Biochar enhances the growth and physiological characteristics of Medicago sativa, Amaranthus caudatus and Zea mays in saline soils

Biochar is a promising solution to alleviate the negative impacts of salinity stress on agricultural production. Biochar derived from food waste effect was investigated on three plant species, Medicago sativa, Amaranthus caudatus, and Zea mays, under saline environments. The results showed that biochar improved significantly the height by 30%, fresh weight of shoot by 35% and root by 45% of all three species compared to control (saline soil without biochar adding), as well as enhanced their photosynthetic pigments and enzyme activities in soil. This positive effect varied significantly between the 3 plants highlighting the importance of the plant-biochar interactions. Thus, the application of biochar is a promising solution to enhance the growth, root morphology, and physiological characteristics of plants under salt-induced stress.

Interspecific variation in leaf traits, photosynthetic light response, and whole-plant productivity in amaranths (Amaranthus spp. L.)

Photosynthetic light response curve parameters help us understand the interspecific variation in photosynthetic traits, leaf acclimation status, carbon uptake, and plant productivity in specific environments. These parameters are also influenced by leaf traits which rely on species and growth environment. In accessions of four amaranth species (Amaranthus. hybridus, A. dubius, A. hypochondriacus, and A. cruentus), we determined variations in the net photosynthetic light response curves and leaf traits, and analysed the relationships between maximum gross photosynthetic rate, leaf traits, and whole-plant productivity. Non-rectangular hyperbolae were used for the net photosynthesis light response curves. Maximum gross photosynthetic rate (Pgmax) was the only variant parameter among the species, ranging from 22.29 to 34.21 μmol m–2 s–1. Interspecific variation existed for all the leaf traits except leaf mass per area and leaf inclination angle. Stomatal conductance, nitrogen, chlorophyll, and carotenoid contents, as well as leaf area correlated with Pgmax. Stomatal conductance and leaf nitrogen explained much of the variation in Pgmax at the leaf level. At the plant level, the slope between absolute growth rate and leaf area showed a strong linear relationship with Pgmax. Overall, A. hybridus and A. cruentus exhibited higher Pgmax at the leaf level and light use efficiency at the whole-plant level than A. dubius, and A. hypochondriacus. Thus, A. hybridus and A. cruentus tended to be more efficient with respect to carbon assimilation. These findings highlight the correlation between leaf photosynthetic characteristics, other leaf traits, and whole plant productivity in amaranths. Future studies may explore more species and accessions of Amaranthus at different locations or light environments.

Nutraceuticals, phytochemicals, and radical quenching ability of selected drought-tolerant advance lines of vegetable amaranth

BACKGROUND

Vegetable amaranth is a source of natural phytopigments and functional components of the commercial food industry for sustainable health benefits across the globe. It is guessed that recently identified amaranth (drought-tolerant) genotypes may contain ample phytopigments and phytochemicals suitable to extract juice as drinks. Hence, phytopigments and phytochemicals content of amaranth were assessed in detail for suitability as drinks to feed the phytochemicals deficient community across the globe.

RESULTS

The selected amaranth contained adequate carbohydrates, protein, moisture, and dietary fiber, phytopigments, minerals, phytochemicals including the ability to scavenge radicals. Nine flavonoids compounds were estimated in amaranth genotypes including six flavonols, one flavanol, one flavone, and one flavanone. It is the first effort in which we identified one flavonol such as myricetin, one flavanol, such as catechin, one flavone i. e., apigenin, and one flavanone, like naringenin in drought-tolerant vegetable amaranth. Across six flavonols, quercetin and rutin were the most noteworthy compounds followed by myricetin and isoquercetin. Across the accessions, AT7 and AT15 had abundant phytochemicals, and radical quenching ability including considerable proximate, nutraceuticals, and phytopigments in comparison to the accessions AT3 and AT11. AT15 demonstrated the maximum total flavonols including the highest rutin and hyperoside. AT7 showed high total flavonols including the highest quercetin, isoquercetin, myricetin, and kaempferol. The association of values revealed that studied phytopigments and phytochemicals of vegetable amaranth accessions demonstrated good radical quenching ability of 2,2-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) and 2,2- Diphenyl-1-picrylhydrazyl equivalent to Trolox.

CONCLUSIONS

These advance lines AT7 and AT15 had abundant nutraceuticals, phytopigments, and phytochemicals including radical quenching ability. These lines might significantly contribute to the promotion of health benefits and feeding the community across the globe deficit in nutraceuticals and antioxidants. Identified flavonoid compounds open the new route for pharmacological study.

Agrobacterium rhizogenes-mediated transformation of grain (Amaranthus hypochondriacus) and leafy (A. hybridus) amaranths

Transgenic A. hypochondriacus and A. hybridus roots were generated. Further, a distinct plant regeneration program via somatic embryos produced from hairy roots was established. Work was implemented to develop an optimized protocol for root genetic transformation of the three grain amaranth species and A. hybridus, their presumed ancestor. Transformation efficiency was species-specific, being higher in A. hypochondriacus and followed by A. hybridus. Amaranthus cruentus and A. caudatus remained recalcitrant. A reliable and efficient Agrobacteruim rhizogenes-mediated transformation of these species was established using cotyledon explants infected with the previously untested BVG strain. Optimal OD₆₀₀ bacterial cell densities were 0.4 and 0.8 for A. hypochondriacus and A. hybridus, respectively. Hairy roots of both amaranth species were validated by the amplification of appropriate marker genes and, when pertinent, by monitoring green fluorescent protein emission or β-glucuronidase activity. Embryogenic calli were generated from A. hypochondriacus rhizoclones. Subsequent somatic embryo maturation and germination required the activation of cytokinin signaling, osmotic stress, red light, and calcium incorporation. A crucial step to ensure the differentiation of germinating somatic embryos into plantlets was their individualization and subcultivation in 5/5 media containing 5% sucrose, 5 g/L gelrite, and 0.2 mg/L 2-isopentenyladenine (2iP) previously acidified to pH 4.0 with phosphoric acid, followed by their transfer to 5/5 + 2iP media supplemented with 100 mg/L CaCl₂. These steps were strictly red light dependent. This process represents a viable protocol for plant regeneration via somatic embryo germination from grain amaranth transgenic hairy roots. Its capacity to overcome the recalcitrance to genetic transformation characteristic of grain amaranth has the potential to significantly advance the knowledge of several unresolved biological aspects of grain amaranths.

Investigation of physiological and molecular mechanisms conferring diurnal variation in auxinic herbicide efficacy

The efficacy of auxinic herbicides, a valuable weed control tool for growers worldwide, has been shown to vary with the time of day in which applications are made. However, little is known about the mechanisms causing this phenomenon. Investigating the differential in planta behavior of these herbicides across different times of application may grant an ability to advise which properties of auxinic herbicides are desirable when applications must be made around the clock. Radiolabeled herbicide experiments demonstrated a likely increase in ATP-binding cassette subfamily B (ABCB)-mediated 2,4-D and dicamba transport in Palmer amaranth (Amaranthus palmeri S. Watson) at simulated dawn compared to mid-day, as dose response models indicated that many orders of magnitude higher concentrations of N-1-naphthylphthalamic acid (NPA) and verapamil, respectively, are required to inhibit translocation by 50% at simulated sunrise compared to mid-day. Gas chromatographic analysis displayed that ethylene evolution in A. palmeri was higher when dicamba was applied during mid-day compared to sunrise. Furthermore, it was found that inhibition of translocation via 2,3,5-triiodobenzoic acid (TIBA) resulted in an increased amount of 2,4-D-induced ethylene evolution at sunrise, and the inhibition of dicamba translocation via NPA reversed the difference in ethylene evolution across time of application. Dawn applications of these herbicides were associated with increased expression of a putative 9-cis-epoxycarotenoid dioxygenase biosynthesis gene NCED1, while there was a notable lack of trends observed across times of day and across herbicides with ACS1, encoding 1-aminocyclopropane-1-carboxylic acid synthase. Overall, this research indicates that translocation is differentially regulated via specific protein-level mechanisms across times of application, and that ethylene release, a chief phytotoxic process involved in the response to auxinic herbicides, is related to translocation. Furthermore, transcriptional regulation of abscisic acid involvement in phytotoxicity and/or translocation are suggested.

Herbicide drift exposure leads to reduced herbicide sensitivity in Amaranthus spp

While the introduction of herbicide tolerant crops provided growers new options to manage weeds, the widespread adoption of these herbicides increased the risk for herbicide spray drift to surrounding vegetation. The impact of herbicide drift in sensitive crops is extensively investigated, whereas scarce information is available on the consequences of herbicide drift in non-target plants. Weeds are often abundant in field margins and ditches surrounding agricultural landscapes. Repeated herbicide drift exposure to weeds could be detrimental to long-term management as numerous weeds evolved herbicide resistance following recurrent-selection with low herbicide rates. The objective of this study was to evaluate if glyphosate, 2,4-D, and dicamba spray drift could select Amaranthus spp. biotypes with reduced herbicide sensitivity. Palmer amaranth and waterhemp populations were recurrently exposed to herbicide drift in a wind tunnel study over two generations. Seeds from survival plants were used for the subsequent rounds of herbicide drift exposure. Progenies were subjected to herbicide dose-response studies following drift selection. Herbicide drift exposure rapidly selected for Amaranthus spp. biotypes with reduced herbicide sensitivity over two generations. Weed management programs should consider strategies to mitigate near-field spray drift and suppress the establishment of resistance-prone weeds on field borders and ditches in agricultural landscapes.

Physiological performance of glyphosate and imazamox mixtures on Amaranthus palmeri sensitive and resistant to glyphosate

The herbicides glyphosate and imazamox inhibit the biosynthetic pathway of aromatic amino acids (AAA) and branched-chain amino acids (BCAA), respectively. Both herbicides share several physiological effects in the processes triggered in plants after herbicide application that kills the plant, and mixtures of both herbicides are being used. The aim of this study was to evaluate the physiological effects in the mixture of glyphosate and imazamox in glyphosate-sensitive (GS) and -resistant (GR) populations of the troublesome weed Amaranthus palmeri. The changes detected in the physiological parameters after herbicide mixtures application were similar and even less to the changes detected after individual treatments. This pattern was detected in shikimate, amino acid and carbohydrate content, and it was independent of the EPSPS copy number, as it was detected in both populations. In the case of the transcriptional pattern of the AAA pathway after glyphosate, interesting and contrary interactions with imazamox treatment were detected for both populations; enhancement of the effect in the GS population and alleviation in the GR population. At the transcriptional level, no cross regulation between AAA and BCAA inhibitors was confirmed. This study suggests that mixtures are equally or less toxic than herbicides alone, and would implicate careful considerations when applying the herbicide mixtures.

Confirmation of 2,4-D resistance and identification of multiple resistance in a Kansas Palmer amaranth (Amaranthus palmeri) population

BACKGROUND

Amaranthus palmeri S. Wats is among the most problematic annual broadleaf weed species in the USA, including in Kansas. In late summer 2015, seeds of an A. palmeri population (MHR) that had survived field-use rates of 2,4-D were collected from Barton County, KS, USA. The main objectives were to: (i) confirm and characterize 2,4-D resistance in a MHR population; (ii) characterize the resistance profile of the MHR population in relation to a multiple herbicide-susceptible (MHS) population to glyphosate, chlorsulfuron, atrazine, mesotrione, fomesafen; and (iii) determine the effectiveness of alternative POST burndown herbicides for controlling MHR population.

RESULTS

The MHR population had 3.2-fold resistance to 2,4-D. In addition, the MHR population also exhibited multiple resistance to glyphosate (11.8-fold), chlorsulfuron (5.0-fold), atrazine (14.4-fold), and mesotrione (13.4-fold). Furthermore, the MHR population also showed reduced sensitivity to fomesafen (2.3-fold). In a separate study, dicamba with glyphosate, atrazine or fluroxypyr + 2,4-D, and paraquat alone or with atrazine, metribuzin, saflufenacil or 2,4-D provided ≥ 99% injury to the MHR population. Similarly, saflufenacil alone or with atrazine, metribuzin or 2,4-D, and glufosinate alone or with glyphosate + 2,4-D, and glyphosate + dicamba, and a premix of bicyclopyrone + atrazine + mesotrione + S-metolachlor also effectively controlled the MHR population.

CONCLUSION

This research confirms the first global case of an A. palmeri population from Kansas with multiple resistance to 2,4-D, glyphosate, chlorsulfuron, atrazine and mesotrione, and reduced sensitivity to fomesafen. Dicamba, glufosinate, paraquat, and saflufenacil alone or in tank-mixtures with PRE herbicides effectively controlled this MHR population. © 2019 Society of Chemical Industry.

Effect of ethylenediaminetetraacetic acid and biochar on Cu accumulation and subcellular partitioning in Amaranthus retroflexus L

Phytoremediation combined with amendments and stabilization technologies are two crucial methods to deal with soil contaminated with heavy metals. Copper (Cu) contamination in soil near Cu mines poses a serious threat to ecosystems and human health. This study investigated the effect of ethylenediaminetetraacetic acid (EDTA) and biochar (BC) on the accumulation and subcellular distribution of Cu in Amaranthus retroflexus L. to demonstrate the remediation mechanism of EDTA and BC at the cellular level. The role of calcium (Ca) in response to Cu stress in A. retroflexus was also elucidated. We designed a pot experiment with a randomized block of four Cu levels (0, 100, 200, 400 mg kg^-1) and three treatments (control, amendment with EDTA, and amendment with BC). The subcellular components were divided into three parts (cell walls, organelles, and soluble fraction) by differential centrifugation. The results showed that EDTA amendment significantly increased (p < 0.05) the concentrations of Cu in root cell walls and all subcellular components of stems and leaves (cell walls, organelles, and the soluble fraction). EDTA amendment significantly increased (p < 0.05) the proportion of exchangeable fraction and carbonate fraction in the soil. While BC amendment significantly decreased (p < 0.05) the concentrations of Cu in root cell walls and the root soluble fraction, it had no significant effects on Cu concentrations in the subcellular components of stems and leaves. The results revealed that EDTA mainly promoted the transfer of Cu to aboveground parts and accumulation in subcellular components of stems and leaves, while BC mainly limited Cu accumulation in root cell walls and the root soluble fraction. Ca concentrations in cell walls of roots, stems, and leaves increased as the Cu stress increased in all treatment groups, indicating that Ca plays an important role in relieving Cu toxicity in Amaranthus retroflexus L.

Salinity stress enhances color parameters, bioactive leaf pigments, vitamins, polyphenols, flavonoids and antioxidant activity in selected Amaranthus leafy vegetables

BACKGROUND

Amaranthus tricolor is a unique source of betalain (β-cyanin and β-xanthin) and a source of natural antioxidants, such as leaf pigments, vitamins, polyphenols and flavonoids in leafy vegetables. It has substantial importance for the food industry, since these compounds detoxify reactive oxygen species in humans and are involved in defense against several diseases. In addition, previous research has shown that salt stress elevates these compounds in many leafy vegetables. Therefore, we evaluated the effect of salinity stress on these compounds.

RESULTS

Three selected A. tricolor genotypes were studied under three salinity levels to evaluate the response of these compounds. Genotype, salinity stress and their interactions significantly affected all the traits studied. A significant and remarkable increase in L, a*, b*, chroma, β-cyanin, β-xanthin, betalain, total carotenoids, β-carotene, ascorbic acid, total polyphenolic content, total flavonoid content and total antioxidant capacity were observed under 50 and 100 mmol L^-1 NaCl concentrations. Bioactive leaf pigments, β-carotene, vitamin C, phenolics and flavonoids showed good antioxidant activity due to positive and significant interrelationships with total antioxidant capacity.

CONCLUSIONS

Amaranthus tricolor can tolerate salinity stress without compromising the high quality of the final product. Therefore, it could be a promising alternative crop in saline-prone areas around the globe. © 2018 Society of Chemical Industry.

The Effects of Pest-Resistant Amaranth Accessions on the Performance of the Solitary Endoparasitoid Apanteles hemara (Hymenoptera: Braconidae) Against the Amaranth Leaf-Webber Spoladea recurvalis (Lepidoptera: Crambidae)

The leaf-webber Spoladea recurvalis F. is the most devastating pest of amaranths in East Africa. Recent collaborative research in Asia and East Africa revealed one highly resistant amaranth accession (VI036227) to the pest and seven moderately resistant ones (RVI00053, VI033479, VI044437-A, VI047555-B, VI048076, VI049698, and VI056563). The solitary koinobiontic endoparasitoid Apanteles hemara Nixon has also been reported as efficient against the pest. Plant resistance to herbivores may have bottom-up effects on their parasitoids. In this study, we assessed the effects of the seven moderately resistant amaranth accessions and one susceptible accession (VI033482) on the performance of A. hemara. Except VI056563 that recorded lower parasitism rates compared to the susceptible accession, A. hemara performed well on all the other moderately resistant accessions. The longevity of the parasitoid was significantly extended on the resistant accessions compared to the susceptible one. While the parasitoid's body size, developmental time, and survival differed significantly between resistant accessions, they were similar to results obtained on the susceptible accession. Furthermore, while the parasitoid's sex ratio was male-biased in the susceptible accession, balanced sex ratios were obtained from accessions RVI00053, VI033479, VI044437-A, VI047555-B, VI048076, and VI049698. Significant nonreproductive host larval mortality was induced by A. hemara on all the tested accessions. These results suggest that the moderately resistant accessions can be used in combination with the endoparasitoid A. hemara to manage S. recurvalis and other amaranth leaf-webbers in the context of integrated pest management.

Molecular and physiological characterization of six-way resistance in an Amaranthus tuberculatus var. rudis biotype from Missouri

BACKGROUND

Previous research reported the first case of six-way herbicide resistance in a common waterhemp (Amaranthus tuberculatus var. rudis) biotype from Missouri, USA designated MO-Ren. This study investigated the mechanisms of multiple-resistance in the MO-Ren biotype to herbicides from six site-of-action (SOA) groups, i.e. synthetic auxins, 5-enolypyruvyl-shikimate-3-phosphate synthase (EPSPS)-, protoporphyrinogen oxidase (PPO)-, acetolactate synthase (ALS)-, photosystem II (PSII)-, and 4-hydroxyphenyl-pyruvate-dioxygenase (HPPD)-inhibitors.

RESULTS

Genomic DNA sequencing confirmed the presence of known mutations associated with ALS- or PPO-inhibiting herbicide resistance: the Trp-574-Leu amino acid substitution in the ALS enzyme and the codon deletion corresponding to the ΔG210 in the PPX2 enzyme. No target-site point mutations associated with resistance to PSII- and EPSPS-inhibitors were detected. Quantitative polymerase chain reaction (qPCR) indicated that MO-Ren plants contained five-fold more copies of the EPSPS gene than susceptible plants. Malathion in combination with 2,4-D (2,4-dichlorophenoxyacetic acid), mesotrione, and chlorimuron POST enhanced the activity of these herbicides indicating that metabolism due to cytochrome P450 monooxygenase activity was involved in herbicide resistance. 4-Chloro-7-nitrobenzofurazan (NBD-Cl), a glutathione-S-transferase (GST)-inhibitor, in combination with atrazine did not reduce the biomass accumulation. Reduced absorption or translocation of 2,4-D did not contribute to resistance. However, the resistant biotype metabolized 2,4-D, seven- to nine-fold faster than the susceptible.

CONCLUSION

Target-site point mutations, gene amplification, and elevated rates of metabolism contribute to six-way resistance in the MO-Ren biotype, suggesting both target site and non-target site mechanisms contribute to multiple herbicide resistance in this Amaranthus tuberculatus biotype. © 2018 Society of Chemical Industry.

Catalase, superoxide dismutase and ascorbate-glutathione cycle enzymes confer drought tolerance of Amaranthus tricolor

The study was performed to explore physiological, non-enzymatic and enzymatic detoxification pathways of reactive oxygen species (ROS) in tolerance of Amaranthus tricolor under drought stress. The tolerant genotype VA13 exhibited lower reduction in growth, photosynthetic pigments, relative water content (RWC) and negligible increment in electrolyte leakage (EL), lower increment in proline, guaiacol peroxidase (GPOX) activity compared to sensitive genotype VA15. This genotype also had higher catalase (CAT), superoxide dismutase (SOD), remarkable and dramatic increment in ascorbate-glutathione content, ascorbate-glutathione redox and ascorbate-glutathione cycle enzymes activity compared to sensitive genotype VA15. The negligible increment of ascorbate-glutathione content, ascorbate-glutathione redox and ascorbate-glutathione cycle enzymes activities and dramatic increment in malondialdehyde (MDA), hydrogen peroxide (H2O2) and EL were observed in the sensitive genotype VA15. SOD contributed superoxide radical dismutation and CAT contributed H2O2 detoxification in both sensitive and tolerant varieties, however, these had a great contribution in the tolerant variety. Conversely, proline and GPOX accumulation were higher in the sensitive variety compared to the tolerant variety. Increase in ascorbate-glutathione cycle enzymes activities, CAT, ascorbate-glutathione content, SOD, and ascorbate-glutathione redox clearly evident that CAT, ascorbate-glutathione cycle and SOD played a significant activity in ROS detoxification of tolerant A. tricolor variety.

Drought stress enhances nutritional and bioactive compounds, phenolic acids and antioxidant capacity of Amaranthus leafy vegetable

BACKGROUND

Bioactive compounds, vitamins, phenolic acids, flavonoids of A. tricolor are the sources of natural antioxidant that had a great importance for the food industry as these detoxify ROS in the human body. These natural antioxidants protect human from many diseases such as cancer, arthritis, emphysema, retinopathy, neuro-degenerative cardiovascular diseases, atherosclerosis and cataracts. Moreover, previous literature has shown that drought stress elevated bioactive compounds, vitamins, phenolics, flavonoids and antioxidant activity in many leafy vegetables. Hence, we study the nutritional and bioactive compounds, phenolic acids, flavonoids and antioxidant capacity of amaranth under drought stress for evaluation of the significant contribution of these compounds in the human diet.

RESULTS

The genotype VA3 was assessed at four drought stress levels that significantly affected nutritional and bioactive compounds, phenolic acids, flavonoids and antioxidant capacity. Protein, ash, energy, dietary fiber, Ca, K, Cu, S, Mg, Mn, Mo, Na, B content, total carotenoids, TFC, vitamin C, TPC, TAC (DPPH), betacarotene, TAC (ABTS+), sixteen phenolic acids and flavonoids were remarkably increased with the severity of drought stress. At moderate and severe drought stress conditions, the increments of all these components were more preponderant. Trans-cinnamic acid was newly identified phenolic acid in A. tricolor. Salicylic acid, vanilic acid, gallic acid, chlorogenic acid, Trans-cinnamic acid, rutin, isoquercetin, m-coumaric acid and p-hydroxybenzoic acid were the most abundant phenolic compounds in this genotype.

CONCLUSIONS

In A. tricolor, drought stress enhanced the quantitative and qualitative improvement of nutritional and bioactive compounds, phenolic acids, flavonoids and antioxidants. Hence, farmers of semi-arid and dry areas of the world could be able to grow amaranth as a substitute crop.

Response of edible amaranth cultivar to salt stress led to Cd mobilization in rhizosphere soil: A metabolomic analysis

The present study aimed to investigate the metabolic response of edible amaranth cultivars to salt stress and the induced rhizosphere effects on Cd mobilization in soil. Two edible amaranth cultivars (Amaranthus mangostanus L.), Quanhong (low-Cd accumulator; LC) and Liuye (high-Cd accumulator; HC), were subject to salinity treatment in both soil and hydroponic cultures. The total amount of mobilized Cd in rhizosphere soil under salinity treatment increased by 2.78-fold in LC cultivar and 4.36-fold in HC cultivar compared with controls, with 51.2% in LC cultivar and 80.5% in HC cultivar being attributed to biological mobilization of salinity. Multivariate statistical analysis generated from metabolite profiles in both rhizosphere soil and root revealed clear discrimination between control and salt treated samples. Tricarboxylic acid cycle in root was up-regulated to cope with salinity treatment, which promoted release of organic acids from root. The increased accumulation of organic acids in rhizosphere under salt stress obviously promoted soil Cd mobility. These results suggested that salinity promoted release of organic acids from root and enhanced soil Cd mobilization and accumulation in edible amaranth cultivar in soil culture.

Distribution of glyphosate-resistant Amaranthus spp. in Nebraska

BACKGROUND

Palmer amaranth (Amaranthus palmeri S. Wats.), common waterhemp (Amaranthus tuberculatus var. rudis), and redroot pigweed (Amaranthus retroflexus L.) are major weeds occurring in fields throughout Nebraska with recurrent grower complaints regarding control with glyphosate. The objective of this study was to investigate the frequency and distribution of glyphosate-resistant Palmer amaranth, common waterhemp, and redroot pigweed populations in Nebraska. The study also aimed to investigate how agronomic practices influence the occurrence of glyphosate resistance in the three Amaranthus species.

RESULTS

Glyphosate resistance was widespread in common waterhemp (81% of the screened populations), few Palmer amaranth populations were glyphosate-resistant (6% of the screened populations), whereas no glyphosate-resistant redroot pigweed populations were identified in Nebraska. Weed species, geographic region within the state, and current crop were the most important factors predicting the occurrence of glyphosate resistance in fields infested with Amaranthus species in Nebraska.

CONCLUSION

The intensive glyphosate selection pressure exerted in soybean (Glycine max) fields in eastern Nebraska is one of the major factors causing widespread occurrence of glyphosate resistance in common waterhemp in the state. The relatively low frequency of glyphosate-resistant Palmer amaranth in the state highlights the importance of the application timing and the adoption of multiple modes of action in weed management practices to delay the evolution of glyphosate resistance. © 2017 Society of Chemical Industry.

Reversing resistance to tembotrione in an Amaranthus tuberculatus (var. rudis) population from Nebraska, USA with cytochrome P450 inhibitors

BACKGROUND

A population of Amaranthus tuberculatus (var. rudis) was confirmed resistant to 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibitor herbicides (mesotrione, tembotrione, and topramezone) in a seed corn/soybean rotation in Nebraska. Further investigation confirmed a non-target-site resistance mechanism in this population. The main objective of this study was to explore the role of cytochrome P450 inhibitors in restoring the efficacy of HPPD-inhibitor herbicides on the HPPD-inhibitor resistant A. tuberculatus population from Nebraska, USA (HPPD-R).

RESULTS

Enhanced metabolism via cytochrome P450 enzymes is the mechanism of resistance in HPPD-R. Amitrole partially restored the activity of mesotrione, whereas malathion, amitrole, and piperonyl butoxide restored the activity of tembotrione and topramezone in HPPD-R. Although corn was injured through malathion followed by mesotrione application a week after treatment, the injury was transient, and the crop recovered.

CONCLUSION

The use of cytochrome P450 inhibitors with tembotrione may provide a new way of controlling HPPD-inhibitor resistant A. tuberculatus, but further research is needed to identify the cytochrome P450 candidate gene(s) conferring metabolism-based resistance. The results presented here aid to gain an insight into non-target-site resistance weed management strategies. © 2017 Society of Chemical Industry.

Rapid detoxification via glutathione S-transferase (GST) conjugation confers a high level of atrazine resistance in Palmer amaranth (Amaranthus palmeri)

BACKGROUND

Palmer amaranth (Amaranthus palmeri) is an economically troublesome, aggressive and damaging weed that has evolved resistance to six herbicide modes of action including photosystem II (PS II) inhibitors such as atrazine. The objective of this study was to investigate the mechanism and inheritance of atrazine resistance in Palmer amaranth.

RESULTS

A population of Palmer amaranth from Kansas (KSR) had a high level (160 - 198-fold more; SE ±21 - 26) of resistance to atrazine compared to the two known susceptible populations MSS and KSS, from Mississippi and Kansas, respectively. Sequence analysis of the chloroplastic psbA gene did not reveal any known mutations conferring resistance to PS II inhibitors, including the most common Ser264Gly substitution for triazine resistance. However, the KSR plants rapidly conjugated atrazine at least 24 times faster than MSS via glutathione S-transferase (GST) activity. Furthermore, genetic analyses of progeny generated from reciprocal crosses of KSR and MSS demonstrate that atrazine resistance in Palmer amaranth is a nuclear trait.

CONCLUSION

Although triazine resistance in Palmer amaranth was reported more than 20 years ago in the USA, this is the first report elucidating the underlying mechanism of resistance to atrazine. The non-target-site based metabolic resistance to atrazine mediated by GST activity may predispose the Palmer amaranth populations to have resistance to other herbicide families, and the nuclear inheritance of the trait in this dioecious species further exacerbates the propensity for its rapid spread. © 2017 Society of Chemical Industry.

Physiological and biochemical characterization of two Amaranthus species under Cr(VI) stress differing in Cr(VI) tolerance

The present study was undertaken to evaluate Cr(VI) toxicity tolerance in two Amaranthus species viz. Amaranthus viridis and Amaranthus cruentus exposed to hexavalent chromium [Cr(VI)] stress. To ascertain this, both Amaranthus species were grown under various concentrations (0, 10 and 50 μM) of Cr(VI) in the hydroponic system. After 7 days of Cr(VI) treatment, various traits such as growth, Cr accumulation, photochemistry of photosystem II (PS II) (JIP-test), oxidative stress and antioxidant defense system were analyzed. Cr(VI) treatments caused inhibition in growth and PS II photochemistry, which was accompanied with increased accumulation of Cr that results into enhanced generation of reactive oxygen species (ROS): O₂^- and H₂O₂, which subsequently induced the peroxidation of lipids and leakage of electrolyte in both the Amaranthus species. Cr(VI) accumulation, lipid peroxidation and electrolyte leakage were more pronounced in A. viridis than in A. cruentus. On the other hand, A. cruentus seedlings showed higher activities of enzymatic antioxidants: SOD, POD, CAT and GST, and non-enzymatic antioxidants: cysteine and non-protein thiols (NP-SH) levels than A. viridis. The overall results suggest that A. cruentus is more tolerant than A. viridis due to its higher antioxidant defense system that protected seedlings under Cr(VI) stress.

Reevaluation of the plant "gemstones": Calcium oxalate crystals sustain photosynthesis under drought conditions

Land plants face the perpetual dilemma of using atmospheric carbon dioxide for photosynthesis and losing water vapors, or saving water and reducing photosynthesis and thus growth. The reason behind this dilemma is that this simultaneous exchange of gases is accomplished through the same minute pores on leaf surfaces, called stomata. In a recent study we provided evidence that pigweed, an aggressive weed, attenuates this problem exploiting large crystals of calcium oxalate as dynamic carbon pools. This plant is able to photosynthesize even under drought conditions, when stomata are closed and water losses are limited, using carbon dioxide from crystal decomposition instead from the atmosphere. Abscisic acid, an alarm signal that causes stomatal closure seems to be implicated in this function and for this reason we named this path "alarm photosynthesis." The so-far "enigmatic," but highly conserved and widespread among plant species calcium oxalate crystals seem to play a crucial role in the survival of plants.

Drought-tolerant Streptomyces pactum Act12 assist phytoremediation of cadmium-contaminated soil by Amaranthus hypochondriacus: great potential application in arid/semi-arid areas

Microbe-assisted phytoremediation provides an effective approach to clean up heavy metal-contaminated soils. However, severe drought may affect the function of microbes in arid/semi-arid areas. Streptomyces pactum Act12 is a drought-tolerant soil actinomycete strain isolated from an extreme environment on the Qinghai-Tibet Plateau, China. In this study, pot experiments were conducted to assess the effect of Act12 on Cd tolerance, uptake, and accumulation in amaranth (Amaranthus hypochondriacus) under water deficit. Inoculated plants had higher Cd concentrations (root 8.7-33.9 %; shoot 53.2-102.1 %) and uptake (root 19.9-95.3 %; shoot 110.6-170.1 %) than non-inoculated controls in Cd-treated soil. The translocation factor of Cd from roots to shoots was increased by 14.2-75 % in inoculated plants, while the bioconcentration factor of Cd in roots and shoots was increased by 10.2-64.4 and 53.9-114.8 %, respectively. Moreover, inoculation with Act12 increased plant height, root length, and shoot biomass of amaranth in Cd-treated soil compared to non-inoculated controls. Physiochemical analysis revealed that Act12 enhanced Cd tolerance in the plants by increasing glutathione, elevating superoxide dismutase and catalase activities, as well as reducing malondialdehyde content in the leaves. The drought-tolerant actinomycete strain Act12 can enhance the phytoremediation efficiency of amaranth for Cd-contaminated soils under water deficit, exhibiting potential for application in arid and semi-arid areas.

The tolerance of grain amaranth (Amaranthus cruentus L.) to defoliation during vegetative growth is compromised during flowering

The biochemical processes underlying variations of tolerance are often accompanied by source-sink transitions affecting carbon (C) metabolism. We investigated the tolerance of Amaranthus cruentus L. to total mechanical defoliation through development and in different growing seasons. Defoliated A. cruentus recovered ∼80% of their above-ground biomass and ∼100% of grain yield compared to intact plants if defoliation occurred early during ontogeny, but could not compensate when defoliation occurred during flowering. Tolerance index was higher in the summer season (-0.3) than in the winter season (-0.7). Overall, defoliation tolerance was closely related to phosphoenolpyruvate carboxylase (PEPC) activity in leaves and the subsequent accumulation of starch (∼500 μmol/gDW) and sucrose (∼140 μmol/gDW) in stems and roots. Thus, A. cruentus accumulated sufficient C in roots and stem to allow branching and shoot re-growth after defoliation, but it only possessed sufficient C reserves to maintain <19% seed yield in the absence of new vegetative tissue. Seed size was larger during the warm season but it was not affected by foliar damage. Seed chemical composition was altered by defoliation at flowering. We conclude that A. cruentus defoliation tolerance depends on both, the re-allocation of starch from stem and roots, and the activation of dormant meristems before flowering to generate new photosynthetic capacity to sustain seed filling.

Physiological and Molecular Mechanisms of Differential Sensitivity of Palmer Amaranth (Amaranthus palmeri) to Mesotrione at Varying Growth Temperatures

Herbicide efficacy is known to be influenced by temperature, however, underlying mechanism(s) are poorly understood. A marked alteration in mesotrione [a 4-hydroxyphenylpyruvate dioxygenase (HPPD) inhibitor] efficacy on Palmer amaranth (Amaranthus palmeri S. Watson) was observed when grown under low- (LT, 25/15 °C, day/night temperatures) and high (HT, 40/30° C) temperature compared to optimum (OT, 32.5/22.5 °C) temperature. Based on plant height, injury, and mortality, Palmer amaranth was more sensitive to mesotrione at LT and less sensitive at HT compared to OT (ED50 for mortality; 18.5, 52.3, and 63.7 g ai ha-1, respectively). Similar responses were observed for leaf chlorophyll index and photochemical efficiency of PSII (Fv/Fm). Furthermore, mesotrione translocation and metabolism, and HPPD expression data strongly supported such variation. Relatively more mesotrione was translocated to meristematic regions at LT or OT than at HT. Based on T50 values (time required to metabolize 50% of the 14C mesotrione), plants at HT metabolized mesotrione faster than those at LT or OT (T50; 13, 21, and 16.5 h, respectively). The relative HPPD:CPS (carbamoyl phosphate synthetase) or HPPD:β-tubulin expression in mesotrione-treated plants increased over time in all temperature regimes; however, at 48 HAT, the HPPD:β-tubulin expression was exceedingly higher at HT compared to LT or OT (18.4-, 3.1-, and 3.5-fold relative to untreated plants, respectively). These findings together with an integrated understanding of other interacting key environmental factors will have important implications for a predictable approach for effective weed management.

Glyphosate-resistant and glyphosate-susceptible Palmer amaranth (Amaranthus palmeri S. Wats.): hyperspectral reflectance properties of plants and potential for classification

BACKGROUND

Palmer amaranth (Amaranthus palmeri S. Wats.) is a troublesome agronomic weed in the southern United States, and several populations have evolved resistance to glyphosate. This paper reports on spectral signatures of glyphosate-resistant (GR) and glyphosate-sensitive (GS) plants, and explores the potential of using hyperspectral sensors to distinguish GR from GS plants.

RESULTS

GS plants have higher light reflectance in the visible region and lower light reflectance in the infrared region of the spectrum compared with GR plants. The normalized reflectance spectrum of the GR and GS plants had best separability in the 400-500 nm, 650-690 nm, 730-740 nm and 800-900 nm spectral regions. Fourteen wavebands from within or near these four spectral regions provided a classification of unknown set of GR and GS plants, with a validation accuracy of 94% for greenhouse-grown plants and 96% for field-grown plants.

CONCLUSIONS

GR and GS Palmer amaranth plants have unique hyperspectral reflectance properties, and there are four distinct regions of the spectrum that can separate the GR from GS plants. These results demonstrate that hyperspectral imaging has potential application to distinguish GR from GS Palmer amaranth plants (without a glyphosate treatment), with future implications for glyphosate resistance management. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

The study of NAD-malic enzyme in Amaranthus cruentus L. under drought

Decarboxylating NAD-malate dehydrogenase (NAD-malic enzyme, NAD-ME, EC 1.1.1.39) has been investigated under a long-term drought during pre-anthesis, anthesis and seed-formation phases of ontogenesis of a NAD-ME type C4 plant Amaranthus cruentus L. using cytosol, chloroplast and mitochondrial fractions of mesophyll (M) and bundle sheath (BS) cells. We detected several molecular forms of NAD-ME with different subcellular localization patterns in the studied phases of amaranth ontogenesis. However, no enzyme activity was observed experimentally in chloroplasts of M and BS cells. In the pre-anthesis phase NAD-ME isoform with molecular weight of ∼115 kDa was found in cytosol of M and BS cells of control and drought-exposed plants. One of NAD-ME isoforms with molecular weight of 110 kDa was located in mitochondria of BS cells of control and drought-exposed plants, and a new isoform of ∼121 kDa was formed in mitochondria of BS cells under the influence of drought. After resuming watering this isoform (∼121 kDa) disappeared again. Approximately 90.6% and 9.4% of the total NAD-ME activity were localized in mitochondrial stroma and cytosol of BS cells, respectively, while in mesophyll cells 100% activity was found in cytosol fractions. The reaction catalyzed by NAD-ME follows Michaelis-Menten equation. NAD(+), l-malate and Mn(2+) activate this enzyme in mitochondria. Appearance of the ∼121 kDa isoform of NAD-ME in the mitochondrial fraction of BS cells under drought and its disappearance after resuming watering could be attributed to one of the protection functions of plants.

Inhibitory Effects of Monoterpenes on Seed Germination and Seedling Growth

Monoterpenes, the chemical constituents of essential oils found in plants, are known biologically active compounds. The present study was conducted to investigate the inhibitory effects of 30 monoterpenes including monoterpene hydrocarbons and oxygenated monoterpenes on seed germination and seedling growth of Amaranthus retroflexus, Chenopodium album and Rumex crispus under laboratory conditions. The monoterpenes were applied at contents of 10 and 20 μl for liquid compounds and 10 and 20 μg for solid compounds. The results show that most of the monoterpenes significantly inhibited seed germination and seedling growth of the tested plants. Oxygenated monoterpenes including β-citronellol, nerol and terpinen-4-ol completely inhibited seed germination and seedling growth of all tested plants. Their inhibitory effects were also stronger than that of the herbicide 2,4-D. In general, monoterpenes were less effective against seed germination and seedling growth of C. album as compared with R. crispus and A. retroflexus. Phytotoxic effects of monoterpene hydrocarbons were found to be lower than those of oxygenated monoterpenes. The alcohol derivatives of oxygenated monoterpenes were also found to be more phytotoxic as compared with their acetate derivatives. Based on the present results, it can be concluded that the oxygenated monoterpenes can be used as potential bio-herbicides.

Naphthoquinone spiroketals and organic extracts from the endophytic fungus Edenia gomezpompae as potential herbicides

From the fermentation mycelium of the endophytic fungus Edenia gomezpompae were obtained several phytotoxic compounds including two new members of the naphthoquinone spiroketal family, namely, palmarumycin EG1 (1) and preussomerin EG4 (4). In addition, preussomerins EG1-EG3 (7-9) and palmarumycins CP19 (2), CP17 (3), and CP2 (6), as well as ergosta-4,6,8(14),22-tetraen-3-one (5), were obtained. Compounds 2, 3, and 5 are new to this species. The structures of palmarumycins CP19 (2) and CP17 (3) were unambiguously determined by X-ray analysis. The isolates and mycelium organic extracts from four morphological variants of E. gomezpompae caused significant inhibition of seed germination, root elongation, and seedling respiration of Amaranthus hypochondriacus, Solanum lycopersicum, and Echinochloa crus-galli. The treatments also affected respiration on intact mitochondria isolated from spinach.

No fitness cost of glyphosate resistance endowed by massive EPSPS gene amplification in Amaranthus palmeri

Amplification of the EPSPS gene has been previously identified as the glyphosate resistance mechanism in many populations of Amaranthus palmeri, a major weed pest in US agriculture. Here, we evaluate the effects of EPSPS gene amplification on both the level of glyphosate resistance and fitness cost of resistance. A. palmeri individuals resistant to glyphosate by expressing a wide range of EPSPS gene copy numbers were evaluated under competitive conditions in the presence or absence of glyphosate. Survival rates to glyphosate and fitness traits of plants under intra-specific competition were assessed. Plants with higher amplification of the EPSPS gene (53-fold) showed high levels of glyphosate resistance, whereas less amplification of the EPSPS gene (21-fold) endowed a lower level of glyphosate resistance. Without glyphosate but under competitive conditions, plants exhibiting up to 76-fold EPSPS gene amplification exhibited similar height, and biomass allocation to vegetative and reproductive organs, compared to glyphosate susceptible A. palmeri plants with no amplification of the EPSPS gene. Both the additive effects of EPSPS gene amplification on the level of glyphosate resistance and the lack of associated fitness costs are key factors contributing to EPSPS gene amplification as a widespread and important glyphosate resistance mechanism likely to become much more evident in weed plant species.

Grain amaranths are defoliation tolerant crop species capable of utilizing stem and root carbohydrate reserves to sustain vegetative and reproductive growth after leaf loss

Tolerance to defoliation can be defined as the degree to which productivity is affected by photosynthetic area reduction. This trait was studied in grain amaranth (Amaranthus cruentus and A. hypochondriacus), which are considered to be a highly defoliation-tolerant species. The physiological and biochemical responses to increasing levels of mechanical leaf removal up to total defoliation were quantified. Tolerance appeared to be dependent on various factors: ( i) amount of lost tissue; (ii) mechanics of leaf tissue removal; (iii) environment, and (iv) species tested. Thus, grain amaranth was found to be a highly tolerant species under green-house conditions when leaf tissue loss was performed by gradual perforation. However, tolerance was compromised under similar conditions when defoliation was done by gradual cutting of the leaf. Also tolerance in completely defoliated plants tended to decrease under field conditions, where differences between A. cruentus and A. hypochondriacus were observed. All non-structural carbohydrate (NSC) levels were reduced in stems and roots of totally defoliated amaranths one day after treatment. Such depletion probably provided the carbon (C) resources needed to sustain the early recovery process in the absence of photosynthetic capacity. This was corroborated by shading of intact plants, which produced the same rapid and drastic reduction of NSC levels in these tissues. These results emphasize the role of stored NSCs, particularly starch, in buffering the impact of severe defoliation in amaranth. The fall in sucrose synthase and cell wall invertase activity observed in stems and roots soon after defoliation was consistent with their predicted shift from sink to source tissues. It is concluded that mobilization of C stores in stems and roots, is a physiologically important trait underlying tolerance to defoliation in grain amaranth.

Differential sensitivity of spinach and amaranthus to enhanced UV-B at varying soil nutrient levels: association with gas exchange, UV-B-absorbing compounds and membrane damage

The metabolic reasons associated with differential sensitivity of C3 and C4 plant species to enhanced UV-B under varying soil nutrient levels are not well understood. In the present study, spinach (Spinacia oleracea L. var All Green), a C3 and amaranthus (Amaranthus tricolor L. var Pusa Badi Chaulai), a C4 plant were subjected to enhanced UV-B (280-315 nm; 7.2 kJ m(-2) day(-1)) over ambient under varying soil nutrient levels. The nutrient amendments were recommended Nitrogen (N), Phosphorus (P), Potassium (K), 1.5× recommended NPK, 1.5× recommended N and 1.5× recommended K. Enhanced UV-B negatively affected both the species at all nutrient levels, but the reductions varied with nutrient concentration and combinations. Reductions in photosynthetic rate, stomatal conductance and chlorophyll content were significantly more in spinach compared with amaranthus. The reduction in photosynthetic rate was maximum at 1.5× recommended K and minimum in 1.5× NPK amended plants. The oxidative damage to membranes measured in terms of malondialdehyde content was significantly higher in spinach compared with amaranthus. Enhanced UV-B reduced SOD activity in both the plants except in amaranthus at 1.5× recommended K. POX activity increased under enhanced UV-B at all nutrient levels in amaranthus, but only at 1.5× K in spinach. Amaranthus had significantly higher UV-B-absorbing compounds than spinach even under UV-B stress. Lowest reductions in yield and total biomass under enhanced UV-B compared with ambient were observed in amaranthus grown at 1.5× recommended NPK. Enhanced UV-B did not significantly change the nitrogen use efficiency in amaranthus at all NPK levels, but reduced in spinach except at 1.5× K. These findings suggest that the differential sensitivity of the test species under enhanced UV-B at varying nutrient levels is due to varying antioxidative and UV-B screening capacity, and their ability to utilize nutrients. Amaranthus tolerated enhanced UV-B stress more than spinach at all nutrient levels and 1.5× recommended NPK lowered the sensitivity maximally to enhanced UV-B with respect to photosynthesis, biomass and yield. PCA score has also confirmed the lower sensitivity of amaranthus compared with spinach with respect to the measured physiological and biochemical parameters.

Can soil seed banks serve as genetic memory? A study of three species with contrasting life history strategies

We attempted to confirm that seed banks can be viewed as an important genetic reservoir by testing the hypothesis that standing (aboveground) plants represent a nonrandom sample of the seed bank. We sampled multilocus allozyme genotypes from three species with different life history strategies: Amaranthus retroflexus, Carduus acanthoides, Pastinaca sativa. In four populations of each species we analysed the extent to which allele and genotype frequencies vary in consecutive life history stages including the summer seed bank, which has been overlooked up to now. We compared the winter seed bank (i.e., seeds collected before the spring germination peak), seedlings, rosettes, the summer seed bank (i.e., seeds collected after the spring germination peak) and fruiting plants. We found that: (1) All three species partitioned most of their genetic diversity within life history stages and less among stages within populations and among populations. (2) All genetic diversity parameters, except for allele frequencies, were similar among all life history stages across all populations in different species. (3) There were differences in allele frequencies among life history stages at all localities in Amaranthus retroflexus and at three localities in both Carduus acanthoides and Pastinaca sativa. (4) Allele frequencies did not differ between the winter and summer seed bank in most Carduus acanthoides and Pastinaca sativa populations, but there was a marked difference in Amaranthus retroflexus. In conclusion, we have shown that the summer seed bank is not genetically depleted by spring germination and that a majority of genetic diversity remains in the soil through summer. We suggest that seed banks in the species investigated play an important role by maintaining genetic diversity sufficient for recovery rather than by accumulating new genetic diversity at each locality.

Analysis of gene sequences indicates that quantity not quality of chloroplast small HSPs improves thermotolerance in C4 and CAM plants

Chloroplast-localized small heat-shock proteins (Cp-sHSP) protect Photosystem II and thylakoid membranes during heat and other stresses, and Cp-sHSP production levels are related to plant thermotolerance. However, to date, a paucity of Cp-sHSP sequences from C4 or CAM species, or from other extremely heat-tolerant species, has precluded an examination to determine if Cp-sHSP genes or proteins might differ among plants with photosynthetic pathways or between heat-sensitive and heat-tolerant species. To investigate this, we isolated and characterized novel Cp-sHSP genes in four plant species: two moderately heat-tolerant C4 species, Spartina alterniflora (monocot) and Amaranthus retroflexus (eudicot), and two very heat-tolerant CAM species, Agave americana (monocot) and Ferocactus wislizenii (eudicot) (respective genes: SasHSP27.12, ArsHSP26.43, AasHSP26.85 and FwsHSP27.52) by PCR-based genome walking and cDNA RACE. Analysis of these Cp-sHSPs has confirmed the presence of conserved domains common to previously examined species. As expected, the transit peptide was found to be the most variable part of these proteins. Promoter analysis of these genes revealed differences in CAM versus C3 and C4 species that were independent of a general difference between monocots and eudicots observed for the entire protein. Heat-induced gene and protein expression indicated that Cp-sHSP protein levels were correlated with thermotolerance of photosynthetic electron transport, and that in most cases protein and transcript levels were correlated. Thus, available evidence indicates little variation in the amino acid sequence of Cp-sHSP mature proteins between heat-sensitive and -tolerant species, but that variation in Cp-sHSP protein production is related to heat tolerance or photosynthetic pathway (CAM vs. C3 and C4) and is driven by promoter differences. Key message We isolated and characterized four novel Cp-sHSP genes with promoters from wild plants, analysis has shown qualitative and quantitative interspecific variations in Cp-sHSPs of C3, C4, and CAM plant thermotolerance.

Identification of calcium stress induced genes in amaranth leaves through suppression subtractive hybridization

Calcium (Ca(2+)) is a critical ion for the growth and development of plants and plays an important role in signal transduction pathways in response to biotic and abiotic stresses. We investigated the Ca(2+) stress responsive-genes in amaranth leaves by using the suppression subtractive hybridization technique. Screening of the libraries generated 420 up-regulated transcripts and 199 down-regulated transcripts. The differentially expressed transcripts were associated with general stress response, transcription factors, gene regulation, signal transduction, and some other with unknown function. Selected genes were used to study their differential regulation by sqRT-PCR. Among the up-regulated transcripts, a fragment containing the motif of C3HC4-type RING-Zinc family was further characterized. The ORF of amaranth zinc finger protein (AhZnf) has a closer relationship with its ortholog from Ricinus communis while is distantly related to the Arabidopsis thaliana C3HC4-type ortholog. We have identified a novel putative zinc finger protein along with other novel proteins such as the wall associated kinase, phosphoinositide binding protein, and rhomboid protease involved in response to Ca(2+) stress in amaranth leaves.

Interplay of light and temperature during the in planta modulation of C4 phosphoenolpyruvate carboxylase from the leaves of Amaranthus hypochondriacus L.: diurnal and seasonal effects manifested at molecular levels

The interactive effects of light and temperature on C(4) phosphoenolpyruvate carboxylase (PEPC) were examined both in vivo and in situ using the leaves of Amaranthus hypochondriacus collected at different times during a day and in each month during the year. The maximum activity of PEPC, least inhibition by malate, and highest activation by glucose-6-phosphate were at 15.00 h during a typical day, in all the months. This peak was preceded by maximum ambient light but coincided with high temperature in the field. The highest magnitude in such responses was in the summer (e.g. May) and least in the winter (e.g. December). Light appeared to dominate in modulating the PEPC catalytic activity, whereas temperature had a strong influence on the regulatory properties, suggesting interesting molecular interactions. The molecular mechanisms involved in such interactive effects were determined by examining the PEPC protein/phosphorylation/mRNA levels. A marked diurnal rhythm could be seen in the PEPC protein levels and phosphorylation status during May (summer month). In contrast, only the phosphorylation status increased during the day in December (winter month). The mRNA peaks were not as strong as those of phosphorylation. Thus, the phosphorylation status and the protein levels of PEPC were crucial in modulating the daily and seasonal patterns in C(4) leaves in situ. This is the first detailed study on the diurnal as well as seasonal patterns in PEPC activity, its regulatory properties, protein levels, phosphorylation status, and mRNA levels, in relation to light and temperature intensities in the field.

Involvement of calcium and calmodulin in oxidative and temperature stress of Amaranthus lividus L. during early germination

Both heat and chilling caused reduction in membrane protein thiol level and increased accumulation of thiobarbituric acid reactive substances in 72 hr old germinating tissues (indicators of oxidative stress) and reduced germination and early growth performances. Calcium chelator EGTA [Ethylene glycol-bis (2-aminoethylether)-N, N,N',N, tetra acetic acid] calcium channel blocker LaCI3 (Lanthanum chloride) and calmodulin inhibitor TFP (trifluroperazine) aggravated these effects of heat and chilling and added calcium reversed them. Imposition of heat and chilling stress during early germination also causes accumulation of reactive oxygen species (ROS) like 02(-) and H2O2. Calcium treatment significantly reduced the accumulation of both the toxic ROS, while EGTA, LaCl3 and TFP treatment enhanced the accumulation. Activities of antioxidative enzymes catalase (CAT), ascorbate peroxidase (APOX) and glutathione reductase (GR) and total thiol content decreased significantly under both heat and chilling stress in germinating Amaranthus seedlings. Seedlings raised with Ca2+ treatment under heat and chilling stress exhibit higher activities of CAT7 GR and APOX and total thiol level than the untreated plants. EGTA, LaCl3 and TFP treatment, on the other hand significantly reduce the activities of all anti-oxidative enzymes and total thiol level. The work clearly supports the view that Ca2+-signalling pathway plays significant role in limiting heat and chilling induced oxidative stress by upregulating antioxidative defense during recovery phase of post-germination event in Amaranthus lividus.

Nontarget mechanims involved in glyphosate tolerance found in Canavalia ensiformis plants

A glyphosate-tolerant population of Canavalia ensiformis was collected in a cover crop in citrus orchards in Veracruz (Mexico), where glyphosate had been used for the first time. A susceptible Amaranthus hybridus L. population was collected from a nearby field that had never been treated with glyphosate. Dose-response experiments indicated a glyphosate tolerance ratio [ED(50)(C. ensiformis)/ED(50) (A. hybridus)] of 7.7. The hypothesis of a high level of glyphosate tolerance was provisionally corroborated on the basis of shikimate accumulation in both species. The susceptible population accumulated 6 times more shikimic acid in leaf tissue 96 h after glyphosate application than the tolerant leguminous crop. Two different physiological factors were involved in the glyphosate tolerance of this C. ensiformis population, which were confirmed by [(14)C]glyphosate, being a lack of penetration of glyphosate through the cuticle of the leguminous plants and an impaired herbicide translocation to the roots and the rest of shoots. This paper reports that two different nontarget site-based mechanisms, limited absorption and reduced translocation, contribute to the glyphosate tolerance found in C. ensiformis.

Rutin and total quercetin content in amaranth (Amaranthus spp.)

The aim of the study was to confirm the presence of rutin, one of the most common quercetin glycosides, and other quercetin derivatives in plants of genus Amaranthus, to investigate the influence of the species and variety on rutin distribution in the plant and content changes during growing season. The rutin content was determined by micellar electrokinetic capillary chromatography in individual plant parts at the beginning of the growth, at the flowering stage and at the maturity stage of five Amaranthus species. The total quercetin content was determined by micellar electrokinetic capillary chromatography too. The rutin content in amaranth ranged from 0.08 (in seeds) to 24.5 g/kg dry matter (in leaves). Comparison of the determined total quercetin content and the calculated content of quercetin released from rutin did not prove important presence of quercetin or other quercetin derivatives than rutin. Only amaranth leaves sampled at the maturity stage probably contained quercetin or quercetin derivatives. Significant differences in the rutin content were established among species and as well varieties. Amaranthus hybrid and A. cruentus were the best sources of rutin.

Interactive effects of elevated CO2 and growth temperature on the tolerance of photosynthesis to acute heat stress in C3 and C4 species

Determining effects of elevated CO2 on the tolerance of photosynthesis to acute heat-stress (heat wave) is necessary for predicting plant responses to global warming, as photosynthesis is thermolabile and acute heat-stress and atmospheric CO2 will increase in the future. Few studies have examined this, and past results are variable, which may be due to methodological variation. To address this, we grew two C3 and two C4 species at current or elevated CO2 and three different growth temperatures (GT). We assessed photosynthetic thermotolerance in both unacclimated (basal tolerance) and pre-heat-stressed (preHS = acclimated) plants. In C3 species, basal thermotolerance of net photosynthesis (P(n)) was increased in high CO2, but in C4 species, P(n) thermotlerance was decreased by high CO2 (except Zea mays at low GT); CO2 effects in preHS plants were mostly small or absent, though high CO2 was detrimental in one C3 and one C4 species at warmer GT. Though high CO2 generally decreased stomatal conductance, decreases in P(n) during heat stress were mostly due to non-stomatal effects. Photosystem II (PSII) efficiency was often decreased by high CO2 during heat stress, especially at high GT; CO2 effects on post-PSII electron transport were variable. Thus, high CO2 often affected photosynthetic theromotolerance, and the effects varied with photosynthetic pathway, growth temperature, and acclimation state. Most importantly, in heat-stressed plants at normal or warmer growth temperatures, high CO2 may often decrease, or not benefit as expected, tolerance of photosynthesis to acute heat stress. Therefore, interactive effects of elevated CO2 and warmer growth temperatures on acute heat tolerance may contribute to future changes in plant productivity, distribution, and diversity.

Physiological and growth responses of C3 and C4 plants to reduced temperature when grown at low CO2 of the last ice age

During the last ice age, CO2 concentration ([CO2]) was 180-200 micromol/mol compared with the modern value of 380 micromol/mol, and global temperatures were approximately 8 degrees C cooler. Relatively little is known about the responses of C3 and C4 species to long-term exposure to glacial conditions. Here Abutilon theophrasti Medik. (C3) and Amaranthus retroflexus L. (C4) were grown at 200 micromol/mol CO2 with current (30/24 degrees C) and glacial (22/16 degrees C) temperatures for 22 d. Overall, the C4 species exhibited a large growth advantage over the C3 species at low [CO2]. However, this advantage was reduced at low temperature, where the C4 species produced 5 x the total mass of the C3 species versus 14 x at the high temperature. This difference was due to a reduction in C4 growth at low temperature, since the C3 species exhibited similar growth between temperatures. Physiological differences between temperatures were not detected for either species, although photorespiration/net photosynthesis was reduced in the C3 species grown at low temperature, suggesting evidence of improved carbon balance at this treatment. This system suggests that C4 species had a growth advantage over C3 species during low [CO2] of the last ice age, although concurrent reductions in temperatures may have reduced this advantage.

Direct and acclimatory responses of dark respiration and translocation to temperature

BACKGROUND AND AIMS

Accounting for the acclimation of respiration of plants to temperature remains a major problem in analysis of carbon balances of plants and ecosystems. Translocation of carbohydrates out of leaves in the dark requires energy from respiration. In this study relationships between the responses of leaf respiration and translocation to temperature are examined.

METHODS

Direct and acclimatory responses to temperature of respiration and translocation in the dark were investigated in mature leaves of soybean and amaranth. In some cases translocation from leaves was prevented by heat-girdling the phloem in the leaf petiole, or photosynthesis during the previous day was altered.

KEY RESULTS

In both species short-term increases in temperature early in the dark period led to exponential increases in rates of respiration. However, respiration rates decreased toward the end of the dark period at higher temperatures. Stopping translocation largely prevented this decrease in respiration, suggesting that the decrease in respiration was due to low availability of substrates. In soybean, translocation also increased with temperature, and both respiration and translocation fully acclimated to temperature. In amaranth, translocation in the dark was independent of temperature, and respiration did not acclimate to temperature. Respiration and translocation rates both decreased with lower photosynthesis during the previous day in the two species.

CONCLUSIONS

Substrate supply limited total night-time respiration in both species at high temperatures and following days with low photosynthesis. This resulted in an apparent acclimation of respiration to high temperatures within one night in both species. However, after long-term exposure to different temperatures there was no evidence that lack of substrates limited respiration in either species. In amaranth, respiration did not limit translocation rates over the temperature range of 20-35 degrees C.

Insecticidal plant cyclotides and related cystine knot toxins

Cyclotides are small disulphide-rich peptides found in plants from the violet (Violaceae), coffee (Rubiaceae) and cucurbit (Cucurbitaceae) families. They have the distinguishing structural features of a macrocyclic peptide backbone and a cystine knot made up of six conserved cysteine residues, which makes cyclotides exceptionally stable. Individual plants express a suite of cyclotides in a wide range of tissue types, including leaves, flowers, stems and roots and it is thought that their natural function in plants is as defence agents. This proposal is supported by their high expression levels in plants and their toxic and growth retardant activity in feeding trials against Helicoverpa spp. insect pests. This review describes the structures and activities of cyclotides with specific reference to their insecticidal activity and compares them with structurally similar cystine knot proteins from peas (Pisum sativum) and an amaranthus crop plant (Amaranthus hypocondriancus). More broadly, cystine knot proteins are common in a wide range of organisms from fungi to mammals, and it appears that this interesting structural motif has evolved independently in different organisms as a stable protein framework that has a variety of biological functions.

SHIFTS IN GRASSLAND INVASIBILITY: EFFECTS OF SOIL RESOURCES, DISTURBANCE, COMPOSITION, AND INVADER SIZE

There is an emerging recognition that invasibility is not an intrinsic community trait, but is a condition that fluctuates from interactions between environmental forces and residential characters. Elucidating the spatiotemporal complexities of invasion requires inclusion of multiple, ecologically variable factors within communities of differing structure. Water and nutrient amendments, disturbance, and local composition affect grassland invasibility but no study has simultaneously integrated these, despite evidence that they frequently interact. Using a split-plot factorial design, we tested the effects of these factors on the invasibility of C3 pasture communities by smooth pigweed Amaranthus hybridus L., a problematic C4 forb. We sowed seeds and transplanted 3-week old seedlings of A. hybridus into plots containing monocultures and mixtures of varying composition, subjected plots to water, soil disturbance, and synthetic bovine urine (SBU) treatments, and measured A. hybridus emergence, recruitment, and growth rate. Following SBU addition, transplanted seedling growth increased in all plots but differed among legume and nonlegume monocultures and mixtures of these plant types. However, SBU decreased the number and recruitment rate of emerged seedlings because high residential growth reduced light availability. Nutrient pulses can therefore have strong but opposing effects on invasibility, depending on when they coincide with particular life history stages of an invader. Indeed, in SBU-treated plots, small differences in height of transplanted seedlings early on produced large differences in their final biomass. All facilitative effects of small-scale disturbance on invasion success diminished when productivity-promoting factors were present, suggesting that disturbance patch size is important. Precipitation-induced invasion resistance of C3 pastures by a C4 invader was partly supported. In grazed grasslands, these biotic and environmental factors vary across scales and interact in complex ways to affect invasibility, thus a dynamic patch mosaic of differential invasion resistance likely occurs in single fields. We propose that disturbance patch size, grazing intensity, soil resource availability, and resident composition are inextricably linked to grassland invasions and comment on the utility of community attributes as reliable predictors of invasibility. Lastly, we suggest temporal as well as spatial coincidences of multiple invasion facilitators dictate the window of opportunity for invasion.

Effects of growth light and nitrogen nutrition on the organization of the photosynthetic apparatus in leaves of a C4 plant, Amaranthus cruentus

Properties of C4 photosynthesis were examined in Amaranthus cruentus L. (NAD-malic enzyme (ME) subtype, dicot) grown under different light and nitrogen (N) conditions, from the viewpoint of N investment into their photosynthetic components. In low-light (LL) leaves, chlorophyll content per leaf area was greater and chlorophyll alb ratio was lower than in high-light (HL) leaves. These indicate that LL leaves invest more N into their light-harvesting systems. However, this N investment did not contribute to the increase in the quantum yield of photosynthesis on the incident photon flux density (PFD) basis (Qi) in LL leaves. N allocation to ribulose 1,5-bisphosphate carboxylasel oxygenase (Rubisco) was significantly higher in HL-high N (HN) leaves than in other leaves. On the other hand, N allocation to C4 enzymes [phosphoenolpyruvate carboxylase (PEPC) and pyruvate Pi dikinase (PPDK)] was unaffected by the growth conditions. Maximum photosynthetic rates (Pmax) per Rubisco content were similar irrespective of the growth light treatments. Carbon isotope ratios (delta13 C) in the leaf dry matter were more negative in LL leaves than in HL leaves (LL = -19.3% per hundred, HL = -16.0% per hundred) and independent of leaf N. Vein density was highest in HL-HN leaves, and leaf thickness was unaffected by the growth light treatments. From these results, we conclude that A. cruentus leaves would not acclimate efficiently to low growth light.

A mutation in the herbicide target site acetohydroxyacid synthase produces morphological and structural alterations and reduces fitness in Amaranthus powellii

We investigated the effect of a herbicide resistance-conferring mutation on fitness in Amaranthus powellii. Morphological and histological observations were made. Growth and leaf appearance were recorded for six resistant and six susceptible populations. The competitiveness of a susceptible population was compared with that of a resistant population using a replacement series experiment. Leaves of the resistant plants were distorted and much smaller than those of susceptible plants. Additionally, they exhibited an abnormal morphological and structural pattern consisting of a mosaic of heterogeneous areas in the same leaf blade. The roots and stems had similar structures in susceptible and resistant plants, but the former were up to four times more developed. The resistant plants were slower to develop and produced 67% less biomass and 58% lower leaf area than susceptible plants. Under competitive conditions, one susceptible population outperformed one resistant population by 7-15 times. The Trp(574)Leu acetohydroxyacid synthase (AHAS) mutation appears to have considerable pleiotropic effects on the early growth and development of the plants which, in competitive conditions, greatly reduce fitness.

Interference of redroot pigweed (Amaranthus retroflexus L.) in green bean (Phaseolus vulgaris L.)

Several species of Amaranthus are known to reduce crop yields and interference with harvest throughout the Iran. In the past few years, the occurrence of some Amaranthus species including of redroot pigweed (Amaranthus retroflexus L.) increased throughout the East Azerbaijan province in Iran, supplanting all the other Amaranthus species in large areas of the region and causing concern among farmers and researchers. Green bean (Phaseolus vulgaris L.) is one of the tropical pulse crops, that C4 weeds such as redroot pigweed can cause yield loss in this crop production. In order to determine the critical period of redroot pigweed control in green bean, two experiments were conducted in Islamic Azad University of Tabriz, Iran, at 2004 and 2005. The experimental designs in both year was a randomized complete blocks with three replications. The treatments were weed-infested and weed-free in the same periods. Both year, in weed-infested experiment, redroot pigweed was seeded immediately after green bean planting and removed after 0, 2, 4, 6, 8, 10 and 14 weeks after green bean emergence (WAE). In weed-free experiment, redroot pigweed seeds were transplanted to green bean plots at 0, 2, 4, 6, 8, 10 and 14 WAE. Data were analyzed using the MSTATC software and means were compared using Duncan's Multiple Ranges Test. Regression analysis was performed to describe the relationship between green bean yield and duration of redroot pigweed interference using the REG PROCEDURE of SAS. Results indicated that the difference between years with a view to influence on all traits except stem height at the harvesting stage and pod yield at the first and second harvesting time were significant. Also, differences between treatments with a view to influence on all traits were significant. Contemporary growing of pigweed and green bean for early first month and weed interference 10 WAE had not significant effect on green bean above ground biomass. In both years, the highest green bean yield loss measured in full-season weed interference. Based on fitted equations for weed-infested (sigmoid model) and weed-free (cubic model) plots, were critical periods of weed control with 5 and 10% yield loss in 13 to 60 and 19 to 55 days after green bean emergence. Obviously, farmers with using of such experiment results could control weeds in the best time and with decreasing of herbicide use, we can move toward some purposes of the sustainable agriculture.

The effects of cover crop on weed control in collard (Brassica olerecea var acephala) and lettuce (Lactuca sativa L.)

Leafy vegetables are not very competitive and weed interference can cause considerable yield losses in collard (Brassica olerecea var acephala) and lettuce (Lactuca sativa L.). Currently there are no pre or post emergence herbicides registered for weed control in these vegetables in Turkey. For this reason, alternative weed control strategies need to be developed. Cover crop residue could represent an alternative method of weed management in these crops. Field studies were conducted in 2004 at the Black Sea Agricultural Research Institute experimental field in Samsun, Turkey. The cover crop treatments consisted of Sorghum bicolor (L.) Moench, Sorghum vulgare Pers., Vicia villosa L., Amaranthus cruentus L., Pisum sativum L. and the bare ground with no cover crop. All cover crops were seeded by hand and incorporated into the soil on 11 May, 2004. Each plot was 10 m2 (2 x 5 m) and arranged in a randomized complete block design with four replications. All cover crops were incorporated into the soil by discing on 1 September 2004 at flowering stage of the cover crops. Broadleaved weed species were dominant in the experimental area. Most cover crops established well and S. bicolor biomass was the highest. The number of weed species emerging in all treatments was different at 14 DAD (days after desiccation). Similar results were observed at 28 and 56 DAD. Treatments with Vicia villosa residues had fewer weed species and lower total weed densities than other treatments.

Resistance to herbicide and susceptibility to herbivores: environmental variation in the magnitude of an ecological trade-off

Trade-offs can maintain genetic diversity and constrain adaptation; however, their magnitude may depend on ecological factors. I considered whether resistance to the herbicide triazine in Amaranthus hybridus (Amaranthaceae) imposed the trade-off of increasing susceptibility to herbivorous insects. I grew triazine-resistant and triazine-susceptible plants under contrasting levels of light and fertilization, and quantified susceptibility to herbivores using the specialist Disonycha glabrata (Coleoptera: Chrysomelidae) and the generalist Trichoplusia ni (Lepidoptera: Noctuidae). Resistance to triazine increased susceptibility to both species of herbivorous insects, as manifested by greater feeding preference, growth, and survival of herbivores. However, these effects were more pronounced with T. ni and for plants grown under high light. My results demonstrate the presence of a trade-off between resistance to triazine and susceptibility to herbivorous insects that may in turn impose an ecologically based fitness cost, and illustrate the potential for this cost to vary across environments.

Photosynthetic and growth responses of zea mays L and four weed species following post-emergence treatments with mesotrione and atrazinet

We compared photosynthesis and growth of Zea mays L (corn) and four weed species, Setaria viridis (L) Beauv (green foxtail), Echinochloa crus-galli (L) Beauv (barnyardgrass), Abutilon theophrasti Medic (velvetleaf), and Amaranthus retroflexus L (redroot pigweed), following foliar applications with atrazine, mesotrione, or a combination of atrazine and mesotrione in two greenhouse experiments. Plant responses to the three herbicide treatments were compared with responses of untreated plants (control). Photosynthesis on day 14 and dry mass of Z mays was not reduced by any of the herbicide treatments. Photosynthesis and dry mass of E crus-galli, A retroflexus and A theophrasti were significantly reduced by mesotrione and atrazine alone and in combination. Photosynthesis on day 14 and dry mass of large Sviridis plants were not suppressed by either herbicide applied alone. The mesotrione plus atrazine treatment was the most effective treatment for grass weed control because plants did not regain photosynthetic capacity and had significantly lower dry mass. Shoot dry mass of broadleaf weeds was significantly reduced by all three herbicide treatments, except for A retroflexus treated with mesotrione alone.

Evaluation of resistance in Amaranthus quitensis Kunth populations to imazethapyr and other imidazolinones

Six populations of Amaranthus quitensis (R1, R3-R7), taken from soybean fields in Córdoba (Argentina), continuously treated with imazethapyr escaped from control with this herbicide. In order to characterize this resistance, whole plant assays were carried out using imazethapyr. Treatments were made at different doses, from 0.5 g a.i.ha(-1) to 60 g a.i.ha(-1), at 200 1 ha(-1) and 200 kPa pressure. Shoot fresh weight was mesured 21 days after treatment. The results were expressed as resistance factor (ED50(R)/ED50(S)). Different degrees of resistance were found as its shown by the respective resistance factors: R1:22.5, R3:6.5, R4:43.1, R5:8.6, R6:4, R7:5. Due to the high variability in the response to imazethapyr treatments shown in some populations, and according to previous investigations on the ALS gene that proved heterozygosity a screening was made, at the recommended dose of imazethapyr. Plants were classified according to their state, dead, alive and affected (fallen but alive). Populations 3, 6 and 7 showed an important heterozygosity. Furthermore, in order to evaluate the existance of a possible cross-resistance, the recommended doses of 4 other imidazolinones (imazametabenz, imazapyr, imazamox, imazaquin) were applied to the plants. All populations were susceptible to both imazamox and imazapyr and showed cross-resistance to imazamethabenz and imazaquin.

Photosynthesis with single-rooted Amaranthus leaves. II. Regulation of ribuelose-1,5-bisphosphate carboxylase, phosphoenolpyruvate carboxylase, NAD-malic enzyme and NAD-malate dehydrogenase and coordination between PCR and C4 photosynthetic metabolism in response to changes in the source-sink balance

We have studied source-sink relationships with a model consisting of single-rooted leaves without petioles. We previously reported that the rate of photosynthesis decreased when C4 model plants prepared from Amaranthus cruentus leaves were subjected to sink-limited conditions by exposure to continuous light for a few days. It was suggested that the inhibition is due to a coordinated decrease in the activity of ribulose-1,5-bisphosphate carboxylase (RuBPcase) and phosphoenol-pyruvate carboxylase (PEPcase), both essential enzymes for photosynthesis in C4 plants. We further investigated the mechanisms behind the decreased activity of RuBPcase, PEPcase, NAD-malic enzyme and NAD-malate dehydrogenase. The results suggested that (1) the initial activity of RuBPcase is suppressed by a lowering of the P(i) level in chloroplasts, (2) the inhibition of PEPcase is due to dephosphorylation of the enzyme via the inhibition of PEPcase kinase and PEPcase phosphatase, (3) the inhibition of NAD-malic enzyme and NAD-malate dehydrogenase is derived from the oxidation of these enzymes, and (4) some proteinous factor(s) may be involved in the inhibition of the activity of these latter three enzymes. The significance of a coordinated decrease in these enzymes in response to a change in the source-sink balance is discussed.