
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13
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Shekhovtsov SV, Shipova AA, Poluboyarova TV, Vasiliev GV, Golovanova EV, Geraskina AP, Bulakhova NA, Szederjesi T, Peltek SE. Species Delimitation of the Eisenia nordenskioldi Complex (Oligochaeta, Lumbricidae) Using Transcriptomic Data. Front Genet 2020; 11:598196. [PMID: 33365049 PMCID: PMC7750196 DOI: 10.3389/fgene.2020.598196] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Accepted: 11/09/2020] [Indexed: 01/22/2023] Open
Abstract
Eisenia nordenskioldi (Eisen, 1879) is the only autochthonous Siberian earthworm with a large distribution that ranges from tundra to steppe and broadleaved forests. This species has a very high morphological, ecological, karyological, and genetic diversity, so it was proposed that E. nordenskioldi should be split into several species. However, the phylogeny of the complex was unclear due to the low resolution of the methods used and the high diversity that should have been taken into account. We investigated this question by (1) studying the diversity of the COI gene of E. nordenskioldi throughout its range and (2) sequencing transcriptomes of different genetic lineages to infer its phylogeny. We found that E. nordenskioldi is monophyletic and is split into two clades. The first one includes the pigmented genetic lineages widespread in the northern and western parts of the distribution, and the second one originating from the southern and southeastern part of the species' range and representing both pigmented and non-pigmented forms. We propose to split the E. nordenskioldi complex into two species, E. nordenskioldi and Eisenia sp. 1 (aff. E. nordenskioldi), corresponding to these two clades. The currently recognized non-pigmented subspecies E. n. pallida will be abolished as a polyphyletic and thus a non-natural taxon, while Eisenia sp. 1 will be expanded to include several lineages earlier recognized as E. n. nordenskioldi and E. n. pallida.
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Affiliation(s)
- Sergei V Shekhovtsov
- Department of Molecular Biotechnology, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.,Kurchatov Genomic Center, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.,Laboratory of Biocenology, Institute of Biological Problems of the North of the Far Eastern Branch of the Russian Academy of Sciences, Magadan, Russia
| | - Aleksandra A Shipova
- Department of Molecular Biotechnology, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.,Kurchatov Genomic Center, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
| | - Tatiana V Poluboyarova
- Department of Molecular Biotechnology, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.,Kurchatov Genomic Center, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.,Laboratory of Biocenology, Institute of Biological Problems of the North of the Far Eastern Branch of the Russian Academy of Sciences, Magadan, Russia
| | - Gennady V Vasiliev
- Department of Molecular Biotechnology, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
| | - Elena V Golovanova
- Laboratory of Systematics and Ecology of Invertebrates, Omsk State Pedagogical University, Omsk, Russia
| | - Anna P Geraskina
- Center for Forest Ecology and Productivity of the Russian Academy of Sciences, Moscow, Russia
| | - Nina A Bulakhova
- Laboratory of Biocenology, Institute of Biological Problems of the North of the Far Eastern Branch of the Russian Academy of Sciences, Magadan, Russia.,Laboratory of Biodiversity and Ecology, Tomsk State University, Tomsk, Russia
| | - Tímea Szederjesi
- Department of Zoology, Hungarian Natural History Museum, Budapest, Hungary
| | - Sergei E Peltek
- Department of Molecular Biotechnology, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.,Kurchatov Genomic Center, Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia
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14
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Bart S, Pelosi C, Nélieu S, Lamy I, Péry ARR. An energy-based model to analyze growth data of earthworms exposed to two fungicides. Environ Sci Pollut Res Int 2020; 27:741-750. [PMID: 31811607 DOI: 10.1007/s11356-019-06985-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Accepted: 11/06/2019] [Indexed: 05/14/2023]
Abstract
The pesticide risk assessment for earthworms is currently performed using standardized tests, the model species Eisenia fetida, and the analyses of the data obtained are performed with ad hoc statistical tools. We assessed the impact of two fungicides on the entire growth pattern of the earthworm species Aporrectodea caliginosa, which is highly representative of agricultural fields. Individuals of three different ages (from hatching to 56 days old) were exposed to Cuprafor micro® (copper oxychloride) and Swing® Gold (dimoxystrobin and epoxiconazole). Data were analyzed with an energy-based toxicodynamic model coupled with a toxicokinetic model. The copper fungicide caused a drastic growth inhibition once the no effect concentration (NEC), estimated at 65 mg kg-1 of copper, was exceeded. The Swing® Gold negatively affected the growth with NEC values estimated at 0.387 mg kg-1 and 0.128 mg kg-1 for the dimoxystrobin and the epoxiconazole in this fungicide formulation, respectively. The time-profile of the effects on A. caliginosa individuals was fully accounted for by the model, whatever their age of exposure. Furthermore, toxicity data analyses, supported by measurements of fungicide concentrations in earthworm at the end of the experiment, allowed bettering understanding of the mechanisms of action of the fungicides towards earthworm growth.
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Affiliation(s)
- Sylvain Bart
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France.
| | - Céline Pelosi
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
- UMR EMMAH, INRA, Université d'Avignon et des Pays de Vaucluse, 84914, Avignon, France
| | - Sylvie Nélieu
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
| | - Isabelle Lamy
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
| | - Alexandre R R Péry
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
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15
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Obert T, Vďačný P. Evolutionary Origin and Host Range of Plagiotoma lumbrici (Ciliophora, Hypotrichia), an Obligate Gut Symbiont of Lumbricid Earthworms. J Eukaryot Microbiol 2019; 67:176-189. [PMID: 31603571 DOI: 10.1111/jeu.12768] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Revised: 07/29/2019] [Accepted: 10/04/2019] [Indexed: 11/28/2022]
Abstract
Four common earthworm species, the anecic Lumbricus terrestris, the endogeic Octolasion tyrteum as well as the epigeic Eisenia fetida and Dendrobaena veneta, were examined for the presence of the microbial gut symbiont Plagiotoma lumbrici. The evolutionary origin of this endobiotic microbe was reconstructed, using the 18S rRNA gene, the ITS1-5.8S-ITS2 region, and the first two domains of the 28S rRNA gene. Plagiotoma lumbrici was exclusively detected in the anecic Lumbricus terrestris. Multigene analyses and the ITS2 secondary structure robustly determined the phylogenetic home of Plagiotoma lumbrici populations within the oxytrichid Dorsomarginalia (Spirotrichea: Hypotrichia) as a sister taxon of the free-living Hemiurosomoida longa. This indicates that earthworms obtained their gut endosymbiont by ingesting soil/leaf litter containing oxytrichine ciliates that became adapted to the intestinal tract of earthworms. Interestingly, according to the literature data, Plagiotoma lumbrici was detected in multiple anecic and some epigeic but never in endogeic earthworms. These observations suggest that Plagiotoma lumbrici might be adapted to certain gut conditions and the lifestyle of anecic Lumbricidae, such as Lumbricus, Aporrectodea, and Scherotheca, as well as of some co-occurring epigeic Lumbricus species.
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Affiliation(s)
- Tomáš Obert
- Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15, Bratislava, Slovak Republic
| | - Peter Vďačný
- Department of Zoology, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15, Bratislava, Slovak Republic
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16
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Bart S, Barraud A, Amossé J, Péry ARR, Mougin C, Pelosi C. Effects of two common fungicides on the reproduction of Aporrectodea caliginosa in natural soil. Ecotoxicol Environ Saf 2019; 181:518-524. [PMID: 31234066 DOI: 10.1016/j.ecoenv.2019.06.049] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2019] [Revised: 06/10/2019] [Accepted: 06/17/2019] [Indexed: 06/09/2023]
Abstract
The use of pesticides in agroecosystems can have negative effects on earthworms, which play key roles in soil functioning such as organic matter decomposition. The aim of this study was to assess the effects of two fungicides (Cuprafor micro®, composed of copper oxychloride, and Swing Gold®, composed of epoxiconazole (EPX) and dimoxystrobin (DMX)) on earthworm reproduction by exposing adults and cocoons. First, adult Aporrectodea caliginosa individuals were exposed for 28 days to 3.33, 10 and 30 times the recommended dose (RD) of Cuprafor micro® corresponding to 25.8, 77.5 and 232.5 mg kg-1 dry soil of copper, respectively, and 0.33, 1 and 3 times the RD of Swing Gold® (corresponding to 5.2 × 10-2 mg DMX kg-1 + 1.94 × 10-2 mg EPX kg-1, 1.55 × 10-1 mg DMX kg-1 + 5.81 × 10-2 mg EPX kg-1 and 4.62 × 10-1 mg DMX kg-1 + 1.74 × 10-1 mg EPX kg-1 respectively), in addition to a control soil with no fungicide treatment. Cocoon variables (production, weight, hatching success, hatching time) were monitored. Second, "naïve" cocoons produced by uncontaminated earthworms were exposed to soils contaminated by the same concentrations of the two fungicides, and we assessed hatching success and hatching time. In the first experiment, cocoon production was halved at the highest copper concentration (232.5 mg Cu kg-1 of dry soil) as compared to the control. Cocoons took 5 more days to hatch, and the hatching success decreased by 35% as compared to the control. In the Swing Gold® treatments, cocoon production was reduced by 63% at 3 times the RD, and the hatching success significantly decreased by 16% at the RD. In the second experiment, only the hatching success of cocoons was impacted by Swing Gold® at 3 times the RD (30% less hatching). It is concluded that the cocoon stock in the soil is crucial for the renewal of populations in the field. The most sensitive endpoint was the hatching success of the cocoons produced by exposed adults. This endpoint and the effects observed on the "naïve" cocoons could be taken into account in pesticide risk assessment.
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Affiliation(s)
- Sylvain Bart
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France.
| | - Alexandre Barraud
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
| | - Joël Amossé
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
| | - Alexandre R R Péry
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
| | - Christian Mougin
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
| | - Céline Pelosi
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, 78026, Versailles, France
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17
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Boyle PE, Richardson MD, Savin MC, Karcher DE, Potter DA. Ecology and management of earthworm casting on sports turf. Pest Manag Sci 2019; 75:2071-2078. [PMID: 31099176 DOI: 10.1002/ps.5479] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2019] [Revised: 05/06/2019] [Accepted: 05/07/2019] [Indexed: 06/09/2023]
Abstract
Earthworm activity is beneficial in most natural and agricultural systems, but excessive earthworm casting is a problem on sports fields worldwide. Expulsion of soil-rich earthworm fecal matter, or casts, as mounds of soil on the turf canopy can muddy the surface, reduce photosynthesis, and lead to thinning, weed invasion and surface softening. Casts affect ball roll on sports fields, cause fouling of maintenance equipment, and dull mower blades. Build-up of cast material on reel mower units can affect height and quality of cut. Casting activity is dependent on environmental conditions such as soil texture, temperature, moisture, pH, and organic matter. Response to environmental conditions varies by species. Management options are limited, because no pesticides are specifically labeled for earthworm control at this time, and cultural control methods such as soil modification, turfgrass clipping removal, and sand topdressing have limited and inconsistent efficacy. Products containing plant-derived saponins and irritants show promise for earthworm management. Pest management practices to mitigate excessive earthworm casting will likely need to be species-specific, but limited knowledge of earthworm identification by end-users further inhibits the efficacy of control measures. © 2019 Society of Chemical Industry.
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Affiliation(s)
- Paige E Boyle
- Department of Horticulture, University of Arkansas, Fayetteville, AR, USA
| | | | - Mary C Savin
- Department of Crop, Soils, and Environmental Sciences, University of Arkansas, Fayetteville, AR, USA
| | - Douglas E Karcher
- Department of Horticulture, University of Arkansas, Fayetteville, AR, USA
| | - Daniel A Potter
- Department of Entomology, University of Kentucky, Lexington, KY, USA
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18
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Bart S, Pelosi C, Barraud A, Péry ARR, Cheviron N, Grondin V, Mougin C, Crouzet O. Earthworms Mitigate Pesticide Effects on Soil Microbial Activities. Front Microbiol 2019; 10:1535. [PMID: 31333628 PMCID: PMC6616067 DOI: 10.3389/fmicb.2019.01535] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Accepted: 06/20/2019] [Indexed: 11/13/2022] Open
Abstract
Earthworms act synergistically with microorganisms in soils. They are ecosystem engineers involved in soil organic matter degradation and nutrient cycling, leading to the modulation of resource availability for all soil organisms. Using a soil microcosm approach, we aimed to assess the influence of the earthworm Aporrectodea caliginosa on the response of soil microbial activities against two fungicides, i.e., Cuprafor Micro® (copper oxychloride, a metal) and Swing® Gold (epoxiconazole and dimoxystrobin, synthetic organic compounds). The potential nitrification activity (PNA) and soil enzyme activities (glucosidase, phosphatase, arylamidase, and urease) involved in biogeochemical cycling were measured at the end of the incubation period, together with earthworm biomass. Two common indices of the soil biochemistry were used to aggregate the response of the soil microbial functioning: the geometric mean (Gmean) and the Soil Quality Index (SQI). At the end of the experiment, the earthworm biomass was not impacted by the fungicide treatments. Overall, in the earthworm-free soil microcosms, the two fungicides significantly increased several soil enzyme and nitrification activities, leading to a higher GMean index as compared to the non-treated control soils. The microbial activity responses depended on the type of activity (nitrification was the most sensitive one), on the fungicide (Swing® Gold or Cuprafor Micro®), and on the doses. The SQI indices revealed higher effects of both fungicides on the soil microbial activity in the absence of earthworms. The presence of earthworms enhanced all soil microbial activities in both the control and fungicide-contaminated soils. Moreover, the magnitude of the fungicide impact, integrated through the SQI index, was mitigated by the presence of earthworms, conferring a higher stability of microbial functional diversity. Our results highlight the importance of biotic interactions in the response of indicators of soil functioning (i.e., microbial activity) to pesticides.
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Affiliation(s)
- Sylvain Bart
- UMR ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, Versailles, France
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19
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Eisenhauer N, Ferlian O, Craven D, Hines J, Jochum M. Ecosystem responses to exotic earthworm invasion in northern North American forests. Res Ideas Outcomes 2019; 5:e34564. [PMID: 31032397 PMCID: PMC6485675 DOI: 10.3897/rio.5.e34564] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Indexed: 11/12/2022] Open
Abstract
Earth is experiencing a substantial loss of biodiversity at the global scale, while both species gains and losses are occurring at local and regional scales. The influence of these nonrandom changes in species distributions could profoundly affect the functioning of ecosystems and the essential services that they provide. However, few experimental tests have been conducted examining the influence of species invasions on ecosystem functioning. Even fewer have been conducted using invasive ecosystem engineers, which can have disproportionately strong influence on native ecosystems relative to their own biomass. The invasion of exotic earthworms is a prime example of an ecosystem engineer that is influencing many ecosystems around the world. In particular, European earthworm invasions of northern North American forests cause simultaneous species gains and losses with significant consequences for essential ecosystem processes like nutrient cycling and crucial services to humanity like soil erosion control and carbon sequestration. Exotic earthworms are expected to select for specific traits in communities of soil microorganisms (fast-growing bacteria species), soil fauna (promoting the bacterial energy channel), and plants (graminoids) through direct and indirect effects. This will accelerate some ecosystem processes and decelerate others, fundamentally altering how invaded forests function. This project aims to investigate ecosystem responses of northern North American forests to earthworm invasion. Using a novel, synthetic combination of field observations, field experiments, lab experiments, and meta-analyses, the proposed work will be the first systematic examination of earthworm effects on (1) plant communities and (2) soil food webs and processes. Further, (3) effects of a changing climate (warming and reduced summer precipitation) on earthworm performance will be investigated in a unique field experiment designed to predict the future spread and consequences of earthworm invasion in North America. By assessing the soil chemical and physical properties as well as the taxonomic (e.g., by the latest next-generation sequencing techniques) and functional composition of plant, soil microbial and animal communities and the processes they drive in four forests, work packages I-III take complementary approaches to derive a comprehensive and generalizable picture of how ecosystems change in response to earthworm invasion. Finally, in work package IV meta-analyses will be used to integrate the information from work packages I-III and existing literature to investigate if earthworms cause invasion waves, invasion meltdowns, habitat homogenization, and ecosystem state shifts. Global data will be synthesized to test if the relative magnitude of effects differs from place to place depending on the functional dissimilarity between native soil fauna and exotic earthworms. Moving from local to global scale, the present proposal examines the influence of earthworm invasions on biodiversity-ecosystem functioning relationships from an aboveground-belowground perspective in natural settings. This approach is highly innovative as it utilizes the invasion by exotic earthworms as an exciting model system that links invasion biology with trait-based community ecology, global change research, and ecosystem ecology, pioneering a new generation of biodiversity-ecosystem functioning research.
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Affiliation(s)
- Nico Eisenhauer
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Leipzig University, Leipzig, Germany
| | - Olga Ferlian
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Leipzig University, Leipzig, Germany
| | - Dylan Craven
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Leipzig University, Leipzig, Germany
| | - Jes Hines
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Leipzig University, Leipzig, Germany
| | - Malte Jochum
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Leipzig University, Leipzig, Germany
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20
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Bacher MG, Fenton O, Bondi G, Creamer RE, Karmarkar M, Schmidt O. The impact of cattle dung pats on earthworm distribution in grazed pastures. BMC Ecol 2018; 18:59. [PMID: 30567522 PMCID: PMC6299995 DOI: 10.1186/s12898-018-0216-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Accepted: 12/12/2018] [Indexed: 11/10/2022] Open
Abstract
Background Grazed grassland management regimes can have various effects on soil fauna. For example, effects on earthworms can be negative through compaction induced by grazing animals, or positive mediated by increases in sward productivity and cattle dung pats providing a food source. Knowledge gaps exist in relation to the behaviour of different earthworm species i.e. their movement towards and aggregation under dung pats, the legacy effects of pats and the spatial area of recruitment. The present study addressed these knowledge gaps in field experiments, over 2 years, using natural and simulated dung pats on two permanent, intensively grazed pastures in Ireland. Results Dung pats strongly affected spatial earthworm distribution, with up to four times more earthworms aggregating beneath pats, than in the control locations away from pats. In these earthworm communities comprising 11 species, temporally different aggregation and dispersal patterns were observed, including absence of individual species from control locations, but no clear successional responses. Epigeic species in general, but also certain species of the anecic and endogeic groups were aggregating under dung. Sampling after complete dung pat disappearance (27 weeks after application) suggested an absence of a dung pat legacy effect on earthworm communities. Based on species distributions, the maximum size of the recruitment area from which earthworms moved to pats was estimated to be 3.8 m2 per dung pat. Since actual grazing over 6 weeks would result in the deposition of about 300 dung pats per ha, it is estimated that a surface area of 1140 m2 or about 11% of the total grazing area can be influenced by dung pats in a given grazing period. Conclusions This study showed that the presence of dung pats in pastures creates temporary hot spots in spatial earthworm species distribution, which changes over time. The findings highlight the importance of considering dung pats, temporally and spatially, when sampling earthworms in grazed pastures. Published comparisons of grazed and cut grasslands probably reached incorrect conclusions by ignoring or deliberately avoiding dung pats. Furthermore, the observed intense aggregation of earthworms beneath dung pats suggests that earthworm functions need to be assessed separately at these hot spots. Electronic supplementary material The online version of this article (10.1186/s12898-018-0216-6) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- M G Bacher
- Teagasc, Environment Research Centre, Wexford, Ireland. .,UCD School of Agriculture and Food Science, University College Dublin, Dublin 4, Ireland.
| | - O Fenton
- Teagasc, Environment Research Centre, Wexford, Ireland
| | - G Bondi
- Teagasc, Environment Research Centre, Wexford, Ireland
| | - R E Creamer
- Soil Biology Group, Wageningen University, Wageningen, The Netherlands
| | - M Karmarkar
- Teagasc, Environment Research Centre, Wexford, Ireland
| | - O Schmidt
- UCD School of Agriculture and Food Science, University College Dublin, Dublin 4, Ireland.,UCD Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland
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Bart S, Amossé J, Lowe CN, Mougin C, Péry ARR, Pelosi C. Aporrectodea caliginosa, a relevant earthworm species for a posteriori pesticide risk assessment: current knowledge and recommendations for culture and experimental design. Environ Sci Pollut Res Int 2018; 25:33867-33881. [PMID: 29931645 PMCID: PMC6245014 DOI: 10.1007/s11356-018-2579-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2017] [Accepted: 06/18/2018] [Indexed: 05/27/2023]
Abstract
Ecotoxicological tests with earthworms are widely used and are mandatory for the risk assessment of pesticides prior to registration and commercial use. The current model species for standardized tests is Eisenia fetida or Eisenia andrei. However, these species are absent from agricultural soils and often less sensitive to pesticides than other earthworm species found in mineral soils. To move towards a better assessment of pesticide effects on non-target organisms, there is a need to perform a posteriori tests using relevant species. The endogeic species Aporrectodea caliginosa (Savigny, 1826) is representative of cultivated fields in temperate regions and is suggested as a relevant model test species. After providing information on its taxonomy, biology, and ecology, we reviewed current knowledge concerning its sensitivity towards pesticides. Moreover, we highlighted research gaps and promising perspectives. Finally, advice and recommendations are given for the establishment of laboratory cultures and experiments using this soil-dwelling earthworm species.
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Affiliation(s)
- Sylvain Bart
- UMR1402 ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, Bâtiment 6 RD 10, 78026 Versailles Cedex, France
| | - Joël Amossé
- UMR1402 ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, Bâtiment 6 RD 10, 78026 Versailles Cedex, France
| | - Christopher N. Lowe
- School of Forensic and Applied Sciences, University of Central Lancashire, Preston, PR1 2HE UK
| | - Christian Mougin
- UMR1402 ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, Bâtiment 6 RD 10, 78026 Versailles Cedex, France
| | - Alexandre R. R. Péry
- UMR1402 ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, Bâtiment 6 RD 10, 78026 Versailles Cedex, France
| | - Céline Pelosi
- UMR1402 ECOSYS, INRA, AgroParisTech, Université Paris-Saclay, Bâtiment 6 RD 10, 78026 Versailles Cedex, France
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22
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Scheffczyk A, Floate KD, Blanckenhorn WU, Düring RA, Klockner A, Lahr J, Lumaret JP, Salamon JA, Tixier T, Wohde M, Römbke J. Nontarget effects of ivermectin residues on earthworms and springtails dwelling beneath dung of treated cattle in four countries. Environ Toxicol Chem 2016; 35:1959-1969. [PMID: 26565894 DOI: 10.1002/etc.3306] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2015] [Revised: 05/29/2015] [Accepted: 11/09/2015] [Indexed: 06/05/2023]
Abstract
The authorization of veterinary medicinal products requires that they be assessed for nontarget effects in the environment. Numerous field studies have assessed these effects on dung organisms. However, few studies have examined effects on soil-dwelling organisms, which might be exposed to veterinary medicinal product residues released during dung degradation. The authors compared the abundance of earthworms and springtails in soil beneath dung from untreated cattle and from cattle treated 0 d, 3 d, 7 d, 14 d, and 28 d previously with ivermectin. Study sites were located in different ecoregions in Switzerland (Continental), The Netherlands (Atlantic), France (Mediterranean), and Canada (Northern Mixed Grassland). Samples were collected using standard methods from 1 mo to 12 mo after pat deposition. Ivermectin concentrations in soil beneath dung pats ranged from 0.02 mg/kg dry weight (3 mo) to typically <0.006 mg/kg dry weight (5-7 mo). Earthworms were abundant and species-rich at the Swiss and Dutch sites, less common with fewer species at the French site, and essentially absent at the Canadian site. Diverse but highly variable communities of springtails were present at all sites. Overall, results showed little effect of residues on either earthworms or springtails. The authors recommend that inclusion of soil organisms in field studies to assess the nontarget effects of veterinary medicinal products be required only if earthworms or springtails exhibit sensitivity to the product in laboratory tests. Environ Toxicol Chem 2016;35:1959-1969. © 2015 SETAC.
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Affiliation(s)
| | - Kevin D Floate
- Lethbridge Research Centre, Agriculture and Agri-Food Canada, Lethbridge, Alberta, Canada
| | - Wolf U Blanckenhorn
- Institute of Evolutionary Biology and Environmental Studies, Zurich, Switzerland
| | - Rolf-Alexander Düring
- Institute of Soil Science and Soil Conservation, Justus Liebig University Giessen, IFZ, Giessen, Germany
| | - Andrea Klockner
- Institute of Soil Science and Soil Conservation, Justus Liebig University Giessen, IFZ, Giessen, Germany
| | - Joost Lahr
- Alterra, Wageningen UR, Wageningen, The Netherlands
| | - Jean-Pierre Lumaret
- Laboratoire de Zoogéographie UPVM, CEFE UMR 5175, CNRS-Université de Montpellier-Université Paul-Valéry Montpellier-EPHE, Montpellier, France
| | - Jörg-Alfred Salamon
- Ecology & Evolution, Tierärztliche Hochschule Hannover, ITZ, Hannover, Germany
| | - Thomas Tixier
- Laboratoire de Zoogéographie UPVM, CEFE UMR 5175, CNRS-Université de Montpellier-Université Paul-Valéry Montpellier-EPHE, Montpellier, France
| | - Manuel Wohde
- Institute of Soil Science and Soil Conservation, Justus Liebig University Giessen, IFZ, Giessen, Germany
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Shekhovtsov SV, Golovanova EV, Peltek SE. Mitochondrial DNA variation in Eisenia n. nordenskioldi ( Lumbricidae) in Europe and Southern Urals. Mitochondrial DNA A DNA Mapp Seq Anal 2015; 27:4643-4645. [PMID: 26644175 DOI: 10.3109/19401736.2015.1101594] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
There are many peregrine European earthworm species that are found in Siberia. In contrast, it is generally considered that the only Siberian species, E. n. nordenskioldi, was capable to disperse in the reverse direction, from Siberia into Europe. We studied genetic diversity of E. n. nordenskioldi in Southern Urals and Eastern Europe using the mitochondrial cox1 gene. We found that E. n. nordenskioldi from that region represents a new genetic lineage distinct from the previously known populations of this species from Siberia. Molecular clock estimates suggest that this newly found lineage separated from the rest of the species in Lower Pleistocene. Within the studied sample, we detected two geographically restricted groups, which also diverged long before the Holocene, one found in the East European Plain and the other restricted to the Urals. Those two groups were found in sympatry in only one population. Therefore, our results do not support the traditional viewpoint, suggesting that E. n. nordenskioldi is definitely not a recent invader in Europe.
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Affiliation(s)
- Sergei V Shekhovtsov
- a Laboratory of Molecular Biotechnology , Institute of Cytology and Genetics SB RAS , Novosibirsk , Russia and
| | - Elena V Golovanova
- b Department of Zoology and Physiology , Omsk State Pedagogical University , Omsk , Russia
| | - Sergei E Peltek
- a Laboratory of Molecular Biotechnology , Institute of Cytology and Genetics SB RAS , Novosibirsk , Russia and
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Fernández R, Novo M, Marchán DF, Díaz Cosín DJ. Diversification patterns in cosmopolitan earthworms: similar mode but different tempo. Mol Phylogenet Evol 2016; 94:701-8. [PMID: 26299880 DOI: 10.1016/j.ympev.2015.07.017] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Revised: 07/21/2015] [Accepted: 07/22/2015] [Indexed: 12/27/2022]
Abstract
Comparative phylogeography of widespread species that span the same geographic areas can elucidate the influence of historical events on current patterns of biodiversity, identify patterns of co-vicariance, and therefore aid the understanding of general evolutionary processes. Soil-dwelling animals present characteristics that make them suitable for testing the effect of the palaeogeographical events on their distribution and diversification, such as their low vagility and population structure. In this study, we shed light on the spatial lineage diversification and cladogenesis of two widely-distributed cosmopolitan and invasive earthworms (Aporrectodea rosea and A. trapezoides) in their putative ancestral area of origin, the Western Palearctic, and a few populations in North America. Molecular analyses were conducted on mitochondrial and nuclear markers from 220 (A. rosea) and 198 (A. trapezoides) individuals collected in 56 and 57 localities, respectively. We compared the lineage diversification pattern, genetic variability and cladogenesis in both species. Our findings showed that both species underwent a similar diversification from the Western Mediterranean plates to (i) Northern Europe and (ii) the Iberian Peninsula, establishing their two main lineages. Their diversification was in concordance with the main palaeogeographical events in the Iberian Peninsula and Western Mediterranean, followed by a later colonization of North America from individuals derived exclusively from the Eurosiberian lineage. Their diversification occurred at different times, with the diversification of A. rosea being potentially more ancient. Cladogenesis in both species seems to have been modelled only by the Mediterranean plate shifts, ignoring historical climatic oscillations such as the Messinian salinity crisis. Their high genetic variability, strong population structure, lack of gene flow and stepping-stone-like cladogenesis suggest the existence of different cryptic lineages. Our results may indicate a recurrent event in invasive earthworms within their ancestral distribution areas in the Western Palearctic.
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25
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Domínguez J, Aira M, Breinholt JW, Stojanovic M, James SW, Pérez-Losada M. Underground evolution: new roots for the old tree of lumbricid earthworms. Mol Phylogenet Evol 2015; 83:7-19. [PMID: 25463017 PMCID: PMC4766815 DOI: 10.1016/j.ympev.2014.10.024] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2014] [Revised: 10/01/2014] [Accepted: 10/28/2014] [Indexed: 10/24/2022]
Abstract
Earthworms belonging to the family Lumbricidae are extremely abundant in terrestrial temperate regions. They affect soil properties and nutrient cycling, thus shaping plant community composition and aboveground food webs. Some lumbricids are also model organisms in ecology and toxicology. Despite the intense research efforts dedicated to lumbricids over the last 130years, the evolutionary relationships and taxonomic classification of these organisms are still subject to great debate. Resolution of their systematics is hampered by the structural simplicity of the earthworm body plan and the existence of cryptic species. We sampled 160 earthworm specimens belonging to 84 lumbricid species (28 genera) and 22 Lumbricoidea outgroups, sequenced two nuclear genes, four mitochondrial genes and seven mitochondrial tRNAs and examined 22 morphological characters. We then applied a combination of phylogenetic methods to generate the first robust genus-level phylogeny of the Lumbricidae. Our results show that the current Lumbricidae classification and the underlying hypotheses of character evolution must be revised. Our chronogram suggests that lumbricids emerged in the Lower Cretaceous in the holarctic region and that their diversification has been driven by tectonic processes (e.g. Laurasia split) and geographical isolation. Our chronogram and character reconstruction analysis reveal that spermathecae number does not follow a gradual pattern of reduction and that parthenogenesis arose from sexual relatives multiple times in the group; the same analysis also indicates that both epigeic and anecic earthworms evolved from endogeic ancestors. These findings emphasize the strong and multiple changes to which morphological and ecological characters are subjected, challenging the hypothesis of character stasis in Lumbricidae.
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Affiliation(s)
- Jorge Domínguez
- Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, E-36310, Spain.
| | - Manuel Aira
- Departamento de Ecoloxía e Bioloxía Animal, Universidade de Vigo, E-36310, Spain
| | - Jesse W Breinholt
- Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA
| | - Mirjana Stojanovic
- Institute of Biology and Ecology, Faculty of Science, R. Domanovića 12, 34000 Kragujevac, Serbia
| | - Samuel W James
- Department of Biology, University of Iowa, Iowa City, IA 52242, USA
| | - Marcos Pérez-Losada
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto, Campus Agrário de Vairão, 4485-661 Vairão, Portugal; Computational Biology Institute, George Washington University, Ashburn, VA 20147, USA; Department of Invertebrate Zoology, US National Museum of Natural History, Smithsonian Institution, Washington, DC 20013, USA
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26
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Lenihan J, Kvist S, Fernández R, Giribet G, Ziegler A. A dataset comprising four micro-computed tomography scans of freshly fixed and museum earthworm specimens. Gigascience 2014; 3:6. [PMID: 24839546 DOI: 10.1186/2047-217X-3-6] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2014] [Accepted: 05/01/2014] [Indexed: 01/12/2023] Open
Abstract
Background Although molecular tools are increasingly employed to decipher invertebrate systematics, earthworm (Annelida: Clitellata: ‘Oligochaeta’) taxonomy is still largely based on conventional dissection, resulting in data that are mostly unsuitable for dissemination through online databases. In order to evaluate if micro-computed tomography (μCT) in combination with soft tissue staining techniques could be used to expand the existing set of tools available for studying internal and external structures of earthworms, μCT scans of freshly fixed and museum specimens were gathered. Findings Scout images revealed full penetration of tissues by the staining agent. The attained isotropic voxel resolutions permit identification of internal and external structures conventionally used in earthworm taxonomy. The μCT projection and reconstruction images have been deposited in the online data repository GigaDB and are publicly available for download. Conclusions The dataset presented here shows that earthworms constitute suitable candidates for μCT scanning in combination with soft tissue staining. Not only are the data comparable to results derived from traditional dissection techniques, but due to their digital nature the data also permit computer-based interactive exploration of earthworm morphology and anatomy. The approach pursued here can be applied to freshly fixed as well as museum specimens, which is of particular importance when considering the use of rare or valuable material. Finally, a number of aspects related to the deposition of digital morphological data are briefly discussed.
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Kuiper I, de Deyn GB, Thakur MP, van Groenigen JW. Soil invertebrate fauna affect N2 O emissions from soil. Glob Chang Biol 2013; 19:2814-2825. [PMID: 23625707 DOI: 10.1111/gcb.12232] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2013] [Accepted: 04/09/2013] [Indexed: 06/02/2023]
Abstract
Nitrous oxide (N2 O) emissions from soils contribute significantly to global warming. Mitigation of N2 O emissions is severely hampered by a lack of understanding of its main controls. Fluxes can only partly be predicted from soil abiotic factors and microbial analyses - a possible role for soil fauna has until now largely been overlooked. We studied the effect of six groups of soil invertebrate fauna and tested the hypothesis that all of them increase N2 O emissions, although to different extents. We conducted three microcosm experiments with sandy soil and hay residue. Faunal groups included in our experiments were as follows: fungal-feeding nematodes, mites, springtails, potworms, earthworms and isopods. In experiment I, involving all six faunal groups, N2 O emissions declined with earthworms and potworms from 78.4 (control) to 37.0 (earthworms) or 53.5 (potworms) mg N2 O-N m(-2) . In experiment II, with a higher soil-to-hay ratio and mites, springtails and potworms as faunal treatments, N2 O emissions increased with potworms from 51.9 (control) to 123.5 mg N2 O-N m(-2) . Experiment III studied the effect of potworm density; we found that higher densities of potworms accelerated the peak of the N2 O emissions by 5 days (P < 0.001), but the cumulative N2 O emissions remained unaffected. We propose that increased soil aeration by the soil fauna reduced N2 O emissions in experiment I, whereas in experiment II N2 O emissions were driven by increased nitrogen and carbon availability. In experiment III, higher densities of potworms accelerated nitrogen and carbon availability and N2 O emissions, but did not increase them. Overall, our data show that soil fauna can suppress, increase, delay or accelerate N2 O emissions from soil and should therefore be an integral part of future N2 O studies.
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Affiliation(s)
- Imke Kuiper
- Department of Soil Quality, Wageningen University, Wageningen, The Netherlands
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Trouvé R, Drapela T, Frank T, Hadacek F, Zaller JG. Herbivory of an invasive slug in a model grassland community can be affected by earthworms and mycorrhizal fungi. Biol Fertil Soils 2013; 50:13-23. [PMID: 26069356 PMCID: PMC4459544 DOI: 10.1007/s00374-013-0827-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2013] [Revised: 05/17/2013] [Accepted: 05/30/2013] [Indexed: 06/04/2023]
Abstract
Invasion of non-native species is among the top threats for the biodiversity and functioning of native and agricultural ecosystems worldwide. We investigated whether the herbivory of the slug Arion vulgaris (formerly Arion lusitanicus; Gastropoda), that is listed among the 100 worst alien species in Europe, is affected by soil organisms commonly present in terrestrial ecosystems (i.e. earthworms-Annelida: Lumbricidae and arbuscular mycorrhizal fungi-AMF, Glomerales). We hypothesized that slug herbivory would be affected by soil organisms via altered plant nutrient availability and plant quality. In a greenhouse experiment, we created a simple plant community consisting of a grass, a forb, and a legume species and inoculated these systems with either two earthworm species and/or four AMF taxa. Slugs were introduced after plants were established. Earthworms significantly reduced total slug herbivory in AMF-inoculated plant communities (P = 0.013). Across plant species, earthworms increased leaf total N and secondary metabolites, AMF decreased leaf thickness. Mycorrhizae induced a shift in slug feeding preference from non-legumes to legumes; the grass was generally avoided by slugs. AMF effects on legume herbivory can partly be explained by the AMF-induced increase in total N and decrease in C/N ratio; earthworm effects are less clear as no worm-induced alterations of legume plant chemistry were observed. The presence of earthworms increased average AMF colonization of plant roots by 140 % (P < 0.001). Total shoot mass was significantly increased by AMF (P < 0.001). These data suggest that the feeding behavior of this invasive slug is altered by a belowground control of plant chemical quality and community structure.
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Affiliation(s)
- Raphaël Trouvé
- Institute of Zoology, University of Natural Resources and Life Sciences Vienna, Gregor Mendel Straße 33, 1180 Vienna, Austria
- Agro Paris Tech, Paris Institute of Technology for Life, Food and Environmental Sciences, 14 rue Girardet, CS 14216, 54042 Nancy, France
| | - Thomas Drapela
- Institute of Zoology, University of Natural Resources and Life Sciences Vienna, Gregor Mendel Straße 33, 1180 Vienna, Austria
- Research Institute of Organic Agriculture (FiBL Austria), Seidengasse 33-35/13, 1070 Vienna, Austria
| | - Thomas Frank
- Institute of Zoology, University of Natural Resources and Life Sciences Vienna, Gregor Mendel Straße 33, 1180 Vienna, Austria
| | - Franz Hadacek
- Albrecht-von-Haller Institute, Plant Biochemistry, Georg-August-University of Göttingen, Justus-von-Liebig Weg 11, 370077 Göttingen, Germany
| | - Johann G. Zaller
- Institute of Zoology, University of Natural Resources and Life Sciences Vienna, Gregor Mendel Straße 33, 1180 Vienna, Austria
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Abstract
Earthworms make up the dominant fraction of the biomass of soil animals in most temperate grasslands and have important effects on the structure and function of these ecosystems. We hypothesized that the effects of elevated atmospheric CO2 on soil moisture and plant biomass production would increase earthworm activity, expressed as surface cast production. Using a screen-aided CO2 control facility (open top and open bottom rings), eight 1.2-m2 grassland plots in Switzerland have been maintained since March 1994 at ambient CO2 concentrations (350 μl CO2 l-1) and eight at elevated CO2 (610 μl CO2 l-1). Cumulative earthworm surface cast production measured 40 times over 1 year (April 1995-April 1996) in plots treated with elevated CO2 (2206 g dry mass m-2 year-1) was 35% greater (P<0.05) than that measured in plant communities maintained at ambient CO2 (1633 g dry mass m-2 year-1). At these rates of surface cast production, worms would require about 100 years to egest the equivalent of the amount of soil now found in the Ah horizon (top 15 cm) under current ambient CO2 concentrations, and 75 years under elevated CO2. Elevated atmospheric CO2 had no influence on the seasonality of earthworm activity. Cumulative surface cast production measured over the 7-week period immediately following the 6-week summer dry period in 1995 (no surface casting) was positively correlated (P<0.05) with the mean soil water content calculated over this dry and subsequent wetter period, when viewed across all treatments. However, no correlations were observed with soil temperature or with annual aboveground plant biomass productivity. No CO2-related differences were observed in total nitrogen (Ntot) and organic carbon (Corg) concentration of surface casts, although concentrations of both elements varied seasonally. The CO2-induced increase in earthworm surface casting activity corresponded to a 30% increase of the amount of Ntot (8.9 mg N m-2 vs. 6.9 mg N m-2) and Corg (126 mg C m-2 vs. 94 mg C m-2) egested by the worms in one year. Thus, our results demonstrate an important indirect stimulatory effect of elevated atmospheric CO2 on earthworm activity which may have profound effects on ecosystem function and plant community structure in the long term.
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Affiliation(s)
- John A Arnone Iii
- Botanisches Institut, Universität Basel, Schönbeinstrasse 6, CH-4056 Basel, Switzerland Fax: +41 61 267 35 04; e-mail: , , , , , , CH
| | - Johann G Zaller
- Botanisches Institut, Universität Basel, Schönbeinstrasse 6, CH-4056 Basel, Switzerland Fax: +41 61 267 35 04; e-mail: , , , , , , CH
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