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Wongkaew A, Nakamura SI, Rai H, Yokoyama T, Nakasathien S, Ohkama-Ohtsu N. Phloem-specific overexpression of AtOPT6 alters glutathione, phytochelatin, and cadmium distribution in Arabidopsis thaliana. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 348:112238. [PMID: 39181407 DOI: 10.1016/j.plantsci.2024.112238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 08/19/2024] [Accepted: 08/21/2024] [Indexed: 08/27/2024]
Abstract
The Arabidopsis oligopeptide transporter AtOPT6 is reportedly involved in the long-distance transport of thiol compounds into sink organs. In the present study, transgenic Arabidopsis lines overexpressing AtOPT6 under the control of a phloem-specific promoter, sucrose-proton symporter 2 (pSUC2), were analyzed for thiol and cadmium (Cd) distribution during the reproductive stage, both with and without Cd exposure. Phloem specific AtOPT6-overexpressing lines did not exhibit an evident impact on bolting time. In the absence of Cd exposure, these transgenic lines showed significantly enhanced transport of endogenous glutathione into siliques, accompanied by a reduction in the glutathione content of flowers and roots during the reproductive stage. Additionally, exposure of the roots of the phloem specific AtOPT6-overexpressing lines to Cd altered the distribution of thiol compounds, resulting in an increase in the content of phytochelatins in sink organs, contributing to a significant elevation of Cd contents in reproductive sink. Our findings confirm the crucial role of AtOPT6 in unloading phytochelatin-Cd conjugates from the phloem into sink organ.
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Affiliation(s)
- Arunee Wongkaew
- Department of Agronomy, Faculty of Agriculture, Kasetsart University, Bangkok 10900, Thailand
| | - Shin-Ichi Nakamura
- Department of Bioscience, Tokyo University of Agriculture, Tokyo 156-8502, Japan
| | - Hiroki Rai
- Department of Biological Production, Faculty of Bioresource Sciences, Akita Prefectural University, Akita 010-0195, Japan
| | - Tadashi Yokoyama
- The Faculty of Food and Agricultural Science, Fukushima University, Fukushima 960-1296, Japan
| | - Sutkhet Nakasathien
- Department of Agronomy, Faculty of Agriculture, Kasetsart University, Bangkok 10900, Thailand
| | - Naoko Ohkama-Ohtsu
- Institute of Agriculture, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan; Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan.
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2
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Zhang F, Wang Q, Li H, Zhou Q, Tan Z, Zu X, Yan X, Zhang S, Ninomiya S, Mu Y, Tao S. Study on the Optimal Leaf Area-to-Fruit Ratio of Pear Trees on the Basis of Bearing Branch Girdling and Machine Learning. PLANT PHENOMICS (WASHINGTON, D.C.) 2024; 6:0233. [PMID: 39144673 PMCID: PMC11322523 DOI: 10.34133/plantphenomics.0233] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Accepted: 07/20/2024] [Indexed: 08/16/2024]
Abstract
The leaf area-to-fruit ratio (LAFR) is an important factor affecting fruit quality. Previous studies on LAFR have provided some recommendations for optimal values. However, these recommendations have been quite broad and lack effectiveness during the fruit thinning period. In this study, data on the LAFR and fruit quality of pears at 5 stages were collected by continuously girdling bearing branches throughout the entire fruit development process. Five different clustering algorithms, including KMeans, Agglomerative clustering, Spectral clustering, Birch, and Spectral biclustering, were employed to classify the fruit quality data. Agglomerative clustering yielded the best results when the dataset was divided into 4 clusters. The least squares method was utilized to fit the LAFR corresponding to the best quality cluster, and the optimal LAFR values for 28, 42, 63, 91, and 112 days after flowering were 12.54, 18.95, 23.79, 27.06, and 28.76 dm2 (the corresponding leaf-to-fruit ratio values were 19, 29, 36, 41, and 44, respectively). Furthermore, field verification experiments demonstrated that the optimal LAFR contributed to improving pear fruit quality, and a relatively high LAFR beyond the optimum value did not further increase quality. In summary, we optimized the LAFR of pear trees at different stages and confirmed the effectiveness of the optimal LAFR in improving fruit quality. Our research provides a theoretical basis for managing pear tree fruit load and achieving high-quality, clean fruit production.
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Affiliation(s)
- Fanhang Zhang
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Qi Wang
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Haitao Li
- Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Qinyang Zhou
- Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Zhihao Tan
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Xiaochao Zu
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Xin Yan
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Shaoling Zhang
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Seishi Ninomiya
- Graduate School of Agricultural and Life Sciences,
The University of Tokyo, Tokyo 188-0002, Japan
| | - Yue Mu
- Academy for Advanced Interdisciplinary Studies,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Shutian Tao
- Sanya Institute, College of Horticulture,
Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
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3
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Mahmood A, Wang W, Raza MA, Ali I, Liu B, Liu L, Zhu Y, Tang L, Cao W. Quantifying the Individual and Combined Effects of Short-Term Heat Stress at Booting and Flowering Stages on Nonstructural Carbohydrates Remobilization in Rice. PLANTS (BASEL, SWITZERLAND) 2024; 13:810. [PMID: 38592815 PMCID: PMC10975544 DOI: 10.3390/plants13060810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2024] [Revised: 02/28/2024] [Accepted: 03/04/2024] [Indexed: 04/11/2024]
Abstract
Rice production is threatened by climate change, particularly heat stress (HS). Nonstructural carbohydrates (NSCs) remobilization is a key physiological mechanism that allows rice plants to cope with HS. To investigate the impact of short-term HS on the remobilization of nonstructural carbohydrates (NSCs) in rice, two cultivars (Huaidao-5 and Wuyunjing-24) were subjected to varying temperature regimes: 32/22/27 °C as the control treatment, alongside 40/30/35 °C and 44/34/39 °C, for durations of 2 and 4 days during the booting, flowering, and combined stages (booting + flowering) within phytotrons across the years 2016 and 2017. The findings revealed that the stem's NSC concentration increased, while the panicle's NSCs concentration, the efficiency of NSCs translocation from the stem, and the stem NSC contribution to grain yield exhibited a consistent decline. Additionally, sugar and starch concentrations increased in leaves and stems during late grain filling and maturity stages, while in panicles, the starch concentration decreased and sugar concentration increased. The heat-tolerant cultivar, Wuyunjing-24, exhibited higher panicle NSC accumulation under HS than the heat-sensitive cultivar, Huaidao-5, which had more stem NSC accumulation. The flowering stage was the most vulnerable to HS, followed by the combined and booting stages. Heat degree days (HDDs) were utilized to quantify the effects of HS on NSC accumulation and translocation, revealing that the flowering stage was the most affected. These findings suggest that severe HS makes the stem the primary carbohydrate storage sink, and alleviation under combined HS aids in evaluating NSC accumulation, benefiting breeders in developing heat-tolerant rice varieties.
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Affiliation(s)
- Aqib Mahmood
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
- National Research Centre of Intercropping, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan
| | - Wei Wang
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
| | - Muhammad Ali Raza
- National Research Centre of Intercropping, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan
| | - Iftikhar Ali
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
- Department of Agronomy, University of Agriculture, Faisalabad 38000, Pakistan
| | - Bing Liu
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
| | - Leilei Liu
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
| | - Yan Zhu
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
| | - Liang Tang
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
| | - Weixing Cao
- National Engineering and Technology Center for Information Agriculture, Key Laboratory for Crop System Analysis and Decision Making, Ministry of Agriculture and Rural Affairs, Engineering Research Center for Smart Agriculture, Ministry of Education, Jiangsu Key Laboratory for Information Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agricultural University, Nanjing 210095, China; (A.M.); (W.W.); (I.A.); (B.L.); (Y.Z.)
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Kumar A, Mushtaq M, Kumar P, Sharma DP, Gahlaut V. Insights into flowering mechanisms in apple (Malus × domestica Borkh.) amidst climate change: An exploration of genetic and epigenetic factors. Biochim Biophys Acta Gen Subj 2024; 1868:130593. [PMID: 38408683 DOI: 10.1016/j.bbagen.2024.130593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 01/05/2024] [Accepted: 02/20/2024] [Indexed: 02/28/2024]
Abstract
Apple (Malus × domestica Borkh.) holds a prominent position among global temperate fruit crops, with flowering playing a crucial role in both production and breeding. This review delves into the intricate mechanisms governing apple flowering amidst the backdrop of climate change, acknowledging the profound influence of external and internal factors on biennial bearing, flower bud quality, and ultimately, fruit quality. Notably, the challenge faced in major apple production regions is not an inadequacy of flowers but an excess, leading to compromised fruit quality necessitating thinning practices. Climate change exacerbates these challenges, rendering apple trees more susceptible to crop failure due to unusual weather events, such as reduced winter snowfall, early spring cold weather, and hailstorms during flowering and fruit setting. Altered climatic conditions, exemplified by increased spring warming coupled with sub-freezing temperatures, negatively impact developing flower buds and decrease overall crop production. Furthermore, changing winter conditions affect chilling accumulation, disrupting flower development and synchronicity. Although the physiological perception of apple flowering has been reviewed in the past, the genetic, epigenetic, and multi-omics regulatory mechanisms governing floral induction and flowering are still rarely discussed in the case of apple flowering. This article comprehensively reviews the latest literature encompassing all aspects of apple flowering, aiming to broaden our understanding and address flowering challenges while also laying a solid foundation for future research in developing cultivars that are ideally adapted to climate change.
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Affiliation(s)
- Anshul Kumar
- MS Swaminathan School of Agriculture, Shoolini University, Bhajol, Solan, Himachal Pradesh 173229, India
| | - Muntazir Mushtaq
- MS Swaminathan School of Agriculture, Shoolini University, Bhajol, Solan, Himachal Pradesh 173229, India
| | - Pankaj Kumar
- Department of Biotechnology, Dr. YS Parmar University of Horticulture and Forestry Nauni Solan, Himachal Pradesh 173230, India.
| | - Dharam Paul Sharma
- Department of Fruit Science, Dr. YS Parmar University of Horticulture and Forestry Nauni Solan, Himachal Pradesh 173230, India
| | - Vijay Gahlaut
- University Centre for Research & Development, Chandigarh University, Punjab 140413, India.
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5
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Alikhani-Koupaei M, Ehtesham Nia A. Reducing the sink/source ratio of on-date palm plants during fruit growth has physiological and biochemical impacts on the shift in source-sink limitations. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023; 103:7104-7116. [PMID: 37332084 DOI: 10.1002/jsfa.12795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 05/10/2023] [Accepted: 06/19/2023] [Indexed: 06/20/2023]
Abstract
BACKGROUND The present study examined the impact of reducing the 'sink' on the 'source' in On-palms with a bunch number greater than eight. The capacity of leaves and fruit, as well as assimilate loading and unloading in phloem, restrict plant growth and yield. The study evaluated yield components, as well as photosynthetic and hormonal feedback, resulting from source-sink relationships. RESULTS During the mid-Kimri, removing bunches from On-trees stabilized yield components and fruit size, suggesting that On-trees have a sink limitation. Bunch thinning boosted these indicators compared to normal trees with a bunch number between six and eight inclusive, indicating that On-trees had source limitations. In mid-Khalal, the treatments presented a type of source and sink limitation that is opposite to mid-Kimri. The thinning techniques addressed the source-sink limitation by adjusting the additional carbon allocation. This resulted in an increase of non-reducing sugars and starch in different organs, whereas reducing sugars decreased. These adjustments were made to reduce sucrose-phosphate synthase and sucrose synthase activity, raising invertase activity, lowering indole-3-acetic acid, zeatin, gibberellin, and abscisic acid hormone levels in fruits, as well as lowering trehalose production in organs. Levels of hormones, enzymes, and trehalose showed less variation during bunch thinning and source limitation compared to bunch removal and sink limitation. CONCLUSION At Rutab, thinning types demonstrated the source limitation of On-trees. Bunch removal and bunch thinning by removing the source-sink limitation had the greatest effect on increasing yield components and fruit size, respectively. To improve the quality and quantity of fruit, it is important to use both thinning techniques simultaneously. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Majid Alikhani-Koupaei
- Department of Plant Production Technology, Faculty of Agriculture, Higher Education Complex of Saravan, Saravan, Iran
| | - Abdollah Ehtesham Nia
- Department of Horticultural Sciences, Faculty of Agriculture, Lorestan University, Khorramabad, Iran
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6
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Kuai J, Nie X, Lou H, Li Z, Xie X, Sun Y, Xu Z, Wang J, Wang B, Zhou G. Nitrogen supply alleviates seed yield reduction by improving the morphology and carbon metabolism of pod walls in shaded rapeseed. PHYSIOLOGIA PLANTARUM 2023; 175:e14003. [PMID: 37882291 DOI: 10.1111/ppl.14003] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2023] [Revised: 07/14/2023] [Accepted: 08/08/2023] [Indexed: 10/27/2023]
Abstract
Shading significantly affects rapeseed yield, while reasonable nitrogen (N) application has efficiency gains. However, the functions and mechanisms of N are not fully established for shaded rapeseed plants. Therefore, we conducted a 2-year field experiment to study the effect of N on pod wall morphology and carbon metabolism of shaded rapeseed. Two varieties, three N rates (120 [N1], 240 [N2], and 360 [N3] kg hm-2 ) and two light intensities (100 and 70% light transmission) from 10 to 35 days after the end of flowering were set as experimental parameters. Shading decreased the pod wall chlorophyll content, ribulose 1,5-bisphosphate carboxylase (Rubisco) activity and glucose content at 25 and 35 days after flowering (DAF). Decreased sucrose synthase (SuSy) and sucrose phosphate synthase activity caused by shading reduced sucrose and fructose content. They are responsible for the decline in the 1000-seed weight and a 22.1-37.6% decline in seed yield. More N under shading promoted pod elongation and pigment content, improved chloroplast ultrastructure, increased Rubisco and SuSy activity at 35 DAF, thus contributing to pod wall photosynthesis and fructose and glucose levels in shaded rapeseed plants. Similar trends were observed in pod number, pod weight, and seed weight, while the greatest increase in seed/wall ratio was observed under N2 for shaded rapeseed plants. The results indicated that N can reduce the yield difference between different light conditions and balance partitioning and conversion of photoassimilates in pod wall, but avoid applying an excessive amount of nitrogen.
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Affiliation(s)
- Jie Kuai
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Xiaoyu Nie
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Hongxiang Lou
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Zhen Li
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
- College of Agriculture, Jinhua Polytechnic, Jinhua, Zhejiang Province, China
| | - Xiongze Xie
- Xiangyang Academy of Agricultural Sciences, Xiangyang, Hubei, China
| | - Yingying Sun
- Tai'an Academy of Agricultural Sciences, Tai'an, Shandong, China
| | - Zhenghua Xu
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Jing Wang
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Bo Wang
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
| | - Guangsheng Zhou
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei Province, China
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Kimura K, Miyazaki A, Suzuki T, Yamamoto T, Kitazawa Y, Maejima K, Namba S, Yamaji Y. A Reverse-Transcription Loop-Mediated Isothermal Amplification Technique to Detect Tomato Mottle Mosaic Virus, an Emerging Tobamovirus. Viruses 2023; 15:1688. [PMID: 37632030 PMCID: PMC10459350 DOI: 10.3390/v15081688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2023] [Revised: 07/26/2023] [Accepted: 07/26/2023] [Indexed: 08/27/2023] Open
Abstract
Tomato mottle mosaic virus (ToMMV) is an emerging seed-transmissible tobamovirus that infects tomato and pepper. Since the first report in 2013 in Mexico, ToMMV has spread worldwide, posing a serious threat to the production of both crops. To prevent the spread of this virus, early and accurate detection of infection is required. In this study, we developed a detection method for ToMMV based on reverse-transcription loop-mediated isothermal amplification (RT-LAMP). A LAMP primer set was designed to target the genomic region spanning the movement protein and coat protein genes, which is a highly conserved sequence unique to ToMMV. This RT-LAMP detection method achieved 10-fold higher sensitivity than conventional RT-polymerase chain reaction methods and obtained high specificity without false positives for closely related tobamoviruses or healthy tomato plants. This method can detect ToMMV within 30 min of direct sampling of an infected tomato leaf using a toothpick and therefore does not require RNA purification. Given its high sensitivity, specificity, simplicity, and rapidity, the RT-LAMP method developed in this study is expected to be valuable for point-of-care testing in field surveys and for large-scale testing.
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Affiliation(s)
| | | | | | | | | | | | | | - Yasuyuki Yamaji
- Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo 113-8657, Japan
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Liu Y, Shen K, Yin C, Xu X, Yu X, Ye B, Sun Z, Dong J, Bi A, Zhao X, Xu D, He Z, Zhang X, Hao C, Wu J, Wang Z, Wu H, Liu D, Zhang L, Shen L, Hao Y, Lu F, Guo Z. Genetic basis of geographical differentiation and breeding selection for wheat plant architecture traits. Genome Biol 2023; 24:114. [PMID: 37173729 PMCID: PMC10176713 DOI: 10.1186/s13059-023-02932-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2022] [Accepted: 04/10/2023] [Indexed: 05/15/2023] Open
Abstract
BACKGROUND Plant architecture associated with increased grain yield and adaptation to the local environments is selected during wheat (Triticum aestivum) breeding. The internode length of individual stems and tiller length of individual plants are important for the determination of plant architecture. However, few studies have explored the genetic basis of these traits. RESULTS Here, we conduct a genome-wide association study (GWAS) to dissect the genetic basis of geographical differentiation of these traits in 306 worldwide wheat accessions including both landraces and traditional varieties. We determine the changes of haplotypes for the associated genomic regions in frequency in 831 wheat accessions that are either introduced from other countries or developed in China from last two decades. We identify 83 loci that are associated with one trait, while the remaining 247 loci are pleiotropic. We also find 163 associated loci are under strong selective sweep. GWAS results demonstrate independent regulation of internode length of individual stems and consistent regulation of tiller length of individual plants. This makes it possible to obtain ideal haplotype combinations of the length of four internodes. We also find that the geographical distribution of the haplotypes explains the observed differences in internode length among the worldwide wheat accessions. CONCLUSION This study provides insights into the genetic basis of plant architecture. It will facilitate gene functional analysis and molecular design of plant architecture for breeding.
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Affiliation(s)
- Yangyang Liu
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Kuocheng Shen
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Changbin Yin
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100010, China
| | - Xiaowan Xu
- Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
| | - Xuchang Yu
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Botao Ye
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Zhiwen Sun
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Jiayu Dong
- University of Chinese Academy of Sciences, 100049, Beijing, China
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100010, China
| | - Aoyue Bi
- University of Chinese Academy of Sciences, 100049, Beijing, China
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100010, China
| | - Xuebo Zhao
- University of Chinese Academy of Sciences, 100049, Beijing, China
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100010, China
| | - Daxing Xu
- University of Chinese Academy of Sciences, 100049, Beijing, China
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100010, China
| | - Zhonghu He
- Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
- International Maize and Wheat Improvement Center (CIMMYT) China Office, c/o CAAS, Beijing, 100081, China
| | - Xueyong Zhang
- Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
| | - Chenyang Hao
- Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China
| | - Jianhui Wu
- State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Ziying Wang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - He Wu
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Danni Liu
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, 100049, Beijing, China
| | - Lili Zhang
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Liping Shen
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yuanfeng Hao
- Institute of Crop Sciences, Chinese Academy of Agricultural Sciences (CAAS), Beijing, 100081, China.
| | - Fei Lu
- University of Chinese Academy of Sciences, 100049, Beijing, China.
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100010, China.
- CAS-JIC Centre of Excellence for Plant and Microbial Science (CEPAMS), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
| | - Zifeng Guo
- Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
- University of Chinese Academy of Sciences, 100049, Beijing, China.
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Vaisman M, Hak H, Arazi T, Spiegelman Z. The Impact of Tobamovirus Infection on Root Development Involves Induction of Auxin Response Factor 10a in Tomato. PLANT & CELL PHYSIOLOGY 2023; 63:1980-1993. [PMID: 34977939 DOI: 10.1093/pcp/pcab179] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Revised: 12/16/2021] [Accepted: 01/02/2022] [Indexed: 06/14/2023]
Abstract
Plant viruses cause systemic diseases that severely impair plant growth and development. While the accumulation of viruses in the root system has long been established, little is known as to how viruses affect root architecture. Here, we examined how the emerging tobamovirus, tomato brown rugose fruit virus (ToBRFV), alters root development in tomato. We found that ToBRFV and tobacco mosaic virus both invaded root systems during the first week of infection. ToBRFV infection of tomato plants resulted in a significant decrease in root biomass and elongation and root-to-shoot ratio and a marked suppression of root branching. Mutation in RNA-dependent RNA polymerase 6 increased the susceptibility of tomato plants to ToBRFV, resulting in severe reduction of various root growth parameters including root branching. Viral root symptoms were associated with the accumulation of auxin response factor 10a (SlARF10a) transcript, a homolog of Arabidopsis ARF10, a known suppressor of lateral root development. Interestingly, loss-of-function mutation in SlARF10a moderated the effect of ToBRFV on root branching. In contrast, downregulation of sly-miR160a, which targets SlARF10a, was associated with constitutive suppression root branching independent of viral infection. In addition, overexpression of a microRNA-insensitive mutant of SlARF10a mimicked the effect of ToBRFV on root development, suggesting a specific role for SlARF10a in ToBRFV-mediated suppression of root branching. Taken together, our results provide new insights into the impact of tobamoviruses on root development and the role of ARF10a in the suppression of root branching in tomato.
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Affiliation(s)
- Michael Vaisman
- Department of Plant Pathology and Weed Research, Agricultural Research Organization-The Volcani Institute, 68 HaMaccabim Road, P.O.B 15159, Rishon LeZion 7505101, Israel
- The Robert H. Smith Faculty of Agriculture, Food and Environment, the Hebrew University of Jerusalem, PO Box 12, Rehovot 761001, Israel
| | - Hagit Hak
- Department of Plant Pathology and Weed Research, Agricultural Research Organization-The Volcani Institute, 68 HaMaccabim Road, P.O.B 15159, Rishon LeZion 7505101, Israel
| | - Tzahi Arazi
- Plant Sciences Institute, Agricultural Research Organization, The Volcani Institute, 68 HaMaccabim Road, P.O.B 15159, Rishon LeZion 7505101, Israel
| | - Ziv Spiegelman
- Department of Plant Pathology and Weed Research, Agricultural Research Organization-The Volcani Institute, 68 HaMaccabim Road, P.O.B 15159, Rishon LeZion 7505101, Israel
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10
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Chadee A, Mohammad M, Vanlerberghe GC. Evidence that mitochondrial alternative oxidase respiration supports carbon balance in source leaves of Nicotiana tabacum. JOURNAL OF PLANT PHYSIOLOGY 2022; 279:153840. [PMID: 36265227 DOI: 10.1016/j.jplph.2022.153840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Revised: 10/07/2022] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
Alternative oxidase (AOX) represents a non-energy conserving pathway within the mitochondrial electron transport chain. One potential physiological role of AOX could be to manage leaf carbohydrate amounts by supporting respiratory carbon oxidation reactions. In this study, several approaches tested the hypothesis that AOX1a gene expression in Nicotiana tabacum leaf is enhanced in conditions expected to promote an increased leaf carbohydrate status. These approaches included supplying leaves with exogenous carbohydrates, comparing plants grown at different atmospheric CO2 concentrations, comparing sink leaves with source leaves, comparing plants with different ratios of source to sink activity, and examining gene expression over the diel cycle. In each case, the pattern of AOX1a gene expression was compared with that of other genes known to respond to carbohydrates and/or other factors related to source:sink activity. These included GPT1 and GPT3 (that encode chloroplast glucose 6-phosphate/phosphate translocators), SPS (that encodes sucrose phosphate synthase), SUT1 (that encodes a sucrose/H+ symporter involved in phloem loading) and UCP1 (that encodes a mitochondrial uncoupling protein). The AOX1a transcript amount was higher following the leaf sink-to-source transition, and in plants with higher source relative to sink activity due to increasing plant age. Further, these effects were amplified in plants grown at elevated CO2 to stimulate source activity, particularly at end-of-day time periods. The AOX1a transcript amount was also higher following treatment of leaves with carbohydrate, in particular sucrose. Overall, the results provide evidence that, while source leaf sucrose accumulation may signal for a down-regulation of sucrose synthesis and transport, it also signals for means to manage the excess cytosolic carbohydrate pools. This includes increased AOX respiration to support carbon oxidation pathways even if energy charge is high, in combination perhaps with some return flux of carbohydrate from cytosol to stroma through the GPT3 translocator. As discussed, these activities could contribute to maintaining plant source:sink balance, as well as photosynthetic and phloem loading capacity.
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Affiliation(s)
- Avesh Chadee
- Department of Biological Sciences, And Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C1A4, Canada
| | - Masoom Mohammad
- Department of Biological Sciences, And Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C1A4, Canada
| | - Greg C Vanlerberghe
- Department of Biological Sciences, And Department of Cell and Systems Biology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C1A4, Canada.
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11
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Consequences of the Reproductive Effort of Dioecious Taxus baccata L. Females in a Generative Bud Removal Experiment-Important Role of Nitrogen in Female Reproduction. Int J Mol Sci 2022; 23:ijms232214225. [PMID: 36430702 PMCID: PMC9695432 DOI: 10.3390/ijms232214225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 11/04/2022] [Accepted: 11/15/2022] [Indexed: 11/19/2022] Open
Abstract
Dioecious species differ in the pattern and intensity of male and female reproductive investments. We aimed to determine whether female shoots deprived of generative buds show biochemical features, indicating their less-pronounced reproductive effort. For this purpose, the same branches of mature Taxus baccata females were deprived of generative organs. In the second and third years of the experiment, measurements were made in every season from the control and bud-removed shoots of females and control males. Bud removal caused an increase in nitrogen concentration almost to the level detected in the needles of male specimens, but only in current-year needles. Moreover, differences between male and control female shoots were present in the C:N ratio and increment biomass, but they disappeared when bud removal was applied to females. Additionally, between-sex differences were observed for content of phenolic compounds, carbon and starch, and SLA, independent of the female shoot reproductive effort. The study revealed that nitrogen uptake in seeds and arils may explain the lower nitrogen level and consequently the lower growth rate of females compared to males. At the same time, reproduction did not disturb carbon level in adjacent tissues, and two hypotheses explaining this phenomenon have been put forward.
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12
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Imada S, Tako Y. Seasonal accumulation of photoassimilated carbon relates to growth rate and use for new aboveground organs of young apple trees in following spring. TREE PHYSIOLOGY 2022; 42:2294-2305. [PMID: 35796531 PMCID: PMC9652006 DOI: 10.1093/treephys/tpac072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Accepted: 06/11/2022] [Indexed: 06/15/2023]
Abstract
Deciduous trees accumulate carbon (C) in woody parts during the growth season which is subsequently used for the initial development and growth of newly formed organs in the following season; however, it is unclear which period during the growth season contributes to C accumulation. Three-year-old potted Malus domestica (apple) trees were grown in controlled growth chambers during the growth season and exposed to 13CO2 in an exposure chamber at seven different periods of the growth season, including vegetative and reproductive growth periods. Approximately half of the trees were harvested in late autumn, and the remaining trees were grown in a field in the following year. The 13C accumulation in the different organs in late autumn, and its concentration in the new aboveground growth during the following growth season, was determined. The concentration of the photoassimilated 13C in woody parts (shoots, trunk, rootstock and coarse roots) in the late autumn was higher in the trees labeled during the period of vigorous vegetative growth than in those labeled during other periods of growth. Furthermore, 13C concentration in the leaves, annual shoots, flower buds and flowers in the following early spring was also high in the trees labeled during this period. The concentration of 13C in the flower buds and flowers was positively correlated with that in the woody parts in the late autumn and old shoots in the following spring. Hence, the seasonal accumulation of photoassimilated C in woody parts in late autumn is related to growth rates during the growth season and its use for the initial development of newly formed organs in the following spring. These results suggest that under non-stressed conditions, C accumulated during the period of vigorous vegetative growth largely contributes to the C reserves that are used for the development of new organs in the following year.
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Affiliation(s)
| | - Yasuhiro Tako
- Department of Radioecology, Institute for Environmental Sciences, 1-7 Ienomae, Obuchi, Rokkasho, Kamikita, Aomori 039-3212, Japan
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13
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Patono DL, Said‐Pullicino D, Eloi Alcatrāo L, Firbus A, Ivaldi G, Chitarra W, Ferrandino A, Ricauda Aimonino D, Celi L, Gambino G, Perrone I, Lovisolo C. Photosynthetic recovery in drought-rehydrated grapevines is associated with high demand from the sinks, maximizing the fruit-oriented performance. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 112:1098-1111. [PMID: 36209488 PMCID: PMC9828513 DOI: 10.1111/tpj.16000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 08/20/2022] [Accepted: 10/05/2022] [Indexed: 05/08/2023]
Abstract
To understand how grapevine sinks compete with each other during water stress and subsequent rehydration, carbon (C) allocation patterns in drought-rehydrated vines (REC) at the beginning of fruit ripening were compared with control vines maintained under drought (WS) or fully irrigated (WW). In the 30 days following rehydration, the quantity and distribution of newly fixed C between leaves, roots and fruits was evaluated through 13 CO2 pulse-labeling and stable isotope ratio mass spectrometry. REC plants diverted the same percentage of fixed C towards the berries as the WS plants, although the percentage was higher than that of WW plants. Net photosynthesis (measured simultaneously with root respiration in a multichamber system for analysis of gas exchange above- and below-ground) was approximately two-fold greater in REC compared to WS treatment, and comparable or even higher than in WW plants. Maximizing C assimilation and delivery in REC plants led to a significantly higher amount of newly fixed C compared to both control treatments, already 2 days after rehydration in root, and 2 days later in the berries, in line with the expression of genes responsible for sugar metabolism. In REC plants, the increase in C assimilation was able to support the requests of the sinks during fruit ripening, without affecting the reserves, as was the case in WS. These mechanisms clarify what is experienced in fruit crops, when occasional rain or irrigation events are more effective in determining sugar delivery towards fruits, rather than constant and satisfactory water availabilities.
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Affiliation(s)
- Davide L. Patono
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | - Daniel Said‐Pullicino
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | - Leandro Eloi Alcatrāo
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | - Andrea Firbus
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | - Giorgio Ivaldi
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | - Walter Chitarra
- Institute for Sustainable Plant ProtectionNational Research CouncilTurinItaly
- Council for Agricultural Research and Economics‐Research Centre for Viticulture and Enology (CREA‐VE)ConeglianoItaly
| | - Alessandra Ferrandino
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | | | - Luisella Celi
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
| | - Giorgio Gambino
- Institute for Sustainable Plant ProtectionNational Research CouncilTurinItaly
| | - Irene Perrone
- Institute for Sustainable Plant ProtectionNational Research CouncilTurinItaly
| | - Claudio Lovisolo
- Department of Agricultural, Forest and Food SciencesUniversity of TurinGrugliascoItaly
- Institute for Sustainable Plant ProtectionNational Research CouncilTurinItaly
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14
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Plavcová L, Mészáros M, Šilhán K, Jupa R. Relationships between trunk radial growth and fruit yield in apple and pear trees on size-controlling rootstocks. ANNALS OF BOTANY 2022; 130:477-489. [PMID: 35788818 PMCID: PMC9510948 DOI: 10.1093/aob/mcac089] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Accepted: 06/29/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND AND AIMS Understanding the mutual co-ordination of vegetative and reproductive growth is important in both agricultural and ecological settings. A competitive relationship between vegetative growth and fruiting is often highlighted, resulting in an apparent trade-off between structural growth and fruit production. However, our understanding of factors driving this relationship is limited. METHODS We used four scions grafted onto a series of size-controlling rootstocks to evaluate the relationships between the annual fruit yield and radial growth of trunks, branches and roots. To assess tree radial growth, we measured ring widths on extracted tree cores, which is an approach not frequently used in a horticultural setting. KEY RESULTS We found that the yield and radial growth were negatively related when plotted in absolute terms or as detrended and normalized indices. The relationship was stronger in low vigour trees, but only after the age-related trend was removed. In contrast, when trunk radial growth was expressed as basal area increment, the negative relationship disappeared, suggesting that the relationship between trunk radial growth and fruit yield might not be a true trade-off related to the competition between the two sinks. The effect of low yield was associated with increased secondary growth not only in trunks but also in branches and roots. In trunks, we observed that overcropping was associated with reduced secondary growth in a subsequent year, possibly due to the depletion of reserves. CONCLUSIONS Our results show that variation in annual fruit yield due to tree ageing, weather cueing and inherent alternate bearing behaviour is reflected in the magnitude of secondary growth of fruit trees. We found little support for the competition/architecture theory of rootstock-induced growth vigour control. More broadly, our study aimed at bridging the gap between forest ecology and horticulture.
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Affiliation(s)
| | - Martin Mészáros
- Research and Breeding Institute of Pomology, Holovousy, Hořice, Czech Republic
| | - Karel Šilhán
- Department of Biology, Faculty of Science, University of Hradec Králové, Rokitanského, Hradec Králové, Czech Republic
| | - Radek Jupa
- Department of Biology, Faculty of Science, University of Hradec Králové, Rokitanského, Hradec Králové, Czech Republic
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15
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Morin A, Maurousset L, Vriet C, Lemoine R, Doidy J, Pourtau N. Carbon fluxes and environmental interactions during legume development, with a specific focus on Pisum sativum. PHYSIOLOGIA PLANTARUM 2022; 174:e13729. [PMID: 35662039 PMCID: PMC9328368 DOI: 10.1111/ppl.13729] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 05/25/2022] [Accepted: 06/01/2022] [Indexed: 06/15/2023]
Abstract
Grain legumes are major food crops cultivated worldwide for their seeds with high nutritional content. To answer the growing concern about food safety and protein autonomy, legume cultivation must increase in the coming years. In parallel, current agricultural practices are facing environmental challenges, including global temperature increase and more frequent and severe episodes of drought stress. Crop yield directly relies on carbon allocation and is particularly affected by these global changes. We review the current knowledge on source-sink relationships and carbon resource allocation at all developmental stages, from germination to vegetative growth and seed production in grain legumes, focusing on pea (Pisum sativum). We also discuss how these source-sink relationships and carbon fluxes are influenced by biotic and abiotic factors. Major agronomic traits, including seed yield and quality, are particularly impacted by drought, temperatures, salinity, waterlogging, or pathogens and can be improved through the promotion of beneficial soil microorganisms or through optimized plant carbon resource allocation. Altogether, our review highlights the need for a better understanding of the cellular and molecular mechanisms regulating carbon fluxes from source leaves to sink organs, roots, and seeds. These advancements will further improve our understanding of yield stability and stress tolerance and contribute to the selection of climate-resilient crops.
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Affiliation(s)
- Amélie Morin
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Laurence Maurousset
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Cécile Vriet
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Rémi Lemoine
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Joan Doidy
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Nathalie Pourtau
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
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16
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Wu P, Zhang L, Zhang K, Yin Y, Liu A, Zhu Y, Fu Y, Sun F, Zhao S, Feng K, Xu X, Chen X, Cheng F, Li L. The adaptive evolution of Euryale ferox to the aquatic environment through paleo-hexaploidization. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 110:627-645. [PMID: 35218099 PMCID: PMC9314984 DOI: 10.1111/tpj.15717] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2021] [Revised: 01/24/2022] [Accepted: 02/20/2022] [Indexed: 05/25/2023]
Abstract
Occupation of living space is one of the main driving forces of adaptive evolution, especially for aquatic plants whose leaves float on the water surface and thus have limited living space. Euryale ferox, from the angiosperm basal family Nymphaeaceae, develops large, rapidly expanding leaves to compete for space on the water surface. Microscopic observation found that the cell proliferation of leaves is almost completed underwater, while the cell expansion occurs rapidly after they grow above water. To explore the mechanism underlying the specific development of leaves, we performed sequences assembly and analyzed the genome and transcriptome dynamics of E. ferox. Through reconstruction of the three sub-genomes generated from the paleo-hexaploidization event in E. ferox, we revealed that one sub-genome was phylogenetically closer to Victoria cruziana, which also exhibits gigantic floating leaves. Further analysis revealed that while all three sub-genomes promoted the evolution of the specific leaf development in E. ferox, the genes from the sub-genome closer to V. cruziana contributed more to this adaptive evolution. Moreover, we found that genes involved in cell proliferation and expansion, photosynthesis, and energy transportation were over-retained and showed strong expression association with the leaf development stages, such as the expression divergence of SWEET orthologs as energy uploaders and unloaders in the sink and source leaf organs of E. ferox. These findings provide novel insights into the genome evolution through polyploidization, as well as the adaptive evolution regarding the leaf development accomplished through biased gene retention and expression sub-functionalization of multi-copy genes in E. ferox.
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Affiliation(s)
- Peng Wu
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of the Ministry of Agriculture, Sino‐Dutch Joint Laboratory of Horticultural GenomicsBeijing100081China
| | - Lingkui Zhang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of the Ministry of Agriculture, Sino‐Dutch Joint Laboratory of Horticultural GenomicsBeijing100081China
| | - Kang Zhang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of the Ministry of Agriculture, Sino‐Dutch Joint Laboratory of Horticultural GenomicsBeijing100081China
| | - Yulai Yin
- Suzhou Academy of Agricultural ScienceSuzhou215000China
| | - Ailian Liu
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Yue Zhu
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Yu Fu
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Fangfang Sun
- Suzhou Academy of Agricultural ScienceSuzhou215000China
| | - Shuping Zhao
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Kai Feng
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Xuewen Xu
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Xuehao Chen
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
| | - Feng Cheng
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops of the Ministry of Agriculture, Sino‐Dutch Joint Laboratory of Horticultural GenomicsBeijing100081China
| | - Liangjun Li
- School of Horticulture and Plant ProtectionYangzhou UniversityYangzhou225000China
- Joint International Research Laboratory of Agriculture and Agri‐Product Safety of Ministry of Education of ChinaYangzhou UniversityYangzhou225000China
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17
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Yadav MR, Choudhary M, Singh J, Lal MK, Jha PK, Udawat P, Gupta NK, Rajput VD, Garg NK, Maheshwari C, Hasan M, Gupta S, Jatwa TK, Kumar R, Yadav AK, Prasad PVV. Impacts, Tolerance, Adaptation, and Mitigation of Heat Stress on Wheat under Changing Climates. Int J Mol Sci 2022; 23:2838. [PMID: 35269980 PMCID: PMC8911405 DOI: 10.3390/ijms23052838] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Revised: 02/21/2022] [Accepted: 02/25/2022] [Indexed: 12/14/2022] Open
Abstract
Heat stress (HS) is one of the major abiotic stresses affecting the production and quality of wheat. Rising temperatures are particularly threatening to wheat production. A detailed overview of morpho-physio-biochemical responses of wheat to HS is critical to identify various tolerance mechanisms and their use in identifying strategies to safeguard wheat production under changing climates. The development of thermotolerant wheat cultivars using conventional or molecular breeding and transgenic approaches is promising. Over the last decade, different omics approaches have revolutionized the way plant breeders and biotechnologists investigate underlying stress tolerance mechanisms and cellular homeostasis. Therefore, developing genomics, transcriptomics, proteomics, and metabolomics data sets and a deeper understanding of HS tolerance mechanisms of different wheat cultivars are needed. The most reliable method to improve plant resilience to HS must include agronomic management strategies, such as the adoption of climate-smart cultivation practices and use of osmoprotectants and cultured soil microbes. However, looking at the complex nature of HS, the adoption of a holistic approach integrating outcomes of breeding, physiological, agronomical, and biotechnological options is required. Our review aims to provide insights concerning morpho-physiological and molecular impacts, tolerance mechanisms, and adaptation strategies of HS in wheat. This review will help scientific communities in the identification, development, and promotion of thermotolerant wheat cultivars and management strategies to minimize negative impacts of HS.
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Affiliation(s)
- Malu Ram Yadav
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - Mukesh Choudhary
- School of Agriculture and Environment, The University of Western Australia, Perth 6009, Australia;
| | - Jogendra Singh
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - Milan Kumar Lal
- Division of Crop Physiology, Biochemistry and Post-Harvest Technology, Indian Council of Agricultural Research (ICAR)-Central Potato Research Institute, Shimla 171001, India;
| | - Prakash Kumar Jha
- Feed the Future Innovation Lab for Collaborative Research on Sustainable Intensification, Kansas State University, Manhattan, KS 66506, USA;
| | - Pushpika Udawat
- Janardan Rai Nagar Rajasthan Vidyapeeth, Udaipur 313001, India;
| | - Narendra Kumar Gupta
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - Vishnu D. Rajput
- Academy of Biology and Biotechnology, Southern Federal University, 344090 Rostov-on-Don, Russia;
| | - Nitin Kumar Garg
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - Chirag Maheshwari
- Division of Biochemistry, Indian Council of Agricultural Research, Indian Agricultural Research Institute, New Delhi 110012, India;
| | - Muzaffar Hasan
- Division of Agro Produce Processing, Central Institute of Agricultural Engineering, Bhopal 462038, India;
| | - Sunita Gupta
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - Tarun Kumar Jatwa
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - Rakesh Kumar
- Division of Agronomy, Indian Council of Agricultural Research, National Dairy Research Institute, Karnal 132001, India;
| | - Arvind Kumar Yadav
- Division of Agronomy, Rajasthan Agricultural Research Institute, Sri Karan Narendra Agriculture University, Jobner, Jaipur 303329, India; (M.R.Y.); (J.S.); (N.K.G.); (N.K.G.); (S.G.); (T.K.J.); (A.K.Y.)
| | - P. V. Vara Prasad
- Feed the Future Innovation Lab for Collaborative Research on Sustainable Intensification, Kansas State University, Manhattan, KS 66506, USA;
- Department of Agronomy, Kansas State University, Manhattan, KS 66506, USA
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18
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Jupa R, Mészáros M, Hoch G, Plavcová L. Trunk radial growth, water and carbon relations of mature apple trees on two size-controlling rootstocks during severe summer drought. TREE PHYSIOLOGY 2022; 42:289-303. [PMID: 34409459 DOI: 10.1093/treephys/tpab111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 08/09/2021] [Indexed: 06/13/2023]
Abstract
The use of size-controlling rootstocks is central to modern high-density fruit production systems. While biological mechanisms responsible for vigor control are not fully understood, differences in water relations and carbohydrate storage ability have been suggested as two potential factors. To better understand the processes that control growth vigor, we analyzed the trunk radial variation at seasonal and diurnal timescales and measured the midday leaf water potential (ΨMD), leaf gas exchange and concentrations of non-structural carbohydrates (NSC) in apple trees of variety 'Jonagold' grafted on two rootstocks of contrasting growth vigor (dwarfing J-TE-G vs invigorating J-TE-H). The measurements were conducted during an exceptionally hot and dry summer. We found that smaller annual trunk radial increments in dwarfed trees were primarily due to an earlier cessation of trunk secondary growth. The interdiurnal trunk circumference changes (ΔC) were slightly lower in dwarfed trees, and these trees also had fewer days with positive ΔC values, particularly during the driest summer months. The trunks of dwarfed trees shrank gradually during the drought, showed less pronounced diurnal variation of trunk circumference and the maximum trunk daily shrinkage was only weakly responsive to the vapor pressure deficit. These results indicated that lower turgidity in the cambial region may have limited the trunk radial expansion in dwarfed trees during the hot and dry days. Dwarfed trees also maintained lower ΨMD and leaf gas exchange rates during the summer drought. These parameters decreased in parallel for both rootstock combinations, suggesting their similar drought sensitivity. Similar concentrations and seasonal dynamics of NSC in both rootstock combinations, together with their similar spring growth rates, suggest that NSC reserves were not directly limiting for growth. Our results support the prominent role of water relations in rootstock-induced size-controlling mechanisms and highlight the complexity of this topic.
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Affiliation(s)
- Radek Jupa
- Department of Biology, Faculty of Science, University of Hradec Králové, Rokitanského 62, Hradec Králové CZ-500 03, Czech Republic
| | - Martin Mészáros
- Department of Technology, Research and Breeding Institute of Pomology, Research and Breeding Institute of Pomology, Holovousy 129, Hořice CZ-508 01, Czech Republic
| | - Günter Hoch
- Department of Environmental Sciences - Botany, University of Basel, Schönbeinstrasse 6, 4056 Basel, Switzerland
| | - Lenka Plavcová
- Department of Biology, Faculty of Science, University of Hradec Králové, Rokitanského 62, Hradec Králové CZ-500 03, Czech Republic
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Spies FP, Raineri J, Miguel VN, Cho Y, Hong JC, Chan RL. The Arabidopsis transcription factors AtPHL1 and AtHB23 act together promoting carbohydrate transport from pedicel-silique nodes to seeds. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 315:111133. [PMID: 35067303 DOI: 10.1016/j.plantsci.2021.111133] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 10/29/2021] [Accepted: 11/24/2021] [Indexed: 06/14/2023]
Abstract
Carbohydrates are produced in green tissues through photosynthesis and then transported to sink tissues. Carbon partitioning is a strategic process, fine regulated, involving specific sucrose transporters in each connecting tissue. Here we report that a screening of an Arabidopsis transcription factor (TF) library using the homeodomain-leucine zipper I member AtHB23 as bait, allowed identifying the TF AtPHL1 interacting with the former. An independent Y2H assay, and in planta by BiFC, confirmed such interaction. AtHB23 and AtPHL1 coexpressed in the pedicel-silique nodes and the funiculus. Mutant plants (phl1, and amiR23) showed a marked reduction of lipid content in seeds, although lipid composition did not change compared to the wild type. While protein and carbohydrate contents were not significantly different between mutants and control mature seeds, we observed a reduced carbohydrate content in mutant plants young siliques (7 days after pollination). Moreover, using a CFDA probe, we revealed an impaired transport to the seeds, and the gene encoding the carbohydrate transporters SWEET10 and SWEET11, usually expressed in connecting tissues, was repressed in the amiR23 and phl1 mutant plants. Altogether, the results indicated that AtHB23 and AtPHL1 act together, promoting sucrose transport, and the lack of any of them provoked a reduction in seeds lipid content.
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Affiliation(s)
- Fiorella Paola Spies
- Instituto de Agrobiotecnología del Litoral, CONICET, Universidad Nacional del Litoral, Colectora Ruta Nacional 168 km 0, 3000, Santa Fe, Argentina.
| | - Jesica Raineri
- Instituto de Agrobiotecnología del Litoral, CONICET, Universidad Nacional del Litoral, Colectora Ruta Nacional 168 km 0, 3000, Santa Fe, Argentina.
| | - Virginia Natalí Miguel
- Instituto de Agrobiotecnología del Litoral, CONICET, Universidad Nacional del Litoral, Colectora Ruta Nacional 168 km 0, 3000, Santa Fe, Argentina.
| | - Yuhan Cho
- Division of Life Science, Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, Gyeongnam, 52828, Republic of Korea.
| | - Jong Chan Hong
- Division of Life Science, Applied Life Science (BK21 Plus Program), Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, Gyeongnam, 52828, Republic of Korea; Division of Plant Sciences, University of Missouri, Columbia, MO, 65211-7310, USA.
| | - Raquel L Chan
- Instituto de Agrobiotecnología del Litoral, CONICET, Universidad Nacional del Litoral, Colectora Ruta Nacional 168 km 0, 3000, Santa Fe, Argentina.
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Abeysinghe SK, Greer DH, Rogiers SY. Interaction effects of temperature and light on shoot architecture, growth dynamics and gas exchange of young Vitis vinifera cv. Shiraz vines in controlled environment conditions. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 49:54-67. [PMID: 34794544 DOI: 10.1071/fp21271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2020] [Accepted: 10/18/2021] [Indexed: 06/13/2023]
Abstract
To examine the interactive effect of temperature and photon flux density (PFD) on growth dynamics and gas exchange of young Vitis vinifera L. cv. Shiraz vines, a controlled environment study was conducted by exposing vines to two different temperatures combined with either high or low PFD. Shoot growth was accelerated and the phyllochron of Shiraz leaves was hastened in the low temperature (25/12°C)×low PFD condition (350μmolm-2s-1). In early emerging leaves, leaf area was responsive to temperature whereas in later emerging leaves it was dependent on light intensity. The high temperature (32/20°C)×high PFD (700μmolm-2s-1) treatment delayed internode extension of early emerging internodes. However, low temperature×high PFD increased leaf gas exchange across the different growth stages. The net shoot carbon balance was greater for the low temperature×high PFD treatment. Dry matter accumulation was also greater in early emerging internodes irrespective of treatment. These results on young Shiraz vines indicate that 25°C is favourable to 32°C, and some growth characteristics are accelerated at low PFD while others favour higher PFD.
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Affiliation(s)
- Subhashini K Abeysinghe
- National Wine and Grape Industry Centre, Charles Sturt University, Locked Bag 588, Wagga Wagga, NSW 2678, Australia
| | - Dennis H Greer
- National Wine and Grape Industry Centre, Charles Sturt University, Locked Bag 588, Wagga Wagga, NSW 2678, Australia
| | - Suzy Y Rogiers
- National Wine and Grape Industry Centre, Charles Sturt University, Locked Bag 588, Wagga Wagga, NSW 2678, Australia
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21
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Fermaniuk C, Fleurial KG, Wiley E, Landhäusser SM. Large seasonal fluctuations in whole-tree carbohydrate reserves: is storage more dynamic in boreal ecosystems? ANNALS OF BOTANY 2021; 128:943-957. [PMID: 34293090 PMCID: PMC8577199 DOI: 10.1093/aob/mcab099] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Accepted: 07/21/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND AND AIMS Carbon reserves are a critical source of energy and substrates that allow trees to cope with periods of minimal carbon gain and/or high carbon demands, conditions which are prevalent in high-latitude forests. However, we have a poor understanding of carbon reserve dynamics at the whole-tree level in mature boreal trees. We therefore sought to quantify the seasonal changes in whole-tree and organ-level carbon reserve pools in mature boreal Betula papyrifera. METHODS Non-structural carbohydrate (NSC; soluble sugars and starch) tissue concentrations were measured at key phenological stages throughout a calendar year in the roots, stem (inner bark and xylem), branches and leaves, and scaled up to estimate changes in organ and whole-tree NSC pool sizes. Fine root and stem growth were also measured to compare the timing of growth processes with changes in NSC pools. KEY RESULTS The whole-tree NSC pool increased from its spring minimum to its maximum at bud set, producing an average seasonal fluctuation of 0.96 kg per tree. This fluctuation represents a 72 % change in the whole-tree NSC pool, which greatly exceeds the relative change reported for more temperate conspecifics. At the organ level, branches accounted for roughly 48-60 % of the whole-tree NSC pool throughout the year, and their seasonal fluctuation was four to eight times greater than that observed in the stemwood, coarse roots and inner bark. CONCLUSIONS Branches in boreal B. papyrifera were the largest and most dynamic storage pool, suggesting that storage changes at the branch level largely drive whole-tree storage dynamics in these trees. The greater whole-tree seasonal NSC fluctuation in boreal vs. temperate B. papyrifera may result from (1) higher soluble sugar concentration requirements in branches for frost protection, and/or (2) a larger reliance on reserves to fuel new leaf and shoot growth in the spring.
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Affiliation(s)
- C Fermaniuk
- Department of Renewable Resources, University of Alberta, Edmonton, AB, Canada
| | - K G Fleurial
- Department of Renewable Resources, University of Alberta, Edmonton, AB, Canada
| | - E Wiley
- Department of Biology, University of Central Arkansas, Conway, AR, USA
| | - S M Landhäusser
- Department of Renewable Resources, University of Alberta, Edmonton, AB, Canada
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Wang JY, Alseekh S, Xiao T, Ablazov A, Perez de Souza L, Fiorilli V, Anggarani M, Lin PY, Votta C, Novero M, Jamil M, Lanfranco L, Hsing YIC, Blilou I, Fernie AR, Al-Babili S. Multi-omics approaches explain the growth-promoting effect of the apocarotenoid growth regulator zaxinone in rice. Commun Biol 2021; 4:1222. [PMID: 34697384 PMCID: PMC8545949 DOI: 10.1038/s42003-021-02740-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Accepted: 09/24/2021] [Indexed: 11/19/2022] Open
Abstract
The apocarotenoid zaxinone promotes growth and suppresses strigolactone biosynthesis in rice. To shed light on the mechanisms underlying its growth-promoting effect, we employed a combined omics approach integrating transcriptomics and metabolomics analysis of rice seedlings treated with zaxinone, and determined the resulting changes at the cellular and hormonal levels. Metabolites as well as transcripts analysis demonstrate that zaxinone application increased sugar content and triggered glycolysis, the tricarboxylic acid cycle and other sugar-related metabolic processes in rice roots. In addition, zaxinone treatment led to an increased root starch content and induced glycosylation of cytokinins. The transcriptomic, metabolic and hormonal changes were accompanied by striking alterations of roots at cellular level, which showed an increase in apex length, diameter, and the number of cells and cortex cell layers. Remarkably, zaxinone did not affect the metabolism of roots in a strigolactone deficient mutant, suggesting an essential role of strigolactone in the zaxinone growth-promoting activity. Taken together, our results unravel zaxinone as a global regulator of the transcriptome and metabolome, as well as of hormonal and cellular composition of rice roots. Moreover, they suggest that zaxinone promotes rice growth most likely by increasing sugar uptake and metabolism, and reinforce the potential of this compound in increasing rice performance. Wang et al. report zaxinone as a global regulator of the transcriptome and metabolome, as well as of hormonal and cellular composition of rice roots. This study shows that zaxinone promotes rice growth by enhancing root sugar uptake and metabolism and modulation of cytokinin content, indicating the potential application of this compound in increasing rice performance.
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Affiliation(s)
- Jian You Wang
- The BioActives Lab, Center for Desert Agriculture (CDA), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Saleh Alseekh
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.,Center of Plant Systems Biology and Biotechnology, 4000, Plovdiv, Bulgaria
| | - Tingting Xiao
- The Laboratory of Plant Cell and Developmental Biology (LPCDB), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Abdugaffor Ablazov
- The BioActives Lab, Center for Desert Agriculture (CDA), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Leonardo Perez de Souza
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Valentina Fiorilli
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Marita Anggarani
- Institute of Plant and Microbial Biology, Academia Sinica, No. 128, Section 2, Yien-Chu-Yuan Road, Taipei, 11529, Taiwan
| | - Pei-Yu Lin
- The BioActives Lab, Center for Desert Agriculture (CDA), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Cristina Votta
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Mara Novero
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Muhammad Jamil
- The BioActives Lab, Center for Desert Agriculture (CDA), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Luisa Lanfranco
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Yue-Ie C Hsing
- Institute of Plant and Microbial Biology, Academia Sinica, No. 128, Section 2, Yien-Chu-Yuan Road, Taipei, 11529, Taiwan
| | - Ikram Blilou
- The Laboratory of Plant Cell and Developmental Biology (LPCDB), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany
| | - Salim Al-Babili
- The BioActives Lab, Center for Desert Agriculture (CDA), Biological and Environment Science and Engineering (BESE), King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia.
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Ledermann L, Daouda S, Gouttesoulard C, Aarrouf J, Urban L. Flashes of UV-C Light Stimulate Defenses of Vitis vinifera L. 'Chardonnay' Against Erysiphe necator in Greenhouse and Vineyard Conditions. PLANT DISEASE 2021; 105:2106-2113. [PMID: 33393363 DOI: 10.1094/pdis-10-20-2229-re] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Using detached leaves, UV-C light in the form of 1-s flashes has recently been shown to stimulate defenses of several plants against different pathogens better than 1-min exposures under greenhouse conditions. In the present work, the pathological tests were conducted using undetached leaves under greenhouse and vineyard conditions. In a first trial, two flashes of UV-C light were applied to plants of Vitis vinifera L. 'Chardonnay' grown under greenhouse conditions, at an interval of 10 days. Plants were inoculated with Erysiphe necator 2 days after the last light treatment. After 18 days of inoculation, the symptom severity on leaves was reduced by 60% when compared with the untreated control. In a second trial, flashes of UV-C light were applied to grapevine Chardonnay plants under field conditions in the southeast of France every 10 days from 18 April until 10 July 2019. The symptom severity resulting from natural contaminations by E. necator was reduced by 42% in leaves on 4 July 2019 and by 65% in clusters on 25 July 2019. In a third trial, we observed that UV-C light did not have any effect on net photosynthesis, maximal net photosynthesis, dark respiration, maximal quantum efficiency of photosystem II, the performance index of Strasser, and, generally, any parameter derived from induction curves of maximal chlorophyll fluorescence. It was concluded that flashes of UV-C light have true potential for stimulating plant defenses against E. necator under vineyard conditions and, therefore, help in reducing fungicide use.
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Affiliation(s)
- Loïc Ledermann
- UMR Qualisud, Avignon Université, France
- UV Boosting, Boulogne-Billancourt, France
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24
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Rahman H, Kebede B. Mapping of seed quality traits in the C genome of Brassica napus by using a population carrying genome content of B. oleracea and their effect on other traits. THE PLANT GENOME 2021; 14:e20078. [PMID: 33818008 DOI: 10.1002/tpg2.20078] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Accepted: 11/21/2020] [Indexed: 06/12/2023]
Abstract
Increasing seed oil and protein contents and reducing the content of seed glucosinolates (GSLs) in Brassica oilseed crops are important objectives in breeding. By using an oilseed rape (B. napus L.) doubled-haploid (DH) population carrying genome content introgressed from Chinese kale (B. oleracea L.), we mapped quantitative trait loci (QTL) for these seed quality traits and investigated their effect on other traits including seed yield. A stable QTL for seed oil content was identified on chromosome C5 at 40-42 Mb position and a QTL for seed GSL content was identified on C9 at 7-8 Mb position. The C5 and C9 QTL alleles for high oil and GSL contents were derived from Chinese kale, demonstrating that high-oil QTL allele can be found in the parental species of oilseed rape. The low-GSL QTL allele of C9 exerted a significant positive effect on seed protein content, demonstrating that selection for this QTL allele contributed to higher protein content in canola seed. These two QTL were not affected by field environmental conditions and did not exert a significant effect on days to flowering and seed yield. Thus, the genomic regions and the molecular markers identified in this study should be useful in molecular breeding of the seed quality traits in oilseed rape.
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Affiliation(s)
- Habibur Rahman
- Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2P5, Canada
| | - Berisso Kebede
- Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2P5, Canada
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Li Y, Liu H, Yao X, Wang J, Feng S, Sun L, Ma S, Xu K, Chen LQ, Sui X. Hexose transporter CsSWEET7a in cucumber mediates phloem unloading in companion cells for fruit development. PLANT PHYSIOLOGY 2021; 186:640-654. [PMID: 33604597 PMCID: PMC8154047 DOI: 10.1093/plphys/kiab046] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Accepted: 01/14/2021] [Indexed: 05/20/2023]
Abstract
In the fleshy fruit of cucumbers (Cucumis sativus L.), the phloem flow is unloaded via an apoplasmic pathway, which requires protein carriers to export sugars derived from stachyose and raffinose into the apoplasm. However, transporter(s) involved in this process remain unidentified. Here, we report that a hexose transporter, CsSWEET7a (Sugar Will Eventually be Exported Transporter 7a), was highly expressed in cucumber sink tissues and localized to the plasma membrane in companion cells of the phloem. Its expression level increased gradually during fruit development. Down-regulation of CsSWEET7a by RNA interference (RNAi) resulted in smaller fruit size along with reduced soluble sugar levels and reduced allocation of 14C-labelled carbon to sink tissues. CsSWEET7a overexpression lines showed an opposite phenotype. Interestingly, genes encoding alkaline α-galactosidase (AGA) and sucrose synthase (SUS) were also differentially regulated in CsSWEET7a transgenic lines. Immunohistochemical analysis demonstrated that CsAGA2 co-localized with CsSWEET7a in companion cells, indicating cooperation between AGA and CsSWEET7a in fruit phloem unloading. Our findings indicated that CsSWEET7a is involved in sugar phloem unloading in cucumber fruit by removing hexoses from companion cells to the apoplasmic space to stimulate the raffinose family of oligosaccharides (RFOs) metabolism so that additional sugars can be unloaded to promote fruit growth. This study also provides a possible avenue towards improving fruit production in cucumber.
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Affiliation(s)
- Yaxin Li
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
- Department of Plant Biology, School of Integrative Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
| | - Huan Liu
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Xuehui Yao
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Jiang Wang
- Department of Plant Biology, School of Integrative Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
| | - Sheng Feng
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Lulu Sun
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Si Ma
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Kang Xu
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
| | - Li-Qing Chen
- Department of Plant Biology, School of Integrative Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA
| | - Xiaolei Sui
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing 100193, China
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Effects of cultivar, fruit presence and tree age on whole-plant dry matter partitioning in young olive trees. Heliyon 2021; 7:e06949. [PMID: 34013085 PMCID: PMC8113714 DOI: 10.1016/j.heliyon.2021.e06949] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 04/20/2021] [Accepted: 04/27/2021] [Indexed: 11/24/2022] Open
Abstract
This study investigated the effects of cultivar, fruit presence and tree age on whole-plant partitioning of dry matter and energy equivalents (i.e., glucose equivalents). Young trees of two cultivars characterized by different vigor (i.e., Arbequina, low vigor and Frantoio, high vigor) were either completely deflowered from 2014 to 2017 or never, providing two contrasting levels of cumulated reproductive growth over the following 4 years. Total vegetative dry matter growth over the 4 years was assessed by destructive samplings (whole tree). Plant growth was inversely correlated to reproductive efforts, with Arbequina producing more and growing less than Frantoio. Deflowered trees grew similarly across cultivars, although deflowered Arbequina grew statistically less than deflowered Frantoio by the fourth year, due to abundant flower production. Total reproductive (flowers + fruit) and vegetative biomass production were the same for all cultivars and treatments. Arbequina had a greater distribution of dry matter in directly productive structures (current and one-year-old shoots) and in leaves. This allows it to increase the number of current and following-year production sites, and to save in the resources invested in non-productive sinks (roots, trunk and branches), thus liberating resources for reproductive growth. Greater investments in leaves allow it to intercept more light and thus to increase assimilation. Increased assimilation and increased partitioning towards productive structures, and decreased competition by non-productive structures might contribute to explain the greater early bearing attitude of this cultivar.
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27
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Wang S, van Dijk J, de Boer HJ, Wassen MJ. Source and sink activity of Holcus lanatus in response to absolute and relative supply of nitrogen and phosphorus. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:493-502. [PMID: 33453753 DOI: 10.1071/fp20118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Accepted: 12/10/2020] [Indexed: 06/12/2023]
Abstract
Mineral nutrients influence photosynthesis and tissue formation; a shift from nitrogen (N)-limited to phosphorus (P)-limited growth induced by high N deposition may change plant growth in terms of physiology and morphology. This experiment showed that absolute and relative N and P supply affected net photosynthesis (source activity) and biomass formation (sink activity), and the relationship between source and sink activities of Holcus lanatus L. under various nutrient treatments. H. lanatus was grown at three N:P ratios (5, 15, 45) with two absolute supply levels of N and P. Between N:P 5 at low level and N:P 45 at high level, and between N:P 45 at low level and N:P 5 at high level, there was a nine-fold difference in N and P supply. Maximum light-saturated net photosynthesis rate (Amax), specific leaf area (SLA), leaf area, and shoot and root biomass were determined during and after the growth process. Amax was minimal at N:P 5 and increased only with increasing absolute N supply. Neither SLA nor leaf area were affected by N:P; increasing absolute P supply significantly increased leaf area. Shoot and root biomass were minimal at N:P 45 and increased dramatically with increasing absolute P supply. Plant biomass was not correlated with Amax. Our results highlight that H. lanatus growth is predominantly controlled by P supply and to a lesser extent by N, whereas net photosynthesis exerted no apparent control on growth under these sink-limited growth conditions. Our findings contribute to understanding of plant growth under sink-limited conditions.
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Affiliation(s)
- Shuqiong Wang
- Environmental Sciences, Copernicus Institute of Sustainable Development, Utrecht University, Princetonlaan 8a, PO Box 80115, 3508 TC Utrecht, the Netherlands; and Corresponding author.
| | - Jerry van Dijk
- Environmental Sciences, Copernicus Institute of Sustainable Development, Utrecht University, Princetonlaan 8a, PO Box 80115, 3508 TC Utrecht, the Netherlands
| | - Hugo J de Boer
- Environmental Sciences, Copernicus Institute of Sustainable Development, Utrecht University, Princetonlaan 8a, PO Box 80115, 3508 TC Utrecht, the Netherlands
| | - Martin J Wassen
- Environmental Sciences, Copernicus Institute of Sustainable Development, Utrecht University, Princetonlaan 8a, PO Box 80115, 3508 TC Utrecht, the Netherlands
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28
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Kaur H, Manna M, Thakur T, Gautam V, Salvi P. Imperative role of sugar signaling and transport during drought stress responses in plants. PHYSIOLOGIA PLANTARUM 2021; 171:833-848. [PMID: 33583052 DOI: 10.1111/ppl.13364] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2020] [Revised: 01/31/2021] [Accepted: 02/06/2021] [Indexed: 05/27/2023]
Abstract
Cellular sugar status is essentially maintained during normal growth conditions but is impacted negatively during various environmental perturbations. Drought presents one such unfavorable environmental cue that hampers the photosynthetic fixation of carbon into sugars and affects their transport by lowering the cellular osmotic potential. The transport of cellular sugar is facilitated by a specific set of proteins known as sugar transporters. These transporter proteins are the key determinant of influx/ efflux of various sugars and their metabolite intermediates that support the plant growth and developmental process. Abiotic stress and especially drought stress-mediated injury results in reprogramming of sugar distribution across the cellular and subcellular compartments. Here, we have reviewed the imperative role of sugar accumulation, signaling, and transport under typical and atypical stressful environments. We have discussed the physiological effects of drought on sugar accumulation and transport through different transporter proteins involved in monosaccharide and disaccharide sugar transport. Further, we have illustrated sugar-mediated signaling and regulation of sugar transporter proteins along with the overall crosstalk of this signaling with the phytohormone module of abiotic stress response under osmotic stress. Overall, the present review highlights the critical role of sugar transport, distribution and signaling in plants under drought stress conditions.
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Affiliation(s)
- Harmeet Kaur
- Plant Molecular Biology, ICAR-National Institute for Plant Biotechnology, New Delhi, India
| | - Mrinalini Manna
- Plant Molecular Biology, National Institute of Plant Genome Research, New Delhi, India
| | - Tanika Thakur
- Agriculture Biotechnology Department, National Agri-Food Biotechnology Institute, Mohali, India
| | - Vibhav Gautam
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India
| | - Prafull Salvi
- Agriculture Biotechnology Department, National Agri-Food Biotechnology Institute, Mohali, India
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Mori K, Lemaire-Chamley M, Jorly J, Carrari F, Conte M, Asamizu E, Mizoguchi T, Ezura H, Rothan C. The conserved brassinosteroid-related transcription factor BIM1a negatively regulates fruit growth in tomato. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:1181-1197. [PMID: 33097930 DOI: 10.1093/jxb/eraa495] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Accepted: 10/20/2020] [Indexed: 06/11/2023]
Abstract
Brassinosteroids (BRs) are steroid hormones that play key roles in plant development and defense. Our goal is to harness the extensive knowledge of the Arabidopsis BR signaling network to improve productivity in crop species. This first requires identifying components of the conserved network and their function in the target species. Here, we investigated the function of SlBIM1a, the closest tomato homolog of AtBIM1, which is highly expressed in fruit. SlBIM1a-overexpressing lines displayed severe plant and fruit dwarfism, and histological characterization of different transgenic lines revealed that SlBIM1a expression negatively correlated with fruit pericarp cell size, resulting in fruit size modifications. These growth phenotypes were in contrast to those found in Arabidopsis, and this was confirmed by the reciprocal ectopic expression of SlBIM1a/b in Arabidopsis and of AtBIM1 in tomato. These results determined that BIM1 function depends more on the recipient species than on its primary sequence. Yeast two-hybrid interaction studies and transcriptomic analyses of SlBIM1a-overexpressing fruit further suggested that SlBIM1a acts through its interaction with SlBZH1 to govern the transcriptional regulation of growth-related BR target genes. Together, these results suggest that SlBIM1a is a negative regulator of pericarp cell expansion, possibly at the crossroads with auxin and light signaling.
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Affiliation(s)
- Kentaro Mori
- INRAE, Univ. Bordeaux, UMR BFP, 33882, Villenave d'Ornon, France
| | | | - Joana Jorly
- INRAE, Univ. Bordeaux, UMR BFP, 33882, Villenave d'Ornon, France
| | - Fernando Carrari
- Instituto de Biotecnología, Instituto Nacional de Tecnología Agropecuaria, Consejo Nacional de Investigaciones Científicas y Técnicas, B1712WAA Castelar, Argentina
| | - Mariana Conte
- Instituto de Biotecnología, Instituto Nacional de Tecnología Agropecuaria, Consejo Nacional de Investigaciones Científicas y Técnicas, B1712WAA Castelar, Argentina
| | - Erika Asamizu
- Department of Plant Life Science, Faculty of Agriculture, Ryukoku University, Otsu, Shiga, Japan
| | - Tsuyoshi Mizoguchi
- Department of Natural Sciences, International Christian University, Mitaka, Tokyo, Japan
| | - Hiroshi Ezura
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tskuba, Ibaraki, Japan
- Tsukuba Plant Innovation Research Center, University of Tsukuba, Tskuba, Ibaraki, Japan
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30
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Gottschalk C, Zhang S, Schwallier P, Rogers S, Bukovac MJ, van Nocker S. Genetic mechanisms associated with floral initiation and the repressive effect of fruit on flowering in apple (Malus x domestica Borkh). PLoS One 2021; 16:e0245487. [PMID: 33606701 PMCID: PMC7894833 DOI: 10.1371/journal.pone.0245487] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Accepted: 01/02/2021] [Indexed: 11/19/2022] Open
Abstract
Many apple cultivars are subject to biennial fluctuations in flowering and fruiting. It is believed that this phenomenon is caused by a repressive effect of developing fruit on the initiation of flowers in the apex of proximal bourse shoots. However, the genetic pathways of floral initiation are incompletely described in apple, and the biological nature of floral repression by fruit is currently unknown. In this study, we characterized the transcriptional landscape of bourse shoot apices in the biennial cultivar, 'Honeycrisp', during the period of floral initiation, in trees bearing a high fruit load and in trees without fruit. Trees with high fruit load produced almost exclusively vegetative growth in the subsequent year, whereas the trees without fruit produced flowers on the majority of the potential flowering nodes. Using RNA-based sequence data, we documented gene expression at high resolution, identifying >11,000 transcripts that had not been previously annotated, and characterized expression profiles associated with vegetative growth and flowering. We also conducted a census of genes related to known flowering genes, organized the phylogenetic and syntenic relationships of these genes, and compared expression among homeologs. Several genes closely related to AP1, FT, FUL, LFY, and SPLs were more strongly expressed in apices from non-bearing, floral-determined trees, consistent with their presumed floral-promotive roles. In contrast, a homolog of TFL1 exhibited strong and persistent up-regulation only in apices from bearing, vegetative-determined trees, suggesting a role in floral repression. Additionally, we identified four GIBBERELLIC ACID (GA) 2 OXIDASE genes that were expressed to relatively high levels in apices from bearing trees. These results define the flowering-related transcriptional landscape in apple, and strongly support previous studies implicating both gibberellins and TFL1 as key components in repression of flowering by fruit.
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Affiliation(s)
- Chris Gottschalk
- Department of Horticulture, Plant and Soil Science Building, Michigan State University, East Lansing, Michigan, United States of America
| | - Songwen Zhang
- Department of Horticulture, Plant and Soil Science Building, Michigan State University, East Lansing, Michigan, United States of America
| | - Phil Schwallier
- Michigan State University Extension, East Lansing, Michigan, United States of America
| | - Sean Rogers
- Department of Horticulture, Plant and Soil Science Building, Michigan State University, East Lansing, Michigan, United States of America
| | - Martin J. Bukovac
- Department of Horticulture, Plant and Soil Science Building, Michigan State University, East Lansing, Michigan, United States of America
| | - Steve van Nocker
- Department of Horticulture, Plant and Soil Science Building, Michigan State University, East Lansing, Michigan, United States of America
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31
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Windt CW, Nabel M, Kochs J, Jahnke S, Schurr U. A Mobile NMR Sensor and Relaxometric Method to Non-destructively Monitor Water and Dry Matter Content in Plants. FRONTIERS IN PLANT SCIENCE 2021; 12:617768. [PMID: 33613603 PMCID: PMC7892787 DOI: 10.3389/fpls.2021.617768] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 01/05/2021] [Indexed: 05/23/2023]
Abstract
Water content (WC) and dry matter content (DMC) are some of the most basic parameters to describe plant growth and yield, but are exceptionally difficult to measure non-invasively. Nuclear Magnetic Resonance (NMR) relaxometry may fill this methodological gap. It allows non-invasive detection of protons in liquids and solids, and on the basis of these measures, can be used to quantify liquid and dry matter contents of seeds and plants. Unfortunately, most existing NMR relaxometers are large, unwieldy and not suitable to measure intact plants or to be used under field conditions. In addition, currently the appropriate NMR relaxometric methods are poorly suited for non-expert use. We here present a novel approach to overcome these drawbacks. We demonstrate that a basic NMR relaxometer with the capability to accept intact plants, in combination with straightforward NMR and data processing methods, can be used as an NMR plant sensor to continuously, quantitatively and non-invasively monitor changes in WC and DMC. This can be done in vivo, in situ, and with high temporal resolution. The method is validated by showing that measured liquid and solid proton densities accurately reflect WC and DMC of reference samples. The NMR plant sensor is demonstrated in an experimental context by monitoring WC of rice leaves under osmotic stress, and by measuring the dynamics of water and dry matter accumulation during seed filling in a developing wheat ear. It is further demonstrated how the method can be used to estimate leaf water potential on the basis of changes in leaf water content.
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Affiliation(s)
- Carel W. Windt
- Institute for Bio- and Geosciences IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | - Moritz Nabel
- Institute for Bio- and Geosciences IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | - Johannes Kochs
- Institute for Bio- and Geosciences IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | - Siegfried Jahnke
- Institute for Bio- and Geosciences IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
- Faculty of Biology Biodiversity, University of Duisburg-Essen, Essen, Germany
| | - Ulrich Schurr
- Institute for Bio- and Geosciences IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
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32
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van der Linde K, Göhre V. How Do Smut Fungi Use Plant Signals to Spatiotemporally Orientate on and In Planta? J Fungi (Basel) 2021; 7:107. [PMID: 33540708 PMCID: PMC7913117 DOI: 10.3390/jof7020107] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2020] [Revised: 01/19/2021] [Accepted: 01/23/2021] [Indexed: 11/16/2022] Open
Abstract
Smut fungi represent a large group of biotrophic plant pathogens that cause extensive yield loss and are also model organisms for studying plant-pathogen interactions. In recent years, they have become biotechnological tools. After initial penetration of the plant epidermis, smut fungi grow intra-and intercellularly without disrupting the plant-plasma membrane. Following the colonialization step, teliospores are formed and later released. While some smuts only invade the tissues around the initial penetration site, others colonize in multiple plant organs resulting in spore formation distal from the original infection site. The intimate contact zone between fungal hyphae and the host is termed the biotrophic interaction zone and enables exchange of signals and nutrient uptake. Obviously, all steps of on and in planta growth require fine sensing of host conditions as well as reprogramming of the host by the smut fungus. In this review, we highlight selected examples of smut fungal colonization styles, directional growth in planta, induction of spore formation, and the signals required, pointing to excellent reviews for details, to draw attention to some of the open questions in this important research field.
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Affiliation(s)
- Karina van der Linde
- Department of Cell Biology and Plant Biochemistry, University of Regensburg, 93053 Regensburg, Germany
| | - Vera Göhre
- Institute for Microbiology, Cluster of Excellence on Plant Sciences, Heinrich-Heine University, 40225 Düsseldorf, Germany
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33
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Eckes-Shephard AH, Tiavlovsky E, Chen Y, Fonti P, Friend AD. Direct response of tree growth to soil water and its implications for terrestrial carbon cycle modelling. GLOBAL CHANGE BIOLOGY 2021; 27:121-135. [PMID: 33065763 DOI: 10.1111/gcb.15397] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Revised: 09/25/2020] [Accepted: 09/28/2020] [Indexed: 06/11/2023]
Abstract
Wood growth constitutes the main process for long-term atmospheric carbon sequestration in vegetation. However, our understanding of the process of wood growth and its response to environmental drivers is limited. Current dynamic global vegetation models (DGVMs) are mainly photosynthesis-driven and thus do not explicitly include a direct environmental effect on tree growth. However, physiological evidence suggests that, to realistically model vegetation carbon allocation under increased climatic stressors, it is crucial to treat growth responses independently from photosynthesis. A plausible growth response function suitable for global simulations in DGVMs has been lacking. Here, we present the first soil water-growth response function and parameter range for deciduous and evergreen conifers. The response curve was calibrated against European larch and Norway spruce in a dry temperate forest in the Swiss Alps. We present a new data-driven approach based on a combination of tree ring width (TRW) records, growing season length and simulated subdaily soil hydrology to parameterize ring width increment simulations. We found that a simple linear response function, with an intercept at zero moisture stress, used in growth simulations reproduced 62.3% and 59.4% of observed TRW variability for larch and spruce respectively and, importantly, the response function slope was much steeper than literature values for soil moisture effects on photosynthesis and stomatal conductance. Specifically, we found stem growth stops at soil moisture potentials of -0.47 MPa for larch and -0.66 MPa for spruce, whereas photosynthesis in trees continues down to -1.2 MPa or lower, depending on species and measurement method. These results are strong evidence that the response functions of source and sink processes are indeed very different in trees, and need to be considered separately to correctly assess vegetation responses to environmental change. The results provide a parameterization for the explicit representation of growth responses to soil water in vegetation models.
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Affiliation(s)
| | | | - Yizhao Chen
- Department of Geography, University of Cambridge, Cambridge, UK
| | - Patrick Fonti
- Swiss Federal Institute for Forest, Snow and Landscape Research, Birmensdorf, Switzerland
| | - Andrew D Friend
- Department of Geography, University of Cambridge, Cambridge, UK
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34
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Jabran K, Doğan MN. Elevated CO 2 , temperature and nitrogen levels impact growth and development of invasive weeds in the Mediterranean region. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2020; 100:4893-4900. [PMID: 32478435 DOI: 10.1002/jsfa.10550] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2019] [Revised: 05/21/2020] [Accepted: 06/01/2020] [Indexed: 05/21/2023]
Abstract
BACKGROUND Invasive plant species present a serious threat to the environment, as well as human and animal health. An interaction may exist between the climatic changes and invasive plant species. In this 2-year study, we investigated the effects of warming, CO2 and nitrogen application on the biomass, growth and leaf tissue nitrogen concentration of three invasive weed species. Treatments were: (i) simulated (elevated) CO2 (approximately 800-900 ppm); (ii) warming or high temperature (day/night 25/15 °C); (iii) simulated (elevated) CO2 combined with high temperature (CO2 = approximately 800-900 ppm; temperature day/night 25/15 °C); and (iv) control conditions (CO2 = approximately 400-450 ppm; temperature day/night 20/10 °C). The doses of nitrogen were: (i) 0 kg ha-1 (control; low); (ii) 60 kg ha-1 (medium); and (iii) 120 kg ha-1 (high). RESULTS Elevated CO2 and elevated CO2 combined with high temperature improved biomass and the growth of the tested invasive weed species: Lactuca serriola L., Hordeum murinum L. and Bromus tectorum L. Nitrogen application had little effect on grasses, whereas the broadleaved weed mostly had a positive response to nitrogen application. Invasive weed species were generally negatively or neutrally affected by warming. CONCLUSION The results of the present study demonstrate that nitrogen fertilization under different climatic conditions improved few of the parameters, whereas elevated CO2 promoted most of the growth parameters of invasive weeds. Overall, is it concluded that these weeds will be more invasive under climate change conditions. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Khawar Jabran
- Department of Plant Protection, Adnan Menderes University, Aydin, Turkey
- Department of Plant Production and Technologies, Faculty of Agricultural Sciences and Technologies, Niğde Ömer Halisdemir University, Niğde, Turkey
| | - Mehmet N Doğan
- Department of Plant Protection, Adnan Menderes University, Aydin, Turkey
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35
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Or E, Oren O, Halaly-Basha T, Koilkonda P, Shi Z, Zheng C, Acheampong AK. Gibberellin induced shot berry formation in cv. Early Sweet is a direct consequence of high fruit set. HORTICULTURE RESEARCH 2020; 7:169. [PMID: 33082975 PMCID: PMC7528092 DOI: 10.1038/s41438-020-00388-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Revised: 07/06/2020] [Accepted: 08/01/2020] [Indexed: 05/07/2023]
Abstract
The 'seedless' table grape industry relies mainly on stenospermocarpic cultivars, in which endosperm abortion results in berries with seed rudiments and low levels of bioactive gibberellin (GA). Application of GA to enhance berry sizing in these cultivars is often accompanied by adverse effects, one of which is increased proportions of very small berries (termed shot berries). Manual removal of these berries, which is essential to improve uniformity and market value, increases production cost and exposes the cluster to damage. Unraveling the physiological causes of shot berry formation is thus of both scientific and practical value. This study focuses on understanding the GA-mediated regulation of shot berry formation in Vitis vinifera cv. Early Sweet, known for a high proportion of shot berries, which severely damage cluster appearance. As GA is known to induce the parthenocarpic fruit set, we first tested the assumption that the parthenocarpic nature of a fruitlet is a primary cause for shot berry development. We then examined the consequence of the flower load on the proportion of shot berries in the cluster. Our data suggests that: (1) contrary to prior assumptions, the parthenocarpic nature of a fruitlet is not the primary cause for shot berry development, demonstrated by the fact that parthenocarpic fruitlets develop into a full-size berries; (2) the proportion of shot berries on a cluster is a function of the initial flower load on the inflorescence, with high initial flower load resulting in greater shot berry percentage in the cluster; (3) GA treatment bypasses the natural regulation of flower load, resulting in high fruitlet density and increased competition among fruitlets; (4) variation of flower load within the cluster influences berry size uniformity to a greater extent than does the variation in number of cluster per vine. The identity of the factors that determine the fate of a given flower on a high-load cluster remains an open question.
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Affiliation(s)
- Etti Or
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
| | - Orly Oren
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
| | - Tamar Halaly-Basha
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
| | - Padmalatha Koilkonda
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
- Division of Crop Sciences, ICAR-Central Research Institute for Dryland Agriculture, Santoshnagar, Hyderabad, Telangana 500059 India
| | - Zhaowan Shi
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
| | - Chuanlin Zheng
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
- Department of Fruit Tree Sciences, College of Horticulture, China Agricultural University, Beijing, 100193 China
| | - Atiako Kwame Acheampong
- Institute of Plant Sciences, Department of Fruit Tree Sciences, Agricultural Research Organization, Volcani Center, Rishon LeZion, 7528809 Israel
- Biology department, University of North Carolina, Chapel Hill, NC 27514 USA
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36
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Hageman AN, Urban MO, Van Volkenburgh E. Sensitivity of leaflet growth rate to drought predicts yield in common bean (Phaseolus vulgaris). FUNCTIONAL PLANT BIOLOGY : FPB 2020; 47:792-802. [PMID: 32553089 DOI: 10.1071/fp19332] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Accepted: 03/29/2020] [Indexed: 06/11/2023]
Abstract
Although drought limits yield by decreasing photosynthesis and therefore biomass accumulation, biomass is not the strongest predictor of yield under drought in common beans (Phaseolus vulgaris L.). Instead, resource partitioning from pod walls into seeds is a stronger correlate. Our aim was to determine whether growth rates of developing leaflets and pods, as independent indicators of sink strength, predict resource partitioning into seeds. Using 20 field-grown genotypes, we paired biomass, yield, and resource partitioning data with leaflet and pod growth rates under well-watered and droughted conditions. We hypothesised that genotypes with faster growing leaflets and pods under drought would fill seeds better. However, we found that leaflet and pod growth rates did not predict partitioning to seeds; rather, sensitivity of leaflet growth rate to drought was a good predictor of yield reduction. Further, plants with rapidly growing leaves under well-watered conditions were most vulnerable to decreases in leaflet growth rate under drought. This suggests that lines that inherited a conservative growth strategy were better able to maintain yield by allocating resources to seeds. Our findings indicate that inherent sensitivity of leaflet growth rate to drought may be used as a predictor of partitioning and yield in common beans.
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Affiliation(s)
- Amber N Hageman
- University of Washington, Life Sciences Building, W Stevens Way NE, Seattle, WA 98195, USA
| | - Milan O Urban
- Bioversity International and the International Center for Tropical Agriculture (CIAT), Km 17 Recta Cali-Palmira CP 763537, Apartado Aereo 6713, Cali, Colombia
| | - Elizabeth Van Volkenburgh
- University of Washington, Life Sciences Building, W Stevens Way NE, Seattle, WA 98195, USA; and Corresponding author.
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Chairi F, Sanchez-Bragado R, Serret MD, Aparicio N, Nieto-Taladriz MT, Luis Araus J. Agronomic and physiological traits related to the genetic advance of semi-dwarf durum wheat: The case of Spain. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2020; 295:110210. [PMID: 32534614 DOI: 10.1016/j.plantsci.2019.110210] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Revised: 07/18/2019] [Accepted: 07/31/2019] [Indexed: 05/16/2023]
Abstract
Knowledge of the agronomic and physiological traits associated with genetic gains in yield is essential to improve understanding of yield-limiting factors and to inform future breeding strategies. The aim of this paper is to dissect the agronomic and physiological traits related to genetic gain and to propose an ideotype with high yield that is best adapted to Spanish Mediterranean environments. Six semi-dwarf (i.e. modern) durum wheat genotypes were grown in a wide range of growing conditions in Spain during two successive years. Diverse agronomic, physiological and leaf morphological traits were evaluated. Kernels spike-1 was the yield component most affected by the genetic gain. While no interaction between genotype and growing conditions existed for grain yield, the more productive genotypes were characterized by a plant height of around 85 cm, small erect flag leaves, more open stomata, a better balance between N sources and N sinks and a higher capacity to re-fix CO2 respired by the grain. Moreover, in general the non-laminar parts of the plants play a key role in providing assimilates during grain filling. The high heritability of most of the studied parameters allows their consideration as traits for phenotyping durum wheat better adapted to a wide range of Mediterranean conditions.
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Affiliation(s)
- Fadia Chairi
- Section of Plant Physiology, University of Barcelona, Barcelona, Spain; AGROTECNIO (Center of Research in Agrotechnology), Lleida, Spain
| | - Rut Sanchez-Bragado
- AGROTECNIO (Center of Research in Agrotechnology), Lleida, Spain; Department of Crop and Forest Sciences, University of Lleida, Lleida, Spain
| | - Maria Dolores Serret
- Section of Plant Physiology, University of Barcelona, Barcelona, Spain; AGROTECNIO (Center of Research in Agrotechnology), Lleida, Spain
| | - Nieves Aparicio
- Instituto de Tecnología Agraria de Castilla y León (ITACyL), Valladolid, Spain
| | | | - José Luis Araus
- Section of Plant Physiology, University of Barcelona, Barcelona, Spain; AGROTECNIO (Center of Research in Agrotechnology), Lleida, Spain.
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Ren R, Yue X, Li J, Xie S, Guo S, Zhang Z. Coexpression of Sucrose Synthase and the SWEET Transporter, Which Are Associated With Sugar Hydrolysis and Transport, Respectively, Increases the Hexose Content in Vitis vinifera L. Grape Berries. FRONTIERS IN PLANT SCIENCE 2020; 11:321. [PMID: 32457764 PMCID: PMC7221319 DOI: 10.3389/fpls.2020.00321] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2019] [Accepted: 03/04/2020] [Indexed: 05/05/2023]
Abstract
The sugar content of grape berries is affected by many factors. To explore the hexose content in different cultivars, the photosynthesis, vegetative, and reproductive biomass, as well as the enzyme activities and expression levels of genes related to sugar metabolism and sugar contents were measured. Samples were collected 70-110 days after anthesis (DAA), from Riesling (RI), Petit Manseng (PM), and Cabernet Sauvignon (CS) berries cultivated in the field. The results indicated that high expression levels of VvSWEET15 and VvSS3 and a high activity of sucrose synthase (SS) are associated with a higher hexose content in the berries of PM than in the berries of the other two cultivars. These genes promoted hexose accumulation in the berries by regulating sugar hydrolysis and transport. The results of this study indicate that active sugar hydrolysis and transport increase the hexose content of PM berries, which provides insights for grape berry quality improvement and breeding projects in wine production. Main Conclusion: The active VvSS3, sucrose synthase (SS), and VvSWEET15 increases the hexose content in Petit Manseng berries, which are associated with sugar hydrolysis and transport.
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Affiliation(s)
- Ruihua Ren
- College of Enology, Northwest A&F University, Yangling, China
| | - Xiaofeng Yue
- College of Enology, Northwest A&F University, Yangling, China
| | - Junnan Li
- College of Enology, Northwest A&F University, Yangling, China
| | - Sha Xie
- College of Enology, Northwest A&F University, Yangling, China
| | - Shuihuan Guo
- College of Enology, Northwest A&F University, Yangling, China
| | - Zhenwen Zhang
- College of Enology, Northwest A&F University, Yangling, China
- Shaanxi Engineering Research Center for Viti-Viniculture, Northwest A&F University, Yangling, China
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Mund M, Herbst M, Knohl A, Matthäus B, Schumacher J, Schall P, Siebicke L, Tamrakar R, Ammer C. It is not just a 'trade-off': indications for sink- and source-limitation to vegetative and regenerative growth in an old-growth beech forest. THE NEW PHYTOLOGIST 2020; 226:111-125. [PMID: 31901219 DOI: 10.1111/nph.16408] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2018] [Accepted: 11/10/2019] [Indexed: 06/10/2023]
Abstract
Controls on tree growth are key issues in plant physiology. The hypothesis of our study was that the interannual variability of wood and fruit production are primarily controlled directly by weather conditions (sink limitation), while carbon assimilation (source limitation) plays a secondary role. We analyzed the interannual variability of weather conditions, gross primary productivity (GPP) and net primary productivity (NPP) of wood and fruits of an old-growth, unmanaged Fagus sylvatica forest over 14 yr, including six mast years. In a multiple linear regression model, c. 71% of the annual variation in wood-NPP could be explained by mean air temperature in May, precipitation from April to May (positive influence) and fruit-NPP (negative influence). GPP of June to July solely explained c. 42% of the variation in wood-NPP. Fruit-NPP was positively related to summer precipitation 2 yr before (R2 = 0.85), and negatively to precipitation in May (R2 = 0.83) in the fruit years. GPP had no influence on fruit-NPP. Our results suggest a complex system of sink and source limitations to tree growth driven by weather conditions and going beyond a simple carbon-mediated 'trade-off' between regenerative and vegetative growth.
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Affiliation(s)
- Martina Mund
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Büsgenweg 1, D-37077, Göttingen, Germany
| | - Mathias Herbst
- German Meteorological Service, Centre for Agrometeorological Research, Bundesallee 33, D-38116, Braunschweig, Germany
| | - Alexander Knohl
- Bioclimatology, University of Göttingen, Büsgenweg 2, D-37077, Göttingen, Germany
- Centre of Biodiversity and Sustainable Land Use (CBL), University of Göttingen, Büsgenweg 1, D-37073, Göttingen, Germany
| | - Bertrand Matthäus
- Max Rubner-Institute, Federal Research Institute of Nutrition and Food, Schützenberg 12, D-32756, Detmold, Germany
| | - Jens Schumacher
- Institute of Mathematics, University of Jena, Ernst-Abbe-Platz 2, D-07743, Jena, Germany
| | - Peter Schall
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Büsgenweg 1, D-37077, Göttingen, Germany
| | - Lukas Siebicke
- Bioclimatology, University of Göttingen, Büsgenweg 2, D-37077, Göttingen, Germany
| | - Rijan Tamrakar
- Bioclimatology, University of Göttingen, Büsgenweg 2, D-37077, Göttingen, Germany
- School of Natural Sciences, Bangor University, Bangor, LL57 2UW, UK
| | - Christian Ammer
- Silviculture and Forest Ecology of the Temperate Zones, University of Göttingen, Büsgenweg 1, D-37077, Göttingen, Germany
- Centre of Biodiversity and Sustainable Land Use (CBL), University of Göttingen, Büsgenweg 1, D-37073, Göttingen, Germany
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Tao Y, Zhao X, Wang X, Hathorn A, Hunt C, Cruickshank AW, van Oosterom EJ, Godwin ID, Mace ES, Jordan DR. Large-scale GWAS in sorghum reveals common genetic control of grain size among cereals. PLANT BIOTECHNOLOGY JOURNAL 2020; 18:1093-1105. [PMID: 31659829 PMCID: PMC7061873 DOI: 10.1111/pbi.13284] [Citation(s) in RCA: 46] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Revised: 09/30/2019] [Accepted: 10/24/2019] [Indexed: 05/20/2023]
Abstract
Grain size is a key yield component of cereal crops and a major quality attribute. It is determined by a genotype's genetic potential and its capacity to fill the grains. This study aims to dissect the genetic architecture of grain size in sorghum. An integrated genome-wide association study (GWAS) was conducted using a diversity panel (n = 837) and a BC-NAM population (n = 1421). To isolate genetic effects associated with genetic potential of grain size, rather than the genotype's capacity to fill the grains, a treatment of removing half of the panicle was imposed during flowering. Extensive and highly heritable variation in grain size was observed in both populations in 5 field trials, and 81 grain size QTL were identified in subsequent GWAS. These QTL were enriched for orthologues of known grain size genes in rice and maize, and had significant overlap with SNPs associated with grain size in rice and maize, supporting common genetic control of this trait among cereals. Grain size genes with opposite effect on grain number were less likely to overlap with the grain size QTL from this study, indicating the treatment facilitated identification of genetic regions related to the genetic potential of grain size. These results enhance understanding of the genetic architecture of grain size in cereal, and pave the way for exploration of underlying molecular mechanisms and manipulation of this trait in breeding practices.
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Affiliation(s)
- Yongfu Tao
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
| | - Xianrong Zhao
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
| | - Xuemin Wang
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
| | - Adrian Hathorn
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
| | - Colleen Hunt
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
- Agri‐Science QueenslandDepartment of Agriculture and Fisheries (DAF)Hermitage Research FacilityWarwickQldAustralia
| | - Alan W. Cruickshank
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
- Agri‐Science QueenslandDepartment of Agriculture and Fisheries (DAF)Hermitage Research FacilityWarwickQldAustralia
| | - Erik J. van Oosterom
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandBrisbaneQldAustralia
| | - Ian D. Godwin
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandBrisbaneQldAustralia
| | - Emma S. Mace
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
- Agri‐Science QueenslandDepartment of Agriculture and Fisheries (DAF)Hermitage Research FacilityWarwickQldAustralia
| | - David R. Jordan
- Queensland Alliance for Agriculture and Food Innovation (QAAFI)The University of QueenslandHermitage Research FacilityWarwickQldAustralia
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Abstract
Modeling is a fundamental part of quantitative science used to bring together several quantitative components, often developed though detailed reductionist approach on component parts, e.g., sucrose transport through a membrane osmotic relation. It is now generally accepted that phloem transport is the result of bulk solution flow generated by the difference in osmotic pressure between source and sink tissues. However, there is still little agreement on how different sink tissues compete for available carbohydrate. Furthermore, the impact of phloem pathway leakage (unloading) and reloading on source-to-sink carbon transport remains unclear. Moreover, it is debated to what degree the interactions between phloem and xylem flows influence carbohydrate source-sink relations. These aspects are extremely difficult to research by a reductionist approach, with modeling being an important tool to examine the consequences of proposed mechanisms, which can then be tested on whole plants.Phloem/xylem modeling has been at the limits of quantitative modeling, especially when dynamic models are needed to explain tracer studies. Advances in computing now enable more realistic modeling, which are utilized by the PiafMunch approach described here. This model enables a high level of mechanistic detail to be incorporated and the observable effect of it to be tested. In the most recent version of the software with the introduction of tracer dynamics, it can now predict the effects of specific phloem mechanisms upon the shape of evolving tracer profiles.
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Gugliuzza G, Talluto G, Martinelli F, Farina V, Lo Bianco R. Water Deficit Affects the Growth and Leaf Metabolite Composition of Young Loquat Plants. PLANTS (BASEL, SWITZERLAND) 2020; 9:E274. [PMID: 32093009 PMCID: PMC7076381 DOI: 10.3390/plants9020274] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Revised: 02/08/2020] [Accepted: 02/17/2020] [Indexed: 01/10/2023]
Abstract
Water scarcity in the Mediterranean area is very common and understanding responses to drought is important for loquat management and production. The objective of this study was to evaluate the effect of drought on the growth and metabolism of loquat. Ninety two-year-old plants of 'Marchetto' loquat grafted on quince were grown in the greenhouse in 12-liter pots and three irrigation regimes were imposed starting on 11 May and lasting until 27 July, 2013. One-third of the plants was irrigated with 100% of the water consumed (well watered, WW), a second group of plants was irrigated with 66% of the water supplied to the WW plants (mild drought, MD), and a third group was irrigated with 33% of the water supplied to the WW plants (severe drought, SD). Minimum water potential levels of -2.0 MPa were recorded in SD plants at the end of May. Photosynthetic rates were reduced according to water supply (WW>MD>SD), especially during the morning hours. By the end of the trial, severe drought reduced all growth parameters and particularly leaf growth. Drought induced early accumulation of sorbitol in leaves, whereas other carbohydrates were not affected. Of over 100 leaf metabolites investigated, 9 (squalene, pelargonic acid, glucose-1-phosphate, palatinol, capric acid, aconitic acid, xylitol, lauric acid, and alanine) were found to be useful to discriminate between the three irrigation groups, suggesting their involvement in loquat metabolism under drought conditions. Loquat behaved as a moderately drought-tolerant species (limited stem water potential and growth reductions) and the accumulation of sorbitol in favor of sucrose in mildly-stressed plants may be considered an early protective mechanism against leaf dehydration and a potential biochemical marker for precise irrigation management.
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Affiliation(s)
- Giovanni Gugliuzza
- CREA—Research Centre for Plant Protection and Certification, SS 113 Km 245.500, 90011 Bagheria, Italy; (G.G.); (G.T.)
| | - Giuseppe Talluto
- CREA—Research Centre for Plant Protection and Certification, SS 113 Km 245.500, 90011 Bagheria, Italy; (G.G.); (G.T.)
| | - Federico Martinelli
- Department of Biology, University of Florence, via Madonna del Piano 6, 50019 Sesto Fiorentino, Italy;
| | - Vittorio Farina
- Department of Agricultural, Food and Forest Sciences, University of Palermo, Viale delle Scienze, Ed. 4, 90128 Palermo, Italy;
| | - Riccardo Lo Bianco
- Department of Agricultural, Food and Forest Sciences, University of Palermo, Viale delle Scienze, Ed. 4, 90128 Palermo, Italy;
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Paponov M, Kechasov D, Lacek J, Verheul MJ, Paponov IA. Supplemental Light-Emitting Diode Inter-Lighting Increases Tomato Fruit Growth Through Enhanced Photosynthetic Light Use Efficiency and Modulated Root Activity. FRONTIERS IN PLANT SCIENCE 2020; 10:1656. [PMID: 31998343 PMCID: PMC6965351 DOI: 10.3389/fpls.2019.01656] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2019] [Accepted: 11/25/2019] [Indexed: 05/25/2023]
Abstract
We investigated the effect of supplemental LED inter-lighting (80% red, 20% blue; 70 W m-2; light period 04:00-22:00) on the productivity and physiological traits of tomato plants (Flavance F1) grown in an industrial greenhouse with high pressure sodium (HPS) lamps (235 W m-2, 420 µmol m-2 s-1 at canopy). Physiological trait measurements included diurnal photosynthesis and fruit relative growth rates, fruit weight at specific positions in the truss, root pressure, xylem sap hormone and ion compositions, and fruit quality. In the control treatment with HPS lamps alone, the ratio of far-red to red light (FR:R) was 1.2 at the top of the canopy and increased to 5.4 at the bottom. The supplemental LED inter-lighting decreased the FR:R ratio at the middle and low positions in the canopy and was associated with greener leaves and higher photosynthetic light use efficiency (PLUE) in the leaves in the lower canopy. The use of LED inter-lighting increased the biomass and yield by increasing the fruit weight and enhancing plant growth. The PLUE of plants receiving supplemental LED light decreased at the end of the light period, indicating that photosynthesis of the supplemented plants at the end of the day might be limited by sink capacity. The supplemental LED lighting increased the size of fruits in the middle and distal positions of the truss, resulting in a more even size for each fruit in the truss. Diurnal analysis of fruit growth showed that fruits grew more quickly during the night on the plants receiving LED light than on unsupplemented control plants. This faster fruit growth during the night was related to an increased root pressure. The LED treatment also increased the xylem levels of the phytohormone jasmonate. Supplemental LED inter-lighting increased tomato fruit weight without affecting the total soluble solid contents in fruits by increasing the total assimilates available for fruit growth and by enhancing root activity through an increase in root pressure and water supply to support fruit growth during the night.
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Affiliation(s)
- Martina Paponov
- Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | - Dmitry Kechasov
- Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | - Jozef Lacek
- Institute of Experimental Botany, Czech Academy of Sciences, Prague, Czechia
| | - Michel J. Verheul
- Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
| | - Ivan A. Paponov
- Division of Food Production and Society, Norwegian Institute of Bioeconomy Research (NIBIO), Ås, Norway
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Merganičová K, Merganič J, Lehtonen A, Vacchiano G, Sever MZO, Augustynczik ALD, Grote R, Kyselová I, Mäkelä A, Yousefpour R, Krejza J, Collalti A, Reyer CPO. Forest carbon allocation modelling under climate change. TREE PHYSIOLOGY 2019; 39:1937-1960. [PMID: 31748793 PMCID: PMC6995853 DOI: 10.1093/treephys/tpz105] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Revised: 06/03/2019] [Accepted: 09/24/2019] [Indexed: 05/19/2023]
Abstract
Carbon allocation plays a key role in ecosystem dynamics and plant adaptation to changing environmental conditions. Hence, proper description of this process in vegetation models is crucial for the simulations of the impact of climate change on carbon cycling in forests. Here we review how carbon allocation modelling is currently implemented in 31 contrasting models to identify the main gaps compared with our theoretical and empirical understanding of carbon allocation. A hybrid approach based on combining several principles and/or types of carbon allocation modelling prevailed in the examined models, while physiologically more sophisticated approaches were used less often than empirical ones. The analysis revealed that, although the number of carbon allocation studies over the past 10 years has substantially increased, some background processes are still insufficiently understood and some issues in models are frequently poorly represented, oversimplified or even omitted. Hence, current challenges for carbon allocation modelling in forest ecosystems are (i) to overcome remaining limits in process understanding, particularly regarding the impact of disturbances on carbon allocation, accumulation and utilization of nonstructural carbohydrates, and carbon use by symbionts, and (ii) to implement existing knowledge of carbon allocation into defence, regeneration and improved resource uptake in order to better account for changing environmental conditions.
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Affiliation(s)
- Katarína Merganičová
- Czech University of Life Sciences, Prague, Faculty of Forestry and Wood Sciences, Kamýcká 129, 16500 Praha-Suchdol, Czech Republic
- Technical University Zvolen, Forestry Faculty, T. G. Masaryka 24, 96053 Zvolen, Slovakia
| | - Ján Merganič
- Technical University Zvolen, Forestry Faculty, T. G. Masaryka 24, 96053 Zvolen, Slovakia
| | - Aleksi Lehtonen
- The Finnish Forest Research Institute - Luke, PO Box 18 (Jokiniemenkuja 1), FI-01301 Vantaa, Finland
| | - Giorgio Vacchiano
- Università degli Studi di Milano, DISAA. Via Celoria 2, 20132 Milano, Italy
| | - Maša Zorana Ostrogović Sever
- Croatian Forest Research Institute, Department for forest management and forestry economics, Cvjetno naselje 41, 10450 Jastrebarsko, Croatia
| | | | - Rüdiger Grote
- Institute of Meteorology and Climate Research (IMK-IFU), Karlsruhe Institute of Technology, Garmisch-Partenkirchen, Germany
| | - Ina Kyselová
- Global Change Research Institute CAS, Bělidla 986/4a, 603 00 Brno, Czech Republic
| | - Annikki Mäkelä
- University of Helsinki, Department of Forest Science, Latokartanonkaari 7, P.O. Box 27, 00014 Helsinki, Finland
| | - Rasoul Yousefpour
- University of Freiburg, Tennenbacher Str. 4 (2. OG), D-79106 Freiburg, Germany
| | - Jan Krejza
- Global Change Research Institute CAS, Bělidla 986/4a, 603 00 Brno, Czech Republic
| | - Alessio Collalti
- National Research Council of Italy, Institute for Agriculture and Forestry Systems in the Mediterranean (CNR-ISAFOM), 87036 Rende, Italy
- Department of Innovation in Biological, Agro-food and Forest Systems, University of Tuscia, 01100 Viterbo, Italy
| | - Christopher P O Reyer
- Potsdam Institute for Climate Impact Research, Telegraphenberg, PO Box 601203, D-14473 Potsdam, Germany
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Li Y, Tu M, Feng Y, Wang W, Messing J. Common metabolic networks contribute to carbon sink strength of sorghum internodes: implications for bioenergy improvement. BIOTECHNOLOGY FOR BIOFUELS 2019; 12:274. [PMID: 31832097 PMCID: PMC6868837 DOI: 10.1186/s13068-019-1612-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2019] [Accepted: 11/09/2019] [Indexed: 05/24/2023]
Abstract
BACKGROUND Sorghum bicolor (L.) is an important bioenergy source. The stems of sweet sorghum function as carbon sinks and accumulate large amounts of sugars and lignocellulosic biomass and considerable amounts of starch, therefore providing a model of carbon allocation and accumulation for other bioenergy crops. While omics data sets for sugar accumulation have been reported in different genotypes, the common features of primary metabolism in sweet genotypes remain unclear. To obtain a cohesive and comparative picture of carbohydrate metabolism between sorghum genotypes, we compared the phenotypes and transcriptome dynamics of sugar-accumulating internodes among three different sweet genotypes (Della, Rio, and SIL-05) and two non-sweet genotypes (BTx406 and R9188). RESULTS Field experiments showed that Della and Rio had similar dynamics and internode patterns of sugar concentration, albeit distinct other phenotypes. Interestingly, cellulose synthases for primary cell wall and key genes in starch synthesis and degradation were coordinately upregulated in sweet genotypes. Sweet sorghums maintained active monolignol biosynthesis compared to the non-sweet genotypes. Comparative RNA-seq results support the role of candidate Tonoplast Sugar Transporter gene (TST), but not the Sugars Will Eventually be Exported Transporter genes (SWEETs) in the different sugar accumulations between sweet and non-sweet genotypes. CONCLUSIONS Comparisons of the expression dynamics of carbon metabolic genes across the RNA-seq data sets identify several candidate genes with contrasting expression patterns between sweet and non-sweet sorghum lines, including genes required for cellulose and monolignol synthesis (CesA, PTAL, and CCR), starch metabolism (AGPase, SS, SBE, and G6P-translocator SbGPT2), and sucrose metabolism and transport (TPP and TST2). The common transcriptome features of primary metabolism identified here suggest the metabolic networks contributing to carbon sink strength in sorghum internodes, prioritize the candidate genes for manipulating carbon allocation with bioenergy purposes, and provide a comparative and cohesive picture of the complexity of carbon sink strength in sorghum stem.
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Affiliation(s)
- Yin Li
- Waksman Institute of Microbiology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854 USA
| | - Min Tu
- Waksman Institute of Microbiology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854 USA
| | - Yaping Feng
- Waksman Institute of Microbiology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854 USA
| | - Wenqing Wang
- School of Agriculture and Biology, Shanghai Jiaotong University, 800 Dong Chuan Road, Shanghai, 200240 China
| | - Joachim Messing
- Waksman Institute of Microbiology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854 USA
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Yuan J, Sun N, Du H, Muhammad U, Kang H, Du B, Yin S, Liu C. Correlated metabolic and elemental variations between the leaves and seeds of oak trees at contrasting geologically derived phosphorus sites. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 691:178-186. [PMID: 31319254 DOI: 10.1016/j.scitotenv.2019.07.133] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Revised: 07/03/2019] [Accepted: 07/09/2019] [Indexed: 06/10/2023]
Abstract
The leaves and seeds of plants frequently function as the source and sink organs for distinct metabolites, which can interactively vary in response to adverse site conditions. Subtropical soils are typically characterized as having deficient phosphorus (P), calcium (Ca), and magnesium (Mg), with enriched aluminum (Al) and iron (Fe), while Al and manganese (Mn) are toxic at low pH. It remains largely unknown how leaf- and seed-sourced metabolites are synergistically linked to adapt to P-variable soils for trees in subtropical areas. Here we quantified the metabolic and elemental profiling in the mature leaves and immature seeds of Quercus variabilis at contrasting geologically-derived phosphorus sites in subtropical China. The results revealed that carbon (C) and nitrogen (N) based metabolites (primarily sugars and organic acids), as well as enzyme- and protein/nucleic acid-related elements (N, P, Mg, and Mn) played important roles toward characterizing the profiling of metabolites and ionomes in leaves and seeds at two site types, respectively. These metabolites (sugars, amino acids, and fatty acids) and elements (N, P, Mg, and Mn) of seeds were closely related to the sugars, organic acids, and elements (N, P, Mg, and Mn) of leaves at the two site types. For the most part, the content of N and P in the soil affected the accumulation of materials (such as, starchs and proteins) in seeds, as well as N and P assimilation in leaves, by influencing C- and N-containing metabolites in leaves. These results suggested that correlated disparities of C- and N-containing metabolites, along with enzyme- and protein/nucleic acid-related elements in both leaves and seeds played important roles in plants to facilitate their adaptation to nutrient-variable sites in subtropical zones.
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Affiliation(s)
- Jun Yuan
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China
| | - Ningxiao Sun
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China; Shanghai Urban Forest Research Station, State Forestry and Grassland Administration, China; Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China
| | - Hongmei Du
- School of Design, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China
| | - Umair Muhammad
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China
| | - Hongzhang Kang
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China; Shanghai Urban Forest Research Station, State Forestry and Grassland Administration, China; Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China
| | - Baoming Du
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China; Shanghai Urban Forest Research Station, State Forestry and Grassland Administration, China; Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China
| | - Shan Yin
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China; Shanghai Urban Forest Research Station, State Forestry and Grassland Administration, China; Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China
| | - Chunjiang Liu
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD., Shanghai, China; Shanghai Urban Forest Research Station, State Forestry and Grassland Administration, China; Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China.
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Yasir TA, Wasaya A, Hussain M, Ijaz M, Farooq M, Farooq O, Nawaz A, Hu YG. Evaluation of physiological markers for assessing drought tolerance and yield potential in bread wheat. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2019; 25:1163-1174. [PMID: 31564779 PMCID: PMC6745756 DOI: 10.1007/s12298-019-00694-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2019] [Revised: 06/06/2019] [Accepted: 07/16/2019] [Indexed: 05/13/2023]
Abstract
Carbon isotope discrimination (Δ) has been recognized as a valuable phenotyping tool in wheat breeding. However, technical expertise and analysis cost restrict its large-scale use. We examined the associations of ash content (AC), minerals content (Ca, K, Mg, Fe and Mn) and leaf chlorophyll content (Chl) with grain Δ and grain yield (GY) to assess their potential as substitute to grain Δ. We evaluated 49 wheat genotypes under two water deficit regimes (W120 and W200) in a rain-out shelter. Leaf chlorophyll content (Chl) was strongly correlated with grain Δ and GY under moderate water deficit regime (W200). Significant and negative correlations (P < 0.01) of AC and potassium concentration (K) with grain Δ, and between AC and GY was observed under both water regimes, while manganese concentration (Mn) was negatively correlated with grain Δ under W120 regime only and magnesium concentration (Mg) correlated negatively under the W200 regime only. Grain Δ was correlated (P < 0.01) positively with photosynthesis rate (A), stomatal conductance (gs) and GY, while correlated negatively (P < 0.01) with intrinsic water use efficiency (iWUE) under both water regimes. Results confirm the role of grain Δ as an indirect selection criterion for drought tolerance under a wide range of drought conditions. Additionally, Chl is the most suitable trait to predict yield under moderate water deficit conditions. AC and K concentration in grain proved potentially useful and economical alternative criterion to grain Δ in the evaluation of differences in yield potential and drought tolerance in wheat under drought.
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Affiliation(s)
- Tauqeer Ahmad Yasir
- College of Agriculture, Bahauddin Zakariya University, Bahadur Sub-Campus, Layyah, Punjab Pakistan
| | - Allah Wasaya
- College of Agriculture, Bahauddin Zakariya University, Bahadur Sub-Campus, Layyah, Punjab Pakistan
| | - Mubshar Hussain
- Department of Agronomy, Bahauddin Zakariya University, Multan, Pakistan
| | - Muhammad Ijaz
- College of Agriculture, Bahauddin Zakariya University, Bahadur Sub-Campus, Layyah, Punjab Pakistan
| | - Muhammad Farooq
- Department of Agronomy, University of Agriculture, Faisalabad, Pakistan
- The UWA Institute of Agriculture, The University of Western Australia, Crawley, WA 6009 Australia
- College of Food and Agricultural Sciences, King Saud University, Riyadh, 11451 Saudi Arabia
| | - Omer Farooq
- Department of Agronomy, Bahauddin Zakariya University, Multan, Pakistan
| | - Ahmad Nawaz
- College of Agriculture, Bahauddin Zakariya University, Bahadur Sub-Campus, Layyah, Punjab Pakistan
| | - Yin-Gang Hu
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling, 712100 Shaanxi China
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Ho LH, Klemens PAW, Neuhaus HE, Ko HY, Hsieh SY, Guo WJ. SlSWEET1a is involved in glucose import to young leaves in tomato plants. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:3241-3254. [PMID: 30958535 PMCID: PMC6598072 DOI: 10.1093/jxb/erz154] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Accepted: 03/20/2019] [Indexed: 05/04/2023]
Abstract
Sugar allocation from source to sink (young) leaves, critical for plant development, relies on activities of plasma membrane sugar transporters. However, the key sugar unloading mechanism to sink leaves remains elusive. SWEET transporters mediate sugar efflux into reproductive sinks; therefore, they are promising candidates for sugar unloading during leaf growth. Transcripts of SlSWEET1a, belonging to clade I of the SWEET family, were markedly more abundant than those of all other 30 SlSWEET genes in young leaves of tomatoes. High expression of SlSWEET1a was also detected in reproductive sinks, such as flowers. SlSWEET1a was dominantly expressed in leaf unloading veins, and the green fluorescent protein (GFP) fusion protein was localized to the plasma membrane using Arabidopsis protoplasts, further implicating this carrier in sugar unloading. In addition, yeast growth assays and radiotracer uptake analyses further demonstrated that SlSWEET1a acted as a low-affinity (Km ~100 mM) glucose-specific carrier with a passive diffusion manner. Finally, virus-induced gene silencing of SlSWEET1a expression reduced hexose accumulation to ~50% in young leaves, with a parallel 2-fold increase in mature leaves. Thus, we propose a novel function for SlSWEET1a in the uptake of glucose into unloading cells as part of the sugar unloading mechanism in sink leaves of tomato.
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Affiliation(s)
- Li-Hsuan Ho
- Department of Biotechnology and Bioindustry Sciences, National Cheng Kung University, Tainan City, Taiwan
| | - Patrick A W Klemens
- Plant Physiology, University of Kaiserslautern, Erwin-Schrödinger-Straße, Kaiserslautern, Germany
| | - H Ekkehard Neuhaus
- Plant Physiology, University of Kaiserslautern, Erwin-Schrödinger-Straße, Kaiserslautern, Germany
| | - Han-Yu Ko
- Department of Biotechnology and Bioindustry Sciences, National Cheng Kung University, Tainan City, Taiwan
| | - Shu-Ying Hsieh
- Department of Biotechnology and Bioindustry Sciences, National Cheng Kung University, Tainan City, Taiwan
| | - Woei-Jiun Guo
- Department of Biotechnology and Bioindustry Sciences, National Cheng Kung University, Tainan City, Taiwan
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49
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Hoidal N, Díaz Gallardo M, Jacobsen SE, Alandia G. Amaranth as a Dual-Use Crop for Leafy Greens and Seeds: Stable Responses to Leaf Harvest Across Genotypes and Environments. FRONTIERS IN PLANT SCIENCE 2019; 10:817. [PMID: 31297125 PMCID: PMC6607857 DOI: 10.3389/fpls.2019.00817] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 06/06/2019] [Indexed: 05/11/2023]
Abstract
Dual-use production systems that utilize the green leaves as well as seeds from amaranth are highly promising for small-scale farmers around the world. The leaves are an important source of nutrients for farming families, while seeds can provide income. Farmers who use amaranth as a dual-use crop are concerned about the impacts of defoliation on seed yield. This experiment tested defoliation at various intensities and frequencies (0, 25, 50, 75, and 100% defoliation, 1, 2, and 3 times) under controlled conditions as well as under Danish and Mexican field conditions. Defoliation tolerance was tested in a total of seven varieties, spanning the three primary grain amaranth species: A. cruentus, A. hypocondriacus, and A. caudatus. In all of the varieties and environments tested, we found that neither seed yield nor quality was impacted by a single defoliation event at intensities up to 50% leaf removal. We observed similar responses with two and three consecutive defoliations in which we removed 25% of all leaves. Greater frequency and intensity of defoliation resulted in reduced seed yield in some environments, while seed quality (protein content and 1000 KW) did not appear to be affected. Dual-use production systems should be promoted with small-scale farmers around the world as promising systems for improving local nutrition while maintaining profits from seed production. This paper provides baseline guidelines for farmers regarding optimal defoliation intensities and frequencies.
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Affiliation(s)
- Natalie Hoidal
- Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark
| | - Maria Díaz Gallardo
- Instituto Pensamiento y Cultura en América Latina, Universidad Comunal Intercultural de Cempoaltépetl Barrio el Calvario, Tlahuitoltepec Mixe Oaxaca, Mexico
| | | | - Gabriela Alandia
- Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark
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Clark TJ, Friel CA, Grman E, Friesen ML, Shachar-Hill Y. Unfair trade underground revealed by integrating data with Nash bargaining models. THE NEW PHYTOLOGIST 2019; 222:1325-1337. [PMID: 30671951 DOI: 10.1111/nph.15703] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2018] [Accepted: 01/08/2019] [Indexed: 06/09/2023]
Abstract
Mutually beneficial resource exchange is fundamental to global biogeochemical cycles and plant and animal nutrition. However, there is inherent potential conflict in mutualisms, as each organism benefits more when the exchange ratio ('price') minimizes its own costs and maximizes its benefits. Understanding the bargaining power that each partner has in these interactions is key to our ability to predict the exchange ratio and therefore the functionality of the cell, organism, community and ecosystem. We tested whether partners have symmetrical ('fair') or asymmetrical ('unfair') bargaining power in a legume-rhizobia nitrogen-fixing symbiosis using measurements of carbon and nitrogen dynamics in a mathematical modeling framework derived from economic theory. A model of symmetric bargaining power was not consistent with our data. Instead, our data indicate that the growth benefit to the plant (Medicago truncatula) has greater weight in determining trade dynamics than the benefit to the bacteria. Quantitative estimates of the relative power of the plant revealed that the plant's influence rises as soil nitrogen availability decreases and trade benefits to both partners increase. Our finding that M. truncatula legumes have more bargaining power than their rhizobial partner at lower nitrogen availabilities highlights the importance of context-dependence for the evolution of mutualism with increasing nutrient deposition.
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Affiliation(s)
- Teresa J Clark
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
| | - Colleen A Friel
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
| | - Emily Grman
- Department of Biology, Eastern Michigan University, 441 Mark Jefferson Science Complex, Ypsilanti, MI, 48197, USA
| | - Maren L Friesen
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
- Department of Plant Pathology, Washington State University, Johnson Hall Rm 345, Pullman, WA, 99164, USA
- Department of Crop and Soil Sciences, Washington State University, Johnson Hall Rm 115, Pullman, WA, 99164, USA
| | - Yair Shachar-Hill
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
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