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Gardner EM, Bruun-Lund S, Niissalo M, Chantarasuwan B, Clement WL, Geri C, Harrison RD, Hipp AL, Holvoet M, Khew G, Kjellberg F, Liao S, Pederneiras LC, Peng YQ, Pereira JT, Phillipps Q, Ahmad Puad AS, Rasplus JY, Sang J, Schou SJ, Velautham E, Weiblen GD, Zerega NJC, Zhang Q, Zhang Z, Baraloto C, Rønsted N. Echoes of ancient introgression punctuate stable genomic lineages in the evolution of figs. Proc Natl Acad Sci U S A 2023; 120:e2222035120. [PMID: 37399402 PMCID: PMC10334730 DOI: 10.1073/pnas.2222035120] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Accepted: 05/11/2023] [Indexed: 07/05/2023] Open
Abstract
Studies investigating the evolution of flowering plants have long focused on isolating mechanisms such as pollinator specificity. Some recent studies have proposed a role for introgressive hybridization between species, recognizing that isolating processes such as pollinator specialization may not be complete barriers to hybridization. Occasional hybridization may therefore lead to distinct yet reproductively connected lineages. We investigate the balance between introgression and reproductive isolation in a diverse clade using a densely sampled phylogenomic study of fig trees (Ficus, Moraceae). Codiversification with specialized pollinating wasps (Agaonidae) is recognized as a major engine of fig diversity, leading to about 850 species. Nevertheless, some studies have focused on the importance of hybridization in Ficus, highlighting the consequences of pollinator sharing. Here, we employ dense taxon sampling (520 species) throughout Moraceae and 1,751 loci to investigate phylogenetic relationships and the prevalence of introgression among species throughout the history of Ficus. We present a well-resolved phylogenomic backbone for Ficus, providing a solid foundation for an updated classification. Our results paint a picture of phylogenetically stable evolution within lineages punctuated by occasional local introgression events likely mediated by local pollinator sharing, illustrated by clear cases of cytoplasmic introgression that have been nearly drowned out of the nuclear genome through subsequent lineage fidelity. The phylogenetic history of figs thus highlights that while hybridization is an important process in plant evolution, the mere ability of species to hybridize locally does not necessarily translate into ongoing introgression between distant lineages, particularly in the presence of obligate plant-pollinator relationships.
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Affiliation(s)
- Elliot M. Gardner
- International Center for Tropical Botany at the Kampong, Institute of Environment, Florida International University, Miami, FL33133
- National Tropical Botanical Garden, Kalāheo, HI96741
- Singapore Botanic Gardens, National Parks Board, 259569, Singapore
| | - Sam Bruun-Lund
- Natural History Museum of Denmark, University of Copenhagen, 1123Copenhagen, Denmark
| | - Matti Niissalo
- Singapore Botanic Gardens, National Parks Board, 259569, Singapore
| | - Bhanumas Chantarasuwan
- Thailand National History Museum, National Science Museum, Klong Luang, Pathum Thani12120, Thailand
| | - Wendy L. Clement
- Department of Biology, The College of New Jersey, Ewing, NJ08618
| | - Connie Geri
- Sarawak Forestry Corporation, 93250Kuching, Sarawak, Malaysia
| | | | | | - Maxime Holvoet
- Natural History Museum of Denmark, University of Copenhagen, 1123Copenhagen, Denmark
| | - Gillian Khew
- Singapore Botanic Gardens, National Parks Board, 259569, Singapore
| | - Finn Kjellberg
- CEFE, CNRS, Université de Montpellier, EPHE, IRD, 34090Montpellier, France
| | - Shuai Liao
- The Morton Arboretum, Lisle, IL60532
- South China Botanical Garden, Chinese Academy of Sciences, 510650Guangzhou, China
- School of Life Sciences, East China Normal University, 200241Shanghai, China
| | - Leandro Cardoso Pederneiras
- Instituto de Pesquisa do Jardim Botânico do Rio de Janeiro, Diretoria de Pesquisa Científica, 22460-030Rio de Janeiro–RJ, Brazil
| | - Yan-Qiong Peng
- Chinese Academy of Sciences, Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, 666303Mengla, China
| | - Joan T. Pereira
- Sabah Forest Research Centre, Sabah Forestry Department, 90175Sandakan, Sabah, Malaysia
| | | | - Aida Shafreena Ahmad Puad
- Faculty of Agriculture & Applied Sciences, i-CATS University College, 93350Kuching, Sarawak, Malaysia
| | - Jean-Yves Rasplus
- CBGP, INRAE, CIRAD, IRD, Montpellier SupAgro, Université de Montpellier, 34988Montpellier, France
| | - Julia Sang
- Sarawak Forest Department, 34988Kuching, Sarawak, Malaysia
| | - Sverre Juul Schou
- Natural History Museum of Denmark, University of Copenhagen, 1123Copenhagen, Denmark
| | - Elango Velautham
- Singapore Botanic Gardens, National Parks Board, 259569, Singapore
| | - George D. Weiblen
- Bell Museum, University of Minnesota, St. Paul, MN55113
- Department of Plant Biology, University of Minnesota, St. Paul, MN55108
| | - Nyree J. C. Zerega
- Plant Biology and Conservation, Northwestern University, Evanston, IL60208
- Negaunee Institute for Plant Conservation and Action, Chicago Botanic Garden, Glencoe, IL60022
| | - Qian Zhang
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, 100093Beijing, China
| | - Zhen Zhang
- School of Life Sciences, East China Normal University, 200241Shanghai, China
| | - Christopher Baraloto
- International Center for Tropical Botany at the Kampong, Institute of Environment, Florida International University, Miami, FL33133
| | - Nina Rønsted
- National Tropical Botanical Garden, Kalāheo, HI96741
- Natural History Museum of Denmark, University of Copenhagen, 1123Copenhagen, Denmark
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Hogan JA, Jusino MA, Smith ME, Corrales A, Song X, Hu YH, Yang J, Cao M, Valverde-Barrantes OJ, Baraloto C. Root-associated fungal communities are influenced more by soils than by plant-host root traits in a Chinese tropical forest. New Phytol 2023; 238:1849-1864. [PMID: 36808625 DOI: 10.1111/nph.18821] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2022] [Accepted: 02/14/2023] [Indexed: 05/04/2023]
Abstract
Forest fungal communities are shaped by the interactions between host tree root systems and the associated soil conditions. We investigated how the soil environment, root morphological traits, and root chemistry influence root-inhabiting fungal communities in three tropical forest sites of varying successional status in Xishuangbanna, China. For 150 trees of 66 species, we measured root morphology and tissue chemistry. Tree species identity was confirmed by sequencing rbcL, and root-associated fungal (RAF) communities were determined using high-throughput ITS2 sequencing. Using distance-based redundancy analysis and hierarchical variation partitioning, we quantified the relative importance of two soil variables (site average total phosphorus and available phosphorus), four root traits (dry matter content, tissue density, specific tip abundance, and forks), and three root tissue elemental concentrations (nitrogen, calcium, and manganese) on RAF community dissimilarity. The root and soil environment collectively explained 23% of RAF compositional variation. Soil phosphorus explained 76% of that variation. Twenty fungal taxa differentiated RAF communities among the three sites. Soil phosphorus most strongly affects RAF assemblages in this tropical forest. Variation in root calcium and manganese concentrations and root morphology among tree hosts, principally an architectural trade-off between dense, highly branched vs less-dense, herringbone-type root systems, are important secondary determinants.
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Affiliation(s)
- J Aaron Hogan
- Department of Biological Sciences, Institute of Environment, Florida International University, Miami, FL, 33199, USA
| | - Michelle A Jusino
- Department of Plant Pathology, University of Florida, Gainesville, FL, 32611, USA
- USDA Forest Service, Northern Research Station, Center for Forest Mycology Research, Madison, WI, 53726, USA
| | - Matthew E Smith
- Department of Plant Pathology, University of Florida, Gainesville, FL, 32611, USA
| | - Adriana Corrales
- Department of Plant Pathology, University of Florida, Gainesville, FL, 32611, USA
- Centro de Investigaciones en Microbiología y Biotecnología-UR (CIMBIUR), Facultad de Ciencias Naturales, Universidad del Rosario, Bogotá, 111221, Colombia
| | - Xiaoyang Song
- CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Yunnan, 666303, China
| | - Yue-Hua Hu
- CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Yunnan, 666303, China
| | - Jie Yang
- CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Yunnan, 666303, China
| | - Min Cao
- CAS Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Yunnan, 666303, China
| | - Oscar J Valverde-Barrantes
- Department of Biological Sciences, Institute of Environment, Florida International University, Miami, FL, 33199, USA
| | - Christopher Baraloto
- Department of Biological Sciences, Institute of Environment, Florida International University, Miami, FL, 33199, USA
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Vleminckx J, Barrantes OV, Fortunel C, Paine CET, Bauman D, Engel J, Petronelli P, Dávila N, Rios M, Sandoval EHV, Mesones I, Allié E, Goret JY, Draper FC, Andino JEG, Béroujon S, Fine PVA, Baraloto C. Niche breadth of Amazonian trees increases with niche optimum across broad edaphic gradients. Ecology 2023:e4053. [PMID: 37079023 DOI: 10.1002/ecy.4053] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 03/21/2023] [Accepted: 03/23/2023] [Indexed: 04/21/2023]
Abstract
Understanding how biotic interactions and environmental filtering mediated by soil properties shape plant community assembly is a major challenge in ecology, especially when studying complex and hyper-diverse ecosystems like tropical forests. To shed light on the influence of both factors, we examined how the edaphic optimum of species (their niche position) relates to their edaphic range (their niche breadth) along different environmental gradients, and how this translates into functional strategies. Here we test four scenarios describing the shape of the niche breadth - niche position relationship, including one neutral scenario and three scenarios proposing different relative influences of abiotic and biotic factors on community assembly along a soil resource gradient. To do so, we used soil concentration data for five key nutrients (N, P, Ca, Mg and K), along with accurate measurements of 14 leaf, stem and root traits for 246 tree species inventoried in 101 plots located across Eastern (French Guiana) and Western (Peru) Amazonia. We found that species niche breadth increased linearly with species niche position along each soil nutrient gradient. This increase was associated with more resource acquisitive traits in the leaves and the roots for soil N, Ca, Mg and K concentration, while it was negatively associated with wood density for soil P concentration. These observations agreed with one of our hypothetical scenarios in which species with resource conservation traits are confined to the most nutrient-depleted soils (abiotic filter), but they are outperformed by faster-growing species on more fertile conditions (biotic filter). Our results refine and strengthen support for niche theories of species assembly, while providing an integrated approach to improve forest management policies.
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Affiliation(s)
- Jason Vleminckx
- Yale Institute for Biospheric Studies (YIBS), Yale University, New Haven, Connecticut, USA
- Department of Biological Sciences, Florida International Univ., Florida, USA
- Plant Ecology and Biogeochemistry lab, Faculty of Sciences, Université Libre de Bruxelles, Brussels, Belgium
| | - Oscar Valverde Barrantes
- Department of Biological Sciences, Florida International Univ., Florida, USA
- International Center for Tropical Botany, Dept of Biological Sciences, Florida International Univ., Miami, Florida, USA
| | - Claire Fortunel
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - C E Timothy Paine
- Environmental and Rural Science, Univ. of New England, Armidale, New South Wales, Australia
| | - David Bauman
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Julien Engel
- International Center for Tropical Botany, Dept of Biological Sciences, Florida International Univ., Miami, Florida, USA
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Pascal Petronelli
- CIRAD, UMR Ecologie des Forêts de Guyane, AgroParisTech, Univ. De Guyane, Univ. Des Antilles, Kourou, France
| | - Nállarett Dávila
- Instituto de Investigaciones de la Amazonia Peruana, Iquitos, Peru, Avenida José A. Quiñones km 2.5, Iquitos, Loreto, Peru
| | - Marcos Rios
- Instituto de Investigaciones de la Amazonia Peruana, Iquitos, Peru, Avenida José A. Quiñones km 2.5, Iquitos, Loreto, Peru
| | | | - Italo Mesones
- Department of Integrative Biology and Jepson Herbaria, University of California, Berkeley, 3040 Valley Life Sciences Building 3140, Berkeley, California, USA
| | - Elodie Allié
- CIRAD, UMR Ecologie des Forêts de Guyane, AgroParisTech, Univ. De Guyane, Univ. Des Antilles, Kourou, France
- INRAe, UMR Ecologie de Forêts de Guyane, AgroParisTech, CIRAD, INRA, Univ. de Guyane, Univ. des Antilles, Kourou, Cedex, France
| | - Jean-Yves Goret
- INRAe, UMR Ecologie de Forêts de Guyane, AgroParisTech, CIRAD, INRA, Univ. de Guyane, Univ. des Antilles, Kourou, Cedex, France
| | - Freddie C Draper
- Center for Global Discovery and Conservation Science, Arizona State University, 1001 South McAllister Avenue Tempe, Tempe, Arizona, USA
| | | | - Solène Béroujon
- EcoFoG, UMR Ecologie des Forêts de Guyane, AgroParisTech, Univ. de Guyane, Univ. des Antilles, Kourou, Cedex, France
| | - Paul V A Fine
- Department of Integrative Biology and Jepson Herbaria, University of California, California, USA
| | - Christopher Baraloto
- Department of Biological Sciences, Florida International Univ., Florida, USA
- International Center for Tropical Botany, Dept of Biological Sciences, Florida International Univ., Miami, Florida, USA
- INRAe, UMR Ecologie de Forêts de Guyane, AgroParisTech, CIRAD, INRA, Univ. de Guyane, Univ. des Antilles, Kourou, Cedex, France
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Hogan JA, Castañeda-Moya E, Lamb-Wotton L, Troxler T, Baraloto C. Water levels primarily drive variation in photosynthesis and nutrient use of scrub Red Mangroves in the southeastern Florida Everglades. Tree Physiol 2022; 42:797-814. [PMID: 35098315 DOI: 10.1093/treephys/tpab151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 11/11/2021] [Indexed: 06/14/2023]
Abstract
We investigated how mangrove-island micro-elevation (i.e., habitat: center vs edge) affects tree physiology in a scrub mangrove forest of the southeastern Everglades. We measured leaf gas exchange rates of scrub Rhizophora mangle L. trees monthly during 2019, hypothesizing that CO2 assimilation (Anet) and stomatal conductance (gsw) would decline with increasing water levels and salinity, expecting more considerable differences at mangrove-island edges than centers, where physiological stress is greatest. Water levels varied between 0 and 60 cm from the soil surface, rising during the wet season (May-October) relative to the dry season (November-April). Porewater salinity ranged from 15 to 30 p.p.t., being higher at mangrove-island edges than centers. Anet maximized at 15.1 μmol m-2 s-1, and gsw was typically <0.2 mol m-2 s-1, both of which were greater in the dry than the wet season and greater at island centers than edges, with seasonal variability being roughly equal to variation between habitats. After accounting for season and habitat, water level positively affected Anet in both seasons but did not affect gsw. Our findings suggest that inundation stress (i.e., water level) is the primary driver of variation in leaf gas exchange rates of scrub mangroves in the Florida Everglades, while also constraining Anet more than gsw. The interaction between inundation stress due to permanent flooding and habitat varies with season as physiological stress is alleviated at higher-elevation mangrove-island center habitats during the dry season. Freshwater inflows during the wet season increase water levels and inundation stress at higher-elevation mangrove-island centers, but also potentially alleviate salt and sulfide stress in soils. Thus, habitat heterogeneity leads to differences in nutrient and water acquisition and use between trees growing in island centers versus edges, creating distinct physiological controls on photosynthesis, which likely affect carbon flux dynamics of scrub mangroves in the Everglades.
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Affiliation(s)
- J Aaron Hogan
- Department of Biological Sciences, Florida International University, 11200 SW 8th Street, OE-167, Miami, FL 33199, USA
| | - Edward Castañeda-Moya
- Institute of Environment, Florida International University, 11200 SW 8th Street, OE-148, Miami, FL 33199, USA
| | - Lukas Lamb-Wotton
- Department of Biological Sciences, Florida International University, 11200 SW 8th Street, OE-167, Miami, FL 33199, USA
| | - Tiffany Troxler
- Institute of Environment, Florida International University, 11200 SW 8th Street, OE-148, Miami, FL 33199, USA
- Department of Earth and Environment, Florida International University, 11200 SW 8th Street, AHC5-360, Miami, FL 33199, USA
| | - Christopher Baraloto
- Department of Biological Sciences, Florida International University, 11200 SW 8th Street, OE-167, Miami, FL 33199, USA
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Hogan JA, Baraloto C, Ficken C, Clark MD, Weston DJ, Warren JM. The physiological acclimation and growth response of Populus trichocarpa to warming. Physiol Plant 2021; 173:1008-1029. [PMID: 34272872 DOI: 10.1111/ppl.13498] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2021] [Revised: 06/16/2021] [Accepted: 07/06/2021] [Indexed: 06/13/2023]
Abstract
Plant metabolic acclimation to thermal stress remains underrepresented in current global climate models. Gaps exist in our understanding of how metabolic processes (i.e., photosynthesis, respiration) acclimate over time and how aboveground versus belowground acclimation differs. We measured the thermal acclimation of Populus trichocarpa, comparing aboveground versus belowground physiology over time. Ninety genetically identical ramets were propagated in mesocosms that separated root and microbial components. After establishment at 25°C for 6 weeks, 60 clones were warmed +4 or +8°C and monitored for 10 weeks, measuring photosynthesis (A), leaf respiration (R), soil respiration (Rs ), root plus soil respiration (Rs+r ), and root respiration (Rr ). We observed thermal acclimation in both A and R, with rates initially increasing, then declining as the thermal photosynthetic optimum (Topt ) and the temperature-sensitivity (Q10 ) of respiration adjusted to warmer conditions. Photosynthetic acclimation was constructive, based on an increase in both Topt and peak A. Belowground, Rs+r decreased linearly with warming, while Rs rates declined abruptly, then remained constant with additional warming. Plant biomass was greatest at +4°C, with 30% allocated belowground. Rates of mass-based Rr were similar among treatments; however, root nitrogen declined at +8°C leading to less mass nitrogen-based Rr in that treatment. The Q10 -temperature relationship of Rr was affected by warming, leading to differing values among treatments. Aboveground acclimation exceeded belowground acclimation, and plant nitrogen-use mediated the acclimatory response. Results suggest that moderate climate warming (+4°C) may lead to acclimation and increased plant biomass production but increases in production could be limited with severe warming (+8°C).
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Affiliation(s)
- J Aaron Hogan
- Department of Biological Sciences, Institute of Environment, Florida International University, Miami, Florida, USA
- Division of Environmental Science, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Christopher Baraloto
- Department of Biological Sciences, Institute of Environment, Florida International University, Miami, Florida, USA
| | - Cari Ficken
- Department of Geology, University at Buffalo, Buffalo, New York, USA
| | - Miranda D Clark
- Division of Biosciences, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - David J Weston
- Division of Biosciences, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Jeffrey M Warren
- Division of Environmental Science, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
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Baraloto C, Vleminckx J, Engel J, Petronelli P, Dávila N, RÍos M, Valderrama Sandoval EH, Mesones I, Guevara Andino JE, Fortunel C, Allie E, Paine CET, Dourdain A, Goret J, Valverde‐Barrantes OJ, Draper F, Fine PVA. Biogeographic history and habitat specialization shape floristic and phylogenetic composition across Amazonian forests. ECOL MONOGR 2021. [DOI: 10.1002/ecm.1473] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Christopher Baraloto
- Institute of Environment Department of Biological Sciences Florida International University 11200 Southwest 8th Street Miami Florida 33199 USA
- INRAE UMR Ecologie des Forêts de Guyane Université de Guyane Université des Antilles Campus agronomique, BP 316 Kourou Cedex 97379 France
| | - Jason Vleminckx
- Institute of Environment Department of Biological Sciences Florida International University 11200 Southwest 8th Street Miami Florida 33199 USA
| | - Julien Engel
- AMAP (botAnique et Modélisation de l’Architecture des Plantes et des végétations) Université de Montpellier, CIRAD, CNRS, INRAE, IRD Boulevard de la Lironde Montpellier Cedex 5 TA A‐51/PS234398 France
| | - Pascal Petronelli
- CIRAD, UMR Ecologie des Forêts de Guyane Université de Guyane Université des Antilles Campus agronomique, BP 316 Kourou Cedex 97379 France
| | - Nállarett Dávila
- Instituto de Investigaciones de la Amazonia Peruana Iquitos, Peru, Avenida José A. Quiñones km 2.5 Iquitos Loreto Perú
| | - Marcos RÍos
- Instituto de Investigaciones de la Amazonia Peruana Iquitos, Peru, Avenida José A. Quiñones km 2.5 Iquitos Loreto Perú
| | | | - Italo Mesones
- Department of Integrative Biology and Jepson Herbaria University of California, Berkeley 3040 Valley Life Sciences Building 3140 Berkeley California 94720‐3140 USA
| | | | - Claire Fortunel
- AMAP (botAnique et Modélisation de l’Architecture des Plantes et des végétations) Université de Montpellier, CIRAD, CNRS, INRAE, IRD Boulevard de la Lironde Montpellier Cedex 5 TA A‐51/PS234398 France
| | - Elodie Allie
- INRAE UMR Ecologie des Forêts de Guyane Université de Guyane Université des Antilles Campus agronomique, BP 316 Kourou Cedex 97379 France
| | - C. E. Timothy Paine
- Environmental and Rural Sciences University of New England Armidale New South Wales 2351 Australia
| | - Aurélie Dourdain
- CIRAD, UMR Ecologie des Forêts de Guyane Université de Guyane Université des Antilles Campus agronomique, BP 316 Kourou Cedex 97379 France
| | - Jean‐Yves Goret
- INRAE UMR Ecologie des Forêts de Guyane Université de Guyane Université des Antilles Campus agronomique, BP 316 Kourou Cedex 97379 France
| | - Oscar J. Valverde‐Barrantes
- Institute of Environment Department of Biological Sciences Florida International University 11200 Southwest 8th Street Miami Florida 33199 USA
| | - Freddie Draper
- Institute of Environment Department of Biological Sciences Florida International University 11200 Southwest 8th Street Miami Florida 33199 USA
- Center for Global Discovery and Conservation Science Arizona State University 1001 South McAllister Avenue Tempe Tempe Arizona 85287 USA
- School of Geography University of Leeds Woodhouse Leeds LS2 9JT UK
| | - Paul V. A. Fine
- Department of Integrative Biology and Jepson Herbaria University of California, Berkeley 3040 Valley Life Sciences Building 3140 Berkeley California 94720‐3140 USA
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7
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Draper FC, Costa FRC, Arellano G, Phillips OL, Duque A, Macía MJ, Ter Steege H, Asner GP, Berenguer E, Schietti J, Socolar JB, de Souza FC, Dexter KG, Jørgensen PM, Tello JS, Magnusson WE, Baker TR, Castilho CV, Monteagudo-Mendoza A, Fine PVA, Ruokolainen K, Coronado ENH, Aymard G, Dávila N, Sáenz MS, Paredes MAR, Engel J, Fortunel C, Paine CET, Goret JY, Dourdain A, Petronelli P, Allie E, Andino JEG, Brienen RJW, Pérez LC, Manzatto ÂG, Zambrana NYP, Molino JF, Sabatier D, Chave J, Fauset S, Villacorta RG, Réjou-Méchain M, Berry PE, Melgaço K, Feldpausch TR, Sandoval EV, Martinez RV, Mesones I, Junqueira AB, Roucoux KH, de Toledo JJ, Andrade AC, Camargo JL, Del Aguila Pasquel J, Santana FD, Laurance WF, Laurance SG, Lovejoy TE, Comiskey JA, Galbraith DR, Kalamandeen M, Aguilar GEN, Arenas JV, Guerra CAA, Flores M, Llampazo GF, Montenegro LAT, Gomez RZ, Pansonato MP, Moscoso VC, Vleminckx J, Barrantes OJV, Duivenvoorden JF, de Sousa SA, Arroyo L, Perdiz RO, Cravo JS, Marimon BS, Junior BHM, Carvalho FA, Damasco G, Disney M, Vital MS, Diaz PRS, Vicentini A, Nascimento H, Higuchi N, Van Andel T, Malhi Y, Ribeiro SC, Terborgh JW, Thomas RS, Dallmeier F, Prieto A, Hilário RR, Salomão RP, Silva RDC, Casas LF, Vieira ICG, Araujo-Murakami A, Arevalo FR, Ramírez-Angulo H, Torre EV, Peñuela MC, Killeen TJ, Pardo G, Jimenez-Rojas E, Castro W, Cabrera DG, Pipoly J, de Sousa TR, Silvera M, Vos V, Neill D, Vargas PN, Vela DM, Aragão LEOC, Umetsu RK, Sierra R, Wang O, Young KR, Prestes NCCS, Massi KG, Huaymacari JR, Gutierrez GAP, Aldana AM, Alexiades MN, Baccaro F, Céron C, Muelbert AE, Rios JMG, Lima AS, Lloyd JL, Pitman NCA, Gamarra LV, Oroche CJC, Fuentes AF, Palacios W, Patiño S, Torres-Lezama A, Baraloto C. Amazon tree dominance across forest strata. Nat Ecol Evol 2021; 5:757-767. [PMID: 33795854 DOI: 10.1038/s41559-021-01418-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Accepted: 02/18/2021] [Indexed: 02/01/2023]
Abstract
The forests of Amazonia are among the most biodiverse plant communities on Earth. Given the immediate threats posed by climate and land-use change, an improved understanding of how this extraordinary biodiversity is spatially organized is urgently required to develop effective conservation strategies. Most Amazonian tree species are extremely rare but a few are common across the region. Indeed, just 227 'hyperdominant' species account for >50% of all individuals >10 cm diameter at 1.3 m in height. Yet, the degree to which the phenomenon of hyperdominance is sensitive to tree size, the extent to which the composition of dominant species changes with size class and how evolutionary history constrains tree hyperdominance, all remain unknown. Here, we use a large floristic dataset to show that, while hyperdominance is a universal phenomenon across forest strata, different species dominate the forest understory, midstory and canopy. We further find that, although species belonging to a range of phylogenetically dispersed lineages have become hyperdominant in small size classes, hyperdominants in large size classes are restricted to a few lineages. Our results demonstrate that it is essential to consider all forest strata to understand regional patterns of dominance and composition in Amazonia. More generally, through the lens of 654 hyperdominant species, we outline a tractable pathway for understanding the functioning of half of Amazonian forests across vertical strata and geographical locations.
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Affiliation(s)
- Frederick C Draper
- Institute of Environment, Department of Biological Sciences, Florida International University, Miami, FL, USA. .,School of Geography, University of Leeds, Leeds, UK. .,Center for Global Discovery and Conservation Science, Arizona State University, Tempe, AZ, USA.
| | - Flavia R C Costa
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | - Gabriel Arellano
- Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA
| | | | - Alvaro Duque
- Departamento de Ciencias Forestales, Universidad Nacional de Colombia, Medellín, Colombia
| | - Manuel J Macía
- Departamento de Biología, Universidad Autónoma de Madrid, Madrid, Spain.,Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
| | - Hans Ter Steege
- Naturalis Biodiversity Center, Leiden, The Netherlands.,Systems Ecology, Vrije Universiteit, Amsterdam, The Netherlands
| | - Gregory P Asner
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, AZ, USA
| | - Erika Berenguer
- Lancaster Environment Centre, Lancaster University, Lancaster, UK.,Environmental Change Institute, University of Oxford, Oxford, UK
| | - Juliana Schietti
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | - Jacob B Socolar
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway
| | | | - Kyle G Dexter
- School of Geosciences, University of Edinburgh, Edinburgh, UK
| | | | | | | | | | | | | | - Paul V A Fine
- Department of Intergrative Biology, University of California Berkeley, Berkeley, CA, USA
| | | | | | - Gerardo Aymard
- UNELLEZ-Guanare, Programa de Ciencias del Agro y el Mar, Herbario Universitario (PORT), Mesa de Cavacas, Venezuela.,Compensation International Progress S. A.-Ciprogress Greenlife, Bogotá, Colombia
| | - Nállarett Dávila
- Instituto de Investigaciones de la Amazonía Peruana, Iquitos, Peru
| | - Mauricio Sánchez Sáenz
- Departamento de Ciencias Forestales, Universidad Nacional de Colombia, Medellín, Colombia
| | | | - Julien Engel
- AMAP, Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Claire Fortunel
- AMAP, Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - C E Timothy Paine
- Environmental and Rural Science, University of New England, Armidale, New South Wales, Australia
| | - Jean-Yves Goret
- INRA, UMR EcoFoG, AgroParisTech, CNRS, CIRAD, Université des Antilles, Université de Guyane, Kourou, French Guiana
| | | | | | - Elodie Allie
- INRA, UMR EcoFoG, AgroParisTech, CNRS, CIRAD, Université des Antilles, Université de Guyane, Kourou, French Guiana
| | | | | | | | - Ângelo G Manzatto
- Departamento de Biologia, Universidade Federal de Rondônia, Porto Velho, Brazil
| | | | | | - Daniel Sabatier
- AMAP, Université de Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier, France
| | - Jerôme Chave
- Laboratoire Evolution et Diversité Biologique (EDB) CNRS/UPS, Toulouse, France
| | - Sophie Fauset
- School of Geography, Earth and Environmental Sciences, University of Plymouth, Plymouth, UK
| | | | | | - Paul E Berry
- Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA
| | - Karina Melgaço
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | | | | | | | - Italo Mesones
- Department of Intergrative Biology, University of California Berkeley, Berkeley, CA, USA
| | - André B Junqueira
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil.,Institut de Ciència i Tecnologia Ambientals, Universitat Autònoma de Barcelona, Barcelona, Spain
| | - Katherine H Roucoux
- School of Geography & Sustainable Development, University of St Andrews, St Andrews, UK
| | - José J de Toledo
- Department of Environment and Development, Federal University of Amapá, Macapa, Brazil
| | - Ana C Andrade
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | | | | | - Flávia D Santana
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | - William F Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental Sciences, James Cook University, Cairns, Queensland, Australia
| | - Susan G Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental Sciences, James Cook University, Cairns, Queensland, Australia
| | - Thomas E Lovejoy
- Department of Environmental Science and Policy, George Mason University, Fairfax, VA, USA
| | - James A Comiskey
- Inventory and Monitoring Program, National Park Service, Fredericksburg, VA, USA.,Smithsonian Institution, Washington DC, USA
| | | | - Michelle Kalamandeen
- Department of Plant Sciences, University of Cambridge, Cambridge, UK.,Living with Lakes Centre, Laurentian University, Greater Sudbury, Ontario, Canada
| | | | - Jim Vega Arenas
- Facultad de Ciencias Biológicas, Universidad Nacional de la Amazonía Peruana, Iquito, Peru
| | | | - Manuel Flores
- Facultad de Ciencias Biológicas, Universidad Nacional de la Amazonía Peruana, Iquito, Peru
| | | | | | | | | | - Victor Chama Moscoso
- Universidad Nacional de San Antonio Abad del Cusco, Cusco, Peru.,Estación Biológica del Jardín Botánico de Missouri, Oxapampa, Peru
| | - Jason Vleminckx
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, AZ, USA
| | | | - Joost F Duivenvoorden
- Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | | | - Luzmila Arroyo
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz, Bolivia
| | - Ricardo O Perdiz
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | | | - Beatriz S Marimon
- Faculdade de Ciências Agrárias, Biológicas e Sociais Aplicadas, Universidad do Estado de Mato Grosso, Nova Xavantina, Brazil
| | - Ben Hur Marimon Junior
- Faculdade de Ciências Agrárias, Biológicas e Sociais Aplicadas, Universidad do Estado de Mato Grosso, Nova Xavantina, Brazil
| | | | - Gabriel Damasco
- Department of Ecology, Evolution and Behaviour, University of Minnesota, Minneapolis, MN, USA
| | - Mathias Disney
- Department of Geography, University College London, London, UK
| | - Marcos Salgado Vital
- Centro de Estudos da Biodiversidade, Universidade Federal de Roraima, Boa Vista, Brazil
| | - Pablo R Stevenson Diaz
- Departamento de Ciencias Biológicas, Universidad de Los Andes (Colombia), Bogotá, Colombia
| | | | | | - Niro Higuchi
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | | | - Yadvinder Malhi
- Environmental Change Institute, University of Oxford, Oxford, UK
| | - Sabina Cerruto Ribeiro
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, Brazil
| | - John W Terborgh
- Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - Raquel S Thomas
- Iwokrama International Centre for Rainforest Conservation and Development, Georgetown, Guyana
| | - Francisco Dallmeier
- Smithsonian's National Zoo & Conservation Biology Institute, Washington DC, USA
| | - Adriana Prieto
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Renato R Hilário
- Department of Environment and Development, Federal University of Amapá, Macapa, Brazil
| | - Rafael P Salomão
- Universidade Federal Rural da Amazônia-UFRA/CAPES, Belém, Brazil.,Museu Paraense Emílio Goeldi, Belém, Brasil
| | | | - Luisa F Casas
- Laboratorio de Ecología de Bosques Tropicales y Primatología, Fundación Natura Colombia, Universidad de Los Andes, Bogotá, Colombia
| | | | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz, Bolivia
| | | | - Hirma Ramírez-Angulo
- Institute of Research for Forestry Development, Universidad de los Andes, Merida, Venezuela
| | - Emilio Vilanova Torre
- Institute of Research for Forestry Development, Universidad de los Andes, Merida, Venezuela.,School of Environmental and Forest Sciences (SEFS), University of Washington, Seattle, WA, USA
| | | | | | - Guido Pardo
- Universidad Autónoma del Beni, Riberalta, Bolivia
| | - Eliana Jimenez-Rojas
- Instituto Amazónico de Investigaciones (IMANI), Universidad Nacional de Colombia, Sede Amazonia, Brazil
| | - Wenderson Castro
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, Brazil
| | | | - John Pipoly
- Broward County Parks and Recreation, Miami, FL, USA.,Biological Sciences, Florida Atlantic University-Davie, Miami, FL, USA
| | | | - Marcos Silvera
- Museu Universitário, Universidade Federal do Acre, Rio Branco, Brazil
| | - Vincent Vos
- Universidad Autónoma del Beni, Riberalta, Bolivia
| | - David Neill
- Facultad de Ingeniería Ambiental, Universidad Estatal Amazónica, Puyo, Ecuador
| | | | - Dilys M Vela
- Department of Biology, Washington University in St Louis, St Louis, MO, USA
| | - Luiz E O C Aragão
- National Institute for Space Research (INPE), São José dos Campos, Brazil
| | - Ricardo Keichi Umetsu
- Faculdade de Ciências Agrárias, Biológicas e Sociais Aplicadas, Universidad do Estado de Mato Grosso, Nova Xavantina, Brazil
| | | | - Ophelia Wang
- School of Earth Sciences and Environmental Sustainability, Northern Arizona University, Flagstaff, AZ, USA
| | - Kenneth R Young
- Department of Geography and the Environment, University of Texas at Austin, Austin, TX, USA
| | - Nayane C C S Prestes
- Faculdade de Ciências Agrárias, Biológicas e Sociais Aplicadas, Universidad do Estado de Mato Grosso, Nova Xavantina, Brazil
| | - Klécia G Massi
- Instituto de Ciência e Tecnologia, São Paulo State University (UNESP), São José dos Campos, Brazil
| | | | - Germaine A Parada Gutierrez
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz, Bolivia
| | - Ana M Aldana
- Departamento de Ciencias Biológicas, Universidad de Los Andes (Colombia), Bogotá, Colombia
| | - Miguel N Alexiades
- School of Anthropology and Conservation, University of Kent, Canterbury, UK
| | | | - Carlos Céron
- Herbario Alfredo Paredes (QAP), Universidad Central del Ecuador, Quito, Ecuador
| | | | | | | | - Jonathan L Lloyd
- Department of Life Sciences, Imperial College London, London, UK
| | | | | | | | - Alfredo F Fuentes
- Instituto de Ecología, Herbario Nacional de Bolivia, La Paz, Bolivia
| | - Walter Palacios
- Universidad Tecnica del Norte, Herbario Nacional del Ecuador, Quito, Ecuador
| | - Sandra Patiño
- Research Institute Alexander von Humboldt, Bogotá, Colombia
| | - Armando Torres-Lezama
- Institute of Research for Forestry Development, Universidad de los Andes, Merida, Venezuela
| | - Christopher Baraloto
- Institute of Environment, Department of Biological Sciences, Florida International University, Miami, FL, USA
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8
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Vleminckx J, Fortunel C, Valverde‐Barrantes O, Timothy Paine CE, Engel J, Petronelli P, Dourdain AK, Guevara J, Béroujon S, Baraloto C. Resolving whole‐plant economics from leaf, stem and root traits of 1467 Amazonian tree species. OIKOS 2021. [DOI: 10.1111/oik.08284] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Jason Vleminckx
- Dept of Biological Sciences, Florida International Univ. FL USA
- Yale Inst. for Biospheric Studies New Haven CT USA
| | - Claire Fortunel
- AMAP (botAnique et Modélisation de l'Architecture des Plantes et des Végétations), Univ. de Montpellier, CIRAD, CNRS, INRAE, IRD Montpellier Cedex 5 France
| | | | - C. E. Timothy Paine
- Environmental and Rural Science, Univ. of New England Armidale New South Wales Australia
| | - Julien Engel
- AMAP (botAnique et Modélisation de l'Architecture des Plantes et des Végétations), Univ. de Montpellier, CIRAD, CNRS, INRAE, IRD Montpellier Cedex 5 France
- International Center for Tropical Botany, Dept of Biological Sciences, Florida International Univ. Miami FL USA
| | - Pascal Petronelli
- CIRAD, UMR Ecologie des Forêts de Guyane, AgroParisTech, Univ. de Guyane, Univ. des Antilles Kourou Cedex France
| | - Aurélie K. Dourdain
- CIRAD, UMR Ecologie des Forêts de Guyane, AgroParisTech, Univ. de Guyane, Univ. des Antilles Kourou Cedex France
| | | | - Solène Béroujon
- UMR Ecologie des Forêts de Guyane, AgroParisTech, Univ. de Guyane, Univ. des Antilles Kourou Cedex France
| | - Christopher Baraloto
- Dept of Biological Sciences, Florida International Univ. FL USA
- INRAe, UMR Ecologie de Forêts de Guyane, AgroParisTech, CIRAD, INRA, Univ. de Guyane, Univ. des Antilles Kourou Cedex France
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9
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Damasco G, Baraloto C, Vicentini A, Daly DC, Baldwin BG, Fine PVA. Revisiting the hyperdominance of Neotropical tree species under a taxonomic, functional and evolutionary perspective. Sci Rep 2021; 11:9585. [PMID: 33953271 PMCID: PMC8099866 DOI: 10.1038/s41598-021-88417-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 03/30/2021] [Indexed: 11/29/2022] Open
Abstract
Recent studies have leveraged large datasets from plot-inventory networks to report a phenomenon of hyperdominance in Amazonian tree communities, concluding that few species are common and many are rare. However, taxonomic hypotheses may not be consistent across these large plot networks, potentially masking cryptic diversity and threatened rare taxa. In the current study, we have reviewed one of the most abundant putatively hyperdominant taxa, Protium heptaphyllum (Aubl.) Marchand (Burseraceae), long considered to be a taxonomically difficult species complex. Using morphological, genomic, and functional data, we present evidence that P. heptaphyllum sensu lato may represent eight separately evolving lineages, each warranting species status. Most of these lineages are geographically restricted, and few if any of them could be considered hyperdominant on their own. In addition, functional trait data are consistent with the hypothesis that trees from each lineage are adapted to distinct soil and climate conditions. Moreover, some of the newly discovered species are rare, with habitats currently experiencing rapid deforestation. We highlight an urgent need to improve sampling and methods for species discovery in order to avoid oversimplified assumptions regarding diversity and rarity in the tropics and the implications for ecosystem functioning and conservation.
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Affiliation(s)
- Gabriel Damasco
- Department of Integrative Biology, University of California, Berkeley, CA, 94720-3140, USA. .,Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande do Norte, Natal, RN, 59072-970, Brazil.
| | - Christopher Baraloto
- Institute of Environment, Florida International University, Miami, FL, 33133, USA
| | - Alberto Vicentini
- Programa de Pós-Graduação em Botânica, Instituto Nacional de Pesquisas da Amazônia, Manaus, AM, 69080-971, Brazil
| | - Douglas C Daly
- Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY, 10458, USA
| | - Bruce G Baldwin
- Department of Integrative Biology, University of California, Berkeley, CA, 94720-3140, USA
| | - Paul V A Fine
- Department of Integrative Biology, University of California, Berkeley, CA, 94720-3140, USA
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10
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Valverde-Barrantes OJ, Authier L, Schimann H, Baraloto C. Root anatomy helps to reconcile observed root trait syndromes in tropical tree species. Am J Bot 2021; 108:744-755. [PMID: 34028799 DOI: 10.1002/ajb2.1659] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Accepted: 12/31/2020] [Indexed: 06/12/2023]
Abstract
PREMISE Studying the organization of functional traits in plant leaves and stems has revealed notable patterns linking function and form; however, evidence of similarly robust organization in root tissues remains controversial. We posit that anatomical traits in roots can provide insight on the overall organization of the root system. We hypothesized that size variation in the tissue outside the stele is related in a nonlinear fashion with functional traits associated with direct resource uptake, including a negative relationship with root architectural traits, and that similar relationships detected in tropical areas also hold true in other biomes. METHODS We addressed our hypotheses using empirical data from 24 tropical tree species in French Guiana, including anatomical measurements in first order roots and functional trait description for the entire fine root system. In addition, we compiled a global meta-analysis of root traits for 500+ forest species across tropical, subtropical, and temperate forests. RESULTS Our results supported the expected nonlinear relationships between cortical size and morphological traits and a negative linear trend with architectural traits. We confirmed a global negative relationship among specific root length (SRL), diameter, and tissue density, suggesting similar anatomical constraints in root systems across woody plants. However, the importance of factors varies across biomes, possibly related to the unequal phylogenetic representation across latitudes. CONCLUSIONS Our findings imply that the rhizocentric hypothesis can be a valuable approach to understand fine root trait syndromes and the evolution of absorptive roots in vascular plants.
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Affiliation(s)
- Oscar J Valverde-Barrantes
- Institute of Environment, International Center of Tropical Biodiversity, Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
| | - Louise Authier
- INRAE - UMR Écologie des Forêts de Guyane (CNRS, AgroParisTech, CIRAD, Université de Guyane, Université des Antilles), Kourou, France
| | - Heidy Schimann
- INRAE - UMR Écologie des Forêts de Guyane (CNRS, AgroParisTech, CIRAD, Université de Guyane, Université des Antilles), Kourou, France
| | - Christopher Baraloto
- Institute of Environment, International Center of Tropical Biodiversity, Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
- INRAE - UMR Écologie des Forêts de Guyane (CNRS, AgroParisTech, CIRAD, Université de Guyane, Université des Antilles), Kourou, France
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11
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Esquivel-Muelbert A, Phillips OL, Brienen RJW, Fauset S, Sullivan MJP, Baker TR, Chao KJ, Feldpausch TR, Gloor E, Higuchi N, Houwing-Duistermaat J, Lloyd J, Liu H, Malhi Y, Marimon B, Marimon Junior BH, Monteagudo-Mendoza A, Poorter L, Silveira M, Torre EV, Dávila EA, Del Aguila Pasquel J, Almeida E, Loayza PA, Andrade A, Aragão LEOC, Araujo-Murakami A, Arets E, Arroyo L, Aymard C GA, Baisie M, Baraloto C, Camargo PB, Barroso J, Blanc L, Bonal D, Bongers F, Boot R, Brown F, Burban B, Camargo JL, Castro W, Moscoso VC, Chave J, Comiskey J, Valverde FC, da Costa AL, Cardozo ND, Di Fiore A, Dourdain A, Erwin T, Llampazo GF, Vieira ICG, Herrera R, Honorio Coronado E, Huamantupa-Chuquimaco I, Jimenez-Rojas E, Killeen T, Laurance S, Laurance W, Levesley A, Lewis SL, Ladvocat KLLM, Lopez-Gonzalez G, Lovejoy T, Meir P, Mendoza C, Morandi P, Neill D, Nogueira Lima AJ, Vargas PN, de Oliveira EA, Camacho NP, Pardo G, Peacock J, Peña-Claros M, Peñuela-Mora MC, Pickavance G, Pipoly J, Pitman N, Prieto A, Pugh TAM, Quesada C, Ramirez-Angulo H, de Almeida Reis SM, Rejou-Machain M, Correa ZR, Bayona LR, Rudas A, Salomão R, Serrano J, Espejo JS, Silva N, Singh J, Stahl C, Stropp J, Swamy V, Talbot J, Ter Steege H, Terborgh J, Thomas R, Toledo M, Torres-Lezama A, Gamarra LV, van der Heijden G, van der Meer P, van der Hout P, Martinez RV, Vieira SA, Cayo JV, Vos V, Zagt R, Zuidema P, Galbraith D. Author Correction: Tree mode of death and mortality risk factors across Amazon forests. Nat Commun 2021; 12:209. [PMID: 33397985 PMCID: PMC7782710 DOI: 10.1038/s41467-020-20537-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
Affiliation(s)
- Adriane Esquivel-Muelbert
- School of Geography, Earth and Enviornmental Sciences, University of Birmingham, Birmingham, UK. .,School of Geography, University of Leeds, Leeds, UK. .,Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK.
| | | | | | - Sophie Fauset
- School of Geography, Earth and Environmental Sciences, University of Plymouth, Plymouth, UK
| | - Martin J P Sullivan
- School of Geography, University of Leeds, Leeds, UK.,Department of Natural Sciences, Manchester Metropolitan University, Manchester, UK
| | | | - Kuo-Jung Chao
- International Master Program of Agriculture, National Chung Hsing University, Taichung, Taiwan
| | - Ted R Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | | | - Niro Higuchi
- Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | | | - Jon Lloyd
- Faculty of Natural Sciences, Department of Life, Imperial College London Sciences, London, UK
| | - Haiyan Liu
- School of Mathematics, University of Leeds, Leeds, UK
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Beatriz Marimon
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - Ben Hur Marimon Junior
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | | | - Lourens Poorter
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
| | - Marcos Silveira
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | - Emilio Vilanova Torre
- Instituto de Investigaciones para el Desarrollo Forestal (INDEFOR), Universidad de Los Andes, Mérida, Venezuela.,University of California, Berkeley, CA, USA
| | - Esteban Alvarez Dávila
- Escuela de Ciencias Agropecuarias y Ambientales, Universidad Nacional Abierta y a Distancia, Boyacá, Colombia.,Fundación ConVida, Medellín, Colombia
| | | | - Everton Almeida
- Instituto de Biodiversidade e Florestas, Universidade Federal do Oeste do Pará, Santarém, Brazil
| | - Patricia Alvarez Loayza
- Center for Tropical Conservation, Nicholas School of the Environment, University in Durham, Durham, NC, USA
| | - Ana Andrade
- Projeto Dinâmica Biológica de Fragmentos, Instituto Nacional de Pesquisas da Amazônia Florestais, Manaus, AM, Brazil
| | - Luiz E O C Aragão
- National Institute for Space Research (INPE), São José dos Campos, SP, Brazil
| | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz de la Sierra, Bolivia
| | - Eric Arets
- Wageningen Environmental Research, Wageningen University and Research, Wageningen, Netherlands
| | - Luzmila Arroyo
- Dirección de la Carrera de Biología, Universidad Autónoma Gabriel René Moreno, Santa Cruz de la Sierra, Bolivia
| | - Gerardo A Aymard C
- UNELLEZ-Guanare, Herbario Universitario (PORT), Portuguesa, Venezuela Compensation International Progress S.A. Ciprogress-Greenlife, Bogotá, D.C., Colombia
| | - Michel Baisie
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - Christopher Baraloto
- Department of Biological Sciences, International Center for Tropical Botany, Florida International University, Miami, FL, USA
| | | | - Jorcely Barroso
- Universidade Federal do Acre, Campus Floresta, Cruzeiro do Sul, Brazil
| | - Lilian Blanc
- UR Forest & Societies, CIRAD, Montpellier, France
| | - Damien Bonal
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - Frans Bongers
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
| | - René Boot
- Department of Biology, Utrecht, Netherlands
| | | | - Benoit Burban
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - José Luís Camargo
- Projeto Dinâmica Biológica de Fragmentos, Instituto Nacional de Pesquisas da Amazônia Florestais, Manaus, AM, Brazil
| | - Wendeson Castro
- Laboratório de Botânica e Ecologia Vegetal, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | | | - Jerome Chave
- Laboratoire Evolution et Diversite Biologique, CNRS, Toulouse, France
| | - James Comiskey
- Inventory and Monitoring Program, National Park Service, Fort Collins, CO, USA
| | | | - Antonio Lola da Costa
- Instituto de Geociências, Faculdade de Meteorologia, Universidade Federal do Para, Belém, Brazil
| | | | - Anthony Di Fiore
- Department of Anthropology and Primate Molecular Ecology and Evolution Laboratory, University of Texas, Austin, TX, USA
| | - Aurélie Dourdain
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - Terry Erwin
- National Museum of Natural History, Smithsonian Institute, Washington, DC, USA
| | | | | | - Rafael Herrera
- Instituto Venezolano de Investigaciones Científicas (IVIC), Caracas, Venezuela.,IIAMA, Universitat Politécnica de València, València, Spain
| | | | | | - Eliana Jimenez-Rojas
- Instituto Amazónico de Investigaciones Imani, Universidad Nacional de Colombia Sede Amazonia, Leticia, Colombia
| | | | - Susan Laurance
- College of Science and Engineering, James Cook University, Cairns, QLD, Australia
| | - William Laurance
- College of Science and Engineering, James Cook University, Cairns, QLD, Australia
| | | | - Simon L Lewis
- School of Geography, University of Leeds, Leeds, UK.,Department of Geography, University College London, London, UK
| | | | | | - Thomas Lovejoy
- Environmental Science and Policy, George Mason University, Fairfax, VA, USA
| | - Patrick Meir
- Research School of Biology, Australian National University, Canberra, ACT, Australia.,School of Geosciences, University of Edinburgh, Edinburgh, UK
| | - Casimiro Mendoza
- Escuela de Ciencias Forestales, Unidad Académica del Trópico, Universidad Mayor de San Simón, Cochabamba, Bolivia
| | - Paulo Morandi
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - David Neill
- Facultad de Ingeniería Ambiental, Universidad Estatal Amazónica, Puyo, Ecuador
| | | | | | - Edmar Almeida de Oliveira
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - Nadir Pallqui Camacho
- School of Geography, University of Leeds, Leeds, UK.,Universidad Nacional de San Antonio Abad del Cusco, Cusco, Perú
| | - Guido Pardo
- Universidad Autónoma del Beni José Ballivián, Trinidad, Bolivia
| | | | - Marielos Peña-Claros
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
| | | | | | - John Pipoly
- Broward County Parks Recreation, Oakland Park, FL, USA
| | - Nigel Pitman
- Keller Science Action Center, Field Museum, Chicago, IL, USA
| | - Adriana Prieto
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Thomas A M Pugh
- School of Geography, Earth and Enviornmental Sciences, University of Birmingham, Birmingham, UK.,Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK
| | - Carlos Quesada
- Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | - Hirma Ramirez-Angulo
- Institute of Research for Forestry Development (INDEFOR), Universidad de los Andes, Mérida, Venezuela
| | - Simone Matias de Almeida Reis
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK.,UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - Maxime Rejou-Machain
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | | | - Lily Rodriguez Bayona
- Centro de Conservacion, Investigacion y Manejo de Areas Naturales, CIMA Cordillera Azul, Lima, Peru
| | - Agustín Rudas
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Rafael Salomão
- Museu Paraense Emílio Goeldi, Belém, Brazil.,Universidade Federal Rural da Amazônia, Belém, Brazil
| | - Julio Serrano
- Instituto de Investigaciones para el Desarrollo Forestal (INDEFOR), Universidad de Los Andes, Mérida, Venezuela
| | - Javier Silva Espejo
- Universidad Nacional de San Antonio Abad del Cusco, Cusco, Perú.,Departamento de Biología, Universidad de La Serena, La Serena, Chile
| | | | - James Singh
- Guyana Forestry Commission, Georgetown, Guyana
| | - Clement Stahl
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | | | - Varun Swamy
- Institute for Conservation Research, Escondido, CA, USA
| | - Joey Talbot
- Institute for Transport Studies, University of Leeds, Leeds, UK
| | - Hans Ter Steege
- Biodiversity Dynamics, Naturalis Biodiversity Center, Leiden, The Netherlands.,Systems Ecology, Free University, De Boelelaan 1087, Amsterdam, Netherlands
| | - John Terborgh
- Department of Biology, University of Florida, Gainesville, FL, USA
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development, Georgetown, Guyana
| | - Marisol Toledo
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz de la Sierra, Bolivia
| | | | | | | | - Peter van der Meer
- Van Hall Larenstein University of Applied Sciences, Leeuwarden, Netherlands
| | | | | | - Simone Aparecida Vieira
- Núcleo de Estudos e Pesquisas Ambientais - Universidade Estadual de Campinas, Campinas, Brazil
| | | | - Vincent Vos
- Universidad Autónoma del Beni José Ballivián, Trinidad, Bolivia
| | | | - Pieter Zuidema
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
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12
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Esquivel-Muelbert A, Phillips OL, Brienen RJW, Fauset S, Sullivan MJP, Baker TR, Chao KJ, Feldpausch TR, Gloor E, Higuchi N, Houwing-Duistermaat J, Lloyd J, Liu H, Malhi Y, Marimon B, Marimon Junior BH, Monteagudo-Mendoza A, Poorter L, Silveira M, Torre EV, Dávila EA, Del Aguila Pasquel J, Almeida E, Loayza PA, Andrade A, Aragão LEOC, Araujo-Murakami A, Arets E, Arroyo L, Aymard C GA, Baisie M, Baraloto C, Camargo PB, Barroso J, Blanc L, Bonal D, Bongers F, Boot R, Brown F, Burban B, Camargo JL, Castro W, Moscoso VC, Chave J, Comiskey J, Valverde FC, da Costa AL, Cardozo ND, Di Fiore A, Dourdain A, Erwin T, Llampazo GF, Vieira ICG, Herrera R, Honorio Coronado E, Huamantupa-Chuquimaco I, Jimenez-Rojas E, Killeen T, Laurance S, Laurance W, Levesley A, Lewis SL, Ladvocat KLLM, Lopez-Gonzalez G, Lovejoy T, Meir P, Mendoza C, Morandi P, Neill D, Nogueira Lima AJ, Vargas PN, de Oliveira EA, Camacho NP, Pardo G, Peacock J, Peña-Claros M, Peñuela-Mora MC, Pickavance G, Pipoly J, Pitman N, Prieto A, Pugh TAM, Quesada C, Ramirez-Angulo H, de Almeida Reis SM, Rejou-Machain M, Correa ZR, Bayona LR, Rudas A, Salomão R, Serrano J, Espejo JS, Silva N, Singh J, Stahl C, Stropp J, Swamy V, Talbot J, Ter Steege H, Terborgh J, Thomas R, Toledo M, Torres-Lezama A, Gamarra LV, van der Heijden G, van der Meer P, van der Hout P, Martinez RV, Vieira SA, Cayo JV, Vos V, Zagt R, Zuidema P, Galbraith D. Tree mode of death and mortality risk factors across Amazon forests. Nat Commun 2020; 11:5515. [PMID: 33168823 PMCID: PMC7652827 DOI: 10.1038/s41467-020-18996-3] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2019] [Accepted: 09/09/2020] [Indexed: 12/16/2022] Open
Abstract
The carbon sink capacity of tropical forests is substantially affected by tree mortality. However, the main drivers of tropical tree death remain largely unknown. Here we present a pan-Amazonian assessment of how and why trees die, analysing over 120,000 trees representing > 3800 species from 189 long-term RAINFOR forest plots. While tree mortality rates vary greatly Amazon-wide, on average trees are as likely to die standing as they are broken or uprooted-modes of death with different ecological consequences. Species-level growth rate is the single most important predictor of tree death in Amazonia, with faster-growing species being at higher risk. Within species, however, the slowest-growing trees are at greatest risk while the effect of tree size varies across the basin. In the driest Amazonian region species-level bioclimatic distributional patterns also predict the risk of death, suggesting that these forests are experiencing climatic conditions beyond their adaptative limits. These results provide not only a holistic pan-Amazonian picture of tree death but large-scale evidence for the overarching importance of the growth-survival trade-off in driving tropical tree mortality.
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Affiliation(s)
- Adriane Esquivel-Muelbert
- School of Geography, Earth and Enviornmental Sciences, University of Birmingham, Birmingham, UK.
- School of Geography, University of Leeds, Leeds, UK.
- Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK.
| | | | | | - Sophie Fauset
- School of Geography, Earth and Environmental Sciences, University of Plymouth, Plymouth, UK
| | - Martin J P Sullivan
- School of Geography, University of Leeds, Leeds, UK
- Department of Natural Sciences, Manchester Metropolitan University, Manchester, UK
| | | | - Kuo-Jung Chao
- International Master Program of Agriculture, National Chung Hsing University, Taichung, Taiwan
| | - Ted R Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | | | - Niro Higuchi
- Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | | | - Jon Lloyd
- Faculty of Natural Sciences, Department of Life, Imperial College London Sciences, London, UK
| | - Haiyan Liu
- School of Mathematics, University of Leeds, Leeds, UK
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Beatriz Marimon
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - Ben Hur Marimon Junior
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | | | - Lourens Poorter
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
| | - Marcos Silveira
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | - Emilio Vilanova Torre
- Instituto de Investigaciones para el Desarrollo Forestal (INDEFOR), Universidad de Los Andes, Mérida, Venezuela
- University of California, Berkeley, CA, USA
| | - Esteban Alvarez Dávila
- Escuela de Ciencias Agropecuarias y Ambientales, Universidad Nacional Abierta y a Distancia, Boyacá, Colombia
- Fundación ConVida, Medellín, Colombia
| | | | - Everton Almeida
- Instituto de Biodiversidade e Florestas, Universidade Federal do Oeste do Pará, Santarém, Brazil
| | - Patricia Alvarez Loayza
- Center for Tropical Conservation, Nicholas School of the Environment, University in Durham, Durham, NC, USA
| | - Ana Andrade
- Projeto Dinâmica Biológica de Fragmentos, Instituto Nacional de Pesquisas da Amazônia Florestais, Manaus, AM, Brazil
| | - Luiz E O C Aragão
- National Institute for Space Research (INPE), São José dos Campos, SP, Brazil
| | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz de la Sierra, Bolivia
| | - Eric Arets
- Wageningen Environmental Research, Wageningen University and Research, Wageningen, Netherlands
| | - Luzmila Arroyo
- Dirección de la Carrera de Biología, Universidad Autónoma Gabriel René Moreno, Santa Cruz de la Sierra, Bolivia
| | - Gerardo A Aymard C
- UNELLEZ-Guanare, Herbario Universitario (PORT), Portuguesa, Venezuela Compensation International Progress S.A. Ciprogress-Greenlife, Bogotá, D.C., Colombia
| | - Michel Baisie
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - Christopher Baraloto
- Department of Biological Sciences, International Center for Tropical Botany, Florida International University, Miami, FL, USA
| | | | - Jorcely Barroso
- Universidade Federal do Acre, Campus Floresta, Cruzeiro do Sul, Brazil
| | - Lilian Blanc
- UR Forest & Societies, CIRAD, Montpellier, France
| | - Damien Bonal
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - Frans Bongers
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
| | - René Boot
- Department of Biology, Utrecht, Netherlands
| | | | - Benoit Burban
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - José Luís Camargo
- Projeto Dinâmica Biológica de Fragmentos, Instituto Nacional de Pesquisas da Amazônia Florestais, Manaus, AM, Brazil
| | - Wendeson Castro
- Laboratório de Botânica e Ecologia Vegetal, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | | | - Jerome Chave
- Laboratoire Evolution et Diversite Biologique, CNRS, Toulouse, France
| | - James Comiskey
- Inventory and Monitoring Program, National Park Service, Fort Collins, CO, USA
| | | | - Antonio Lola da Costa
- Instituto de Geociências, Faculdade de Meteorologia, Universidade Federal do Para, Belém, Brazil
| | | | - Anthony Di Fiore
- Department of Anthropology and Primate Molecular Ecology and Evolution Laboratory, University of Texas, Austin, TX, USA
| | - Aurélie Dourdain
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | - Terry Erwin
- National Museum of Natural History, Smithsonian Institute, Washington, DC, USA
| | | | | | - Rafael Herrera
- Instituto Venezolano de Investigaciones Científicas (IVIC), Caracas, Venezuela
- IIAMA, Universitat Politécnica de València, València, Spain
| | | | | | - Eliana Jimenez-Rojas
- Instituto Amazónico de Investigaciones Imani, Universidad Nacional de Colombia Sede Amazonia, Leticia, Colombia
| | | | - Susan Laurance
- College of Science and Engineering, James Cook University, Cairns, QLD, Australia
| | - William Laurance
- College of Science and Engineering, James Cook University, Cairns, QLD, Australia
| | | | - Simon L Lewis
- School of Geography, University of Leeds, Leeds, UK
- Department of Geography, University College London, London, UK
| | | | | | - Thomas Lovejoy
- Environmental Science and Policy, George Mason University, Fairfax, VA, USA
| | - Patrick Meir
- Research School of Biology, Australian National University, Canberra, ACT, Australia
- School of Geosciences, University of Edinburgh, Edinburgh, UK
| | - Casimiro Mendoza
- Escuela de Ciencias Forestales, Unidad Académica del Trópico, Universidad Mayor de San Simón, Cochabamba, Bolivia
| | - Paulo Morandi
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - David Neill
- Facultad de Ingeniería Ambiental, Universidad Estatal Amazónica, Puyo, Ecuador
| | | | | | - Edmar Almeida de Oliveira
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - Nadir Pallqui Camacho
- School of Geography, University of Leeds, Leeds, UK
- Universidad Nacional de San Antonio Abad del Cusco, Cusco, Perú
| | - Guido Pardo
- Universidad Autónoma del Beni José Ballivián, Trinidad, Bolivia
| | | | - Marielos Peña-Claros
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
| | | | | | - John Pipoly
- Broward County Parks Recreation, Oakland Park, FL, USA
| | - Nigel Pitman
- Keller Science Action Center, Field Museum, Chicago, IL, USA
| | - Adriana Prieto
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Thomas A M Pugh
- School of Geography, Earth and Enviornmental Sciences, University of Birmingham, Birmingham, UK
- Birmingham Institute of Forest Research, University of Birmingham, Birmingham, UK
| | - Carlos Quesada
- Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | - Hirma Ramirez-Angulo
- Institute of Research for Forestry Development (INDEFOR), Universidad de los Andes, Mérida, Venezuela
| | - Simone Matias de Almeida Reis
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
- UNEMAT - Universidade do Estado de Mato Grosso PPG-Ecologia e Conservação, Campus de Nova Xavantina, Nova Xavantina, MT, Brazil
| | - Maxime Rejou-Machain
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | | | - Lily Rodriguez Bayona
- Centro de Conservacion, Investigacion y Manejo de Areas Naturales, CIMA Cordillera Azul, Lima, Peru
| | - Agustín Rudas
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Rafael Salomão
- Museu Paraense Emílio Goeldi, Belém, Brazil
- Universidade Federal Rural da Amazônia, Belém, Brazil
| | - Julio Serrano
- Instituto de Investigaciones para el Desarrollo Forestal (INDEFOR), Universidad de Los Andes, Mérida, Venezuela
| | - Javier Silva Espejo
- Universidad Nacional de San Antonio Abad del Cusco, Cusco, Perú
- Departamento de Biología, Universidad de La Serena, La Serena, Chile
| | | | - James Singh
- Guyana Forestry Commission, Georgetown, Guyana
| | - Clement Stahl
- INRAE, UMR EcoFoG, CNRS, Cirad, AgroParisTech, Université des Antilles, Université de Guyane, Kourou, France
| | | | - Varun Swamy
- Institute for Conservation Research, Escondido, CA, USA
| | - Joey Talbot
- Institute for Transport Studies, University of Leeds, Leeds, UK
| | - Hans Ter Steege
- Biodiversity Dynamics, Naturalis Biodiversity Center, Leiden, The Netherlands
- Systems Ecology, Free University, De Boelelaan 1087, Amsterdam, Netherlands
| | - John Terborgh
- Department of Biology, University of Florida, Gainesville, FL, USA
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development, Georgetown, Guyana
| | - Marisol Toledo
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel Rene Moreno, Santa Cruz de la Sierra, Bolivia
| | | | | | | | - Peter van der Meer
- Van Hall Larenstein University of Applied Sciences, Leeuwarden, Netherlands
| | | | | | - Simone Aparecida Vieira
- Núcleo de Estudos e Pesquisas Ambientais - Universidade Estadual de Campinas, Campinas, Brazil
| | | | - Vincent Vos
- Universidad Autónoma del Beni José Ballivián, Trinidad, Bolivia
| | | | - Pieter Zuidema
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, Netherlands
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13
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Fichaux M, Vleminckx J, Courtois EA, Delabie J, Galli J, Tao S, Labrière N, Chave J, Baraloto C, Orivel J. Environmental determinants of leaf litter ant community composition along an elevational gradient. Biotropica 2020. [DOI: 10.1111/btp.12849] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- Mélanie Fichaux
- CNRS UMR Ecologie des Forêts de Guyane (EcoFoG) AgroParisTech CIRAD INRA Université de Guyane Université des Antilles Kourou cedex France
| | - Jason Vleminckx
- CNRS UMR Ecologie des Forêts de Guyane (EcoFoG) AgroParisTech CIRAD INRA Université de Guyane Université des Antilles Kourou cedex France
- Institute of Environment, Department of Biological Sciences Florida International University Miami FL USA
| | - Elodie A. Courtois
- Laboratoire Ecologie, Evolution, Interactions des Systèmes Amazoniens (LEEISA) CNRS IFREMER Université de Guyane Cayenne France
- Department of Biology Centre of Excellence PLECO (Plant and Vegetation Ecology) University of Antwerp Wilrijk Belgium
| | - Jacques Delabie
- Laboratório de Mirmecologia CEPEC CEPLAC Itabuna Brazil
- Departamento de Ciências Agrárias e Ambientais Universidade Estadual de Santa Cruz Ilheus Brazil
| | - Jordan Galli
- CNRS UMR Ecologie des Forêts de Guyane (EcoFoG) AgroParisTech CIRAD INRA Université de Guyane Université des Antilles Kourou cedex France
- Naturalia Environnement Site Agroparc Avignon Cedex 9 France
| | - Shengli Tao
- Laboratoire Evolution et Diversité Biologique UMR 5174 CNRS IRD Université Paul Sabatier Toulouse France
| | - Nicolas Labrière
- Laboratoire Evolution et Diversité Biologique UMR 5174 CNRS IRD Université Paul Sabatier Toulouse France
| | - Jérôme Chave
- Laboratoire Evolution et Diversité Biologique UMR 5174 CNRS IRD Université Paul Sabatier Toulouse France
| | - Christopher Baraloto
- CNRS UMR Ecologie des Forêts de Guyane (EcoFoG) AgroParisTech CIRAD INRA Université de Guyane Université des Antilles Kourou cedex France
- Institute of Environment, Department of Biological Sciences Florida International University Miami FL USA
| | - Jérôme Orivel
- CNRS UMR Ecologie des Forêts de Guyane (EcoFoG) AgroParisTech CIRAD INRA Université de Guyane Université des Antilles Kourou cedex France
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14
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Valverde-Barrantes OJ, Maherali H, Baraloto C, Blackwood CB. Independent evolutionary changes in fine-root traits among main clades during the diversification of seed plants. New Phytol 2020; 228:541-553. [PMID: 32535912 DOI: 10.1111/nph.16729] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 05/19/2020] [Indexed: 06/11/2023]
Abstract
Changes in fine-root morphology are typically associated with transitions from the ancestral arbuscular mycorrhizal (AM) to the alternative ectomycorrhizal (ECM) or nonmycorrhizal (NM) associations. However, the modifications in root morphology may also coincide with new modifications in leaf hydraulics and growth habit during angiosperm diversification. These hypotheses have not been evaluated concurrently, and this limits our understanding of the causes of fine-root evolution. To explore the evolution of fine-root systems, we assembled a 600+ species database to reconstruct historical changes in seed plants over time. We utilise ancestral reconstruction approaches together with phylogenetically informed comparative analyses to test whether changes in fine-root traits were most strongly associated with mycorrhizal affiliation, leaf hydraulics or growth form. Our findings showed significant shifts in root diameter, specific root length and root tissue density as angiosperms diversified, largely independent from leaf changes or mycorrhizal affiliation. Growth form was the only factor associated with fine-root traits in statistical models including mycorrhizal association and leaf venation, suggesting substantial modifications in fine-root morphology during transitions from woody to nonwoody habits. Divergences in fine-root systems were crucial in the evolution of seed plant lineages, with important implications for ecological processes in terrestrial ecosystems.
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Affiliation(s)
- Oscar J Valverde-Barrantes
- International Center for Tropical Biodiversity, Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
| | - Hafiz Maherali
- Department of Integrative Biology, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada
| | - Christopher Baraloto
- International Center for Tropical Biodiversity, Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
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15
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Draper FC, Baker TR, Baraloto C, Chave J, Costa F, Martin RE, Pennington RT, Vicentini A, Asner GP. Quantifying Tropical Plant Diversity Requires an Integrated Technological Approach. Trends Ecol Evol 2020; 35:1100-1109. [PMID: 32912632 DOI: 10.1016/j.tree.2020.08.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Revised: 08/04/2020] [Accepted: 08/12/2020] [Indexed: 10/23/2022]
Abstract
Tropical biomes are the most diverse plant communities on Earth, and quantifying this diversity at large spatial scales is vital for many purposes. As macroecological approaches proliferate, the taxonomic uncertainties in species occurrence data are easily neglected and can lead to spurious findings in downstream analyses. Here, we argue that technological approaches offer potential solutions, but there is no single silver bullet to resolve uncertainty in plant biodiversity quantification. Instead, we propose the use of artificial intelligence (AI) approaches to build a data-driven framework that integrates several data sources - including spectroscopy, DNA sequences, image recognition, and morphological data. Such a framework would provide a foundation for improving species identification in macroecological analyses while simultaneously improving the taxonomic process of species delimitation.
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Affiliation(s)
- Frederick C Draper
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, AZ, USA; School of Geography, University of Leeds, Leeds, UK.
| | | | - Christopher Baraloto
- Institute of Environment, Department of Biological Sciences, Florida International University, Miami, FL, USA
| | - Jerome Chave
- Laboratoire Evolution et Diversité Biologique (EDB) CNRS/UPS, Toulouse, France
| | - Flavia Costa
- Instituto Nacional de Pesquisas da Amazônia - INPA, Manaus, Brazil
| | - Roberta E Martin
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, AZ, USA
| | - R Toby Pennington
- Department of Geography, University of Exeter, Exeter, UK; Royal Botanic Garden, Edinburgh, UK
| | | | - Gregory P Asner
- Center for Global Discovery and Conservation Science, Arizona State University, Tempe, AZ, USA
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16
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Legeay J, Husson C, Boudier B, Louisanna E, Baraloto C, Schimann H, Marcais B, Buée M. Surprising low diversity of the plant pathogen Phytophthora in Amazonian forests. Environ Microbiol 2020; 22:5019-5032. [PMID: 32452108 DOI: 10.1111/1462-2920.15099] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Accepted: 05/23/2020] [Indexed: 11/30/2022]
Abstract
The genus Phytophthora represents a group of plant pathogens with broad global distribution. The majority of them cause the collar and root-rot of diverse plant species. Little is known about Phytophthora communities in forest ecosystems, especially in the Neotropical forests where natural enemies could maintain the huge plant diversity via negative density dependence. We characterized the diversity of soil-borne Phytophthora communities in the North French Guiana rainforest and investigated how they are structured by host identity and environmental factors. In this little-explored habitat, 250 soil cores were sampled from 10 plots hosting 10 different plant families across three forest environments (Terra Firme, Seasonally Flooded and White Sand). Phytophthora diversity was studied using a baiting approach and metabarcoding (High-Throughput Sequencing) on environmental DNA extracted from both soil samples and baiting-leaves. These three approaches revealed very similar communities, characterized by an unexpected low diversity of Phytophthora species, with the dominance of two cryptic species close to Phytophthora heveae. As expected, the Phytophthora community composition of the French Guiana rainforest was significantly impacted by the host plant family and environment. However, these plant pathogen communities are very small and are dominated by generalist species, questioning their potential roles as drivers of plant diversity in these Amazonian forests.
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Affiliation(s)
- Jean Legeay
- Université de Lorraine, INRAE, UMR IAM - Interactions Arbres-Microorganismes, Nancy, F-54000, France
| | - Claude Husson
- Université de Lorraine, INRAE, UMR IAM - Interactions Arbres-Microorganismes, Nancy, F-54000, France.,Département de la santé des forêts, Ministère de l'agriculture et de l'alimentation, DGAL, SDQPV, Paris, 75015, France
| | - Benjamin Boudier
- Université de Lorraine, INRAE, UMR IAM - Interactions Arbres-Microorganismes, Nancy, F-54000, France
| | - Eliane Louisanna
- INRAE, UMR EcoFoG - Ecology of Guiana Forests - (AgroParisTech, CNRS, CIRAD, Université des Antilles, Université de Guyane), Kourou, 97310, France
| | - Christopher Baraloto
- INRAE, UMR EcoFoG - Ecology of Guiana Forests - (AgroParisTech, CNRS, CIRAD, Université des Antilles, Université de Guyane), Kourou, 97310, France.,International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
| | - Heidy Schimann
- INRAE, UMR EcoFoG - Ecology of Guiana Forests - (AgroParisTech, CNRS, CIRAD, Université des Antilles, Université de Guyane), Kourou, 97310, France
| | - Benoît Marcais
- Université de Lorraine, INRAE, UMR IAM - Interactions Arbres-Microorganismes, Nancy, F-54000, France
| | - Marc Buée
- Université de Lorraine, INRAE, UMR IAM - Interactions Arbres-Microorganismes, Nancy, F-54000, France
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Sullivan MJP, Lewis SL, Affum-Baffoe K, Castilho C, Costa F, Sanchez AC, Ewango CEN, Hubau W, Marimon B, Monteagudo-Mendoza A, Qie L, Sonké B, Martinez RV, Baker TR, Brienen RJW, Feldpausch TR, Galbraith D, Gloor M, Malhi Y, Aiba SI, Alexiades MN, Almeida EC, de Oliveira EA, Dávila EÁ, Loayza PA, Andrade A, Vieira SA, Aragão LEOC, Araujo-Murakami A, Arets EJMM, Arroyo L, Ashton P, Aymard C. G, Baccaro FB, Banin LF, Baraloto C, Camargo PB, Barlow J, Barroso J, Bastin JF, Batterman SA, Beeckman H, Begne SK, Bennett AC, Berenguer E, Berry N, Blanc L, Boeckx P, Bogaert J, Bonal D, Bongers F, Bradford M, Brearley FQ, Brncic T, Brown F, Burban B, Camargo JL, Castro W, Céron C, Ribeiro SC, Moscoso VC, Chave J, Chezeaux E, Clark CJ, de Souza FC, Collins M, Comiskey JA, Valverde FC, Medina MC, da Costa L, Dančák M, Dargie GC, Davies S, Cardozo ND, de Haulleville T, de Medeiros MB, del Aguila Pasquel J, Derroire G, Di Fiore A, Doucet JL, Dourdain A, Droissart V, Duque LF, Ekoungoulou R, Elias F, Erwin T, Esquivel-Muelbert A, Fauset S, Ferreira J, Llampazo GF, Foli E, Ford A, Gilpin M, Hall JS, Hamer KC, Hamilton AC, Harris DJ, Hart TB, Hédl R, Herault B, Herrera R, Higuchi N, Hladik A, Coronado EH, Huamantupa-Chuquimaco I, Huasco WH, Jeffery KJ, Jimenez-Rojas E, Kalamandeen M, Djuikouo MNK, Kearsley E, Umetsu RK, Kho LK, Killeen T, Kitayama K, Klitgaard B, Koch A, Labrière N, Laurance W, Laurance S, Leal ME, Levesley A, Lima AJN, Lisingo J, Lopes AP, Lopez-Gonzalez G, Lovejoy T, Lovett JC, Lowe R, Magnusson WE, Malumbres-Olarte J, Manzatto ÂG, Marimon BH, Marshall AR, Marthews T, de Almeida Reis SM, Maycock C, Melgaço K, Mendoza C, Metali F, Mihindou V, Milliken W, Mitchard ETA, Morandi PS, Mossman HL, Nagy L, Nascimento H, Neill D, Nilus R, Vargas PN, Palacios W, Camacho NP, Peacock J, Pendry C, Peñuela Mora MC, Pickavance GC, Pipoly J, Pitman N, Playfair M, Poorter L, Poulsen JR, Poulsen AD, Preziosi R, Prieto A, Primack RB, Ramírez-Angulo H, Reitsma J, Réjou-Méchain M, Correa ZR, de Sousa TR, Bayona LR, Roopsind A, Rudas A, Rutishauser E, Abu Salim K, Salomão RP, Schietti J, Sheil D, Silva RC, Espejo JS, Valeria CS, Silveira M, Simo-Droissart M, Simon MF, Singh J, Soto Shareva YC, Stahl C, Stropp J, Sukri R, Sunderland T, Svátek M, Swaine MD, Swamy V, Taedoumg H, Talbot J, Taplin J, Taylor D, ter Steege H, Terborgh J, Thomas R, Thomas SC, Torres-Lezama A, Umunay P, Gamarra LV, van der Heijden G, van der Hout P, van der Meer P, van Nieuwstadt M, Verbeeck H, Vernimmen R, Vicentini A, Vieira ICG, Torre EV, Vleminckx J, Vos V, Wang O, White LJT, Willcock S, Woods JT, Wortel V, Young K, Zagt R, Zemagho L, Zuidema PA, Zwerts JA, Phillips OL. Long-term thermal sensitivity of Earth’s tropical forests. Science 2020; 368:869-874. [DOI: 10.1126/science.aaw7578] [Citation(s) in RCA: 121] [Impact Index Per Article: 30.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 03/05/2020] [Indexed: 01/21/2023]
Affiliation(s)
- Martin J. P. Sullivan
- School of Geography, University of Leeds, Leeds, UK
- Department of Natural Sciences, Manchester Metropolitan University, Manchester, UK
| | - Simon L. Lewis
- School of Geography, University of Leeds, Leeds, UK
- Department of Geography, University College London, London, UK
| | | | - Carolina Castilho
- Embrapa Roraima, Brazilian Agricultural Research Corporation (EMBRAPA), Brasília, Brazil
| | - Flávia Costa
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | - Aida Cuni Sanchez
- Department of Ecosystem Science and Sustainability, Colorado State University, Fort Collins, CO, USA
- Department of Environment and Geography, University of York, York, UK
| | - Corneille E. N. Ewango
- DR Congo Programme, Wildlife Conservation Society, Kisangani, Democratic Republic of Congo
- Centre de Formation et de Recherche en Conservation Forestiere (CEFRECOF), Epulu, Democratic Republic of Congo
- Faculté de Gestion de Ressources Naturelles Renouvelables, Université de Kisangani, Kisangani, Democratic Republic of Congo
| | - Wannes Hubau
- School of Geography, University of Leeds, Leeds, UK
- Service of Wood Biology, Royal Museum for Central Africa, Tervuren, Belgium
- Department of Environment, Laboratory of Wood Technology (Woodlab), Ghent University, Ghent, Belgium
| | - Beatriz Marimon
- UNEMAT - Universidade do Estado de Mato Grosso, Nova Xavantina-MT, Brazil
| | | | - Lan Qie
- School of Life Sciences, University of Lincoln, Lincoln, UK
| | - Bonaventure Sonké
- Plant Systematics and Ecology Laboratory, Higher Teachers’ Training College, University of Yaoundé I, Yaoundé, Cameroon
| | | | | | | | - Ted R. Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | | | - Manuel Gloor
- School of Geography, University of Leeds, Leeds, UK
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Shin-Ichiro Aiba
- Faculty of Environmental Earth Science, Hokkaido University, Sapporo, Japan
| | | | - Everton C. Almeida
- Instituto de Biodiversidade e Florestas, Universidade Federal do Oeste do Pará, Santarém - PA, Brazil
| | | | - Esteban Álvarez Dávila
- Escuela de Ciencias Agrícolas, Pecuarias y del Medio Ambiente, National Open University and Distance, Bogotá, Colombia
| | | | - Ana Andrade
- Projeto Dinâmica Biológica de Fragmentos Florestais, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | | | - Luiz E. O. C. Aragão
- Geography, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
- National Institute for Space Research (INPE), São José dos Campos, SP, Brazil
| | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autónoma Gabriel René Moreno, Santa Cruz, Bolivia
| | | | - Luzmila Arroyo
- Dirección de la Carrera de Biología, Universidad Autónoma Gabriel René Moreno, Santa Cruz, Bolivia
| | - Peter Ashton
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA
| | - Gerardo Aymard C.
- Programa de Ciencias del Agro y el Mar, Herbario Universitario, Guanare, Venezuela
| | | | | | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL, USA
| | - Plínio Barbosa Camargo
- Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, São Paulo, SP, Brazil
| | - Jos Barlow
- Lancaster Environment Centre, Lancaster University, Lancaster, UK
| | - Jorcely Barroso
- Centro Multidisciplinar, Universidade Federal do Acre, Cruzeiro do Sul, AC, Brazil
| | - Jean-François Bastin
- Institure of Integrative Biology, ETH Zurich, Zurich, Switzerland
- Department of Environment, Computational and Applied Vegetation Ecology (CAVELab), Ghent University, Ghent, Belgium
| | - Sarah A. Batterman
- School of Geography, University of Leeds, Leeds, UK
- Priestley International Centre for Climate, University of Leeds, Leeds, UK
- Smithsonian Tropical Research Institute, Panama, Panama
- Cary Institute of Ecosystem Studies, Millbrook, NY, USA
| | - Hans Beeckman
- Service of Wood Biology, Royal Museum for Central Africa, Tervuren, Belgium
| | - Serge K. Begne
- School of Geography, University of Leeds, Leeds, UK
- Plant Systematics and Ecology Laboratory, Higher Teachers’ Training College, University of Yaoundé I, Yaoundé, Cameroon
| | | | - Erika Berenguer
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
- Lancaster Environment Centre, Lancaster University, Lancaster, UK
| | | | - Lilian Blanc
- UR Forest and Societies, CIRAD, Montpellier, France
| | - Pascal Boeckx
- Isotope Bioscience Laboratory (ISOFYS), Ghent University, Ghent, Belgium
| | - Jan Bogaert
- Gembloux Agro-Bio Tech, University of Liège, Liège, Belgium
| | | | - Frans Bongers
- Forest Ecology and Forest Management Group, Wageningen University, Wageningen, Netherlands
| | | | - Francis Q. Brearley
- Department of Natural Sciences, Manchester Metropolitan University, Manchester, UK
| | - Terry Brncic
- Congo Programme, Wildlife Conservation Society, Brazzavile, Republic of Congo
| | | | - Benoit Burban
- INRAE, UMR EcoFoG, CNRS, CIRAD, AgroParisTech, Université des Antilles, Université de Guyane, 97310 Kourou, French Guiana
| | - José Luís Camargo
- Projeto Dinâmica Biológica de Fragmentos Florestais, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | - Wendeson Castro
- Programa de Pós-Graduação Ecologia e Manejo de Recursos Naturais, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | - Carlos Céron
- Herbario Alfredo Paredes, Universidad Central del Ecuador, Quito, Ecuador
| | - Sabina Cerruto Ribeiro
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | | | - Jerôme Chave
- Laboratoire Évolution et Diversité Biologique, UMR 5174 (CNRS/IRD/UPS), CNRS, Toulouse, France
| | | | - Connie J. Clark
- Nicholas School of the Environment, Duke University, Durham, NC, USA
| | | | - Murray Collins
- Grantham Research Institute on Climate Change and the Environment, London, UK
- School of Geosciences, University of Edinburgh, Edinburgh, UK
| | - James A. Comiskey
- Inventory and Monitoring Program, National Park Service, Fredericksburg, VA, USA
- Smithsonian Institution, Washington, DC, USA
| | | | | | - Lola da Costa
- Instituto de Geociências, Faculdade de Meteorologia, Universidade Federal do Para, Belém, PA, Brazil
| | - Martin Dančák
- Faculty of Science, Department of Ecology and Environmental Sciences, Palacký University Olomouc, Olomouc, Czech Republic
| | | | - Stuart Davies
- Center for Tropical Forest Science, Smithsonian Tropical Research Institute, Panama, Panama
| | | | - Thales de Haulleville
- Service of Wood Biology, Royal Museum for Central Africa, Tervuren, Belgium
- Gembloux Agro-Bio Tech, University of Liège, Liège, Belgium
| | - Marcelo Brilhante de Medeiros
- Embrapa Genetic Resources and Biotechnology, Brazilian Agricultural Research Corporation (EMBRAPA), Brasília, Brazil
| | | | - Géraldine Derroire
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, INRAE, Université des Antilles, Université de Guyane), Kourou, French Guiana
| | - Anthony Di Fiore
- Department of Anthropology, The University of Texas at Austin, Austin, TX, USA
| | - Jean-Louis Doucet
- Forest Resources Management, Gembloux Agro-Bio Tech, University of Liège, Liège, Belgium
| | - Aurélie Dourdain
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, INRAE, Université des Antilles, Université de Guyane), Kourou, French Guiana
| | - Vincent Droissart
- AMAP, Universite de Montpellier, IRD, CNRS, CIRAD, INRAE, Montpellier, France
| | | | | | - Fernando Elias
- Institute of Biological Sciences, Universidade Federal do Pará, Belém, PA, Brazil
| | - Terry Erwin
- National Museum of Natural History, Smithsonian Institution, Washington, DC, USA
| | | | - Sophie Fauset
- School of Geography, Earth and Environmental Sciences, University of Plymouth, Plymouth, UK
| | - Joice Ferreira
- Embrapa Amazônia Oriental, Brazilian Agricultural Research Corporation (EMBRAPA), Brasília, Brazil
| | | | - Ernest Foli
- Forestry Research Institute of Ghana (FORIG), Kumasi, Ghana
| | | | | | - Jefferson S. Hall
- Smithsonian Institution Forest Global Earth Observatory (ForestGEO), Smithsonian Tropical Research Institute, Washington, DC, USA
| | | | | | | | - Terese B. Hart
- Lukuru Wildlife Research Foundation, Kinshasa, Democratic Republic of Congo
- Division of Vertebrate Zoology, Yale Peabody Museum of Natural History, New Haven, CT, USA
| | - Radim Hédl
- Institute of Botany, Czech Academy of Sciences, Brno, Czech Republic
- Department of Botany, Palacký University in Olomouc, Olomouc, Czech Republic
| | - Bruno Herault
- Isotope Bioscience Laboratory (ISOFYS), Ghent University, Ghent, Belgium
- CIRAD, UPR Forêts et Sociétés, Yamoussoukro, Côte d’Ivoire
- Institut National Polytechnique Félix Houphouët-Boigny, INP-HB, Yamoussoukro, Côte d’Ivoire
| | - Rafael Herrera
- Instituto Venezolano de Investigaciones Científicas (IVIC), Caracas, Venezuela
| | - Niro Higuchi
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | - Annette Hladik
- Département Hommes, Natures, Sociétés, Muséum National d'Histoire Naturel, Paris, France
| | | | | | | | - Kathryn J. Jeffery
- Biological and Environmental Sciences, University of Stirling, Stirling, UK
| | | | - Michelle Kalamandeen
- School of Geography, University of Leeds, Leeds, UK
- Living with Lakes Centre, Laurentian University, Sudbury, Canada
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Marie Noël Kamdem Djuikouo
- Faculté de Gestion de Ressources Naturelles Renouvelables, Université de Kisangani, Kisangani, Democratic Republic of Congo
- Department of Environment, Laboratory of Wood Technology (Woodlab), Ghent University, Ghent, Belgium
- Plant Systematics and Ecology Laboratory, Higher Teachers’ Training College, University of Yaoundé I, Yaoundé, Cameroon
- Faculty of Science, Department of Botany and Plant Physiology, University of Buea, Buea, Cameroon
| | - Elizabeth Kearsley
- Department of Environment, Computational and Applied Vegetation Ecology (CAVELab), Ghent University, Ghent, Belgium
| | | | - Lip Khoon Kho
- Tropical Peat Research Institute, Malaysian Palm Oil Board, Selangor, Malaysia
| | | | | | | | - Alexander Koch
- Department of Earth Sciences, University of Hong Kong, Pok Ful Lam, Hong Kong Special Administrative Region, China
| | - Nicolas Labrière
- Laboratoire Évolution et Diversité Biologique, UMR 5174 (CNRS/IRD/UPS), CNRS, Toulouse, France
| | - William Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental Sciences, James Cook University, Douglas, QLD, Australia
| | - Susan Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental Sciences, James Cook University, Douglas, QLD, Australia
| | - Miguel E. Leal
- Uganda Programme, Wildlife Conservation Society, Kampala, Uganda
| | | | | | - Janvier Lisingo
- Faculté de Gestion de Ressources Naturelles Renouvelables, Université de Kisangani, Kisangani, Democratic Republic of Congo
| | - Aline P. Lopes
- National Institute for Space Research (INPE), São José dos Campos, SP, Brazil
| | | | - Tom Lovejoy
- Environmental Science and Policy, George Mason University, Fairfax, VA, USA
| | - Jon C. Lovett
- School of Geography, University of Leeds, Leeds, UK
- Royal Botanic Gardens Kew, Richmond, London, UK
| | - Richard Lowe
- Botany Department, University of Ibadan, Ibadan, Nigeria
| | - William E. Magnusson
- Coordenação da Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA), Mauaus, Brazil
| | - Jagoba Malumbres-Olarte
- cE3c – Centre for Ecology, Evolution and Environmental Changes / Azorean Biodiversity Group, Universidade dos Açores, Angra do Heroísmo, Azores, Portugal
- LIBRe – Laboratory for Integrative Biodiversity Research, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Ângelo Gilberto Manzatto
- Laboratório de Biogeoquímica Ambiental Wolfgang C. Pfeiffer, Universidade Federal de Rondônia, Porto Velho - RO, Brazil
| | - Ben Hur Marimon
- Faculdade de Ciências Agrárias, Biológicas e Sociais Aplicadas, Universidad do Estado de Mato Grosso, Nova Xavantina-MT, Brazil
| | - Andrew R. Marshall
- Department of Environment and Geography, University of York, York, UK
- Tropical Forests and People Research Centre, University of the Sunshine Coast, Sippy Downs, QLD, Australia
- Flamingo Land Ltd., North Yorkshire, UK
| | - Toby Marthews
- UK Centre for Ecology and Hydrology, Wallingford, UK
| | - Simone Matias de Almeida Reis
- UNEMAT - Universidade do Estado de Mato Grosso, Nova Xavantina-MT, Brazil
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Colin Maycock
- School of International Tropical Forestry, Universiti Malaysia Sabah, Kota Kinabalu, Malaysia
| | | | - Casimiro Mendoza
- Escuela de Ciencias Forestales, Unidad Académica del Trópico, Universidad Mayor de San Simón, Sacta, Bolivia
| | - Faizah Metali
- Faculty of Science, Universiti Brunei Darussalam, Brunei
| | - Vianet Mihindou
- Agence Nationale des Parcs Nationaux, Libreville, Gabon
- Ministère de la Forêt, de la Mer, de l'Environnement, Chargé du Plan Climat, Libreville, Gabon
| | | | | | - Paulo S. Morandi
- UNEMAT - Universidade do Estado de Mato Grosso, Nova Xavantina-MT, Brazil
| | - Hannah L. Mossman
- Department of Natural Sciences, Manchester Metropolitan University, Manchester, UK
| | - Laszlo Nagy
- Institute of Biology, University of Campinas, Campinas, SP, Brazil
| | | | - David Neill
- Facultad de Ingeniería Ambiental, Universidad Estatal Amazónica, Puyo, Pastaza, Ecuador
| | - Reuben Nilus
- Forest Research Centre, Sabah Forestry Department, Sepilok, Malaysia
| | - Percy Núñez Vargas
- Instituto Venezolano de Investigaciones Científicas (IVIC), Caracas, Venezuela
| | - Walter Palacios
- Carrera de Ingeniería Forestal, Universidad Tecnica del Norte, Ibarra, Ecuador
| | - Nadir Pallqui Camacho
- School of Geography, University of Leeds, Leeds, UK
- Instituto Venezolano de Investigaciones Científicas (IVIC), Caracas, Venezuela
| | | | | | | | | | - John Pipoly
- Public Communications and Outreach Group, Parks and Recreation Division, Oakland Park, FL, USA
| | - Nigel Pitman
- Keller Science Action Center, Field Museum, Chicago, IL, USA
| | - Maureen Playfair
- Centre for Agricultural Research in Suriname (CELOS), Paramaribo, Suriname
| | - Lourens Poorter
- Forest Ecology and Forest Management Group, Wageningen University, Wageningen, Netherlands
| | - John R. Poulsen
- Nicholas School of the Environment, Duke University, Durham, NC, USA
| | | | - Richard Preziosi
- Department of Natural Sciences, Manchester Metropolitan University, Manchester, UK
| | - Adriana Prieto
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Leticia, Colombia
| | | | - Hirma Ramírez-Angulo
- Institute of Research for Forestry Development (INDEFOR), Universidad de los Andes, Mérida, Venezuela
| | | | | | | | | | - Lily Rodriguez Bayona
- Centro de Conservacion, Investigacion y Manejo de Areas Naturales, CIMA Cordillera Azul, Lima, Peru
| | - Anand Roopsind
- Iwokrama International Centre for Rainforest Conservation and Development, Georgetown, Guyana
| | - Agustín Rudas
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Leticia, Colombia
| | - Ervan Rutishauser
- Smithsonian Tropical Research Institute, Panama, Panama
- Carboforexpert, Geneva, Switzerland
| | | | - Rafael P. Salomão
- Universidade Federal Rural da Amazônia/CAPES, Belém, PA, Brazil
- Museu Paraense Emílio Goeldi, Belém, PA, Brazil
| | - Juliana Schietti
- Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, Brazil
| | - Douglas Sheil
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway
| | - Richarlly C. Silva
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, AC, Brazil
- Instituto Federal do Acre, Rio Branco, AC, Brazil
| | | | | | - Marcos Silveira
- Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, AC, Brazil
| | - Murielle Simo-Droissart
- Plant Systematics and Ecology Laboratory, Higher Teachers’ Training College, University of Yaoundé I, Yaoundé, Cameroon
| | - Marcelo Fragomeni Simon
- Embrapa Genetic Resources and Biotechnology, Brazilian Agricultural Research Corporation (EMBRAPA), Brasília, Brazil
| | - James Singh
- Guyana Forestry Commission, Georgetown, Guyana
| | | | - Clement Stahl
- INRAE, UMR EcoFoG, CNRS, CIRAD, AgroParisTech, Université des Antilles, Université de Guyane, 97310 Kourou, French Guiana
| | - Juliana Stropp
- Departamento de Biogeografía y Cambio Global, Museo Nacional de Ciencias Naturales, Consejo Superior de Investigaciones Científicas (MNCN-CSIC), Madrid, Spain
| | - Rahayu Sukri
- Faculty of Science, Universiti Brunei Darussalam, Brunei
| | - Terry Sunderland
- Sustainable Landscapes and Food Systems, Center for International Forestry Research, Bogor, Indonesia
- Faculty of Forestry, University of British Columbia, Vancouver, Canada
| | - Martin Svátek
- Department of Forest Botany, Dendrology and Geobiocoenology, Mendel University in Brno, Brno, Czech Republic
| | - Michael D. Swaine
- Department of Plant and Soil Science, School of Biological Sciences, University of Aberdeen, Aberdeen, UK
| | - Varun Swamy
- Institute for Conservation Research, San Diego Zoo, San Diego, CA. USA
| | - Hermann Taedoumg
- Department of Plant Biology, Faculty of Sciences, University of Yaounde 1, Yaoundé, Cameroon
- Bioversity International, Yaoundé, Cameroon
| | - Joey Talbot
- School of Geography, University of Leeds, Leeds, UK
| | - James Taplin
- UK Research and Innovation, Innovate UK, London, UK
| | - David Taylor
- Department of Geography, National University of Singapore, Singapore
| | - Hans ter Steege
- Naturalis Biodiversity Center, Leiden, Netherlands
- Systems Ecology, Vrije Universiteit Amsterdam, Amsterdam, Netherlands
| | - John Terborgh
- Nicholas School of the Environment, Duke University, Durham, NC, USA
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development, Georgetown, Guyana
| | - Sean C. Thomas
- Faculty of Forestry, University of Toronto, Toronto, Canada
| | | | - Peter Umunay
- Wildlife Conservation Society, New York, NY, USA
- Yale School of Forestry and Environmental Studies, Yale University, New Haven, CT, USA
| | | | | | | | | | | | - Hans Verbeeck
- Department of Environment, Computational and Applied Vegetation Ecology (CAVELab), Ghent University, Ghent, Belgium
| | | | | | | | - Emilio Vilanova Torre
- School of Environmental and Forest Sciences, University of Washington, Seattle, OR, USA
| | - Jason Vleminckx
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL, USA
| | - Vincent Vos
- Centro de Investigación y Promoción del Campesinado, La Paz, Bolivia
- Universidad Autónoma del Beni José Ballivián, Riberalta, Bolivia
| | - Ophelia Wang
- School of Earth Sciences and Environmental Sustainability, Northern Arizona University, Flagstaff, AZ, USA
| | - Lee J. T. White
- Biological and Environmental Sciences, University of Stirling, Stirling, UK
- Agence Nationale des Parcs Nationaux, Libreville, Gabon
- Institut de Recherche en Ecologie Tropicale, Libreville, Gabon
| | - Simon Willcock
- School of Natural Sciences, University of Bangor, Bangor, UK
| | | | - Verginia Wortel
- Forest Management, Centre for Agricultural Research in Suriname (CELOS), Paramaribo, Suriname
| | - Kenneth Young
- Department of Geography and The Environment, University of Texas at Austin, Austin, TX, USA
| | | | - Lise Zemagho
- Plant Systematics and Ecology Laboratory, Higher Teachers’ Training College, University of Yaoundé I, Yaoundé, Cameroon
| | - Pieter A. Zuidema
- Forest Ecology and Forest Management Group, Wageningen University, Wageningen, Netherlands
| | - Joeri A. Zwerts
- Centre for Agricultural Research in Suriname (CELOS), Paramaribo, Suriname
- Utrecht University, Utrecht, Netherlands
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Fortunel C, Stahl C, Heuret P, Nicolini E, Baraloto C. Disentangling the effects of environment and ontogeny on tree functional dimensions for congeneric species in tropical forests. New Phytol 2020; 226:385-395. [PMID: 31872884 DOI: 10.1111/nph.16393] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2019] [Accepted: 12/06/2019] [Indexed: 06/10/2023]
Abstract
Soil water and nutrient availability are key drivers of tree species distribution and forest ecosystem functioning, with strong species differences in water and nutrient use. Despite growing evidence for intraspecific trait differences, it remains unclear under which circumstances the effects of environmental gradients trump those of ontogeny and taxonomy on important functional dimensions related to resource use, particularly in tropical forests. Here, we explore how physiological, chemical, and morphological traits related to resource use vary between life stages in four species within the genus Micropholis that is widespread in lowland Amazonia. Specifically, we evaluate how environment, developmental stage, and taxonomy contribute to single-trait variation and multidimensional functional strategies. We find that environment, developmental stage, and taxonomy differentially contribute to functional dimensions. Habitats and seasons shape physiological and chemical traits related to water and nutrient use, whereas developmental stage and taxonomic identity impact morphological traits -especially those related to the leaf economics spectrum. Our findings suggest that combining environment, ontogeny, and taxonomy allows for a better understanding of important functional dimensions in tropical trees and highlights the need for integrating tree physiological and chemical traits with classically used morphological traits to improve predictions of tropical forests' responses to environmental change.
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Affiliation(s)
- Claire Fortunel
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRA, IRD, Montpellier, France
| | - Clément Stahl
- UMR EcoFoG (Ecology of Guiana Forests), INRA, AgroParisTech, CIRAD, CNRS, Université de Guyane, Université des Antilles, 97379, Kourou, France
| | - Patrick Heuret
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRA, IRD, Montpellier, France
| | - Eric Nicolini
- AMAP (Botanique et Modélisation de l'Architecture des Plantes et des Végétations), Université de Montpellier, CIRAD, CNRS, INRA, IRD, Montpellier, France
| | - Christopher Baraloto
- UMR EcoFoG (Ecology of Guiana Forests), INRA, AgroParisTech, CIRAD, CNRS, Université de Guyane, Université des Antilles, 97379, Kourou, France
- Department of Biological Sciences, Florida International University, Miami, FL, 33133, USA
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19
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Schimann H, Vleminckx J, Baraloto C, Engel J, Jaouen G, Louisanna E, Manzi S, Sagne A, Roy M. Tree communities and soil properties influence fungal community assembly in neotropical forests. Biotropica 2020. [DOI: 10.1111/btp.12747] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Heidy Schimann
- INRA EcoFoG (AgroParisTech, CNRS, CIRAD, INRA, Université des Antilles, Université de Guyane) Kourou France
| | - Jason Vleminckx
- Department of Biological Science Florida International University Miami FL USA
| | | | - Julien Engel
- AMAP (Université de Montpellier, CIRAD, CNRS, INRA, IRD) Montpellier France
| | - Gaelle Jaouen
- AgroParisTech EcoFoG (AgroParisTech, CNRS, CIRAD, INRA, Université des Antilles, Université de Guyane) Kourou France
| | - Eliane Louisanna
- INRA EcoFoG (AgroParisTech, CNRS, CIRAD, INRA, Université des Antilles, Université de Guyane) Kourou France
| | - Sophie Manzi
- Laboratoire Évolution et Diversité Biologique CNRS, UMR 5174 UPS CNRS ENFA IRD Université Toulouse 3 Paul Sabatier Toulouse France
| | - Audrey Sagne
- INRA EcoFoG (AgroParisTech, CNRS, CIRAD, INRA, Université des Antilles, Université de Guyane) Kourou France
| | - Mélanie Roy
- Laboratoire Évolution et Diversité Biologique CNRS, UMR 5174 UPS CNRS ENFA IRD Université Toulouse 3 Paul Sabatier Toulouse France
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20
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Affiliation(s)
- Suresh C. Subedi
- Department of Earth and Environment Florida International University Miami Florida USA
- Wetland and Aquatic Center USGS Gainesville Florida USA
| | - J. Aaron Hogan
- International Center for Tropical Botany Department of Biological Sciences Florida International University Miami Florida USA
| | - Michael S. Ross
- Department of Earth and Environment Florida International University Miami Florida USA
- Southeast Environmental Research Center Florida International University Miami Florida USA
| | - Jay P. Sah
- Southeast Environmental Research Center Florida International University Miami Florida USA
| | - Christopher Baraloto
- International Center for Tropical Botany Department of Biological Sciences Florida International University Miami Florida USA
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21
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Coelho de Souza F, Dexter KG, Phillips OL, Pennington RT, Neves D, Sullivan MJP, Alvarez-Davila E, Alves Á, Amaral I, Andrade A, Aragao LEOC, Araujo-Murakami A, Arets EJMM, Arroyo L, Aymard C GA, Bánki O, Baraloto C, Barroso JG, Boot RGA, Brienen RJW, Brown F, Camargo JLC, Castro W, Chave J, Cogollo A, Comiskey JA, Cornejo-Valverde F, da Costa AL, de Camargo PB, Di Fiore A, Feldpausch TR, Galbraith DR, Gloor E, Goodman RC, Gilpin M, Herrera R, Higuchi N, Honorio Coronado EN, Jimenez-Rojas E, Killeen TJ, Laurance S, Laurance WF, Lopez-Gonzalez G, Lovejoy TE, Malhi Y, Marimon BS, Marimon-Junior BH, Mendoza C, Monteagudo-Mendoza A, Neill DA, Vargas PN, Peñuela Mora MC, Pickavance GC, Pipoly JJ, Pitman NCA, Poorter L, Prieto A, Ramirez F, Roopsind A, Rudas A, Salomão RP, Silva N, Silveira M, Singh J, Stropp J, Ter Steege H, Terborgh J, Thomas-Caesar R, Umetsu RK, Vasquez RV, Célia-Vieira I, Vieira SA, Vos VA, Zagt RJ, Baker TR. Evolutionary diversity is associated with wood productivity in Amazonian forests. Nat Ecol Evol 2019; 3:1754-1761. [PMID: 31712699 DOI: 10.1038/s41559-019-1007-y] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2018] [Accepted: 09/16/2019] [Indexed: 11/09/2022]
Abstract
Higher levels of taxonomic and evolutionary diversity are expected to maximize ecosystem function, yet their relative importance in driving variation in ecosystem function at large scales in diverse forests is unknown. Using 90 inventory plots across intact, lowland, terra firme, Amazonian forests and a new phylogeny including 526 angiosperm genera, we investigated the association between taxonomic and evolutionary metrics of diversity and two key measures of ecosystem function: aboveground wood productivity and biomass storage. While taxonomic and phylogenetic diversity were not important predictors of variation in biomass, both emerged as independent predictors of wood productivity. Amazon forests that contain greater evolutionary diversity and a higher proportion of rare species have higher productivity. While climatic and edaphic variables are together the strongest predictors of productivity, our results show that the evolutionary diversity of tree species in diverse forest stands also influences productivity. As our models accounted for wood density and tree size, they also suggest that additional, unstudied, evolutionarily correlated traits have significant effects on ecosystem function in tropical forests. Overall, our pan-Amazonian analysis shows that greater phylogenetic diversity translates into higher levels of ecosystem function: tropical forest communities with more distantly related taxa have greater wood productivity.
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Affiliation(s)
| | - Kyle G Dexter
- School of Geosciences, University of Edinburgh, Edinburgh, UK.,Royal Botanic Garden Edinburgh, Edinburgh, UK
| | | | - R Toby Pennington
- Royal Botanic Garden Edinburgh, Edinburgh, UK.,Geography Department, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | - Danilo Neves
- Department of Botany, Federal University of Minas Gerais, Belo Horizonte, Brazil
| | | | - Esteban Alvarez-Davila
- Escuela de Ciencias Agropecuarias y Ambientales, Universidad Nacional Abierta y a Distancia, Sede José Celestino Mutis, Bogotá, Colombia
| | - Átila Alves
- Projeto TEAM-Manaus, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | - Ieda Amaral
- Projeto TEAM-Manaus, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | - Ana Andrade
- Biological Dynamics of Forest Fragment Project, INPA and STRI, Manaus, Brazil
| | - Luis E O C Aragao
- Geography Department, College of Life and Environmental Sciences, University of Exeter, Exeter, UK.,National Institute for Space Research, São José dos Campos, Brazil
| | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autonoma Gabriel Rene Moreno, Santa Cruz, Bolivia
| | - Eric J M M Arets
- Wageningen Environmental Research, Wageningen University and Research, Wageningen, the Netherlands
| | - Luzmilla Arroyo
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autonoma Gabriel Rene Moreno, Santa Cruz, Bolivia
| | - Gerardo A Aymard C
- UNELLEZ-Guanare, Programa del Agro y del Mar, Herbario Universitario PORT, Mesa de Cavacas, Venezuela
| | - Olaf Bánki
- Naturalis Biodiversity Center, Leiden, the Netherlands
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL, USA
| | | | - Rene G A Boot
- Tropenbos International, Wageningen, the Netherlands
| | | | | | - José Luís C Camargo
- Biological Dynamics of Forest Fragment Project, INPA and STRI, Manaus, Brazil
| | - Wendeson Castro
- Programa de Pós-Graduação em Ecologia e Manejo de Recursos Naturais, Universidade Federal do Acre, Rio Branco, Brazil
| | - Jerome Chave
- Laboratoire Evolution et Diversité Biologique, Université Toulouse III Paul Sabatier, Toulouse, France
| | - Alvaro Cogollo
- Jardín Botánico de Medellín Joaquín Antonio Uribe, Medellin, Colombia
| | - James A Comiskey
- National Park Service, Fredericksburg, VA, USA.,Smithsonian Institution, Washington DC, USA
| | | | | | - Plínio B de Camargo
- Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, São Paulo, Brazil
| | - Anthony Di Fiore
- Department of Anthropology, University of Texas at Austin, Austin, TX, USA
| | - Ted R Feldpausch
- Geography Department, College of Life and Environmental Sciences, University of Exeter, Exeter, UK
| | | | | | - Rosa C Goodman
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden
| | | | - Rafael Herrera
- Centro de Ecología, IVIC, Caracas, Venezuela.,Institut für Geographie und Regionalforschung, Univerity of Vienna, Vienna, Austria
| | - Niro Higuchi
- Instituto Nacional de Pesquisas da Amazônia, Manaus, Brasil
| | | | | | | | - Susan Laurance
- Centre for Tropical Environmental and Sustainability Science and College of Science and Engineering, James Cook University, Cairns, Queensland, Australia
| | - William F Laurance
- Centre for Tropical Environmental and Sustainability Science and College of Science and Engineering, James Cook University, Cairns, Queensland, Australia
| | | | - Thomas E Lovejoy
- Environmental Science and Policy Department, George Mason University, Washington DC, USA
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | | | | | - Casimiro Mendoza
- Unidad Académica del Trópico, Escuela de Ciencias Forestales, Universidad Mayor de San Simón, Sacta, Bolivia
| | | | - David A Neill
- Facultad de Ingeniería Ambiental, Universidad Estatal Amazónica, Puyo, Ecuador
| | | | | | | | - John J Pipoly
- Broward County Parks and Recreation Division, Davie, FL, USA
| | - Nigel C A Pitman
- Center for Tropical Conservation, Duke University, Durham, NC, USA
| | - Lourens Poorter
- Forest Ecology and Forest Management Group, Wageningen University and Research, Wageningen, the Netherlands
| | - Adriana Prieto
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogota, Colombia
| | - Freddy Ramirez
- Universidad Nacional de la Amazonía Peruana, Iquitos, Peru
| | - Anand Roopsind
- Department of Biological Sciences, Boise State University, Boise, ID, USA
| | - Agustin Rudas
- Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogota, Colombia
| | - Rafael P Salomão
- Museu Paraense Emilio Goeldi, Belém, Brazil.,Universidade Federal Rural da Amazônia, Belém, Brasil
| | | | - Marcos Silveira
- Museu Universitário, Centro de Ciências Biológicas e da Natureza, Universidade Federal do Acre, Rio Branco, Brazil
| | - James Singh
- Guyana Forestry Commission, Georgetown, Guyana
| | - Juliana Stropp
- Institute of Biological and Health Sciences, Federal University of Alagoas Maceio, Maceio, Brazil
| | - Hans Ter Steege
- Naturalis Biodiversity Center, Leiden, the Netherlands.,Systems Ecology, Vrije Universiteit, Amsterdam, the Netherlands
| | - John Terborgh
- Department of Biology and Florida Museum of Natural History, University of Florida, Gainesville, FL, USA.,School of Science and Engineering, James Cook University, Cairns, Queensland, Australia
| | - Raquel Thomas-Caesar
- Iwokrama International Centre for Rainforest Conservation and Development, Georgetown, Guyana
| | | | | | | | - Simone A Vieira
- Núcleo de Estudos e Pesquisas Ambientais, Universidade Estadual de Campinas, Campinas, Brazil
| | - Vincent A Vos
- Centro de Investigación y Promoción del Campesinado-Regional Norte Amazónico, Riberalta, Bolivia.,Universidad Autónoma del Beni, Riberalta, Bolivia
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22
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Grossiord C, Christoffersen B, Alonso-Rodríguez AM, Anderson-Teixeira K, Asbjornsen H, Aparecido LMT, Carter Berry Z, Baraloto C, Bonal D, Borrego I, Burban B, Chambers JQ, Christianson DS, Detto M, Faybishenko B, Fontes CG, Fortunel C, Gimenez BO, Jardine KJ, Kueppers L, Miller GR, Moore GW, Negron-Juarez R, Stahl C, Swenson NG, Trotsiuk V, Varadharajan C, Warren JM, Wolfe BT, Wei L, Wood TE, Xu C, McDowell NG. Precipitation mediates sap flux sensitivity to evaporative demand in the neotropics. Oecologia 2019; 191:519-530. [DOI: 10.1007/s00442-019-04513-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2019] [Accepted: 09/16/2019] [Indexed: 01/16/2023]
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23
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Klarenberg G, Muñoz-Carpena R, Perz S, Baraloto C, Marsik M, Southworth J, Zhu L. A spatiotemporal natural-human database to evaluate road development impacts in an Amazon trinational frontier. Sci Data 2019; 6:93. [PMID: 31209221 PMCID: PMC6572834 DOI: 10.1038/s41597-019-0093-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2018] [Accepted: 05/10/2019] [Indexed: 11/19/2022] Open
Abstract
Road construction and paving bring socio-economic benefits to receiving regions but can also be drivers of deforestation and land cover change. Road infrastructure often increases migration and illegal economic activities, which in turn affect local hydrology, wildlife, vegetation structure and dynamics, and biodiversity. To evaluate the full breadth of impacts from a coupled natural-human systems perspective, information is needed over a sufficient timespan to include pre- and post-road paving conditions. In addition, the spatial scale should be appropriate to link local human activities and biophysical system components, while also allowing for upscaling to the regional scale. A database was developed for the tri-national frontier in the Southwestern Amazon, where the Inter-Oceanic Highway was constructed through an area of high biological value and cultural diversity. Extensive socio-economic surveys and botanical field work are combined with remote sensing and reanalysis data to provide a rich and unique database, suitable for coupled natural-human systems research.
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Affiliation(s)
- Geraldine Klarenberg
- Department of Wildlife Ecology and Conservation, University of Florida, Gainesville, Florida, USA
| | - Rafael Muñoz-Carpena
- Department of Agricultural and Biological Engineering, University of Florida, Gainesville, Florida, USA.
| | - Stephen Perz
- Department of Sociology and Criminology & Law, University of Florida, Gainesville, Florida, USA
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, Florida, USA
| | - Matthew Marsik
- Integrated Data Repository, Clinical and Translational Science Institute and UF Health, University of Florida, Gainesville, Florida, USA
| | - Jane Southworth
- Department of Geography, University of Florida, Gainesville, Florida, USA
| | - Likai Zhu
- Shandong Provincial Key Laboratory of Water and Soil Conservation & Environmental Protection, College of Resources and Environment, Linyi University, Linyi, China
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24
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Subedi SC, Ross MS, Sah JP, Redwine J, Baraloto C. Trait‐based community assembly pattern along a forest succession gradient in a seasonally dry tropical forest. Ecosphere 2019. [DOI: 10.1002/ecs2.2719] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Affiliation(s)
- Suresh C. Subedi
- Department of Earth and Environment Florida International University Miami Florida 33199 USA
| | - Michael S. Ross
- Department of Earth and Environment Florida International University Miami Florida 33199 USA
- Southeast Environmental Research Center Florida International University Miami Florida 33199 USA
| | - Jay P. Sah
- Southeast Environmental Research Center Florida International University Miami Florida 33199 USA
| | - Jed Redwine
- Everglades National Park National Park Service Homestead Florida 33034 USA
| | - Christopher Baraloto
- Department of Biological Sciences Florida International University Miami Florida 33199 USA
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25
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Draper FC, Asner GP, Honorio Coronado EN, Baker TR, García-Villacorta R, Pitman NCA, Fine PVA, Phillips OL, Zárate Gómez R, Amasifuén Guerra CA, Flores Arévalo M, Vásquez Martínez R, Brienen RJW, Monteagudo-Mendoza A, Torres Montenegro LA, Valderrama Sandoval E, Roucoux KH, Ramírez Arévalo FR, Mesones Acuy Í, Del Aguila Pasquel J, Tagle Casapia X, Flores Llampazo G, Corrales Medina M, Reyna Huaymacari J, Baraloto C. Dominant tree species drive beta diversity patterns in western Amazonia. Ecology 2019; 100:e02636. [PMID: 30693479 DOI: 10.1002/ecy.2636] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Revised: 12/11/2018] [Accepted: 12/20/2018] [Indexed: 02/02/2023]
Abstract
The forests of western Amazonia are among the most diverse tree communities on Earth, yet this exceptional diversity is distributed highly unevenly within and among communities. In particular, a small number of dominant species account for the majority of individuals, whereas the large majority of species are locally and regionally extremely scarce. By definition, dominant species contribute little to local species richness (alpha diversity), yet the importance of dominant species in structuring patterns of spatial floristic turnover (beta diversity) has not been investigated. Here, using a network of 207 forest inventory plots, we explore the role of dominant species in determining regional patterns of beta diversity (community-level floristic turnover and distance-decay relationships) across a range of habitat types in northern lowland Peru. Of the 2,031 recorded species in our data set, only 99 of them accounted for 50% of individuals. Using these 99 species, it was possible to reconstruct the overall features of regional beta diversity patterns, including the location and dispersion of habitat types in multivariate space, and distance-decay relationships. In fact, our analysis demonstrated that regional patterns of beta diversity were better maintained by the 99 dominant species than by the 1,932 others, whether quantified using species-abundance data or species presence-absence data. Our results reveal that dominant species are normally common only in a single forest type. Therefore, dominant species play a key role in structuring western Amazonian tree communities, which in turn has important implications, both practically for designing effective protected areas, and more generally for understanding the determinants of beta diversity patterns.
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Affiliation(s)
- Frederick C Draper
- Center for Global Discovery and Conservation Science, Arizona State University, 975 S. Myrtle Ave Tempe, Arizona, 85281, USA.,Department of Global Ecology, Carnegie Institution for Science, 260 Panama Street, Stanford, California, 94305, USA.,International Center for Tropical Botany, Florida International University, 4013 South Douglas Road, Miami, Florida, 33133, USA
| | - Gregory P Asner
- Center for Global Discovery and Conservation Science, Arizona State University, 975 S. Myrtle Ave Tempe, Arizona, 85281, USA.,Department of Global Ecology, Carnegie Institution for Science, 260 Panama Street, Stanford, California, 94305, USA
| | | | - Timothy R Baker
- School of Geography, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - Roosevelt García-Villacorta
- Department of Ecology and Evolutionary Biology, Cornell University, E145 Corson Hall, Ithaca, New york, 14853, USA
| | - Nigel C A Pitman
- Keller Science Action Center, The Field Museum, 1400 S. Lake Shore Dr, Chicago, Illinois, 60605, USA
| | - Paul V A Fine
- Department of Integrative Biology, University of California, 1005 Valley Life Sciences Building #3140 Berkeley, California, 94720, USA
| | - Oliver L Phillips
- School of Geography, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - Ricardo Zárate Gómez
- Instituto de Investigaciones de la Amazonía Peruana, Av. Quiñones 0784, Iquitos, Loreto, Peru
| | - Carlos A Amasifuén Guerra
- Facultad de Biología, Universidad Nacional de la Amazonía Peruana, Sargento Lores 385, Iquitos, Loreto, Peru
| | - Manuel Flores Arévalo
- Facultad de Biología, Universidad Nacional de la Amazonía Peruana, Sargento Lores 385, Iquitos, Loreto, Peru
| | | | - Roel J W Brienen
- School of Geography, University of Leeds, Leeds, LS2 9JT, United Kingdom
| | - Abel Monteagudo-Mendoza
- Jardín Botanico de Missouri, Prolongación Bolognesi Lote 6, Oxapampa, Pasco, Peru.,Universidad Nacional de San Antonio Abad del Cusco, Av. de La Cultura 773, Cusco, 08000, Peru
| | - Luis A Torres Montenegro
- Facultad de Biología, Universidad Nacional de la Amazonía Peruana, Sargento Lores 385, Iquitos, Loreto, Peru
| | - Elvis Valderrama Sandoval
- Facultad de Biología, Universidad Nacional de la Amazonía Peruana, Sargento Lores 385, Iquitos, Loreto, Peru
| | - Katherine H Roucoux
- School of Geography and Sustainable Development, University of St. Andrews, North Street, St. Andrews, KY16 9AL, United Kingdom
| | - Fredy R Ramírez Arévalo
- Facultad de Ciencias Forestales, Universidad Nacional de la Amazonía Peruana, Sargento Lores 385, Iquitos, Loreto, Peru
| | - Ítalo Mesones Acuy
- Department of Integrative Biology, University of California, 1005 Valley Life Sciences Building #3140 Berkeley, California, 94720, USA
| | - Jhon Del Aguila Pasquel
- Instituto de Investigaciones de la Amazonía Peruana, Av. Quiñones 0784, Iquitos, Loreto, Peru.,School of Forest Resources and Environmental Science, Michigan Technological University, 1400 Townsend Drive, Houghton, Michigan, 49931, USA
| | - Ximena Tagle Casapia
- Instituto de Investigaciones de la Amazonía Peruana, Av. Quiñones 0784, Iquitos, Loreto, Peru
| | | | | | - José Reyna Huaymacari
- Facultad de Biología, Universidad Nacional de la Amazonía Peruana, Sargento Lores 385, Iquitos, Loreto, Peru
| | - Christopher Baraloto
- International Center for Tropical Botany, Florida International University, 4013 South Douglas Road, Miami, Florida, 33133, USA
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26
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Fichaux M, Béchade B, Donald J, Weyna A, Delabie JHC, Murienne J, Baraloto C, Orivel J. Habitats shape taxonomic and functional composition of Neotropical ant assemblages. Oecologia 2019; 189:501-513. [PMID: 30701386 DOI: 10.1007/s00442-019-04341-z] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2017] [Accepted: 01/15/2019] [Indexed: 10/27/2022]
Abstract
Determining assembly rules of co-occurring species persists as a fundamental goal in community ecology. At local scales, the relative importance of environmental filtering vs. competitive exclusion remains a subject of debate. In this study, we assessed the relative importance of habitat filtering and competition in structuring understory ant communities in tropical forests of French Guiana. Leaf-litter ants were collected using pitfall and Winkler traps across swamp, slope and plateau forests near Saül, French Guiana. We used a combination of univariate and multivariate analyses to evaluate trait response of ants to habitat characteristics. Null model analyses were used to investigate the effects of habitat filtering and competitive interactions on community assembly at the scale of assemblages and sampling points, respectively. Swamp forests presented a much lower taxonomic and functional richness compared to slope and plateau forests. Furthermore, marked differences in taxonomic and functional composition were observed between swamp forests and slope or plateau forests. We found weak evidence for competitive exclusion based on null models. Nevertheless, the contrasting trait composition observed between habitats revealed differences in the ecological attributes of the species in the different forest habitats. Our analyses suggest that competitive interactions may not play an important role in structuring leaf-litter ant assemblages locally. Rather, habitats are responsible for driving both taxonomic and functional composition of ant communities.
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Affiliation(s)
- Mélanie Fichaux
- CNRS, UMR Ecologie des Forêts de Guyane (EcoFoG), AgroParisTech, CIRAD, INRA, Université de Guyane, Université des Antilles, Campus Agronomique, BP 316, 97379, Kourou Cedex, France.
| | - Benoît Béchade
- CNRS, UMR Ecologie des Forêts de Guyane (EcoFoG), AgroParisTech, CIRAD, INRA, Université de Guyane, Université des Antilles, Campus Agronomique, BP 316, 97379, Kourou Cedex, France
| | - Julian Donald
- CNRS, UMR Ecologie des Forêts de Guyane (EcoFoG), AgroParisTech, CIRAD, INRA, Université de Guyane, Université des Antilles, Campus Agronomique, BP 316, 97379, Kourou Cedex, France.,Laboratoire EDB (UMR 5174: CNRS, Université Toulouse 3 Paul Sabatier, IRD), Université Paul Sabatier, bâtiment 4R1, 118, route de Narbonne, 31062, Toulouse Cedex 9, France
| | - Arthur Weyna
- CNRS, UMR Ecologie des Forêts de Guyane (EcoFoG), AgroParisTech, CIRAD, INRA, Université de Guyane, Université des Antilles, Campus Agronomique, BP 316, 97379, Kourou Cedex, France
| | - Jacques Hubert Charles Delabie
- Laboratório de Mirmecologia, CEPEC, CEPLAC, Caixa Postal 7, Itabuna, BA, 45600-970, Brazil.,Departamento de Ciências Agrárias e Ambientais, Universidade Estadual de Santa Cruz, Rodovia Jorge Amado Km 16, Ilheus, BA, 45662-900, Brazil
| | - Jérôme Murienne
- Laboratoire EDB (UMR 5174: CNRS, Université Toulouse 3 Paul Sabatier, IRD), Université Paul Sabatier, bâtiment 4R1, 118, route de Narbonne, 31062, Toulouse Cedex 9, France
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
| | - Jérôme Orivel
- CNRS, UMR Ecologie des Forêts de Guyane (EcoFoG), AgroParisTech, CIRAD, INRA, Université de Guyane, Université des Antilles, Campus Agronomique, BP 316, 97379, Kourou Cedex, France
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27
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Esquivel‐Muelbert A, Baker TR, Dexter KG, Lewis SL, Brienen RJW, Feldpausch TR, Lloyd J, Monteagudo‐Mendoza A, Arroyo L, Álvarez-Dávila E, Higuchi N, Marimon BS, Marimon-Junior BH, Silveira M, Vilanova E, Gloor E, Malhi Y, Chave J, Barlow J, Bonal D, Davila Cardozo N, Erwin T, Fauset S, Hérault B, Laurance S, Poorter L, Qie L, Stahl C, Sullivan MJP, ter Steege H, Vos VA, Zuidema PA, Almeida E, Almeida de Oliveira E, Andrade A, Vieira SA, Aragão L, Araujo‐Murakami A, Arets E, Aymard C GA, Baraloto C, Camargo PB, Barroso JG, Bongers F, Boot R, Camargo JL, Castro W, Chama Moscoso V, Comiskey J, Cornejo Valverde F, Lola da Costa AC, del Aguila Pasquel J, Di Fiore A, Fernanda Duque L, Elias F, Engel J, Flores Llampazo G, Galbraith D, Herrera Fernández R, Honorio Coronado E, Hubau W, Jimenez‐Rojas E, Lima AJN, Umetsu RK, Laurance W, Lopez‐Gonzalez G, Lovejoy T, Aurelio Melo Cruz O, Morandi PS, Neill D, Núñez Vargas P, Pallqui Camacho NC, Parada Gutierrez A, Pardo G, Peacock J, Peña‐Claros M, Peñuela‐Mora MC, Petronelli P, Pickavance GC, Pitman N, Prieto A, Quesada C, Ramírez‐Angulo H, Réjou‐Méchain M, Restrepo Correa Z, Roopsind A, Rudas A, Salomão R, Silva N, Silva Espejo J, Singh J, Stropp J, Terborgh J, Thomas R, Toledo M, Torres‐Lezama A, Valenzuela Gamarra L, van de Meer PJ, van der Heijden G, van der Hout P, Vasquez Martinez R, Vela C, Vieira ICG, Phillips OL. Compositional response of Amazon forests to climate change. Glob Chang Biol 2019; 25:39-56. [PMID: 30406962 PMCID: PMC6334637 DOI: 10.1111/gcb.14413] [Citation(s) in RCA: 123] [Impact Index Per Article: 24.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2018] [Revised: 06/27/2018] [Accepted: 07/04/2018] [Indexed: 05/05/2023]
Abstract
Most of the planet's diversity is concentrated in the tropics, which includes many regions undergoing rapid climate change. Yet, while climate-induced biodiversity changes are widely documented elsewhere, few studies have addressed this issue for lowland tropical ecosystems. Here we investigate whether the floristic and functional composition of intact lowland Amazonian forests have been changing by evaluating records from 106 long-term inventory plots spanning 30 years. We analyse three traits that have been hypothesized to respond to different environmental drivers (increase in moisture stress and atmospheric CO2 concentrations): maximum tree size, biogeographic water-deficit affiliation and wood density. Tree communities have become increasingly dominated by large-statured taxa, but to date there has been no detectable change in mean wood density or water deficit affiliation at the community level, despite most forest plots having experienced an intensification of the dry season. However, among newly recruited trees, dry-affiliated genera have become more abundant, while the mortality of wet-affiliated genera has increased in those plots where the dry season has intensified most. Thus, a slow shift to a more dry-affiliated Amazonia is underway, with changes in compositional dynamics (recruits and mortality) consistent with climate-change drivers, but yet to significantly impact whole-community composition. The Amazon observational record suggests that the increase in atmospheric CO2 is driving a shift within tree communities to large-statured species and that climate changes to date will impact forest composition, but long generation times of tropical trees mean that biodiversity change is lagging behind climate change.
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28
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Hogan JA, Hérault B, Bachelot B, Gorel A, Jounieaux M, Baraloto C. Understanding the recruitment response of juvenile Neotropical trees to logging intensity using functional traits. Ecol Appl 2018; 28:1998-2010. [PMID: 29999560 DOI: 10.1002/eap.1776] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2018] [Accepted: 06/19/2018] [Indexed: 06/08/2023]
Abstract
Selective logging remains a widespread practice in tropical forests, yet the long-term effects of timber harvest on juvenile tree (i.e., sapling) recruitment across the hundreds of species occurring in most tropical forests remain difficult to predict. This uncertainty could potentially exacerbate threats to some of the thousands of timber-valuable tree species in the Amazon. Our objective was to determine to what extent long-term responses of tree species regeneration in logged forests can be explained by their functional traits. We integrate functional trait data for 13 leaf, stem, and seed traits from 25 canopy tree species with a range of life histories, such as the pioneer Goupia glabra and the shade-tolerant Iryanthera hostmannii, together with over 30 yr of sapling monitoring in permanent plots spanning a gradient of harvest intensity at the Paracou Forest Disturbance Experiment (PFDE), French Guiana. We anticipated that more intensive logging would increase recruitment of pioneer species with higher specific leaf area, lower wood densities, and smaller seeds, due to the removal of canopy trees. We define a recruitment response metric to compare sapling regeneration to timber harvest intensity across species. Although not statistically significant, sapling recruitment decreased with logging intensity for eight of 23 species and these species tended to have large seeds and dense wood. A generalized linear mixed model fit using specific leaf area, seed mass, and twig density data explained about 45% of the variability in sapling dynamics. Effects of specific leaf area outweighed those of seed mass and wood density in explaining recruitment dynamics of the sapling community in response to increasing logging intensity. The most intense treatment at the PFDE, which includes stand thinning of non-timber-valuable adult trees and poison-girdling for competitive release, showed evidence of shifting community composition in sapling regeneration at the 30-yr mark, toward species with less dense wood, lighter seeds, and higher specific leaf area. Our results indicate that high-intensity logging can have lasting effects on stand regeneration dynamics and that functional traits can help simplify general trends of sapling recruitment for highly diverse logged tropical forests.
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Affiliation(s)
- J Aaron Hogan
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, Florida, 33174, USA
| | - Bruno Hérault
- CIRAD, Univ Montpellier, UR Forests & Societies, Montpellier, France
- INPHB, Institut National Polytechnique Félix Houphouët-Boigny, Yamoussoukro, Ivory Coast
| | - Bénédicte Bachelot
- UMR EcoFoG (AgroParisTech, CIRAD, CNRS, INRA, Université des Antilles, Université de la Guyane), Kourou, French Guiana
- Department of BioSciences, Rice University, Houston, Texas, 77251, USA
| | - Anaїs Gorel
- UMR EcoFoG (AgroParisTech, CIRAD, CNRS, INRA, Université des Antilles, Université de la Guyane), Kourou, French Guiana
- BOISE Unit, Management of Forest Resources, Gembloux Agro-Bio Tech, Université de Liège, Liège, Belgium
| | - Marianne Jounieaux
- UMR EcoFoG (AgroParisTech, CIRAD, CNRS, INRA, Université des Antilles, Université de la Guyane), Kourou, French Guiana
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, Florida, 33174, USA
- UMR EcoFoG (AgroParisTech, CIRAD, CNRS, INRA, Université des Antilles, Université de la Guyane), Kourou, French Guiana
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29
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Perez TM, Valverde-Barrantes O, Bravo C, Taylor TC, Fadrique B, Hogan JA, Pardo CJ, Stroud JT, Baraloto C, Feeley KJ. Botanic gardens are an untapped resource for studying the functional ecology of tropical plants. Philos Trans R Soc Lond B Biol Sci 2018; 374:rstb.2017.0390. [PMID: 30455208 DOI: 10.1098/rstb.2017.0390] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/18/2018] [Indexed: 11/12/2022] Open
Abstract
Functional traits are increasingly used to understand the ecology of plants and to predict their responses to global changes. Unfortunately, trait data are unavailable for the majority of plant species. The lack of trait data is especially prevalent for hard-to-measure traits and for tropical plant species, potentially owing to the many inherent difficulties of working with species in remote, hyperdiverse rainforest systems. The living collections of botanic gardens provide convenient access to large numbers of tropical plant species and can potentially be used to quickly augment trait databases and advance our understanding of species' responses to climate change. In this review, we quantitatively assess the availability of trait data for tropical versus temperate species, the diversity of species available for sampling in several exemplar tropical botanic gardens and the validity of garden-based leaf and root trait measurements. Our analyses support the contention that the living collections of botanic gardens are a valuable scientific resource that can contribute significantly to research on plant functional ecology and conservation.This article is part of the theme issue 'Biological collections for understanding biodiversity in the Anthropocene'.
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Affiliation(s)
- Timothy M Perez
- Department of Biology, University of Miami, Coral Gables, FL 33146, USA .,Fairchild Tropical Botanic Garden, Coral Gables, FL 33156, USA
| | - Oscar Valverde-Barrantes
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL 33199, USA
| | - Catherine Bravo
- Department of Biology, University of Miami, Coral Gables, FL 33146, USA.,Fairchild Tropical Botanic Garden, Coral Gables, FL 33156, USA
| | - Tyeen C Taylor
- Department of Biology, University of Miami, Coral Gables, FL 33146, USA.,Fairchild Tropical Botanic Garden, Coral Gables, FL 33156, USA
| | - Belén Fadrique
- Department of Biology, University of Miami, Coral Gables, FL 33146, USA
| | - J Aaron Hogan
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL 33199, USA
| | - Christine J Pardo
- Department of Biology, University of Miami, Coral Gables, FL 33146, USA.,Fairchild Tropical Botanic Garden, Coral Gables, FL 33156, USA
| | - James T Stroud
- Fairchild Tropical Botanic Garden, Coral Gables, FL 33156, USA.,Department of Biology, Washington University in St Louis, St Louis, MO 63130, USA
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL 33199, USA
| | - Kenneth J Feeley
- Department of Biology, University of Miami, Coral Gables, FL 33146, USA .,Fairchild Tropical Botanic Garden, Coral Gables, FL 33156, USA
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30
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Vleminckx J, Salazar D, Fortunel C, Mesones I, Dávila N, Lokvam J, Beckley K, Baraloto C, Fine PVA. Divergent Secondary Metabolites and Habitat Filtering Both Contribute to Tree Species Coexistence in the Peruvian Amazon. Front Plant Sci 2018; 9:836. [PMID: 29971085 PMCID: PMC6018647 DOI: 10.3389/fpls.2018.00836] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Accepted: 05/29/2018] [Indexed: 06/08/2023]
Abstract
Little is known about the mechanisms promoting or limiting the coexistence of functionally divergent species in hyperdiverse tropical tree genera. Density-dependent enemy attacks have been proposed to be a major driver for the local coexistence of chemically divergent congeneric species. At the same time, we expect local soil conditions to favor the coexistence of species sharing similar functional traits related to resource use strategies, while environmental heterogeneity would promote the diversity of these traits at both local and large spatial scales. To test how these traits mediate species coexistence, we used functional trait data for 29 species from the tree genus Protium (Burseraceae), collected in 19 plots (2 ha each) in the Peruvian Amazon. We characterized the presence-absence of 189 plant secondary metabolites (SM) for 27 of these species, and 14 functional traits associated with resource use strategies (RUT) for 16 species. Based on these data, we found that SM were significantly more dissimilar than null expectations for species co-occurring within plots, whereas RUT were significantly more similar. These results were consistent with the hypothesis that density-dependent enemy attacks contribute to the local coexistence of congeneric species displaying divergent chemical defenses, whereas local habitat conditions filter species with similar RUT. Using measurements of nine soil properties in each plot, we also found a significant turnover of RUT traits with increasing dissimilarity of soil texture and nutrient availabilities, providing support for the hypothesis that soil heterogeneity maintains functional diversity at larger spatial scales (from 500 m up to ca. 200 km) in Protium communities. Our study provides new evidence suggesting that density-dependent enemy attacks and soil heterogeneity both contribute to maintaining high species richness in diverse tropical forests.
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Affiliation(s)
- Jason Vleminckx
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
- Department of Biological Sciences, Florida International University, Miami, FL, United States
| | - Diego Salazar
- Department of Biological Sciences, Florida International University, Miami, FL, United States
| | - Claire Fortunel
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA, United States
- AMAP (botAnique et Modélisation de l’Architecture des Plantes et des Végétations), IRD, CIRAD, CNRS, INRA, Université de Montpellier, Montpellier, France
| | - Italo Mesones
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
| | - Nállarett Dávila
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
| | - John Lokvam
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
| | - Krista Beckley
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
| | - Christopher Baraloto
- Department of Biological Sciences, Florida International University, Miami, FL, United States
| | - Paul V. A. Fine
- Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States
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31
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Santiago LS, De Guzman ME, Baraloto C, Vogenberg JE, Brodie M, Hérault B, Fortunel C, Bonal D. Coordination and trade-offs among hydraulic safety, efficiency and drought avoidance traits in Amazonian rainforest canopy tree species. New Phytol 2018; 218:1015-1024. [PMID: 29457226 DOI: 10.1111/nph.15058] [Citation(s) in RCA: 59] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 01/17/2018] [Indexed: 05/18/2023]
Abstract
Predicting responses of tropical forests to climate change-type drought is challenging because of high species diversity. Detailed characterization of tropical tree hydraulic physiology is necessary to evaluate community drought vulnerability and improve model parameterization. Here, we measured xylem hydraulic conductivity (hydraulic efficiency), xylem vulnerability curves (hydraulic safety), sapwood pressure-volume curves (drought avoidance) and wood density on emergent branches of 14 common species of Eastern Amazonian canopy trees in Paracou, French Guiana across species with the densest and lightest wood in the plot. Our objectives were to evaluate relationships among hydraulic traits to identify strategies and test the ability of easy-to-measure traits as proxies for hard-to-measure hydraulic traits. Xylem efficiency was related to capacitance, sapwood water content and turgor loss point, and other drought avoidance traits, but not to xylem safety (P50 ). Wood density was correlated (r = -0.57 to -0.97) with sapwood pressure-volume traits, forming an axis of hydraulic strategy variation. In contrast to drier sites where hydraulic safety plays a greater role, tropical trees in this humid tropical site varied along an axis with low wood density, high xylem efficiency and high capacitance at one end of the spectrum, and high wood density and low turgor loss point at the other.
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Affiliation(s)
- Louis S Santiago
- Department of Botany & Plant Sciences, University of California, 2150 Batchelor Hall, Riverside, CA, 92521, USA
- Smithsonian Tropical Research Institute, Balboa, Ancón, Panamá, Republic of Panamá
| | - Mark E De Guzman
- Department of Botany & Plant Sciences, University of California, 2150 Batchelor Hall, Riverside, CA, 92521, USA
| | - Christopher Baraloto
- Department of Biological Sciences, Florida International University, Miami, FL, 33199, USA
| | - Jacob E Vogenberg
- Department of Botany & Plant Sciences, University of California, 2150 Batchelor Hall, Riverside, CA, 92521, USA
| | - Max Brodie
- Department of Botany & Plant Sciences, University of California, 2150 Batchelor Hall, Riverside, CA, 92521, USA
| | - Bruno Hérault
- CIRAD, UMR Ecologie des Forêts de Guyane, Kourou, 97379, France
| | - Claire Fortunel
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, 90095, USA
| | - Damien Bonal
- INRA, UMR Silva, AgroParisTech, Université de Lorraine, 54000, Nancy, France
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32
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Coelho de Souza F, Dexter KG, Phillips OL, Brienen RJW, Chave J, Galbraith DR, Lopez Gonzalez G, Monteagudo Mendoza A, Pennington RT, Poorter L, Alexiades M, Álvarez-Dávila E, Andrade A, Aragão LEOC, Araujo-Murakami A, Arets EJMM, Aymard C GA, Baraloto C, Barroso JG, Bonal D, Boot RGA, Camargo JLC, Comiskey JA, Valverde FC, de Camargo PB, Di Fiore A, Elias F, Erwin TL, Feldpausch TR, Ferreira L, Fyllas NM, Gloor E, Herault B, Herrera R, Higuchi N, Honorio Coronado EN, Killeen TJ, Laurance WF, Laurance S, Lloyd J, Lovejoy TE, Malhi Y, Maracahipes L, Marimon BS, Marimon-Junior BH, Mendoza C, Morandi P, Neill DA, Vargas PN, Oliveira EA, Lenza E, Palacios WA, Peñuela-Mora MC, Pipoly JJ, Pitman NCA, Prieto A, Quesada CA, Ramirez-Angulo H, Rudas A, Ruokolainen K, Salomão RP, Silveira M, Stropp J, Ter Steege H, Thomas-Caesar R, van der Hout P, van der Heijden GMF, van der Meer PJ, Vasquez RV, Vieira SA, Vilanova E, Vos VA, Wang O, Young KR, Zagt RJ, Baker TR. Evolutionary heritage influences Amazon tree ecology. Proc Biol Sci 2017; 283:rspb.2016.1587. [PMID: 27974517 PMCID: PMC5204144 DOI: 10.1098/rspb.2016.1587] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2016] [Accepted: 11/03/2016] [Indexed: 12/03/2022] Open
Abstract
Lineages tend to retain ecological characteristics of their ancestors through time. However, for some traits, selection during evolutionary history may have also played a role in determining trait values. To address the relative importance of these processes requires large-scale quantification of traits and evolutionary relationships among species. The Amazonian tree flora comprises a high diversity of angiosperm lineages and species with widely differing life-history characteristics, providing an excellent system to investigate the combined influences of evolutionary heritage and selection in determining trait variation. We used trait data related to the major axes of life-history variation among tropical trees (e.g. growth and mortality rates) from 577 inventory plots in closed-canopy forest, mapped onto a phylogenetic hypothesis spanning more than 300 genera including all major angiosperm clades to test for evolutionary constraints on traits. We found significant phylogenetic signal (PS) for all traits, consistent with evolutionarily related genera having more similar characteristics than expected by chance. Although there is also evidence for repeated evolution of pioneer and shade tolerant life-history strategies within independent lineages, the existence of significant PS allows clearer predictions of the links between evolutionary diversity, ecosystem function and the response of tropical forests to global change.
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Affiliation(s)
| | - Kyle G Dexter
- School of Geosciences, University of Edinburgh, 201 Crew Building, King's Buildings, Edinburgh EH9 3FF, UK.,Royal Botanic Garden Edinburgh, 20a Inverleith Row, Edinburgh EH3 5LR, UK
| | | | | | - Jerome Chave
- Université Paul Sabatier CNRS, UMR 5174 Evolution et Diversité Biologique, bâtiment 4R1, Toulouse 31062, France
| | | | | | - Abel Monteagudo Mendoza
- Jardín Botánico de Missouri, Prolongacion Bolognesi Mz. E, Lote 6, Oxapampa, Pasco, Peru.,Universidad Nacional de San Antonio Abad del Cusco, Av. de la Cultura N° 733, Cusco, Peru
| | - R Toby Pennington
- Royal Botanic Garden Edinburgh, 20a Inverleith Row, Edinburgh EH3 5LR, UK
| | - Lourens Poorter
- Forest Ecology and Forest Management Group, Wageningen University and Research, PO Box 47, 6700 AA Wageningen, The Netherlands
| | - Miguel Alexiades
- School of Anthropology and Conservation, University of Kent, Marlowe Building, Canterbury, Kent CT2 7NR, UK
| | | | - Ana Andrade
- Biological Dynamics of Forest Fragment Project (INPA & STRI), C.P. 478, Manaus, Amazonas 69.011-970, Brazil
| | - Luis E O C Aragão
- Geography, College of Life and Environmental Sciences, University of Exeter, Drive, Exeter, Rennes EX4 4RJ, UK.,National Institute for Space Research (INPE), São José dos Campos, São Paulo, Brazil
| | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autonoma Gabriel Rene Moreno, Casilla 2489, Av. Irala 565, Santa Cruz, Bolivia
| | - Eric J M M Arets
- Alterra, Wageningen University and Research Centre, PO Box 47, Wageningen 6700 AA, The Netherlands
| | - Gerardo A Aymard C
- UNELLEZ-Guanare, Programa del Agro y del Mar, Herbario Universitario (PORT), Mesa de Cavacas, Estado Portuguesa 3350, Venezuela
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, FL 33199, USA
| | - Jorcely G Barroso
- Universidade Federal do Acre, Campus de Cruzeiro do Sul, Acre, Brazil
| | - Damien Bonal
- INRA, UMR 1137 'Ecologie et Ecophysiologie Forestiere', Champenoux 54280, France
| | - Rene G A Boot
- Tropenbos International, PO Box 232, Wageningen 6700 AE, The Netherlands
| | - José L C Camargo
- Biological Dynamics of Forest Fragment Project (INPA & STRI), C.P. 478, Manaus, Amazonas 69.011-970, Brazil
| | - James A Comiskey
- National Park Service, 120 Chatham Lane, Fredericksburg, VA 22405, USA.,Smithsonian Institution, 1100 Jefferson Dr, SW, Washington, DC 20560, USA
| | | | - Plínio B de Camargo
- Centro de Energia Nuclear na Agricultura, Universidade de São Paulo, São Paulo, Sao Paulo, Brazil
| | - Anthony Di Fiore
- Department of Anthropology, University of Texas at Austin, SAC Room 5.150, 2201 Speedway Stop C3200, Austin, TX 78712, USA
| | - Fernando Elias
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, 78.690-000, Nova Xavantina, Mato Grosso, Brazil
| | - Terry L Erwin
- Department of Entomology, Smithsonian Institution, PO Box 37012, MRC 187, Washington, DC 20013-7012, USA
| | - Ted R Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Drive, Exeter, Rennes EX4 4RJ, UK
| | - Leandro Ferreira
- Museu Paraense Emilio Goeldi, C.P. 399, 66.040-170, Belém, Pará, Brazil
| | | | - Emanuel Gloor
- School of Geography, University of Leeds, Leeds LS2 9JT, UK
| | - Bruno Herault
- Cirad, UMR EcoFoG (AgroParisTech, CNRS, Inra, U Antilles, U Guyane), Campus Agronomique, Kourou 97310, French Guiana
| | - Rafael Herrera
- Centro de Ecología IVIC, Caracas, Venezuela.,Institut für Geographie und Regionalforschung, University of Vienna, Wien, Austria
| | - Niro Higuchi
- INPA, Av. André Araújo, 2.936 - Petrópolis - 69.067-375, Manaus, Amazonas, Brazil
| | | | | | - William F Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Science and Engineering, James Cook University, Cairns, Queensland 4878, Australia
| | - Susan Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Science and Engineering, James Cook University, Cairns, Queensland 4878, Australia
| | - Jon Lloyd
- Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst, Road, Ascot, Berkshire SL5 7PY, UK
| | - Thomas E Lovejoy
- Environmental Science and Policy, and the Department of Public and International Affairs, George Mason University (GMU), Washington, DC, USA
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Leandro Maracahipes
- Programa de Pós-graduação em Ecologia e Evolução, Universidade Federal de Goias, Goiânia, Goias, Brazil
| | - Beatriz S Marimon
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, 78.690-000, Nova Xavantina, Mato Grosso, Brazil
| | - Ben H Marimon-Junior
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, 78.690-000, Nova Xavantina, Mato Grosso, Brazil
| | - Casimiro Mendoza
- Escuela de Ciencias Forestales, Unidad Académica del Trópico, Universidad Mayor de San Simón, Sacta, Bolivia
| | - Paulo Morandi
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, 78.690-000, Nova Xavantina, Mato Grosso, Brazil
| | - David A Neill
- Universidad Estatal Amazónica, Puyo, Pastaza, Ecuador
| | - Percy Núñez Vargas
- Universidad Nacional de San Antonio Abad del Cusco, Av. de la Cultura N° 733, Cusco, Peru
| | - Edmar A Oliveira
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, 78.690-000, Nova Xavantina, Mato Grosso, Brazil
| | - Eddie Lenza
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, 78.690-000, Nova Xavantina, Mato Grosso, Brazil
| | - Walter A Palacios
- Universidad Técnica del Norte and Herbario Nacional del Ecuador, Casilla 17-21-1787, Av. Río Coca E6-115, Quito, Ecuador
| | | | - John J Pipoly
- Broward County Parks and Recreation Division, 950 NW 38th St., Oakland Park, FL 33309, USA
| | - Nigel C A Pitman
- Center for Tropical Conservation, Duke University, PO Box 90381, Durham, NC 27708, USA
| | - Adriana Prieto
- Doctorado Instituto de Ciencias Naturales, Universidad ciol de Colombia, Colombia
| | - Carlos A Quesada
- INPA, Av. André Araújo, 2.936 - Petrópolis - 69.067-375, Manaus, Amazonas, Brazil
| | - Hirma Ramirez-Angulo
- Instituto de Investigaciones para el Desarrollo Forestal (INDEFOR), Facultad de Ciencias Forestales y Ambientales, Universidad de Los Andes, Conjunto Forestal, C.P. 5101, Mérida, Venezuela
| | - Agustin Rudas
- Doctorado Instituto de Ciencias Naturales, Universidad ciol de Colombia, Colombia
| | - Kalle Ruokolainen
- Department of Geography and Geology, University of Turku, 20014 Turku, Finland
| | - Rafael P Salomão
- Museu Paraense Emilio Goeldi, C.P. 399, 66.040-170, Belém, Pará, Brazil
| | - Marcos Silveira
- Museu Universitário, Universidade Federal do Acre, Rio Branco, AC 69910-900, Brazil
| | - Juliana Stropp
- Institute of Biological and Health Sciences (ICBS), Federal University of Alagoas, Maceió, AL, Brazil
| | - Hans Ter Steege
- Naturalis Biodiversity Center, Vondellaan 55, Postbus 9517, Leiden 2300 RA, The Netherlands
| | - Raquel Thomas-Caesar
- Iwokrama Intertiol Centre for Rainforest Conservation and Development, 77 High Street Kingston, Georgetown, Guyana
| | - Peter van der Hout
- Van der Hout Forestry Consulting, Jan Trooststraat 6, Rotterdam 3078 HP, The Netherlands
| | | | - Peter J van der Meer
- Van Hall Larenstein University of Applied Sciences, PO Box 9001, 6880 GB Velp, The Netherlands
| | - Rodolfo V Vasquez
- Jardín Botánico de Missouri, Prolongacion Bolognesi Mz. E, Lote 6, Oxapampa, Pasco, Peru
| | - Simone A Vieira
- Universidade Estadual de Campinas, Núcleo de Estudos e Pesquisas Ambientais - NEPAM, Campinas, São Paulo, Brazil
| | - Emilio Vilanova
- Facultad de Ciencias Forestales y Ambientales, Universidad de Los Andes, Mérida, Venezuela
| | - Vincent A Vos
- Centro de Investigación y Promoción del Campesinado - regional Norte Amazónico, C/ Nicanor Gonzalo Salvatierra N° 362, Casilla 16, Riberalta, Bolivia.,Universidad Autónoma del Beni, Campus Universitario, Riberalta, Bolivia
| | - Ophelia Wang
- Northern Arizona University, Flagstaff, AZ 86011, USA
| | - Kenneth R Young
- Department of Geography and the Environment, University of Texas at Austin, Austin, TX 78712, USA
| | - Roderick J Zagt
- Tropenbos International, PO Box 232, Wageningen 6700 AE, The Netherlands
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Fukami T, Nakajima M, Fortunel C, Fine PVA, Baraloto C, Russo SE, Peay KG. Geographical Variation in Community Divergence: Insights from Tropical Forest Monodominance by Ectomycorrhizal Trees. Am Nat 2017; 190:S105-S122. [DOI: 10.1086/692439] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Grau O, Peñuelas J, Ferry B, Freycon V, Blanc L, Desprez M, Baraloto C, Chave J, Descroix L, Dourdain A, Guitet S, Janssens IA, Sardans J, Hérault B. Nutrient-cycling mechanisms other than the direct absorption from soil may control forest structure and dynamics in poor Amazonian soils. Sci Rep 2017; 7:45017. [PMID: 28332608 PMCID: PMC5362906 DOI: 10.1038/srep45017] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Accepted: 02/20/2017] [Indexed: 11/30/2022] Open
Abstract
Tropical forests store large amounts of biomass despite they generally grow in nutrient-poor soils, suggesting that the role of soil characteristics in the structure and dynamics of tropical forests is complex. We used data for >34 000 trees from several permanent plots in French Guiana to investigate if soil characteristics could predict the structure (tree diameter, density and aboveground biomass), and dynamics (growth, mortality, aboveground wood productivity) of nutrient-poor tropical forests. Most variables did not covary with site-level changes in soil nutrient content, indicating that nutrient-cycling mechanisms other than the direct absorption from soil (e.g. the nutrient uptake from litter, the resorption, or the storage of nutrients in the biomass), may strongly control forest structure and dynamics. Ecosystem-level adaptations to low soil nutrient availability and long-term low levels of disturbance may help to account for the lower productivity and higher accumulation of biomass in nutrient-poor forests compared to nutrient-richer forests.
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Affiliation(s)
- Oriol Grau
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, 08193, Cerdanyola del Vallès, Catalonia, Spain
- CREAF, 08193, Cerdanyola del Vallès, Catalonia, Spain
| | - Josep Peñuelas
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, 08193, Cerdanyola del Vallès, Catalonia, Spain
- CREAF, 08193, Cerdanyola del Vallès, Catalonia, Spain
| | - Bruno Ferry
- AgroParisTech, ENGREF, UMR, 54000, Nancy, France
| | | | - Lilian Blanc
- CIRAD, UR Forêts et sociétés, 34398, Montpellier, France
| | - Mathilde Desprez
- CIRAD, UMR Ecologie des Forêts de Guyane, 97387, Kourou, French Guiana, France
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, 11200, Miami, USA
| | - Jérôme Chave
- CNRS, Laboratoire Evolution et Diversité Biologique, 31062, Toulouse, France
| | - Laurent Descroix
- ONF Guyane, Réserve de Montabo, 97307, Cayenne, French Guiana, France
| | - Aurélie Dourdain
- CIRAD, UMR Ecologie des Forêts de Guyane, 97387, Kourou, French Guiana, France
| | | | - Ivan A. Janssens
- University of Antwerp, Department of Biology, 2610, Wilrijk, Belgium
| | - Jordi Sardans
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, 08193, Cerdanyola del Vallès, Catalonia, Spain
- CREAF, 08193, Cerdanyola del Vallès, Catalonia, Spain
| | - Bruno Hérault
- CIRAD, UMR Ecologie des Forêts de Guyane, 97387, Kourou, French Guiana, France
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Levis C, Costa FRC, Bongers F, Peña-Claros M, Clement CR, Junqueira AB, Neves EG, Tamanaha EK, Figueiredo FOG, Salomão RP, Castilho CV, Magnusson WE, Phillips OL, Guevara JE, Sabatier D, Molino JF, López DC, Mendoza AM, Pitman NCA, Duque A, Vargas PN, Zartman CE, Vasquez R, Andrade A, Camargo JL, Feldpausch TR, Laurance SGW, Laurance WF, Killeen TJ, Nascimento HEM, Montero JC, Mostacedo B, Amaral IL, Guimarães Vieira IC, Brienen R, Castellanos H, Terborgh J, Carim MDJV, Guimarães JRDS, Coelho LDS, Matos FDDA, Wittmann F, Mogollón HF, Damasco G, Dávila N, García-Villacorta R, Coronado ENH, Emilio T, Filho DDAL, Schietti J, Souza P, Targhetta N, Comiskey JA, Marimon BS, Marimon BH, Neill D, Alonso A, Arroyo L, Carvalho FA, de Souza FC, Dallmeier F, Pansonato MP, Duivenvoorden JF, Fine PVA, Stevenson PR, Araujo-Murakami A, Aymard C. GA, Baraloto C, do Amaral DD, Engel J, Henkel TW, Maas P, Petronelli P, Revilla JDC, Stropp J, Daly D, Gribel R, Paredes MR, Silveira M, Thomas-Caesar R, Baker TR, da Silva NF, Ferreira LV, Peres CA, Silman MR, Cerón C, Valverde FC, Di Fiore A, Jimenez EM, Mora MCP, Toledo M, Barbosa EM, Bonates LCDM, Arboleda NC, Farias EDS, Fuentes A, Guillaumet JL, Jørgensen PM, Malhi Y, de Andrade Miranda IP, Phillips JF, Prieto A, Rudas A, Ruschel AR, Silva N, von Hildebrand P, Vos VA, Zent EL, Zent S, Cintra BBL, Nascimento MT, Oliveira AA, Ramirez-Angulo H, Ramos JF, Rivas G, Schöngart J, Sierra R, Tirado M, van der Heijden G, Torre EV, Wang O, Young KR, Baider C, Cano A, Farfan-Rios W, Ferreira C, Hoffman B, Mendoza C, Mesones I, Torres-Lezama A, Medina MNU, van Andel TR, Villarroel D, Zagt R, Alexiades MN, Balslev H, Garcia-Cabrera K, Gonzales T, Hernandez L, Huamantupa-Chuquimaco I, Manzatto AG, Milliken W, Cuenca WP, Pansini S, Pauletto D, Arevalo FR, Reis NFC, Sampaio AF, Giraldo LEU, Sandoval EHV, Gamarra LV, Vela CIA, ter Steege H. Persistent effects of pre-Columbian plant domestication on Amazonian forest composition. Science 2017; 355:925-931. [DOI: 10.1126/science.aal0157] [Citation(s) in RCA: 306] [Impact Index Per Article: 43.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2016] [Accepted: 01/20/2017] [Indexed: 11/02/2022]
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Bastias CC, Fortunel C, Valladares F, Baraloto C, Benavides R, Cornwell W, Markesteijn L, de Oliveira AA, Sansevero JBB, Vaz MC, Kraft NJB. Intraspecific leaf trait variability along a boreal-to-tropical community diversity gradient. PLoS One 2017; 12:e0172495. [PMID: 28241033 PMCID: PMC5328268 DOI: 10.1371/journal.pone.0172495] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2016] [Accepted: 02/06/2017] [Indexed: 11/28/2022] Open
Abstract
Disentangling the mechanisms that shape community assembly across diversity gradients is a central matter in ecology. While many studies have explored community assembly through species average trait values, there is a growing understanding that intraspecific trait variation (ITV) can also play a critical role in species coexistence. Classic biodiversity theory hypothesizes that higher diversity at species-rich sites can arise from narrower niches relative to species-poor sites, which would be reflected in reduced ITV as species richness increases. To explore how ITV in woody plant communities changes with species richness, we compiled leaf trait data (leaf size and specific leaf area) in a total of 521 woody plant species from 21 forest communities that differed dramatically in species richness, ranging from boreal to tropical rainforests. At each forest, we assessed ITV as an estimate of species niche breadth and we quantified the degree of trait overlap among co-occurring species as a measure of species functional similarity. We found ITV was relatively invariant across the species richness gradient. In addition, we found that species functional similarity increased with diversity. Contrary to the expectation from classic biodiversity theory, our results rather suggest that neutral processes or equalizing mechanisms can be acting as potential drivers shaping community assembly in hyperdiverse forests.
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Affiliation(s)
- Cristina C. Bastias
- Departamento de Biogeografía y Cambio Global. Museo Nacional de Ciencias Naturales- CSIC, Madrid, Spain
| | - Claire Fortunel
- Department of Biology. University of Maryland, College Park, MD, United States of America
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, United States of America
| | - Fernando Valladares
- Departamento de Biogeografía y Cambio Global. Museo Nacional de Ciencias Naturales- CSIC, Madrid, Spain
- Área de Biodiversidad y Conservación, Universidad Rey Juan Carlos, Móstoles, Madrid, Spain
| | | | - Raquel Benavides
- Departamento de Biogeografía y Cambio Global. Museo Nacional de Ciencias Naturales- CSIC, Madrid, Spain
- Institut für Biologie, Geobotanik, Albert-Ludwigs-Universität Freiburg, Freiburg, Germany
| | - William Cornwell
- Evolution & Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia
| | - Lars Markesteijn
- Smithsonian Tropical Research Institute, Balboa, Ancón, Panamá
- Department of Zoology, University of Oxford, South Parks Road, Oxford, United Kingdom
- School of Environment, Natural Resources and Geography, Bangor University, Bangor LL57 2DG, United Kingdom
| | | | - Jeronimo B. B. Sansevero
- Instituto de Pesquisas Jardim Botânico do Rio de Janeiro, Jardim Botânico, Rio de Janeiro, Brazil
- Universidade Federal Rural do Rio de Janeiro–UFRRJ. Departamento de Ciencias Ambientais–DCA. Instituto de Florestas–, Seropédica, Rio de Janeiro, Brazil
| | - Marcel C. Vaz
- Department of Biology. University of Maryland, College Park, MD, United States of America
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, United States of America
| | - Nathan J. B. Kraft
- Department of Biology. University of Maryland, College Park, MD, United States of America
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, United States of America
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Baker TR, Pennington RT, Dexter KG, Fine PVA, Fortune-Hopkins H, Honorio EN, Huamantupa-Chuquimaco I, Klitgård BB, Lewis GP, de Lima HC, Ashton P, Baraloto C, Davies S, Donoghue MJ, Kaye M, Kress WJ, Lehmann CER, Monteagudo A, Phillips OL, Vasquez R. Maximising Synergy among Tropical Plant Systematists, Ecologists, and Evolutionary Biologists. Trends Ecol Evol 2017; 32:258-267. [PMID: 28214038 DOI: 10.1016/j.tree.2017.01.007] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2016] [Revised: 01/19/2017] [Accepted: 01/20/2017] [Indexed: 11/26/2022]
Abstract
Closer collaboration among ecologists, systematists, and evolutionary biologists working in tropical forests, centred on studies within long-term permanent plots, would be highly beneficial for their respective fields. With a key unifying theme of the importance of vouchered collection and precise identification of species, especially rare ones, we identify four priority areas where improving links between these communities could achieve significant progress in biodiversity and conservation science: (i) increasing the pace of species discovery; (ii) documenting species turnover across space and time; (iii) improving models of ecosystem change; and (iv) understanding the evolutionary assembly of communities and biomes.
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Affiliation(s)
| | | | - Kyle G Dexter
- Royal Botanic Garden Edinburgh, Edinburgh, UK; School of GeoSciences, University of Edinburgh, Edinburgh, UK
| | - Paul V A Fine
- Department of Integrative Biology and University and Jepson Herbaria, University of California, Berkeley, CA, USA
| | | | | | - Isau Huamantupa-Chuquimaco
- Programa de Pós-Graduação em Botânica, Escola Nacional de Botânica Tropical, Instituto de Pesquisas Jardim Botânico de Rio de Janeiro (ENBT/JBRJ). Rua Pacheco Leão, 2040. RJ, Brazil
| | - Bente B Klitgård
- Department for Identification and Naming, Royal Botanic Gardens, Kew, UK
| | - Gwilym P Lewis
- Department for Comparative Plant and Fungal Biology, Royal Botanic Gardens, Kew, UK
| | - Haroldo C de Lima
- Programa de Pós-Graduação em Botânica, Escola Nacional de Botânica Tropical, Instituto de Pesquisas Jardim Botânico de Rio de Janeiro (ENBT/JBRJ). Rua Pacheco Leão, 2040. RJ, Brazil
| | | | - Christopher Baraloto
- International Center for Tropical Botany, Florida International University, Miami, USA
| | - Stuart Davies
- Center for Tropical Forest Science - Forest Global Earth Observatory, Smithsonian Tropical Research Institute, Washington, DC, USA; National Museum of Natural History, Smithsonian Institution, Washington, DC, USA
| | - Michael J Donoghue
- Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT, USA
| | - Maria Kaye
- School of Biological Sciences, University of Aberdeen, Aberdeen, UK
| | - W John Kress
- National Museum of Natural History, Smithsonian Institution, Washington, DC, USA
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38
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Leitão RP, Zuanon J, Villéger S, Williams SE, Baraloto C, Fortunel C, Mendonça FP, Mouillot D. Rare species contribute disproportionately to the functional structure of species assemblages. Proc Biol Sci 2016; 283:rspb.2016.0084. [PMID: 27053754 DOI: 10.1098/rspb.2016.0084] [Citation(s) in RCA: 139] [Impact Index Per Article: 17.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2016] [Accepted: 03/11/2016] [Indexed: 11/12/2022] Open
Abstract
There is broad consensus that the diversity of functional traits within species assemblages drives several ecological processes. It is also widely recognized that rare species are the first to become extinct following human-induced disturbances. Surprisingly, however, the functional importance of rare species is still poorly understood, particularly in tropical species-rich assemblages where the majority of species are rare, and the rate of species extinction can be high. Here, we investigated the consequences of local and regional extinctions on the functional structure of species assemblages. We used three extensive datasets (stream fish from the Brazilian Amazon, rainforest trees from French Guiana, and birds from the Australian Wet Tropics) and built an integrative measure of species rarity versus commonness, combining local abundance, geographical range, and habitat breadth. Using different scenarios of species loss, we found a disproportionate impact of rare species extinction for the three groups, with significant reductions in levels of functional richness, specialization, and originality of assemblages, which may severely undermine the integrity of ecological processes. The whole breadth of functional abilities within species assemblages, which is disproportionately supported by rare species, is certainly critical in maintaining ecosystems particularly under the ongoing rapid environmental transitions.
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Affiliation(s)
- Rafael P Leitão
- PPG Biologia de Água Doce e Pesca Interior, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil Coordenação de Biodiversidade, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil Laboratoire Biodiversité Marine et ses Usages, MARBEC, Université de Montpellier, Montpellier, France
| | - Jansen Zuanon
- Coordenação de Biodiversidade, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil
| | - Sébastien Villéger
- Laboratoire Biodiversité Marine et ses Usages, MARBEC, Université de Montpellier, Montpellier, France
| | - Stephen E Williams
- Centre for Tropical Biodiversity and Climate Change, James Cook University, Townsville, Australia
| | - Christopher Baraloto
- INRA, UMR Ecologie des Forêts de Guyane, INRA, Kourou, French Guiana International Center for Tropical Botany, Department of Biol Sci, FIU, Miami, USA
| | - Claire Fortunel
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Fernando P Mendonça
- Instituto Federal de Educação, Ciência e Tecnologia, Presidente Figueiredo, Brazil
| | - David Mouillot
- Laboratoire Biodiversité Marine et ses Usages, MARBEC, Université de Montpellier, Montpellier, France Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Australia
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39
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Piponiot C, Sist P, Mazzei L, Peña-Claros M, Putz FE, Rutishauser E, Shenkin A, Ascarrunz N, de Azevedo CP, Baraloto C, França M, Guedes M, Honorio Coronado EN, d'Oliveira MVN, Ruschel AR, da Silva KE, Doff Sotta E, de Souza CR, Vidal E, West TAP, Hérault B. Carbon recovery dynamics following disturbance by selective logging in Amazonian forests. eLife 2016; 5:e21394. [PMID: 27993185 PMCID: PMC5217754 DOI: 10.7554/elife.21394] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2016] [Accepted: 12/08/2016] [Indexed: 11/27/2022] Open
Abstract
When 2 Mha of Amazonian forests are disturbed by selective logging each year, more than 90 Tg of carbon (C) is emitted to the atmosphere. Emissions are then counterbalanced by forest regrowth. With an original modelling approach, calibrated on a network of 133 permanent forest plots (175 ha total) across Amazonia, we link regional differences in climate, soil and initial biomass with survivors' and recruits' C fluxes to provide Amazon-wide predictions of post-logging C recovery. We show that net aboveground C recovery over 10 years is higher in the Guiana Shield and in the west (21 ±3 Mg C ha-1) than in the south (12 ±3 Mg C ha-1) where environmental stress is high (low rainfall, high seasonality). We highlight the key role of survivors in the forest regrowth and elaborate a comprehensive map of post-disturbance C recovery potential in Amazonia.
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Affiliation(s)
- Camille Piponiot
- Université de Guyane, UMR EcoFoG (Agroparistech, CNRS, Inra, Université des Antilles, Cirad), Kourou, French Guiana
- Cirad, UMR EcoFoG (Agroparistech, CNRS, Inra, Université des Antilles, Université de Guyane), Kourou, French Guiana
- CNRS, UMR EcoFoG (Agroparistech, Inra, Université des Antilles, Université de Guyane, Cirad), Kourou, French Guiana
- Cirad, UR Forests and Societies, Montpellier, France
| | - Plinio Sist
- Cirad, UR Forests and Societies, Montpellier, France
| | | | - Marielos Peña-Claros
- Forest Ecology and Forest Management Group, Wageningen University, Wageningen, Netherlands
| | - Francis E Putz
- Department of Biology, University of Florida, Gainesville, United States
| | | | - Alexander Shenkin
- Environmental Change Institute, University of Oxford, Oxford, United Kingdom
| | - Nataly Ascarrunz
- Instituto Boliviano de Investigación Forestal, Santa Cruz, Bolivia
| | | | - Christopher Baraloto
- Department of Biological Sciences, International Center for Tropical Botany, Florida International University, Miami, United States
| | | | | | | | | | | | | | | | | | - Edson Vidal
- Departamento de Ciências Florestais, University of São Paulo, Piracicaba, Brazil
| | - Thales AP West
- Department of Biology, University of Florida, Gainesville, United States
| | - Bruno Hérault
- Cirad, UMR EcoFoG (Agroparistech, CNRS, Inra, Université des Antilles, Université de Guyane), Kourou, French Guiana
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40
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Johnson MO, Galbraith D, Gloor M, De Deurwaerder H, Guimberteau M, Rammig A, Thonicke K, Verbeeck H, von Randow C, Monteagudo A, Phillips OL, Brienen RJW, Feldpausch TR, Lopez Gonzalez G, Fauset S, Quesada CA, Christoffersen B, Ciais P, Sampaio G, Kruijt B, Meir P, Moorcroft P, Zhang K, Alvarez‐Davila E, Alves de Oliveira A, Amaral I, Andrade A, Aragao LEOC, Araujo‐Murakami A, Arets EJMM, Arroyo L, Aymard GA, Baraloto C, Barroso J, Bonal D, Boot R, Camargo J, Chave J, Cogollo A, Cornejo Valverde F, Lola da Costa AC, Di Fiore A, Ferreira L, Higuchi N, Honorio EN, Killeen TJ, Laurance SG, Laurance WF, Licona J, Lovejoy T, Malhi Y, Marimon B, Marimon BH, Matos DCL, Mendoza C, Neill DA, Pardo G, Peña‐Claros M, Pitman NCA, Poorter L, Prieto A, Ramirez‐Angulo H, Roopsind A, Rudas A, Salomao RP, Silveira M, Stropp J, ter Steege H, Terborgh J, Thomas R, Toledo M, Torres‐Lezama A, van der Heijden GMF, Vasquez R, Guimarães Vieira IC, Vilanova E, Vos VA, Baker TR. Variation in stem mortality rates determines patterns of above-ground biomass in Amazonian forests: implications for dynamic global vegetation models. Glob Chang Biol 2016; 22:3996-4013. [PMID: 27082541 PMCID: PMC6849555 DOI: 10.1111/gcb.13315] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2015] [Revised: 02/05/2016] [Accepted: 03/01/2016] [Indexed: 05/05/2023]
Abstract
Understanding the processes that determine above-ground biomass (AGB) in Amazonian forests is important for predicting the sensitivity of these ecosystems to environmental change and for designing and evaluating dynamic global vegetation models (DGVMs). AGB is determined by inputs from woody productivity [woody net primary productivity (NPP)] and the rate at which carbon is lost through tree mortality. Here, we test whether two direct metrics of tree mortality (the absolute rate of woody biomass loss and the rate of stem mortality) and/or woody NPP, control variation in AGB among 167 plots in intact forest across Amazonia. We then compare these relationships and the observed variation in AGB and woody NPP with the predictions of four DGVMs. The observations show that stem mortality rates, rather than absolute rates of woody biomass loss, are the most important predictor of AGB, which is consistent with the importance of stand size structure for determining spatial variation in AGB. The relationship between stem mortality rates and AGB varies among different regions of Amazonia, indicating that variation in wood density and height/diameter relationships also influences AGB. In contrast to previous findings, we find that woody NPP is not correlated with stem mortality rates and is weakly positively correlated with AGB. Across the four models, basin-wide average AGB is similar to the mean of the observations. However, the models consistently overestimate woody NPP and poorly represent the spatial patterns of both AGB and woody NPP estimated using plot data. In marked contrast to the observations, DGVMs typically show strong positive relationships between woody NPP and AGB. Resolving these differences will require incorporating forest size structure, mechanistic models of stem mortality and variation in functional composition in DGVMs.
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Affiliation(s)
| | | | - Manuel Gloor
- School of GeographyUniversity of LeedsLeedsLS6 2QTUK
| | - Hannes De Deurwaerder
- CAVElab Computational & Applied Vegetation EcologyFaculty of Bioscience EngineeringGhent UniversityCoupure Links 653B‐9000GentBelgium
| | - Matthieu Guimberteau
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA‐CNRS‐UVSQUniversité Paris‐SaclayF‐91191Gif‐sur‐YvetteFrance
- UMR 7619 METISIPSL, Sorbonne Universités, UPMC, CNRS, EPHE75252ParisFrance
| | - Anja Rammig
- TUM School of Life Sciences WeihenstephanTechnical University MunichHans‐Carl‐von‐Carlowitz‐Platz 285354FreisingGermany
- Potsdam Institute for Climate Impact Research (PIK)Telegrafenberg A62PO Box 60 12 03D‐14412PotsdamGermany
| | - Kirsten Thonicke
- Potsdam Institute for Climate Impact Research (PIK)Telegrafenberg A62PO Box 60 12 03D‐14412PotsdamGermany
| | - Hans Verbeeck
- CAVElab Computational & Applied Vegetation EcologyFaculty of Bioscience EngineeringGhent UniversityCoupure Links 653B‐9000GentBelgium
| | - Celso von Randow
- INPEAv. Dos Astronautas, 1.758, Jd. GranjaCEP: 12227‐010Sao Jose dos CamposSPBrazil
| | - Abel Monteagudo
- Jardín Botánico de MissouriProlongacion Bolognesi Mz.e, Lote 6Oxapampa, PascoPeru
| | | | | | - Ted R. Feldpausch
- GeographyCollege of Life and Environmental SciencesUniversity of ExeterRennes DriveExeterEX4 4RJUK
| | | | - Sophie Fauset
- School of GeographyUniversity of LeedsLeedsLS6 2QTUK
| | | | - Bradley Christoffersen
- School of GeosciencesUniversity of EdinburghEdinburghEH9 3FFUK
- Earth and Environmental Sciences DivisionLos Alamos National LaboratoryPO Box 1663Los AlamosNM 87545USA
| | - Philippe Ciais
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA‐CNRS‐UVSQUniversité Paris‐SaclayF‐91191Gif‐sur‐YvetteFrance
| | - Gilvan Sampaio
- INPEAv. Dos Astronautas, 1.758, Jd. GranjaCEP: 12227‐010Sao Jose dos CamposSPBrazil
| | - Bart Kruijt
- ALTERRAWageningen‐URPO Box 476700 AAWageningenThe Netherlands
| | - Patrick Meir
- School of GeosciencesUniversity of EdinburghEdinburghEH9 3FFUK
- Research School of BiologyAustralian National UniversityCanberraACT0200Australia
| | - Paul Moorcroft
- Department of Organismic and Evolutionary BiologyHarvard University26 Oxford StreetCambridgeMA 02138USA
| | - Ke Zhang
- Cooperative Institute for Mesoscale Meteorological StudiesUniversity of Oklahoma National Weather Center Suite 2100120 David L. Boren BlvdNormanOK73072USA
| | | | | | - Ieda Amaral
- INPAAv. André Araújo, 2.936CEP 69067‐375Petrópolis, ManausAMBrazil
| | - Ana Andrade
- INPAAv. André Araújo, 2.936CEP 69067‐375Petrópolis, ManausAMBrazil
| | - Luiz E. O. C. Aragao
- Jardín Botánico de MissouriProlongacion Bolognesi Mz.e, Lote 6Oxapampa, PascoPeru
| | - Alejandro Araujo‐Murakami
- Museo de Historia Natural Noel Kempff MercadoUniversidad Autonoma Gabriel Rene MorenoCasilla 2489, Av. Irala 565Santa CruzBolivia
| | | | - Luzmila Arroyo
- Museo de Historia Natural Noel Kempff MercadoUniversidad Autonoma Gabriel Rene MorenoCasilla 2489, Av. Irala 565Santa CruzBolivia
| | - Gerardo A. Aymard
- UNELLEZ‐Guanare, Programa de Ciencias del Agro y el Mar, Herbario Universitario (PORT)Mesa de CavacasEstado Portuguesa3350Venezuela
| | - Christopher Baraloto
- Department of Biological SciencesInternational Center for Tropical Botany (ICTB)Florida International University112200 SW 8th Street, OE 167MiamiFL33199USA
| | - Jocely Barroso
- Universidade Federal do AcreCampus de Cruzeiro do SulRio BrancoBrazil
| | - Damien Bonal
- INRAUMR 1137 “Ecologie et Ecophysiologie Forestiere”54280ChampenouxFrance
| | - Rene Boot
- Tropenbos InternationalPO Box 2326700 AEWageningenThe Netherlands
| | - Jose Camargo
- INPAAv. André Araújo, 2.936CEP 69067‐375Petrópolis, ManausAMBrazil
| | - Jerome Chave
- Université Paul Sabatier CNRSUMR 5174 Evolution et Diversité Biologiquebâtiment 4R131062ToulouseFrance
| | - Alvaro Cogollo
- Jardín Botánico de Medellín Joaquín Antonio Uribe Calle 73 # 51 D 14 MedellínCartagenaColombia
| | | | | | - Anthony Di Fiore
- Department of AnthropologyUniversity of Texas at AustinSAC Room 5.1502201 Speedway Stop C3200AustinTX78712USA
| | - Leandro Ferreira
- Museu Paraense Emilio GoeldiAv. Magalhães Barata, 376 ‐ São BrazCEP: 66040‐170BelémPABrazil
| | - Niro Higuchi
- INPAAv. André Araújo, 2.936CEP 69067‐375Petrópolis, ManausAMBrazil
| | - Euridice N. Honorio
- Instituto de Investigaciones de la Amazonía PeruanaAv. José Quiñones km 2.5IquitosPerú
| | | | - Susan G. Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental SciencesJames Cook UniversityCairnsQld4878Australia
| | - William F. Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental SciencesJames Cook UniversityCairnsQld4878Australia
| | - Juan Licona
- Instituto Boliviano de Investigación ForestalC.P. 6201Santa Cruz de la SierraBolivia
| | - Thomas Lovejoy
- Environmental Science and Policy Department and the Department of Public and International Affairs at George Mason University (GMU)3351 Fairfax DriveArlingtonWashingtonDCVA 22201USA
| | - Yadvinder Malhi
- Environmental Change InstituteSchool of Geography and the EnvironmentUniversity of OxfordSouth Parks RoadOxfordOX1 3QYUK
| | - Bia Marimon
- Universidade do Estado de Mato GrossoCampus de Nova XavantinaCaixa Postal 08CEP 78.690‐000Nova XavantinaMTBrazil
| | - Ben Hur Marimon
- Universidade do Estado de Mato GrossoCampus de Nova XavantinaCaixa Postal 08CEP 78.690‐000Nova XavantinaMTBrazil
| | - Darley C. L. Matos
- Museu Paraense Emilio GoeldiAv. Magalhães Barata, 376 ‐ São BrazCEP: 66040‐170BelémPABrazil
| | - Casimiro Mendoza
- Escuela de Ciencias Forestales (ESFOR)Av. Final Atahuallpa s/nCasilla 447CochabambaBolivia
| | - David A. Neill
- Facultad de Ingeniería AmbientalUniversidad Estatal AmazónicaPaso lateral km 2 1/2 via NapoPuyoPastazaEcuador
| | - Guido Pardo
- Universidad Autonoma del BeniCampus UniversitarioAv. Ejército Nacional, finalRiberaltaBeniBolivia
| | - Marielos Peña‐Claros
- Instituto Boliviano de Investigación ForestalC.P. 6201Santa Cruz de la SierraBolivia
- Forest Ecology and Forest Management GroupWageningen UniversityPO Box 47Wageningen6700 AAThe Netherlands
| | - Nigel C. A. Pitman
- Center for Tropical ConservationDuke UniversityBox 90381DurhamNC27708USA
| | - Lourens Poorter
- Forest Ecology and Forest Management GroupWageningen UniversityPO Box 47Wageningen6700 AAThe Netherlands
| | - Adriana Prieto
- Doctorado Instituto de Ciencias NaturalesUniversidad Nacional de ColombiaBogotáColombia
| | - Hirma Ramirez‐Angulo
- Instituto de Investigaciones para el Desarrollo ForestalUniversidad de Los AndesAvenida Principal Chorros de MillaCampus Universitario ForestalEdificio PrincipalMéridaVenezuela
| | - Anand Roopsind
- Iwokrama International Centre for Rainforest Conservation and Development77 High Street KingstonGeorgetownGuyana
| | - Agustin Rudas
- Doctorado Instituto de Ciencias NaturalesUniversidad Nacional de ColombiaBogotáColombia
| | - Rafael P. Salomao
- Museu Paraense Emilio GoeldiAv. Magalhães Barata, 376 ‐ São BrazCEP: 66040‐170BelémPABrazil
| | - Marcos Silveira
- Museu UniversitárioUniversidade Federal do AcreRio BrancoAC69910‐900Brazil
| | - Juliana Stropp
- Institute of Biological and Health SciencesFederal University of AlagoasAv. Lourival Melo Mota s/nTabuleiro do Martins, MaceióAL 57072‐900Brazil
| | - Hans ter Steege
- Naturalis Biodiversity CenterPO Box 95172300 RALeidenThe Netherlands
| | - John Terborgh
- Center for Tropical ConservationDuke UniversityBox 90381DurhamNC27708USA
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development77 High Street KingstonGeorgetownGuyana
| | - Marisol Toledo
- Instituto Boliviano de Investigación ForestalC.P. 6201Santa Cruz de la SierraBolivia
| | - Armando Torres‐Lezama
- Instituto de Investigaciones para el Desarrollo ForestalUniversidad de Los AndesAvenida Principal Chorros de MillaCampus Universitario ForestalEdificio PrincipalMéridaVenezuela
| | | | - Rodolfo Vasquez
- GeographyCollege of Life and Environmental SciencesUniversity of ExeterRennes DriveExeterEX4 4RJUK
| | | | - Emilio Vilanova
- Instituto de Investigaciones para el Desarrollo ForestalUniversidad de Los AndesAvenida Principal Chorros de MillaCampus Universitario ForestalEdificio PrincipalMéridaVenezuela
| | - Vincent A. Vos
- Centro de Investigación y Promoción del Campesinado, regional Norte AmazónicoC/Nicanor Gonzalo Salvatierra N° 362Casilla 16RiberaltaBolivia
- Universidad Autónoma del BeniAvenida 6 de Agosto N° 64RiberaltaBolivia
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Johnson MO, Galbraith D, Gloor M, De Deurwaerder H, Guimberteau M, Rammig A, Thonicke K, Verbeeck H, von Randow C, Monteagudo A, Phillips OL, Brienen RJW, Feldpausch TR, Lopez Gonzalez G, Fauset S, Quesada CA, Christoffersen B, Ciais P, Sampaio G, Kruijt B, Meir P, Moorcroft P, Zhang K, Alvarez-Davila E, Alves de Oliveira A, Amaral I, Andrade A, Aragao LEOC, Araujo-Murakami A, Arets EJMM, Arroyo L, Aymard GA, Baraloto C, Barroso J, Bonal D, Boot R, Camargo J, Chave J, Cogollo A, Cornejo Valverde F, Lola da Costa AC, Di Fiore A, Ferreira L, Higuchi N, Honorio EN, Killeen TJ, Laurance SG, Laurance WF, Licona J, Lovejoy T, Malhi Y, Marimon B, Marimon BH, Matos DCL, Mendoza C, Neill DA, Pardo G, Peña-Claros M, Pitman NCA, Poorter L, Prieto A, Ramirez-Angulo H, Roopsind A, Rudas A, Salomao RP, Silveira M, Stropp J, Ter Steege H, Terborgh J, Thomas R, Toledo M, Torres-Lezama A, van der Heijden GMF, Vasquez R, Guimarães Vieira IC, Vilanova E, Vos VA, Baker TR. Variation in stem mortality rates determines patterns of above-ground biomass in Amazonian forests: implications for dynamic global vegetation models. Glob Chang Biol 2016. [PMID: 27082541 DOI: 10.5521/forestplots.net/2016_2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Understanding the processes that determine above-ground biomass (AGB) in Amazonian forests is important for predicting the sensitivity of these ecosystems to environmental change and for designing and evaluating dynamic global vegetation models (DGVMs). AGB is determined by inputs from woody productivity [woody net primary productivity (NPP)] and the rate at which carbon is lost through tree mortality. Here, we test whether two direct metrics of tree mortality (the absolute rate of woody biomass loss and the rate of stem mortality) and/or woody NPP, control variation in AGB among 167 plots in intact forest across Amazonia. We then compare these relationships and the observed variation in AGB and woody NPP with the predictions of four DGVMs. The observations show that stem mortality rates, rather than absolute rates of woody biomass loss, are the most important predictor of AGB, which is consistent with the importance of stand size structure for determining spatial variation in AGB. The relationship between stem mortality rates and AGB varies among different regions of Amazonia, indicating that variation in wood density and height/diameter relationships also influences AGB. In contrast to previous findings, we find that woody NPP is not correlated with stem mortality rates and is weakly positively correlated with AGB. Across the four models, basin-wide average AGB is similar to the mean of the observations. However, the models consistently overestimate woody NPP and poorly represent the spatial patterns of both AGB and woody NPP estimated using plot data. In marked contrast to the observations, DGVMs typically show strong positive relationships between woody NPP and AGB. Resolving these differences will require incorporating forest size structure, mechanistic models of stem mortality and variation in functional composition in DGVMs.
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Affiliation(s)
| | - David Galbraith
- School of Geography, University of Leeds, Leeds, LS6 2QT, UK
| | - Manuel Gloor
- School of Geography, University of Leeds, Leeds, LS6 2QT, UK
| | - Hannes De Deurwaerder
- CAVElab Computational & Applied Vegetation Ecology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Gent, Belgium
| | - Matthieu Guimberteau
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, F-91191, Gif-sur-Yvette, France
- UMR 7619 METIS, IPSL, Sorbonne Universités, UPMC, CNRS, EPHE, 75252, Paris, France
| | - Anja Rammig
- TUM School of Life Sciences Weihenstephan, Technical University Munich, Hans-Carl-von-Carlowitz-Platz 2, 85354, Freising, Germany
- Potsdam Institute for Climate Impact Research (PIK), Telegrafenberg A62, PO Box 60 12 03, D-14412, Potsdam, Germany
| | - Kirsten Thonicke
- Potsdam Institute for Climate Impact Research (PIK), Telegrafenberg A62, PO Box 60 12 03, D-14412, Potsdam, Germany
| | - Hans Verbeeck
- CAVElab Computational & Applied Vegetation Ecology, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Gent, Belgium
| | - Celso von Randow
- INPE, Av. Dos Astronautas, 1.758, Jd. Granja, CEP: 12227-010, Sao Jose dos Campos, SP, Brazil
| | - Abel Monteagudo
- Jardín Botánico de Missouri, Prolongacion Bolognesi Mz.e, Lote 6, Oxapampa, Pasco, Peru
| | | | | | - Ted R Feldpausch
- Geography, College of Life and Environmental Sciences, University of Exeter, Rennes Drive, Exeter, EX4 4RJ, UK
| | | | - Sophie Fauset
- School of Geography, University of Leeds, Leeds, LS6 2QT, UK
| | - Carlos A Quesada
- INPA, Av. André Araújo, 2.936, CEP 69067-375, Petrópolis, Manaus, AM, Brazil
| | - Bradley Christoffersen
- School of Geosciences, University of Edinburgh, Edinburgh, EH9 3FF, UK
- Earth and Environmental Sciences Division, Los Alamos National Laboratory, PO Box 1663, Los Alamos, NM, 87545, USA
| | - Philippe Ciais
- Laboratoire des Sciences du Climat et de l'Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, F-91191, Gif-sur-Yvette, France
| | - Gilvan Sampaio
- INPE, Av. Dos Astronautas, 1.758, Jd. Granja, CEP: 12227-010, Sao Jose dos Campos, SP, Brazil
| | - Bart Kruijt
- ALTERRA, Wageningen-UR, PO Box 47, 6700 AA, Wageningen, The Netherlands
| | - Patrick Meir
- School of Geosciences, University of Edinburgh, Edinburgh, EH9 3FF, UK
- Research School of Biology, Australian National University, Canberra, ACT, 0200, Australia
| | - Paul Moorcroft
- Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA, 02138, USA
| | - Ke Zhang
- Cooperative Institute for Mesoscale Meteorological Studies, University of Oklahoma, National Weather Center, Suite 2100, 120 David L. Boren Blvd, Norman, OK, 73072, USA
| | | | | | - Ieda Amaral
- INPA, Av. André Araújo, 2.936, CEP 69067-375, Petrópolis, Manaus, AM, Brazil
| | - Ana Andrade
- INPA, Av. André Araújo, 2.936, CEP 69067-375, Petrópolis, Manaus, AM, Brazil
| | - Luiz E O C Aragao
- Jardín Botánico de Missouri, Prolongacion Bolognesi Mz.e, Lote 6, Oxapampa, Pasco, Peru
| | - Alejandro Araujo-Murakami
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autonoma Gabriel Rene Moreno, Casilla 2489, Av. Irala 565, Santa Cruz, Bolivia
| | - Eric J M M Arets
- ALTERRA, Wageningen-UR, PO Box 47, 6700 AA, Wageningen, The Netherlands
| | - Luzmila Arroyo
- Museo de Historia Natural Noel Kempff Mercado, Universidad Autonoma Gabriel Rene Moreno, Casilla 2489, Av. Irala 565, Santa Cruz, Bolivia
| | - Gerardo A Aymard
- UNELLEZ-Guanare, Programa de Ciencias del Agro y el Mar, Herbario Universitario (PORT), Mesa de Cavacas, Estado Portuguesa, 3350, Venezuela
| | - Christopher Baraloto
- Department of Biological Sciences, International Center for Tropical Botany (ICTB), Florida International University, 112200 SW 8th Street, OE 167, Miami, FL, 33199, USA
| | - Jocely Barroso
- Universidade Federal do Acre, Campus de Cruzeiro do Sul, Rio Branco, Brazil
| | - Damien Bonal
- INRA, UMR 1137 "Ecologie et Ecophysiologie Forestiere", 54280, Champenoux, France
| | - Rene Boot
- Tropenbos International, PO Box 232, 6700 AE, Wageningen, The Netherlands
| | - Jose Camargo
- INPA, Av. André Araújo, 2.936, CEP 69067-375, Petrópolis, Manaus, AM, Brazil
| | - Jerome Chave
- Université Paul Sabatier CNRS, UMR 5174 Evolution et Diversité Biologique, bâtiment 4R1, 31062, Toulouse, France
| | - Alvaro Cogollo
- Jardín Botánico de Medellín Joaquín Antonio Uribe, Calle 73 # 51 D 14 Medellín, Cartagena, Colombia
| | | | | | - Anthony Di Fiore
- Department of Anthropology, University of Texas at Austin, SAC Room 5.150, 2201 Speedway Stop C3200, Austin, TX, 78712, USA
| | - Leandro Ferreira
- Museu Paraense Emilio Goeldi, Av. Magalhães Barata, 376 - São Braz, CEP: 66040-170, Belém, PA, Brazil
| | - Niro Higuchi
- INPA, Av. André Araújo, 2.936, CEP 69067-375, Petrópolis, Manaus, AM, Brazil
| | - Euridice N Honorio
- Instituto de Investigaciones de la Amazonía Peruana, Av. José Quiñones km 2.5, Iquitos, Perú
| | - Tim J Killeen
- World Wildlife Fund, 1250 24th St NW, Washington, DC, 20037, USA
| | - Susan G Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental Sciences, James Cook University, Cairns, Qld, 4878, Australia
| | - William F Laurance
- Centre for Tropical Environmental and Sustainability Science (TESS) and College of Marine and Environmental Sciences, James Cook University, Cairns, Qld, 4878, Australia
| | - Juan Licona
- Instituto Boliviano de Investigación Forestal, C.P. 6201, Santa Cruz de la Sierra, Bolivia
| | - Thomas Lovejoy
- Environmental Science and Policy Department and the Department of Public and International Affairs at George Mason University (GMU), 3351 Fairfax Drive, Arlington, Washington, DC, VA 22201, USA
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, South Parks Road, Oxford, OX1 3QY, UK
| | - Bia Marimon
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, CEP 78.690-000, Nova Xavantina, MT, Brazil
| | - Ben Hur Marimon
- Universidade do Estado de Mato Grosso, Campus de Nova Xavantina, Caixa Postal 08, CEP 78.690-000, Nova Xavantina, MT, Brazil
| | - Darley C L Matos
- Museu Paraense Emilio Goeldi, Av. Magalhães Barata, 376 - São Braz, CEP: 66040-170, Belém, PA, Brazil
| | - Casimiro Mendoza
- Escuela de Ciencias Forestales (ESFOR), Av. Final Atahuallpa s/n, Casilla 447, Cochabamba, Bolivia
| | - David A Neill
- Facultad de Ingeniería Ambiental, Universidad Estatal Amazónica, Paso lateral km 2 1/2 via Napo, Puyo, Pastaza, Ecuador
| | - Guido Pardo
- Universidad Autonoma del Beni, Campus Universitario, Av. Ejército Nacional, final, Riberalta, Beni, Bolivia
| | - Marielos Peña-Claros
- Instituto Boliviano de Investigación Forestal, C.P. 6201, Santa Cruz de la Sierra, Bolivia
- Forest Ecology and Forest Management Group, Wageningen University, PO Box 47, Wageningen, 6700 AA, The Netherlands
| | - Nigel C A Pitman
- Center for Tropical Conservation, Duke University, Box 90381, Durham, NC, 27708, USA
| | - Lourens Poorter
- Forest Ecology and Forest Management Group, Wageningen University, PO Box 47, Wageningen, 6700 AA, The Netherlands
| | - Adriana Prieto
- Doctorado Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Hirma Ramirez-Angulo
- Instituto de Investigaciones para el Desarrollo Forestal, Universidad de Los Andes, Avenida Principal Chorros de Milla, Campus Universitario Forestal, Edificio Principal, Mérida, Venezuela
| | - Anand Roopsind
- Iwokrama International Centre for Rainforest Conservation and Development, 77 High Street Kingston, Georgetown, Guyana
| | - Agustin Rudas
- Doctorado Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia
| | - Rafael P Salomao
- Museu Paraense Emilio Goeldi, Av. Magalhães Barata, 376 - São Braz, CEP: 66040-170, Belém, PA, Brazil
| | - Marcos Silveira
- Museu Universitário, Universidade Federal do Acre, Rio Branco, AC, 69910-900, Brazil
| | - Juliana Stropp
- Institute of Biological and Health Sciences, Federal University of Alagoas, Av. Lourival Melo Mota s/n, Tabuleiro do Martins, Maceió, AL 57072-900, Brazil
| | - Hans Ter Steege
- Naturalis Biodiversity Center, PO Box 9517, 2300 RA, Leiden, The Netherlands
| | - John Terborgh
- Center for Tropical Conservation, Duke University, Box 90381, Durham, NC, 27708, USA
| | - Raquel Thomas
- Iwokrama International Centre for Rainforest Conservation and Development, 77 High Street Kingston, Georgetown, Guyana
| | - Marisol Toledo
- Instituto Boliviano de Investigación Forestal, C.P. 6201, Santa Cruz de la Sierra, Bolivia
| | - Armando Torres-Lezama
- Instituto de Investigaciones para el Desarrollo Forestal, Universidad de Los Andes, Avenida Principal Chorros de Milla, Campus Universitario Forestal, Edificio Principal, Mérida, Venezuela
| | | | - Rodolfo Vasquez
- Geography, College of Life and Environmental Sciences, University of Exeter, Rennes Drive, Exeter, EX4 4RJ, UK
| | | | - Emilio Vilanova
- Instituto de Investigaciones para el Desarrollo Forestal, Universidad de Los Andes, Avenida Principal Chorros de Milla, Campus Universitario Forestal, Edificio Principal, Mérida, Venezuela
| | - Vincent A Vos
- Centro de Investigación y Promoción del Campesinado, regional Norte Amazónico, C/Nicanor Gonzalo Salvatierra N° 362, Casilla 16, Riberalta, Bolivia
- Universidad Autónoma del Beni, Avenida 6 de Agosto N° 64, Riberalta, Bolivia
| | - Timothy R Baker
- School of Geography, University of Leeds, Leeds, LS6 2QT, UK
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Liang J, Crowther TW, Picard N, Wiser S, Zhou M, Alberti G, Schulze ED, McGuire AD, Bozzato F, Pretzsch H, de-Miguel S, Paquette A, Herault B, Scherer-Lorenzen M, Barrett CB, Glick HB, Hengeveld GM, Nabuurs GJ, Pfautsch S, Viana H, Vibrans AC, Ammer C, Schall P, Verbyla D, Tchebakova N, Fischer M, Watson JV, Chen HYH, Lei X, Schelhaas MJ, Lu H, Gianelle D, Parfenova EI, Salas C, Lee E, Lee B, Kim HS, Bruelheide H, Coomes DA, Piotto D, Sunderland T, Schmid B, Gourlet-Fleury S, Sonke B, Tavani R, Zhu J, Brandl S, Vayreda J, Kitahara F, Searle EB, Neldner VJ, Ngugi MR, Baraloto C, Frizzera L, Ba azy R, Oleksyn J, Zawi a-Nied wiecki T, Bouriaud O, Bussotti F, Finer L, Jaroszewicz B, Jucker T, Valladares F, Jagodzinski AM, Peri PL, Gonmadje C, Marthy W, OBrien T, Martin EH, Marshall AR, Rovero F, Bitariho R, Niklaus PA, Alvarez-Loayza P, Chamuya N, Valencia R, Mortier F, Wortel V, Engone-Obiang NL, Ferreira LV, Odeke DE, Vasquez RM, Lewis SL, Reich PB. Positive biodiversity-productivity relationship predominant in global forests. Science 2016; 354:354/6309/aaf8957. [DOI: 10.1126/science.aaf8957] [Citation(s) in RCA: 659] [Impact Index Per Article: 82.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2016] [Accepted: 08/22/2016] [Indexed: 11/02/2022]
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43
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Fortunel C, Paine CET, Fine PVA, Mesones I, Goret J, Burban B, Cazal J, Baraloto C. There's no place like home: seedling mortality contributes to the habitat specialisation of tree species across Amazonia. Ecol Lett 2016; 19:1256-66. [DOI: 10.1111/ele.12661] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Revised: 06/27/2016] [Accepted: 07/16/2016] [Indexed: 02/05/2023]
Affiliation(s)
- Claire Fortunel
- INRA UMR Ecologie des Forêts de Guyane BP 709 97387 Kourou Cedex France
- Department of Biology University of Maryland College Park MD20742 USA
- Department of Ecology and Evolutionary Biology University of California Los Angeles CA90095 USA
| | - C. E. Timothy Paine
- Biological and Environmental Sciences University of Stirling StirlingFK9 4LA UK
| | - Paul V. A. Fine
- Department of Integrative Biology University of California Berkeley CA94720 USA
| | - Italo Mesones
- Department of Integrative Biology University of California Berkeley CA94720 USA
| | - Jean‐Yves Goret
- INRA UMR Ecologie des Forêts de Guyane BP 709 97387 Kourou Cedex France
| | - Benoit Burban
- INRA UMR Ecologie des Forêts de Guyane BP 709 97387 Kourou Cedex France
| | - Jocelyn Cazal
- INRA UMR Ecologie des Forêts de Guyane BP 709 97387 Kourou Cedex France
| | - Christopher Baraloto
- INRA UMR Ecologie des Forêts de Guyane BP 709 97387 Kourou Cedex France
- International Center for Tropical Botany Department of Biological Sciences Florida International University Miami FL33199 USA
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44
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Engel J, Brousseau L, Baraloto C. GuiaTreeKey, a multi-access electronic key to identify tree genera in French Guiana. PhytoKeys 2016; 68:27-44. [PMID: 27698572 PMCID: PMC5029128 DOI: 10.3897/phytokeys.68.8707] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2016] [Accepted: 07/21/2016] [Indexed: 06/06/2023]
Abstract
The tropical rainforest of Amazonia is one of the most species-rich ecosystems on earth, with an estimated 16000 tree species. Due to this high diversity, botanical identification of trees in the Amazon is difficult, even to genus, often requiring the assistance of parataxonomists or taxonomic specialists. Advances in informatics tools offer a promising opportunity to develop user-friendly electronic keys to improve Amazonian tree identification. Here, we introduce an original multi-access electronic key for the identification of 389 tree genera occurring in French Guiana terra-firme forests, based on a set of 79 morphological characters related to vegetative, floral and fruit characters. Its purpose is to help Amazonian tree identification and to support the dissemination of botanical knowledge to non-specialists, including forest workers, students and researchers from other scientific disciplines. The electronic key is accessible with the free access software Xper², and the database is publicly available on figshare: https://figshare.com/s/75d890b7d707e0ffc9bf (doi: 10.6084/m9.figshare.2682550).
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Affiliation(s)
- Julien Engel
- CNRS, UMR AMAP (botAnique et Modélisation de l’Architecture des Plantes et des végétations), Boulevard de la Lironde, TA A-51/PS2, F-34398 Montpellier Cedex 5, France
- CNRS, UMR EcoFoG (Ecologie des Forêts de Guyane), Campus Agronomique, BP 316, F-97379 Kourou cedex, France
| | - Louise Brousseau
- INRA, UMR EcoFoG (Ecologie des Forêts de Guyane), Campus Agronomique, BP 316, F-97379 Kourou cedex, France
- INRA, UR0629 URFM (Ecologie des Forêts Méditerranéennes), Domaine Saint Paul, Site Agroparc CS 40509, 84914 Avignon Cedex 9, France
| | - Christopher Baraloto
- INRA, UMR EcoFoG (Ecologie des Forêts de Guyane), Campus Agronomique, BP 316, F-97379 Kourou cedex, France
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, 11200 SW 8th Street, Miami, FL 33199, USA
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45
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Courtois EA, Dexter KG, Paine CET, Stien D, Engel J, Baraloto C, Chave J. Evolutionary patterns of volatile terpene emissions across 202 tropical tree species. Ecol Evol 2016; 6:2854-64. [PMID: 27069586 PMCID: PMC4803801 DOI: 10.1002/ece3.1810] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Accepted: 10/04/2015] [Indexed: 11/25/2022] Open
Abstract
Plant responses to natural enemies include formation of secondary metabolites acting as direct or indirect defenses. Volatile terpenes represent one of the most diverse groups of secondary metabolites. We aimed to explore evolutionary patterns of volatile terpene emission. We measured the composition of damage‐induced volatile terpenes from 202 Amazonian tree species, spanning the angiosperm phylogeny. Volatile terpenes were extracted with solid‐phase micro extraction and desorbed in a gas chromatography–mass spectrometry for compound identification. The chemical diversity of the terpene blend showed a strong phylogenetic signal as closely related species emitted a similar number of compounds. Closely related species also tended to have compositionally similar blends, although this relationship was weak. Meanwhile, the ability to emit a given compound showed no significant phylogenetic signal for 200 of 286 compounds, indicating a high rate of diversification in terpene synthesis and/or great variability in their expression. Three lineages (Magnoliales, Laurales, and Sapindales) showed exceptionally high rates of terpene diversification. Of the 70 compounds found in >10% of their species, 69 displayed significant correlated evolution with at least one other compound. These results provide insights into the complex evolutionary history of volatile terpenes in angiosperms, while highlighting the need for further research into this important class of compounds.
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Affiliation(s)
- Elodie A Courtois
- CNRS Guyane USR 34562, Avenue Gustave Charlery 97300 Cayenne France; Laboratoire Evolution et Diversité Biologique UMR 5174 CNRS/Université Paul Sabatier 118, route de Narbonne 31062 Toulouse France; CNRS, UMR Ecofog Université Antilles Guyane BP 70997387 Kourou Cedex France
| | - Kyle G Dexter
- Laboratoire Evolution et Diversité Biologique UMR 5174 CNRS/Université Paul Sabatier 118, route de Narbonne 31062 Toulouse France; School of GeoSciences University of Edinburgh Edinburgh EH9 3FFUK; Royal Botanic Garden Edinburgh 20a Inverleith Row Edinburgh EH3 5LR UK
| | | | - Didier Stien
- CNRS, UMR Ecofog Université Antilles Guyane BP 70997387 Kourou Cedex France; Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM) Observatoire Océanologique Sorbonne Universités, UPMC Univ Paris 06, CNRS 66650 Banyuls-sur-mer France
| | - Julien Engel
- INRA UMR Ecofog BP 701 97387 Kourou Cedex France
| | - Christopher Baraloto
- INRAUMR Ecofog BP 70197387 Kourou Cedex France; International Center for Tropical Botany Department of Biological Sciences Florida International University Miami Florida 33199
| | - Jérôme Chave
- Laboratoire Evolution et Diversité Biologique UMR 5174 CNRS/Université Paul Sabatier 118, route de Narbonne 31062 Toulouse France
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46
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Verheyen K, Vanhellemont M, Auge H, Baeten L, Baraloto C, Barsoum N, Bilodeau-Gauthier S, Bruelheide H, Castagneyrol B, Godbold D, Haase J, Hector A, Jactel H, Koricheva J, Loreau M, Mereu S, Messier C, Muys B, Nolet P, Paquette A, Parker J, Perring M, Ponette Q, Potvin C, Reich P, Smith A, Weih M, Scherer-Lorenzen M. Contributions of a global network of tree diversity experiments to sustainable forest plantations. Ambio 2016; 45:29-41. [PMID: 26264716 PMCID: PMC4709352 DOI: 10.1007/s13280-015-0685-1] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2015] [Revised: 06/16/2015] [Accepted: 06/27/2015] [Indexed: 05/07/2023]
Abstract
The area of forest plantations is increasing worldwide helping to meet timber demand and protect natural forests. However, with global change, monospecific plantations are increasingly vulnerable to abiotic and biotic disturbances. As an adaption measure we need to move to plantations that are more diverse in genotypes, species, and structure, with a design underpinned by science. TreeDivNet, a global network of tree diversity experiments, responds to this need by assessing the advantages and disadvantages of mixed species plantations. The network currently consists of 18 experiments, distributed over 36 sites and five ecoregions. With plantations 1-15 years old, TreeDivNet can already provide relevant data for forest policy and management. In this paper, we highlight some early results on the carbon sequestration and pest resistance potential of more diverse plantations. Finally, suggestions are made for new, innovative experiments in understudied regions to complement the existing network.
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Affiliation(s)
- Kris Verheyen
- Forest & Nature Lab, Department of Forest and Water Management, Ghent University, Geraardsbergsesteenweg 267, 9090, Melle-Gontrode, Belgium.
| | - Margot Vanhellemont
- Forest & Nature Lab, Department of Forest and Water Management, Ghent University, Geraardsbergsesteenweg 267, 9090, Melle-Gontrode, Belgium.
| | - Harald Auge
- Department of Community Ecology, Helmholtz Centre for Environmental Research, Theodor-Lieser-Straße 4, 06120, Halle, Germany.
- German Centre for Integrative Biodiversity Research (Halle-Jena-Leipzig), iDiv, Deutscher Platz 5e, 04103, Leipzig, Germany.
| | - Lander Baeten
- Forest & Nature Lab, Department of Forest and Water Management, Ghent University, Geraardsbergsesteenweg 267, 9090, Melle-Gontrode, Belgium.
| | - Christopher Baraloto
- Department of Biological Sciences, International Center for Tropical Botany, Florida International University, 11200 SW 8th Street, OE 167, Miami, FL, 33199, USA.
- INRA, UMR Ecologie des Forêts de Guyane, 97310, Kourou, French Guiana.
- Department of Botany, Instituto Nacional de Pesquisas da Amazônia, Manaus, Brazil.
| | - Nadia Barsoum
- Centre for Ecosystems, Society and Biosecurity, Forest Research, Alice Holt Lodge, Farnham, GU10 4LH, Surrey, UK.
| | - Simon Bilodeau-Gauthier
- Centre for Forest Research (CFR), Université du Québec à Montréal (UQM), P.O. Box 8888, Centre-ville Station, Montréal, QC, H3C 3P8, Canada.
| | - Helge Bruelheide
- Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle Wittenberg, Am Kirchtor 1, 06108, Halle, Germany.
| | - Bastien Castagneyrol
- INRA, UMR 1202 BIOGECO, 69 route d'Arcachon, 33612, Cestas, France.
- INRA, UMR 1202 BIOGECO, 33610, Cestas, France.
- UMR 1202, BIOGECO, University of Bordeaux, 33615, Pessac, France.
| | - Douglas Godbold
- Institute of Forest Ecology, Universität für Bodenkultur (BOKU), Peter Jordan Str 82, 1190, Vienna, Austria.
| | - Josephine Haase
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Austria.
- Faculty of Biology, University of Freiburg, Schaenzlestrasse 1, 79104, Freiburg, Germany.
- Ecosystem Management, Department of Environmental Systems Science, ETH Zurich, Universitaetsstr. 16, 8092, Zurich, Switzerland.
| | - Andy Hector
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK.
| | - Hervé Jactel
- INRA, UMR 1202 BIOGECO, 33610, Cestas, France.
- UMR 1202, BIOGECO, University of Bordeaux, 33615, Pessac, France.
| | - Julia Koricheva
- School of Biological Sciences, Royal Holloway University of London, Egham, TW20 0EX, Surrey, UK.
| | - Michel Loreau
- Centre for Biodiversity Theory and Modelling, Station d'Ecologie Expérimentale du CNRS, 2 route du CNRS, 09200, Moulis, France.
| | - Simone Mereu
- Department of Science for Nature and Natural Resources, University of Sassari, Via Enrico De Nicola 1, 07100, Sassari, Italy.
- Euro-Mediterranean Center on Climate Change (CMCC), Impacts on Agriculture, Forest, and Natural Ecosystems, Lecce, Italy.
| | - Christian Messier
- Centre for Forest Research (CFR), Université du Québec à Montréal (UQM), P.O. Box 8888, Centre-ville Station, Montréal, QC, H3C 3P8, Canada.
- Institut des Sciences de la Forêt tempérée (ISFORT), Université du Québec en Outaouais (UQO), 8, Rue Principale, Ripon, QC, JOV 1V0, Canada.
| | - Bart Muys
- Division Forest, Nature and Landscape, Department of Earth & Environmental Sciences, KU Leuven, Celestijnenlaan 200E, Box 2411, 3001, Louvain, Belgium.
| | - Philippe Nolet
- Département des Sciences naturelles, Université du Québec en Outaouais, 58 Principale, Ripon, QC, J0V 1V0, Canada.
| | - Alain Paquette
- Centre for Forest Research (CFR), Université du Québec à Montréal (UQM), P.O. Box 8888, Centre-ville Station, Montréal, QC, H3C 3P8, Canada.
| | - John Parker
- Smithsonian Environmental Research Center, 647 Contees Wharf Road, Edgewater, MD, 21037, USA.
| | - Mike Perring
- Forest & Nature Lab, Department of Forest and Water Management, Ghent University, Geraardsbergsesteenweg 267, 9090, Melle-Gontrode, Belgium.
- Ecosystem Restoration and Intervention Ecology Research Group, School of Plant Biology, The University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia.
| | - Quentin Ponette
- Earth and Life Institute - Environmental Sciences, Université Catholique de Louvain (UCL), Croix du Sud 2, Box L7.05.09, 1348, Louvain-la-Neuve, Belgium.
| | - Catherine Potvin
- Department of Biology, McGill University, 1205 Dr Penfield, Montréal, QC, H3A-1B1, Canada.
- Smithsonian Tropical Research Institute, Panama, USA.
| | - Peter Reich
- Department of Forest Resources, University of Minnesota, 1530 Cleveland Avenue North, St Paul, MN, 55108, USA.
- Hawkesbury Institute for the Environment, University of Western Sydney, Penrith, NSW, 2753, Australia.
| | - Andy Smith
- School of Environment, Natural Resources and Geography, Bangor University, Thoday Building, Bangor, LL57 2UW, Gwynedd, UK.
| | - Martin Weih
- Department of Crop Production Ecology, Swedish University of Agricultural Sciences, PO Box 7043, 750 07, Uppsala, Sweden.
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47
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Guevara JE, Damasco G, Baraloto C, Fine PVA, Peñuela MC, Castilho C, Vincentini A, Cárdenas D, Wittmann F, Targhetta N, Phillips O, Stropp J, Amaral I, Maas P, Monteagudo A, Jimenez EM, Thomas R, Brienen R, Duque Á, Magnusson W, Ferreira C, Honorio E, Almeida Matos F, Arevalo FR, Engel J, Petronelli P, Vasquez R, Steege H. Low Phylogenetic Beta Diversity and Geographic Neo‐endemism in Amazonian White‐sand Forests. Biotropica 2016. [DOI: 10.1111/btp.12298] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Juan Ernesto Guevara
- Department of Integrative Biology University of California Berkeley CA 94720‐3140 U.S.A
- Museo Ecuatoriano de Ciencias Naturales Quito Ecuador
| | - Gabriel Damasco
- Department of Integrative Biology University of California Berkeley CA 94720‐3140 U.S.A
| | - Christopher Baraloto
- UMR Ecologie des Forêts de Guyane Institut National de la Recherche Agronomique (INRA) Kourou French Guiana
| | - Paul V. A. Fine
- Department of Integrative Biology University of California Berkeley CA 94720‐3140 U.S.A
| | | | - Carolina Castilho
- EMBRAPA Centro de Pesquisa Agroflorestal de Roraima Boa Vista Brazil
| | - Alberto Vincentini
- Instituto Nacional de Pesquisas da Amazônia‐INPA Coordenação de Pesquisas em Ecologia Manaos Brazil
| | - Dairón Cárdenas
- SINCHI Herbario Amazónico Colombiano‐COAH Calle 20 No.5‐44 Bogotá Colombia
| | - Florian Wittmann
- Department of Biochemistry Max Planck Institute for Chemistry Hahn Meitner Weg 1 55128 Mainz Germany
| | - Natalia Targhetta
- Instituto Nacional de Pesquisas da Amazônia‐INPA Coordenação de Pesquisas em Ecologia Manaos Brazil
| | | | - Juliana Stropp
- Institute of Biological and Health Sciences Federal University of Alagoas Maceió AL Brazil
| | - Ieda Amaral
- Instituto Nacional de Pesquisas da Amazônia–INPA Projeto TEAM‐Manaus Manaus Brazil
| | - Paul Maas
- Department of Botany Naturalis Biodiversity Center Leiden The Netherlands
| | - Abel Monteagudo
- Missouri Botanical Garden 4344 Shaw Blvd. St. Louis MO 63110 U.S.A
| | | | - Rachel Thomas
- Iwokrama International Programme for Rainforest Conservation 77 High Street Kingston Georgetown Guiana
| | - Roel Brienen
- School of Geography University of Leeds Leeds U.K
| | - Álvaro Duque
- Departamento de Ciencias Forestales Universidad Nacional de Colombia Medellín Colombia
| | - William Magnusson
- Instituto Nacional de Pesquisas da Amazônia‐INPA Coordenação de Pesquisas em Ecologia Manaos Brazil
| | - Cid Ferreira
- Instituto Nacional de Pesquisas da Amazônia‐INPA Coordenação de Pesquisas em Ecologia Manaos Brazil
| | - Eurídice Honorio
- Instituto de Investigaciones de la Amazonía Peruana Iquitos Peru
| | - Francisca Almeida Matos
- Instituto Nacional de Pesquisas da Amazônia‐INPA Coordenação de Pesquisas em Ecologia Manaos Brazil
| | | | - Julien Engel
- UMR Ecologie des Forêts de Guyane Institut National de la Recherche Agronomique (INRA) Kourou French Guiana
| | - Pascal Petronelli
- UMR Ecologie des Forêts de Guyane Institut National de la Recherche Agronomique (INRA) Kourou French Guiana
| | - Rodolfo Vasquez
- Missouri Botanical Garden 4344 Shaw Blvd. St. Louis MO 63110 U.S.A
| | - Hans Steege
- Naturalis Biodiversity Center Leiden the Netherlands
- Ecology and Biodiversity Group Utrecht University Utrecht The Netherlands
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48
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Lamarre GP, Amoretti DS, Baraloto C, Bénéluz F, Mesones I, Fine PV. Phylogenetic Overdispersion in Lepidoptera Communities of Amazonian White‐sand Forests. Biotropica 2016. [DOI: 10.1111/btp.12294] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Greg P.A. Lamarre
- Université Antilles‐Guyane UMR Ecologie des Forêts de Guyane Campus agronomique de Kourou 97310 Kourou French Guiana
- INRA UMR Ecologie des Forêts de Guyane Campus agronomique de Kourou 97310 Kourou French Guiana
- Société Entomologique Antilles‐Guyane (SEAG) 18 lot Amaryllis 97354 Rémire‐Montjoly French Guiana
| | - Diego Salazar Amoretti
- Department of Integrative Biology University of California 1005 Valley Life Sciences Building #3140 Berkeley CA 94720 U.S.A
| | - Christopher Baraloto
- INRA UMR Ecologie des Forêts de Guyane Campus agronomique de Kourou 97310 Kourou French Guiana
- Department of Biological Sciences International Center for Tropical Botany Florida International University Miami FL 33199 U.S.A
| | - Frédéric Bénéluz
- Société Entomologique Antilles‐Guyane (SEAG) 18 lot Amaryllis 97354 Rémire‐Montjoly French Guiana
| | - Italo Mesones
- Department of Integrative Biology University of California 1005 Valley Life Sciences Building #3140 Berkeley CA 94720 U.S.A
| | - Paul V.A. Fine
- Department of Integrative Biology University of California 1005 Valley Life Sciences Building #3140 Berkeley CA 94720 U.S.A
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49
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Fine PVA, Baraloto C. Habitat Endemism in White‐sand Forests: Insights into the Mechanisms of Lineage Diversification and Community Assembly of the Neotropical Flora. Biotropica 2016. [DOI: 10.1111/btp.12301] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Paul V. A. Fine
- Department of Integrative Biology and University and Jepson Herbaria University of California 3040 Valley Life Sciences Building #3140 Berkeley CA 94720 U.S.A
| | - Christopher Baraloto
- INRA UMR Ecologie des Forêts de Guyane 97310 Kourou French Guiana
- Department of Biological Sciences and International Center for Tropical Botany Florida International University Miami FL 33199 U.S.A
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50
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Díaz S, Kattge J, Cornelissen JHC, Wright IJ, Lavorel S, Dray S, Reu B, Kleyer M, Wirth C, Prentice IC, Garnier E, Bönisch G, Westoby M, Poorter H, Reich PB, Moles AT, Dickie J, Gillison AN, Zanne AE, Chave J, Wright SJ, Sheremet'ev SN, Jactel H, Baraloto C, Cerabolini B, Pierce S, Shipley B, Kirkup D, Casanoves F, Joswig JS, Günther A, Falczuk V, Rüger N, Mahecha MD, Gorné LD. The global spectrum of plant form and function. Nature 2015; 529:167-71. [PMID: 26700811 DOI: 10.1038/nature16489] [Citation(s) in RCA: 1000] [Impact Index Per Article: 111.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2015] [Accepted: 11/26/2015] [Indexed: 12/29/2022]
Abstract
Earth is home to a remarkable diversity of plant forms and life histories, yet comparatively few essential trait combinations have proved evolutionarily viable in today's terrestrial biosphere. By analysing worldwide variation in six major traits critical to growth, survival and reproduction within the largest sample of vascular plant species ever compiled, we found that occupancy of six-dimensional trait space is strongly concentrated, indicating coordination and trade-offs. Three-quarters of trait variation is captured in a two-dimensional global spectrum of plant form and function. One major dimension within this plane reflects the size of whole plants and their parts; the other represents the leaf economics spectrum, which balances leaf construction costs against growth potential. The global plant trait spectrum provides a backdrop for elucidating constraints on evolution, for functionally qualifying species and ecosystems, and for improving models that predict future vegetation based on continuous variation in plant form and function.
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Affiliation(s)
- Sandra Díaz
- Instituto Multidisciplinario de Biología Vegetal (IMBIV), CONICET and FCEFyN, Universidad Nacional de Córdoba, Casilla de Correo 495, 5000 Córdoba, Argentina
| | - Jens Kattge
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Straße 10, 07745 Jena, Germany.,German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
| | - Johannes H C Cornelissen
- Systems Ecology, Department of Ecological Science, Vrije Universiteit, De Boelelaan 1085, 1081 HV Amsterdam, The Netherlands
| | - Ian J Wright
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
| | - Sandra Lavorel
- Laboratoire d'Ecologie Alpine, UMR 5553, CNRS - Université Grenoble Alpes, 38041 Grenoble Cedex 9, France
| | - Stéphane Dray
- Laboratoire de Biométrie et Biologie Evolutive, UMR5558, Université Lyon 1, CNRS, F-69622 Villeurbanne, France
| | - Björn Reu
- Institute of Biology, University of Leipzig, Johannisallee 21, 04103 Leipzig, Germany.,Escuela de Biología, Universidad Industrial de Santander, Cra. 27 Calle 9, 680002 Bucaramanga, Colombia
| | - Michael Kleyer
- Landscape Ecology Group, Institute of Biology and Environmental Sciences, University of Oldenburg, D-26111 Oldenburg, Germany
| | - Christian Wirth
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Straße 10, 07745 Jena, Germany.,German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.,Department of Systematic Botany and Functional Biodiversity, University of Leipzig, Johannisallee 21, 04103 Leipzig, Germany
| | - I Colin Prentice
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia.,AXA Chair in Biosphere and Climate Impacts, Grand Challenges in Ecosystems and the Environment and Grantham Institute - Climate Change and the Environment, Department of Life Sciences, Imperial College London, Silwood Park Campus, Buckhurst Road, Ascot SL5 7PY, UK
| | - Eric Garnier
- Centre d'Ecologie Fonctionnelle et Evolutive (UMR 5175), CNRS-Université de Montpellier - Université Paul-Valéry Montpellier - EPHE, 34293 Montpellier Cedex 5, France
| | - Gerhard Bönisch
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Straße 10, 07745 Jena, Germany
| | - Mark Westoby
- Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia
| | - Hendrik Poorter
- Plant Sciences (IBG-2), Forschungszentrum Jülich GmbH, D-52425 Jülich, Germany
| | - Peter B Reich
- Department of Forest Resources, University of Minnesota, St Paul, Minnesota 55108, USA.,Hawkesbury Institute for the Environment, University of Western Sydney, Penrith New South Wales 2751, Australia
| | - Angela T Moles
- Evolution &Ecology Research Centre, School of Biological, Earth and Environmental Sciences, UNSW Australia, Sydney, New South Wales 2052, Australia
| | - John Dickie
- Collections , The Royal Botanic Gardens Kew, Wakehurst Place, Ardingly, West Sussex, RH17 6TN, UK
| | - Andrew N Gillison
- Center for Biodiversity Management, P.O. Box 120, Yungaburra, Queensland 4884, Australia
| | - Amy E Zanne
- Department of Biological Sciences, George Washington University, Washington DC 20052, USA.,Center for Conservation and Sustainable Development, Missouri Botanical Garden, St Louis, Missouri 63121, USA
| | - Jérôme Chave
- UMR 5174 Laboratoire Evolution et Diversité Biologique, CNRS &Université Paul Sabatier, Toulouse 31062, France
| | - S Joseph Wright
- Smithsonian Tropical Research Institute, Apartado 0843-03092, Balboa, Ancón, Panama
| | - Serge N Sheremet'ev
- Komarov Botanical Institute, Prof. Popov Street 2, St Petersburg 197376, Russia
| | - Hervé Jactel
- INRA, UMR1202 BIOGECO, F-33610 Cestas, France.,Université de Bordeaux, BIOGECO, UMR 1202, F-33600 Pessac, France
| | - Christopher Baraloto
- International Center for Tropical Botany, Department of Biological Sciences, Florida International University, Miami, Florida 33199, USA.,INRA, UMR Ecologie des Forêts de Guyane, 97310 Kourou, French Guiana
| | - Bruno Cerabolini
- Department of Theoretical and Applied Sciences, University of Insubria, Via J.H. Dunant 3, I-21100 Varese, Italy
| | - Simon Pierce
- Department of Agricultural and Environmental Sciences (DiSAA), University of Milan, Via G. Celoria 2, I-20133 Milan, Italy
| | - Bill Shipley
- Département de biologie, Université de Sherbrooke, Sherbrooke, Quebec J1K 2R1, Canada
| | - Donald Kirkup
- Biodiversity Informatics and Spatial Analysis, Jodrell Building, The Royal Botanic Gardens Kew, Richmond TW9 3AB, UK
| | - Fernando Casanoves
- Unidad de Bioestadística, Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), 7170 Turrialba, 30501, Costa Rica
| | - Julia S Joswig
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Straße 10, 07745 Jena, Germany
| | - Angela Günther
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Straße 10, 07745 Jena, Germany
| | - Valeria Falczuk
- Instituto Multidisciplinario de Biología Vegetal (IMBIV), CONICET and FCEFyN, Universidad Nacional de Córdoba, Casilla de Correo 495, 5000 Córdoba, Argentina
| | - Nadja Rüger
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.,Smithsonian Tropical Research Institute, Apartado 0843-03092, Balboa, Ancón, Panama
| | - Miguel D Mahecha
- Max Planck Institute for Biogeochemistry, Hans-Knöll-Straße 10, 07745 Jena, Germany.,German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
| | - Lucas D Gorné
- Instituto Multidisciplinario de Biología Vegetal (IMBIV), CONICET and FCEFyN, Universidad Nacional de Córdoba, Casilla de Correo 495, 5000 Córdoba, Argentina
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